DNA repair protein recA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79050 AT1G79050 |
| fragaria_vesca | FvH4_1g27813 |
| malus_domestica | MD09G1277400.v1.1 MD17G1270800.v1.1 |
| prunus_persica | Prupe.3G015400_v2.0.a1 Prupe.3G015400_v2.0.a1 Prupe.3G015400_v2.0.a1 Prupe.3G015400_v2.0.a1 |
| pyrus_communis | pycom09g18680 pycom17g26930 |
| rosa_chinensis | RchiOBHm_Chr1g0376401 RchiOBHm_Chr3g0485071 RchiOBHm_Chr3g0485081 RchiOBHm_Chr3g0488901 RchiOBHm_Chr3g0488941 RchiOBHm_Chr3g0488951 RchiOBHm_Chr6g0270261 |
| rosa_laevigata | RLG00000001730 RLG00000022906 |
| rosa_multiflora | Rmu_sc0001208.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00371550 Rroxscaffold_6G00393780 |
| rosa_rugosa | Rorug03G0242300 |
| rosa_samantha | Rh2CG293500 Rh3AG266100 Rh3AG290500 Rh3BG327500 Rh3CG324800 Rh3DG323400 Rh3DG323700 Rh3DG329000 Rh5AG166700 |
| rosa_wichuraiana | Rw1G015550 Rw1G026850 Rw3G025730 Rw5G015170 Rw7G021290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 590 |
| AccI | GTMKAC | 1 cut(s) | 150 |
| AccII | CGCG | 3 cut(s) | 158, 884, 1281 |
| AciI | CCGC | 7 cut(s) | 124, 127, 156, 235, 247, 638, 858 |
| AclWI | GGATC | 1 cut(s) | 521 |
| AcsI | RAATTY | 3 cut(s) | 188, 565, 900 |
| AcuI | CTGAAG | 2 cut(s) | 47, 492 |
| AfaI | GTAC | 3 cut(s) | 790, 833, 1106 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 253, 400, 590 |
| AflII | CTTAAG | 1 cut(s) | 1159 |
| AgsI | TTSAA | 3 cut(s) | 695, 990, 1181 |
| AjnI | CCWGG | 1 cut(s) | 1100 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 687, 719 |
| Alw26I | GTCTC | 2 cut(s) | 27, 338 |
| AlwI | GGATC | 1 cut(s) | 521 |
| Ama87I | CYCGRG | 1 cut(s) | 1127 |
| AoxI | GGCC | 1 cut(s) | 391 |
| ApeKI | GCWGC | 5 cut(s) | 266, 712, 1153, 1254, 1257 |
| ApoI | RAATTY | 3 cut(s) | 188, 565, 900 |
| AspLEI | GCGC | 1 cut(s) | 212 |
| AspS9I | GGNCC | 2 cut(s) | 425, 889 |
| AsuHPI | GGTGA | 2 cut(s) | 710, 862 |
| AsuNHI | GCTAGC | 1 cut(s) | 451 |
| AvaI | CYCGRG | 1 cut(s) | 1127 |
| AvaII | GGWCC | 2 cut(s) | 425, 889 |
| BanII | GRGCYC | 1 cut(s) | 961 |
| BauI | CACGAG | 2 cut(s) | 681, 960 |
| BbsI | GAAGAC | 3 cut(s) | 944, 1122, 1302 |
| BbvI | GCAGC | 5 cut(s) | 278, 724, 1165, 1266, 1269 |
| BccI | CCATC | 2 cut(s) | 592, 1214 |
| BceAI | ACGGC | 2 cut(s) | 79, 223 |
| BciT130I | CCWGG | 1 cut(s) | 1102 |
| BcoDI | GTCTC | 2 cut(s) | 27, 338 |
