DNA repair protein recA homolog 1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79050 AT1G79050 |
| fragaria_vesca | FvH4_1g27813 |
| malus_domestica | MD09G1277400.v1.1 MD17G1270800.v1.1 |
| prunus_persica | Prupe.3G015400_v2.0.a1 Prupe.3G015400_v2.0.a1 Prupe.3G015400_v2.0.a1 Prupe.3G015400_v2.0.a1 |
| pyrus_communis | pycom09g18680 pycom17g26930 |
| rosa_chinensis | RchiOBHm_Chr1g0376401 RchiOBHm_Chr3g0485071 RchiOBHm_Chr3g0485081 RchiOBHm_Chr3g0488901 RchiOBHm_Chr3g0488941 RchiOBHm_Chr3g0488951 RchiOBHm_Chr6g0270261 |
| rosa_laevigata | RLG00000001730 RLG00000022906 |
| rosa_multiflora | Rmu_sc0001208.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00371550 Rroxscaffold_6G00393780 |
| rosa_rugosa | Rorug03G0242300 |
| rosa_samantha | Rh2CG293500 Rh3AG266100 Rh3AG290500 Rh3BG327500 Rh3CG324800 Rh3DG323400 Rh3DG323700 Rh3DG329000 Rh5AG166700 |
| rosa_wichuraiana | Rw1G015550 Rw1G026850 Rw3G025730 Rw5G015170 Rw7G021290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 674 |
| AccB1I | GGYRCC | 1 cut(s) | 554 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1045 |
| AccBSI | CCGCTC | 1 cut(s) | 99 |
| AciI | CCGC | 6 cut(s) | 83, 97, 166, 249, 811, 926 |
| AclWI | GGATC | 2 cut(s) | 440, 1024 |
| AcoI | YGGCCR | 1 cut(s) | 84 |
| AcsI | RAATTY | 1 cut(s) | 929 |
| AfaI | GTAC | 3 cut(s) | 709, 885, 1076 |
| AfeI | AGCGCT | 1 cut(s) | 62 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 509, 1045 |
| AflIII | ACRYGT | 1 cut(s) | 12 |
| AgsI | TTSAA | 8 cut(s) | 67, 74, 459, 482, 614, 724, 793, 935 |
| AjnI | CCWGG | 1 cut(s) | 813 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 606, 638, 927, 959 |
| AluBI | AGCT | 6 cut(s) | 106, 176, 207, 254, 701, 1029 |
| AluI | AGCT | 6 cut(s) | 106, 176, 207, 254, 701, 1029 |
| Alw21I | GWGCWC | 2 cut(s) | 108, 130 |
| Alw26I | GTCTC | 2 cut(s) | 589, 849 |
| AlwI | GGATC | 2 cut(s) | 440, 1024 |
| Aor51HI | AGCGCT | 1 cut(s) | 62 |
| AoxI | GGCC | 3 cut(s) | 84, 310, 911 |
| ApeKI | GCWGC | 3 cut(s) | 185, 240, 631 |
| ApoI | RAATTY | 1 cut(s) | 929 |
| AspLEI | GCGC | 3 cut(s) | 63, 245, 675 |
| AspS9I | GGNCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| AsuHPI | GGTGA | 1 cut(s) | 629 |
| AsuII | TTCGAA | 1 cut(s) | 1209 |
| AvaII | GGWCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| AxyI | CCTNAGG | 1 cut(s) | 301 |
| BanI | GGYRCC | 1 cut(s) | 554 |
| BanII | GRGCYC | 1 cut(s) | 108 |
| BauI | CACGAG | 1 cut(s) | 600 |
| Bbv12I | GWGCWC | 2 cut(s) | 108, 130 |
| BbvI | GCAGC | 3 cut(s) | 197, 252, 643 |
| BccI | CCATC | 1 cut(s) | 988 |
| BciT130I | CCWGG | 1 cut(s) | 815 |
| BclI | TGATCA | 1 cut(s) | 505 |
| BcoDI | GTCTC | 2 cut(s) | 589, 849 |
| BfaI | CTAG | 1 cut(s) | 371 |
| BfmI | CTRYAG | 1 cut(s) | 828 |