| BfaI | CTAG | 5 cut(s) | 14, 452, 855, 896, 927 |
| BfmI | CTRYAG | 2 cut(s) | 612, 1151 |
| BfoI | RGCGCY | 1 cut(s) | 213 |
| BfrI | CTTAAG | 1 cut(s) | 1159 |
| BisI | GCNGC | 7 cut(s) | 127, 156, 267, 713, 1154, 1255, 1258 |
| BlsI | GCNGC | 7 cut(s) | 128, 157, 268, 714, 1155, 1256, 1259 |
| Bme1390I | CCNGG | 1 cut(s) | 1102 |
| Bme18I | GGWCC | 2 cut(s) | 425, 889 |
| BmeT110I | CYCGRG | 1 cut(s) | 1127 |
| BmgT120I | GGNCC | 2 cut(s) | 425, 889 |
| BmiI | GGNNCC | 1 cut(s) | 1099 |
| BmrFI | CCNGG | 1 cut(s) | 1102 |
| BmrI | ACTGGG | 1 cut(s) | 1055 |
| BmsI | GCATC | 2 cut(s) | 499, 1040 |
| BmtI | GCTAGC | 1 cut(s) | 455 |
| BmuI | ACTGGG | 1 cut(s) | 1055 |
| BpiI | GAAGAC | 3 cut(s) | 944, 1122, 1302 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 733, 765 |
| Bpu10I | CCTNAGC | 1 cut(s) | 631 |
| Bsa29I | ATCGAT | 1 cut(s) | 1234 |
| BsaI | GGTCTC | 1 cut(s) | 338 |
| BsaJI | CCNNGG | 1 cut(s) | 1266 |
| BsaWI | WCCGGW | 2 cut(s) | 102, 139 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 313, 324, 343, 354 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 253, 400, 590 |
| Bse1I | ACTGG | 1 cut(s) | 1050 |
| Bse3DI | GCAATG | 2 cut(s) | 499, 504 |
| BseBI | CCWGG | 1 cut(s) | 1102 |
| BseCI | ATCGAT | 1 cut(s) | 1234 |
| BseDI | CCNNGG | 1 cut(s) | 1266 |
| BseGI | GGATG | 2 cut(s) | 943, 1055 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 253, 400, 590 |
| BseMI | GCAATG | 2 cut(s) | 499, 504 |
| BseMII | CTCAG | 2 cut(s) | 645, 678 |
| BseNI | ACTGG | 1 cut(s) | 1050 |
| BseRI | GAGGAG | 2 cut(s) | 39, 48 |
| BseXI | GCAGC | 5 cut(s) | 278, 724, 1165, 1266, 1269 |
| BseYI | CCCAGC | 2 cut(s) | 782, 911 |
| BsgI | GTGCAG | 2 cut(s) | 497, 992 |
| Bsh1236I | CGCG | 3 cut(s) | 158, 884, 1281 |
| Bsh1285I | CGRYCG | 1 cut(s) | 247 |
| BshFI | GGCC | 1 cut(s) | 393 |
| BshVI | ATCGAT | 1 cut(s) | 1234 |
| BsiEI | CGRYCG | 1 cut(s) | 247 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1127 |
| BsiSI | CCGG | 2 cut(s) | 103, 140 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 253, 400, 590 |
| BsmAI | GTCTC | 2 cut(s) | 27, 338 |
| BsmI | GAATGC | 1 cut(s) | 714 |
| BsnI | GGCC | 1 cut(s) | 393 |
| Bso31I | GGTCTC | 1 cut(s) | 338 |
| BsoBI | CYCGRG | 1 cut(s) | 1127 |
| Bsp1286I | GDGCHC | 1 cut(s) | 961 |
| Bsp143I | GATC | 4 cut(s) | 373, 526, 918, 1235 |
| Bsp68I | TCGCGA | 1 cut(s) | 1281 |
| BspACI | CCGC | 7 cut(s) | 124, 127, 156, 235, 247, 638, 858 |
| BspANI | GGCC | 1 cut(s) | 393 |
| BspCNI | CTCAG | 2 cut(s) | 644, 679 |
| BspDI | ATCGAT | 1 cut(s) | 1234 |
| BspFNI | CGCG | 3 cut(s) | 158, 884, 1281 |
| BspLI | GGNNCC | 1 cut(s) | 1099 |
| BspMAI | CTGCAG | 2 cut(s) | 616, 1155 |
| BspOI | GCTAGC | 1 cut(s) | 455 |
| BspPI | GGATC | 1 cut(s) | 521 |
| BspQI | GCTCTTC | 4 cut(s) | 756, 971, 1182, 1267 |
| BspTI | CTTAAG | 1 cut(s) | 1159 |
| BspTNI | GGTCTC | 1 cut(s) | 338 |
| BsrDI | GCAATG | 2 cut(s) | 499, 504 |
| BsrI | ACTGG | 1 cut(s) | 1050 |
| BssECI | CCNNGG | 1 cut(s) | 1266 |
| BssMI | GATC | 4 cut(s) | 373, 526, 918, 1235 |
| BssSI | CACGAG | 2 cut(s) | 681, 960 |
| Bst2BI | CACGAG | 2 cut(s) | 681, 960 |
| Bst2UI | CCWGG | 1 cut(s) | 1102 |
| Bst4CI | ACNGT | 4 cut(s) | 148, 287, 620, 996 |
| Bst6I | CTCTTC | 6 cut(s) | 68, 756, 971, 1132, 1182, 1267 |
| BstAFI | CTTAAG | 1 cut(s) | 1159 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 461, 518 |
| BstC8I | GCNNGC | 5 cut(s) | 453, 519, 581, 729, 1005 |
| BstDEI | CTNAG | 2 cut(s) | 631, 687 |
| BstEII | GGTNACC | 1 cut(s) | 142 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 398 |
| BstF5I | GGATG | 2 cut(s) | 943, 1055 |
| BstFNI | CGCG | 3 cut(s) | 158, 884, 1281 |
| BstH2I | RGCGCY | 1 cut(s) | 213 |
| BstHHI | GCGC | 1 cut(s) | 212 |
| BstKTI | GATC | 4 cut(s) | 376, 529, 921, 1238 |
| BstMAI | GTCTC | 2 cut(s) | 27, 338 |
| BstMBI | GATC | 4 cut(s) | 373, 526, 918, 1235 |
| BstMCI | CGRYCG | 1 cut(s) | 247 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 123, 263, 332, 461, 518, 779 |
| BstNI | CCWGG | 1 cut(s) | 1102 |
| BstNSI | RCATGY | 1 cut(s) | 521 |
| BstPI | GGTNACC | 1 cut(s) | 142 |
| BstSCI | CCNGG | 1 cut(s) | 1100 |
| BstSFI | CTRYAG | 2 cut(s) | 612, 1151 |
| BstUI | CGCG | 3 cut(s) | 158, 884, 1281 |
| BstV1I | GCAGC | 5 cut(s) | 278, 724, 1165, 1266, 1269 |
| BstV2I | GAAGAC | 3 cut(s) | 944, 1122, 1302 |
| Bsu15I | ATCGAT | 1 cut(s) | 1234 |
| BsuRI | GGCC | 1 cut(s) | 393 |
| BsuTUI | ATCGAT | 1 cut(s) | 1234 |
| BtgZI | GCGATG | 1 cut(s) | 1262 |
| BtsCI | GGATG | 2 cut(s) | 943, 1055 |
| BtsI | GCAGTG | 1 cut(s) | 1148 |
| BtsIMutI | CAGTG | 1 cut(s) | 1148 |
| BtuMI | TCGCGA | 1 cut(s) | 1281 |
| Cac8I | GCNNGC | 5 cut(s) | 453, 519, 581, 729, 1005 |