| BfoI | RGCGCY | 2 cut(s) | 64, 246 |
| BglII | AGATCT | 1 cut(s) | 548 |
| BisI | GCNGC | 4 cut(s) | 84, 186, 241, 632 |
| BlsI | GCNGC | 4 cut(s) | 85, 187, 242, 633 |
| BmcAI | AGTACT | 1 cut(s) | 1076 |
| Bme1390I | CCNGG | 1 cut(s) | 815 |
| Bme18I | GGWCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| BmgT120I | GGNCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| BmiI | GGNNCC | 4 cut(s) | 95, 556, 878, 1037 |
| BmrFI | CCNGG | 1 cut(s) | 815 |
| BmrI | ACTGGG | 1 cut(s) | 267 |
| BmsI | GCATC | 4 cut(s) | 418, 618, 701, 1129 |
| BmuI | ACTGGG | 1 cut(s) | 267 |
| BpmI | CTGGAG | 1 cut(s) | 798 |
| Bpu14I | TTCGAA | 1 cut(s) | 1209 |
| BpuEI | CTTGAG | 3 cut(s) | 200, 545, 1099 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 509, 1045 |
| Bse118I | RCCGGY | 1 cut(s) | 245 |
| Bse1I | ACTGG | 3 cut(s) | 273, 1150, 1181 |
| Bse21I | CCTNAGG | 1 cut(s) | 301 |
| Bse3DI | GCAATG | 2 cut(s) | 668, 1067 |
| BseBI | CCWGG | 1 cut(s) | 815 |
| BseGI | GGATG | 3 cut(s) | 633, 710, 1003 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 509, 1045 |
| BseMI | GCAATG | 2 cut(s) | 668, 1067 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BseNI | ACTGG | 3 cut(s) | 273, 1150, 1181 |
| BseXI | GCAGC | 3 cut(s) | 197, 252, 643 |
| BsgI | GTGCAG | 3 cut(s) | 416, 565, 911 |
| Bsh1285I | CGRYCG | 1 cut(s) | 166 |
| BshFI | GGCC | 3 cut(s) | 86, 312, 913 |
| BshNI | GGYRCC | 1 cut(s) | 554 |
| BsiEI | CGRYCG | 1 cut(s) | 166 |
| BsiHKAI | GWGCWC | 2 cut(s) | 108, 130 |
| BsiSI | CCGG | 1 cut(s) | 246 |
| BslFI | GGGAC | 1 cut(s) | 1049 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 509, 1045 |
| BsmAI | GTCTC | 2 cut(s) | 589, 849 |
| BsmBI | CGTCTC | 1 cut(s) | 849 |
| BsmFI | GGGAC | 1 cut(s) | 1049 |
| BsnI | GGCC | 3 cut(s) | 86, 312, 913 |
| Bsp119I | TTCGAA | 1 cut(s) | 1209 |
| Bsp1286I | GDGCHC | 2 cut(s) | 108, 130 |
| Bsp143I | GATC | 7 cut(s) | 445, 505, 535, 548, 562, 824, 1016 |
| BspACI | CCGC | 6 cut(s) | 83, 97, 166, 249, 811, 926 |
| BspANI | GGCC | 3 cut(s) | 86, 312, 913 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspLI | GGNNCC | 4 cut(s) | 95, 556, 878, 1037 |
| BspPI | GGATC | 2 cut(s) | 440, 1024 |
| BspQI | GCTCTTC | 1 cut(s) | 161 |
| BspT104I | TTCGAA | 1 cut(s) | 1209 |
| BspT107I | GGYRCC | 1 cut(s) | 554 |
| BsrBI | CCGCTC | 1 cut(s) | 99 |
| BsrDI | GCAATG | 2 cut(s) | 668, 1067 |
| BsrFI | RCCGGY | 1 cut(s) | 245 |
| BsrI | ACTGG | 3 cut(s) | 273, 1150, 1181 |
| BssAI | RCCGGY | 1 cut(s) | 245 |
| BssMI | GATC | 7 cut(s) | 445, 505, 535, 548, 562, 824, 1016 |
| BssSI | CACGAG | 1 cut(s) | 600 |
| Bst2BI | CACGAG | 1 cut(s) | 600 |
| Bst2UI | CCWGG | 1 cut(s) | 815 |
| Bst4CI | ACNGT | 1 cut(s) | 125 |