| CfoI | GCGC | 1 cut(s) | 212 |
| Cfr13I | GGNCC | 2 cut(s) | 425, 889 |
| ClaI | ATCGAT | 1 cut(s) | 1234 |
| CpoI | CGGWCCG | 1 cut(s) | 889 |
| CseI | GACGC | 2 cut(s) | 233, 873 |
| Csp6I | GTAC | 3 cut(s) | 789, 832, 1105 |
| CspI | CGGWCCG | 1 cut(s) | 889 |
| CviAII | CATG | 3 cut(s) | 78, 461, 518 |
| CviQI | GTAC | 3 cut(s) | 789, 832, 1105 |
| DdeI | CTNAG | 2 cut(s) | 631, 687 |
| DpnI | GATC | 4 cut(s) | 375, 528, 920, 1237 |
| DpnII | GATC | 4 cut(s) | 373, 526, 918, 1235 |
| Eam1104I | CTCTTC | 6 cut(s) | 68, 756, 971, 1132, 1182, 1267 |
| EarI | CTCTTC | 6 cut(s) | 68, 756, 971, 1132, 1182, 1267 |
| Eco147I | AGGCCT | 1 cut(s) | 393 |
| Eco24I | GRGCYC | 1 cut(s) | 961 |
| Eco31I | GGTCTC | 1 cut(s) | 338 |
| Eco47I | GGWCC | 2 cut(s) | 425, 889 |
| Eco57I | CTGAAG | 2 cut(s) | 47, 492 |
| Eco88I | CYCGRG | 1 cut(s) | 1127 |
| Eco91I | GGTNACC | 1 cut(s) | 142 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 398 |
| EcoO65I | GGTNACC | 1 cut(s) | 142 |
| EcoRI | GAATTC | 1 cut(s) | 188 |
| EcoRII | CCWGG | 1 cut(s) | 1100 |
| EcoT38I | GRGCYC | 1 cut(s) | 961 |
| FaeI | CATG | 3 cut(s) | 81, 464, 521 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 720, 752, 1287, 1319 |
| FatI | CATG | 3 cut(s) | 77, 460, 517 |
| FauI | CCCGC | 2 cut(s) | 131, 242 |
| FblI | GTMKAC | 1 cut(s) | 150 |
| Fnu4HI | GCNGC | 7 cut(s) | 127, 156, 267, 713, 1154, 1255, 1258 |
| FokI | GGATG | 2 cut(s) | 950, 1062 |
| FriOI | GRGCYC | 1 cut(s) | 961 |
| Fsp4HI | GCNGC | 7 cut(s) | 127, 156, 267, 713, 1154, 1255, 1258 |
| FspBI | CTAG | 5 cut(s) | 14, 452, 855, 896, 927 |
| GlaI | GCGC | 1 cut(s) | 211 |
| GluI | GCNGC | 7 cut(s) | 127, 156, 267, 713, 1154, 1255, 1258 |
| GsaI | CCCAGC | 2 cut(s) | 786, 915 |
| HaeII | RGCGCY | 1 cut(s) | 213 |
| HaeIII | GGCC | 1 cut(s) | 393 |
| HapII | CCGG | 2 cut(s) | 103, 140 |
| HgaI | GACGC | 2 cut(s) | 233, 873 |
| HhaI | GCGC | 1 cut(s) | 212 |
| Hin1II | CATG | 3 cut(s) | 81, 464, 521 |
| Hin6I | GCGC | 1 cut(s) | 210 |
| HinP1I | GCGC | 1 cut(s) | 210 |
| HincII | GTYRAC | 1 cut(s) | 643 |
| HindII | GTYRAC | 1 cut(s) | 643 |
| HindIII | AAGCTT | 2 cut(s) | 40, 482 |
| HpaII | CCGG | 2 cut(s) | 103, 140 |
| HphI | GGTGA | 2 cut(s) | 710, 862 |
| Hpy166II | GTNNAC | 5 cut(s) | 151, 643, 789, 832, 1043 |
| Hpy188I | TCNGA | 2 cut(s) | 27, 187 |