| Bst6I | CTCTTC | 3 cut(s) | 161, 890, 1051 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 380, 437 |
| BstBI | TTCGAA | 1 cut(s) | 1209 |
| BstC8I | GCNNGC | 4 cut(s) | 247, 500, 648, 652 |
| BstDEI | CTNAG | 2 cut(s) | 102, 301 |
| BstF5I | GGATG | 3 cut(s) | 633, 710, 1003 |
| BstH2I | RGCGCY | 2 cut(s) | 64, 246 |
| BstHHI | GCGC | 3 cut(s) | 63, 245, 675 |
| BstKTI | GATC | 7 cut(s) | 448, 508, 538, 551, 565, 827, 1019 |
| BstMAI | GTCTC | 2 cut(s) | 589, 849 |
| BstMBI | GATC | 7 cut(s) | 445, 505, 535, 548, 562, 824, 1016 |
| BstMCI | CGRYCG | 1 cut(s) | 166 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 182, 213, 246, 251, 380, 437, 660, 698 |
| BstNI | CCWGG | 1 cut(s) | 815 |
| BstNSI | RCATGY | 2 cut(s) | 16, 440 |
| BstSCI | CCNGG | 1 cut(s) | 813 |
| BstSFI | CTRYAG | 1 cut(s) | 828 |
| BstV1I | GCAGC | 3 cut(s) | 197, 252, 643 |
| BstX2I | RGATCY | 2 cut(s) | 548, 1016 |
| BstYI | RGATCY | 2 cut(s) | 548, 1016 |
| Bsu36I | CCTNAGG | 1 cut(s) | 301 |
| BsuRI | GGCC | 3 cut(s) | 86, 312, 913 |
| BtsCI | GGATG | 3 cut(s) | 633, 710, 1003 |
| BtsI | GCAGTG | 1 cut(s) | 135 |
| BtsIMutI | CAGTG | 2 cut(s) | 135, 280 |
| Cac8I | GCNNGC | 4 cut(s) | 247, 500, 648, 652 |
| CfoI | GCGC | 3 cut(s) | 63, 245, 675 |
| Cfr10I | RCCGGY | 1 cut(s) | 245 |
| Cfr13I | GGNCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| CseI | GACGC | 2 cut(s) | 13, 792 |
| Csp6I | GTAC | 3 cut(s) | 708, 884, 1075 |
| CviAII | CATG | 5 cut(s) | 13, 190, 380, 437, 509 |
| CviQI | GTAC | 3 cut(s) | 708, 884, 1075 |
| DdeI | CTNAG | 2 cut(s) | 102, 301 |
| DpnI | GATC | 7 cut(s) | 447, 507, 537, 550, 564, 826, 1018 |
| DpnII | GATC | 7 cut(s) | 445, 505, 535, 548, 562, 824, 1016 |
| EaeI | YGGCCR | 1 cut(s) | 84 |
| Eam1104I | CTCTTC | 3 cut(s) | 161, 890, 1051 |
| EarI | CTCTTC | 3 cut(s) | 161, 890, 1051 |
| EciI | GGCGGA | 2 cut(s) | 264, 800 |
| Ecl136II | GAGCTC | 1 cut(s) | 106 |
| Eco24I | GRGCYC | 1 cut(s) | 108 |
| Eco47I | GGWCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| Eco47III | AGCGCT | 1 cut(s) | 62 |
| Eco53kI | GAGCTC | 1 cut(s) | 106 |
| Eco81I | CCTNAGG | 1 cut(s) | 301 |
| EcoICRI | GAGCTC | 1 cut(s) | 106 |
| EcoRII | CCWGG | 1 cut(s) | 813 |
| EcoT22I | ATGCAT | 1 cut(s) | 694 |
| EcoT38I | GRGCYC | 1 cut(s) | 108 |
| Esp3I | CGTCTC | 1 cut(s) | 849 |
| FaeI | CATG | 5 cut(s) | 16, 193, 383, 440, 512 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 639, 671 |
| FaqI | GGGAC | 1 cut(s) | 1049 |
| FatI | CATG | 5 cut(s) | 12, 189, 379, 436, 508 |
| FbaI | TGATCA | 1 cut(s) | 505 |
| Fnu4HI | GCNGC | 4 cut(s) | 84, 186, 241, 632 |
| FokI | GGATG | 3 cut(s) | 640, 717, 1010 |
| FriOI | GRGCYC | 1 cut(s) | 108 |
| Fsp4HI | GCNGC | 4 cut(s) | 84, 186, 241, 632 |
| FspBI | CTAG | 1 cut(s) | 371 |