| Hpy8I | GTNNAC | 5 cut(s) | 151, 643, 789, 832, 1043 |
| Hpy99I | CGWCG | 3 cut(s) | 100, 227, 889 |
| HpyAV | CCTTC | 2 cut(s) | 689, 1025 |
| HpyCH4III | ACNGT | 4 cut(s) | 148, 287, 620, 996 |
| HpyCH4V | TGCA | 8 cut(s) | 478, 497, 512, 614, 712, 727, 973, 1153 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 123, 263, 332, 461, 518, 779 |
| HpyF3I | CTNAG | 2 cut(s) | 631, 687 |
| Hsp92II | CATG | 3 cut(s) | 81, 464, 521 |
| HspAI | GCGC | 1 cut(s) | 210 |
| Kzo9I | GATC | 4 cut(s) | 373, 526, 918, 1235 |
| LguI | GCTCTTC | 4 cut(s) | 756, 971, 1182, 1267 |
| LmnI | GCTCC | 2 cut(s) | 105, 332 |
| Lsp1109I | GCAGC | 5 cut(s) | 278, 724, 1165, 1266, 1269 |
| LweI | GCATC | 2 cut(s) | 499, 1040 |
| MaeI | CTAG | 5 cut(s) | 14, 452, 855, 896, 927 |
| MaeIII | GTNAC | 3 cut(s) | 142, 307, 850 |
| MalI | GATC | 4 cut(s) | 375, 528, 920, 1237 |
| MboI | GATC | 4 cut(s) | 373, 526, 918, 1235 |
| MhlI | GDGCHC | 1 cut(s) | 961 |
| MluCI | AATT | 6 cut(s) | 188, 565, 864, 900, 1071, 1188 |
| MlyI | GAGTC | 4 cut(s) | 361, 751, 1044, 1292 |
| MseI | TTAA | 3 cut(s) | 282, 872, 1160 |
| MspCI | CTTAAG | 1 cut(s) | 1159 |
| MspI | CCGG | 2 cut(s) | 103, 140 |
| MspR9I | CCNGG | 1 cut(s) | 1102 |
| Mva1269I | GAATGC | 1 cut(s) | 714 |
| MvaI | CCWGG | 1 cut(s) | 1102 |
| MvnI | CGCG | 3 cut(s) | 158, 884, 1281 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 123, 263, 332, 461, 518, 779 |
| NdeII | GATC | 4 cut(s) | 373, 526, 918, 1235 |
| NheI | GCTAGC | 1 cut(s) | 451 |
| NlaIII | CATG | 3 cut(s) | 81, 464, 521 |
| NlaIV | GGNNCC | 1 cut(s) | 1099 |
| NmeAIII | GCCGAG | 1 cut(s) | 1247 |
| NmuCI | GTSAC | 1 cut(s) | 850 |
| NruI | TCGCGA | 1 cut(s) | 1281 |
| NspI | RCATGY | 1 cut(s) | 521 |
| PaeI | GCATGC | 1 cut(s) | 521 |
| PceI | AGGCCT | 1 cut(s) | 393 |
| PciSI | GCTCTTC | 4 cut(s) | 756, 971, 1182, 1267 |
| PctI | GAATGC | 1 cut(s) | 714 |
| PfeI | GAWTC | 6 cut(s) | 5, 34, 201, 230, 659, 841 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 590 |
| PkrI | GCNGC | 7 cut(s) | 128, 157, 268, 714, 1155, 1256, 1259 |
| PleI | GAGTC | 4 cut(s) | 361, 750, 1043, 1292 |
| PpsI | GAGTC | 4 cut(s) | 361, 750, 1043, 1292 |
| Psp6I | CCWGG | 1 cut(s) | 1100 |
| PspEI | GGTNACC | 1 cut(s) | 142 |
| PspFI | CCCAGC | 2 cut(s) | 782, 911 |
| PspGI | CCWGG | 1 cut(s) | 1100 |
| PspN4I | GGNNCC | 1 cut(s) | 1099 |