| FspI | TGCGCA | 1 cut(s) | 674 |
| GlaI | GCGC | 3 cut(s) | 62, 244, 674 |
| GluI | GCNGC | 4 cut(s) | 84, 186, 241, 632 |
| GsuI | CTGGAG | 1 cut(s) | 798 |
| HaeII | RGCGCY | 2 cut(s) | 64, 246 |
| HaeIII | GGCC | 3 cut(s) | 86, 312, 913 |
| HapII | CCGG | 1 cut(s) | 246 |
| HgaI | GACGC | 2 cut(s) | 13, 792 |
| HhaI | GCGC | 3 cut(s) | 63, 245, 675 |
| Hin1II | CATG | 5 cut(s) | 16, 193, 383, 440, 512 |
| Hin6I | GCGC | 3 cut(s) | 61, 243, 673 |
| HinP1I | GCGC | 3 cut(s) | 61, 243, 673 |
| HinfI | GANTC | 5 cut(s) | 143, 149, 578, 724, 760 |
| HpaII | CCGG | 1 cut(s) | 246 |
| HphI | GGTGA | 1 cut(s) | 629 |
| Hpy166II | GTNNAC | 3 cut(s) | 18, 121, 884 |
| Hpy188I | TCNGA | 3 cut(s) | 103, 148, 489 |
| Hpy188III | TCNNGA | 8 cut(s) | 179, 347, 684, 721, 764, 777, 1100, 1193 |
| Hpy8I | GTNNAC | 3 cut(s) | 18, 121, 884 |
| HpyAV | CCTTC | 5 cut(s) | 80, 220, 323, 608, 1006 |
| HpyCH4III | ACNGT | 1 cut(s) | 125 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 182, 213, 246, 251, 380, 437, 660, 698 |
| HpyF3I | CTNAG | 2 cut(s) | 102, 301 |
| Hsp92II | CATG | 5 cut(s) | 16, 193, 383, 440, 512 |
| HspAI | GCGC | 3 cut(s) | 61, 243, 673 |
| KroI | GCCGGC | 1 cut(s) | 245 |
| KroNI | GCCGGC | 1 cut(s) | 247 |
| Ksp22I | TGATCA | 1 cut(s) | 505 |
| Kzo9I | GATC | 7 cut(s) | 445, 505, 535, 548, 562, 824, 1016 |
| LguI | GCTCTTC | 1 cut(s) | 161 |
| LmnI | GCTCC | 5 cut(s) | 53, 111, 212, 251, 1130 |
| Lsp1109I | GCAGC | 3 cut(s) | 197, 252, 643 |
| LweI | GCATC | 4 cut(s) | 418, 618, 701, 1129 |
| MaeI | CTAG | 1 cut(s) | 371 |
| MaeIII | GTNAC | 3 cut(s) | 226, 769, 1183 |
| MalI | GATC | 7 cut(s) | 447, 507, 537, 550, 564, 826, 1018 |
| MbiI | CCGCTC | 1 cut(s) | 99 |
| MboI | GATC | 7 cut(s) | 445, 505, 535, 548, 562, 824, 1016 |
| MboII | GAAGA | 8 cut(s) | 148, 907, 1021, 1068, 1088, 1126, 1211, 1223 |
| MflI | RGATCY | 2 cut(s) | 548, 1016 |
| MhlI | GDGCHC | 2 cut(s) | 108, 130 |
| MluCI | AATT | 6 cut(s) | 327, 783, 864, 929, 936, 962 |
| MlyI | GAGTC | 2 cut(s) | 137, 143 |
| MmeI | TCCRAC | 1 cut(s) | 171 |
| Mph1103I | ATGCAT | 1 cut(s) | 694 |
| MreI | CGCCGGCG | 1 cut(s) | 245 |
| MroNI | GCCGGC | 1 cut(s) | 245 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1194 |
| MspI | CCGG | 1 cut(s) | 246 |
| MspR9I | CCNGG | 1 cut(s) | 815 |
| MvaI | CCWGG | 1 cut(s) | 815 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 182, 213, 246, 251, 380, 437, 660, 698 |
| NaeI | GCCGGC | 1 cut(s) | 247 |
| NdeII | GATC | 7 cut(s) | 445, 505, 535, 548, 562, 824, 1016 |
| NgoMIV | GCCGGC | 1 cut(s) | 245 |
| NlaIII | CATG | 5 cut(s) | 16, 193, 383, 440, 512 |
| NlaIV | GGNNCC | 4 cut(s) | 95, 556, 878, 1037 |
| NmeAIII | GCCGAG | 1 cut(s) | 566 |
| NmuCI | GTSAC | 1 cut(s) | 769 |
| NsbI | TGCGCA | 1 cut(s) | 674 |
| NsiI | ATGCAT | 1 cut(s) | 694 |
| NspI | RCATGY | 2 cut(s) | 16, 440 |
| NspV | TTCGAA | 1 cut(s) | 1209 |
| PciI | ACATGT | 1 cut(s) | 12 |
| PciSI | GCTCTTC | 1 cut(s) | 161 |
| PdiI | GCCGGC | 1 cut(s) | 247 |
| PfeI | GAWTC | 3 cut(s) | 578, 724, 760 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1045 |
| PkrI | GCNGC | 4 cut(s) | 85, 187, 242, 633 |
| PleI | GAGTC | 2 cut(s) | 137, 143 |
| PpsI | GAGTC | 2 cut(s) | 137, 143 |
| PscI | ACATGT | 1 cut(s) | 12 |
| Psp124BI | GAGCTC | 1 cut(s) | 108 |
| Psp6I | CCWGG | 1 cut(s) | 813 |
| PspGI | CCWGG | 1 cut(s) | 813 |
| PspN4I | GGNNCC | 4 cut(s) | 95, 556, 878, 1037 |
| PspPI | GGNCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| PsuI | RGATCY | 2 cut(s) | 548, 1016 |
| RsaI | GTAC | 3 cut(s) | 709, 885, 1076 |
| RsaNI | GTAC | 3 cut(s) | 708, 884, 1075 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1194 |
| SacI | GAGCTC | 1 cut(s) | 108 |
| SapI | GCTCTTC | 1 cut(s) | 161 |
| SatI | GCNGC | 4 cut(s) | 84, 186, 241, 632 |
| Sau3AI | GATC | 7 cut(s) | 445, 505, 535, 548, 562, 824, 1016 |
| Sau96I | GGNCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| ScaI | AGTACT | 1 cut(s) | 1076 |
| SchI | GAGTC | 2 cut(s) | 137, 143 |
| ScrFI | CCNGG | 1 cut(s) | 815 |
| SduI | GDGCHC | 2 cut(s) | 108, 130 |
| SfaNI | GCATC | 4 cut(s) | 418, 618, 701, 1129 |
| SfcI | CTRYAG | 1 cut(s) | 828 |
| SfuI | TTCGAA | 1 cut(s) | 1209 |
| SgrAI | CRCCGGYG | 1 cut(s) | 245 |
| SinI | GGWCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1194 |
| SmlI | CTYRAG | 3 cut(s) | 179, 524, 1078 |
| SmoI | CTYRAG | 3 cut(s) | 179, 524, 1078 |
| Sse9I | AATT | 6 cut(s) | 327, 783, 864, 929, 936, 962 |
| SsiI | CCGC | 6 cut(s) | 83, 97, 166, 249, 811, 926 |
| SspMI | CTAG | 1 cut(s) | 371 |
| SstI | GAGCTC | 1 cut(s) | 108 |
| StyD4I | CCNGG | 1 cut(s) | 813 |
| TaaI | ACNGT | 1 cut(s) | 125 |
| TaqI | TCGA | 5 cut(s) | 162, 261, 538, 908, 1209 |
| TasI | AATT | 6 cut(s) | 327, 783, 864, 929, 936, 962 |
| TatI | WGTACW | 2 cut(s) | 707, 1074 |
| TauI | GCSGC | 1 cut(s) | 86 |
| TfiI | GAWTC | 3 cut(s) | 578, 724, 760 |
| TscAI | CASTG | 2 cut(s) | 142, 280 |
| TseFI | GTSAC | 1 cut(s) | 769 |
| TseI | GCWGC | 3 cut(s) | 185, 240, 631 |
| Tsp45I | GTSAC | 1 cut(s) | 769 |
| TspDTI | ATGAA | 3 cut(s) | 206, 1119, 1212 |
| TspGWI | ACGGA | 1 cut(s) | 869 |
| TspRI | CASTG | 2 cut(s) | 142, 280 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1045 |
| VpaK11BI | GGWCC | 5 cut(s) | 94, 292, 344, 877, 1036 |
| XapI | RAATTY | 1 cut(s) | 929 |
| XceI | RCATGY | 2 cut(s) | 16, 440 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 506 |
| XspI | CTAG | 1 cut(s) | 371 |
| ZrmI | AGTACT | 1 cut(s) | 1076 |
| Zsp2I | ATGCAT | 1 cut(s) | 694 |