| PspPI | GGNCC | 2 cut(s) | 425, 889 |
| PstI | CTGCAG | 2 cut(s) | 616, 1155 |
| RruI | TCGCGA | 1 cut(s) | 1281 |
| RsaI | GTAC | 3 cut(s) | 790, 833, 1106 |
| RsaNI | GTAC | 3 cut(s) | 789, 832, 1105 |
| Rsr2I | CGGWCCG | 1 cut(s) | 889 |
| RsrII | CGGWCCG | 1 cut(s) | 889 |
| SapI | GCTCTTC | 4 cut(s) | 756, 971, 1182, 1267 |
| SaqAI | TTAA | 3 cut(s) | 282, 872, 1160 |
| SatI | GCNGC | 7 cut(s) | 127, 156, 267, 713, 1154, 1255, 1258 |
| Sau3AI | GATC | 4 cut(s) | 373, 526, 918, 1235 |
| Sau96I | GGNCC | 2 cut(s) | 425, 889 |
| SchI | GAGTC | 4 cut(s) | 361, 751, 1044, 1292 |
| ScrFI | CCNGG | 1 cut(s) | 1102 |
| SduI | GDGCHC | 1 cut(s) | 961 |
| SfaNI | GCATC | 2 cut(s) | 499, 1040 |
| SfcI | CTRYAG | 2 cut(s) | 612, 1151 |
| SinI | GGWCC | 2 cut(s) | 425, 889 |
| SmlI | CTYRAG | 1 cut(s) | 1159 |
| SmoI | CTYRAG | 1 cut(s) | 1159 |
| SphI | GCATGC | 1 cut(s) | 521 |
| Sse9I | AATT | 6 cut(s) | 188, 565, 864, 900, 1071, 1188 |
| SseBI | AGGCCT | 1 cut(s) | 393 |
| SsiI | CCGC | 7 cut(s) | 124, 127, 156, 235, 247, 638, 858 |
| SspMI | CTAG | 5 cut(s) | 14, 452, 855, 896, 927 |
| StuI | AGGCCT | 1 cut(s) | 393 |
| StyD4I | CCNGG | 1 cut(s) | 1100 |
| TaaI | ACNGT | 4 cut(s) | 148, 287, 620, 996 |
| TaqI | TCGA | 5 cut(s) | 192, 243, 353, 414, 1234 |
| TaqII | GACCGA | 1 cut(s) | 877 |
| TasI | AATT | 6 cut(s) | 188, 565, 864, 900, 1071, 1188 |
| TatI | WGTACW | 2 cut(s) | 788, 831 |
| TauI | GCSGC | 2 cut(s) | 129, 158 |
| TfiI | GAWTC | 6 cut(s) | 5, 34, 201, 230, 659, 841 |
| Tru1I | TTAA | 3 cut(s) | 282, 872, 1160 |
| Tru9I | TTAA | 3 cut(s) | 282, 872, 1160 |
| TscAI | CASTG | 1 cut(s) | 1155 |
| TseFI | GTSAC | 1 cut(s) | 850 |
| TseI | GCWGC | 5 cut(s) | 266, 712, 1153, 1254, 1257 |
| Tsp45I | GTSAC | 1 cut(s) | 850 |
| TspDTI | ATGAA | 4 cut(s) | 279, 287, 954, 1220 |
| TspGWI | ACGGA | 1 cut(s) | 881 |
| TspRI | CASTG | 1 cut(s) | 1155 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 590 |
| Vha464I | CTTAAG | 1 cut(s) | 1159 |
| VpaK11BI | GGWCC | 2 cut(s) | 425, 889 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 398 |
| XapI | RAATTY | 3 cut(s) | 188, 565, 900 |
| XbaI | TCTAGA | 1 cut(s) | 895 |
| XceI | RCATGY | 1 cut(s) | 521 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 587 |
| XmiI | GTMKAC | 1 cut(s) | 150 |
| XspI | CTAG | 5 cut(s) | 14, 452, 855, 896, 927 |