Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009428

Physical Location & Seq

Genomic Coordinates Forward (+)

1103205 .. 1104392

Gene Structure 1188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G03630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 933 bp

ATGGAGTCTAAACATGAAGAACATGTGTTATCCAAACAAAAACATGATCAAGATGTAAACAAAAAAGGTTCATTAGACGACGAAAATGGAGATGTTGAGCATAAAACGATACCTTTACAAGAAACAGAAACTGTAATTATTAACTCAGAATCACATTCAAGATTATCGTCGTCTTCGTCATCTTCGTCTTCTTCTTCTTCGTATTTATCGCCACCGAAAGATCTACCTGAAGAGGTACTAAAAGAATCATTGAATGATCCGGAGATTTCTTCACCACCTGTTCAAGTAATGGATAGAGATAACAACGGAAAATATGACCCGAATAGGATTCCATCTTCGGTTTTCGAGAGAAGCAAATCGAATGTGCCAGCTGAATGGAGCTGCACTTCGAATGAATCTCTCTTCAGTATTCATTTAGGAAACAATAGTTTCACTGGTTATGGTGGTGATTTGATGAAATCAGGTGAACTTTATAAATCCGGTGAGTTACTTGCGTATAGTCCTGGACTTCCTATGCCGCCTGTACCAGGATCGGAACCAAAACCCGTAGTCGAAGAACCGAAAGTTGTTGAATCAGATAAGGAAGAGAAAGTTGTACTAGTAGAAGAAACACATACATCATCATCAGATGAAGAAGAAGGGAAAAGAGAAAGCCATGAGAAAGAACAACATCCTGCTGTTTCTTGGAAAACTCCTACAACTTCTTACCGTTCTAACCGAAGCTCAAACAGCGCGCACTCCTTCTCTTTCCCAATTTTGGCTGGAGCTGCAAGTGATTCAAGAAAGGTAGAAACGGAGAAACAGAAGGAACAAGCAAATCAGTCACAAGAGTCACAAAAACCAGTAGCAGATGCAACAAATCAGAAGCAGTCAATGTGTAGGTGCTTCTCATGTTTTCCTCAATGTCCGTGGTGTTGTTCTTCTTGTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

310

Amino Acids

34.2

Weight (kDa)

5.07

Isoelectric Point (pI)

70.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03630
fragaria_vesca	FvH4_4g29990 FvH4_4g29990
malus_domestica	MD13G1062500.v1.1 MD16G1060800.v1.1
prunus_persica	Prupe.1G287500_v2.0.a1
pyrus_communis	pycom16g05300
rosa_chinensis	RchiOBHm_Chr4g0438271
rosa_laevigata	RLG00000006375
rosa_multiflora	Rmu_co8502665.1_g000001 Rmu_sc0011129.1_g000005
rosa_roxburghii	Rroxscaffold_5G00379360
rosa_rugosa	Rorug04G0308300 Rorug04G0308300 Rorug04G0308300 Rorug04G0308400
rosa_samantha	Rh4AG359600 Rh4BG370400 Rh4CG384600 Rh4DG365400
rosa_wichuraiana	Rw0G006420 Rw0G016360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	474
AccII	CGCG	1 cut(s)	734
AccIII	TCCGGA	1 cut(s)	259
AciI	CCGC	1 cut(s)	518
AclWI	GGATC	2 cut(s)	251, 538
AcuI	CTGAAG	2 cut(s)	249, 388
AfaI	GTAC	3 cut(s)	237, 525, 597
AfiI	CCNNNNNNNGG	2 cut(s)	527, 757
AflIII	ACRYGT	1 cut(s)	22
AgsI	TTSAA	5 cut(s)	159, 253, 284, 572, 780
AhlI	ACTAGT	1 cut(s)	598
AjnI	CCWGG	2 cut(s)	502, 526
AluBI	AGCT	4 cut(s)	371, 381, 723, 767
AluI	AGCT	4 cut(s)	371, 381, 723, 767
AlwI	GGATC	2 cut(s)	251, 538
AlwNI	CAGNNNCTG	1 cut(s)	131
Aor13HI	TCCGGA	1 cut(s)	259
ApeKI	GCWGC	2 cut(s)	381, 767
AspLEI	GCGC	2 cut(s)	734, 736
AsuHPI	GGTGA	4 cut(s)	264, 458, 476, 494
AsuII	TTCGAA	1 cut(s)	389
BbsI	GAAGAC	2 cut(s)	165, 180
BbvI	GCAGC	2 cut(s)	368, 754
BccI	CCATC	1 cut(s)	340
BciT130I	CCWGG	2 cut(s)	504, 528
BclI	TGATCA	1 cut(s)	46
BcuI	ACTAGT	1 cut(s)	598
BfaI	CTAG	1 cut(s)	599
BglII	AGATCT	1 cut(s)	220
BisI	GCNGC	3 cut(s)	382, 518, 768
BlsI	GCNGC	3 cut(s)	383, 519, 769
Bme1390I	CCNGG	2 cut(s)	504, 528
BmiI	GGNNCC	1 cut(s)	537
BmrFI	CCNGG	2 cut(s)	504, 528
BmsI	GCATC	1 cut(s)	841
BpiI	GAAGAC	2 cut(s)	165, 180
BpmI	CTGGAG	1 cut(s)	783
Bpu14I	TTCGAA	1 cut(s)	389
BsaJI	CCNNGG	1 cut(s)	908
BsaWI	WCCGGW	2 cut(s)	259, 479
Bsc4I	CCNNNNNNNGG	2 cut(s)	527, 757
Bse1I	ACTGG	2 cut(s)	439, 842
BseAI	TCCGGA	1 cut(s)	259
BseBI	CCWGG	2 cut(s)	504, 528
BseDI	CCNNGG	1 cut(s)	908
BseGI	GGATG	1 cut(s)	670
BseLI	CCNNNNNNNGG	2 cut(s)	527, 757
BseMII	CTCAG	1 cut(s)	159
BseNI	ACTGG	2 cut(s)	439, 842
BsePI	GCGCGC	1 cut(s)	732
BseXI	GCAGC	2 cut(s)	368, 754
BsgI	GTGCAG	1 cut(s)	367
Bsh1236I	CGCG	1 cut(s)	734
BsiSI	CCGG	2 cut(s)	260, 480
BslI	CCNNNNNNNGG	2 cut(s)	527, 757
Bsp119I	TTCGAA	1 cut(s)	389
Bsp13I	TCCGGA	1 cut(s)	259
Bsp143I	GATC	4 cut(s)	46, 220, 256, 530
BspACI	CCGC	1 cut(s)	518
BspCNI	CTCAG	1 cut(s)	158
BspEI	TCCGGA	1 cut(s)	259
BspFNI	CGCG	1 cut(s)	734
BspLI	GGNNCC	1 cut(s)	537
BspPI	GGATC	2 cut(s)	251, 538
BspT104I	TTCGAA	1 cut(s)	389
BsrI	ACTGG	2 cut(s)	439, 842
BssECI	CCNNGG	1 cut(s)	908
BssHII	GCGCGC	1 cut(s)	732
BssMI	GATC	4 cut(s)	46, 220, 256, 530
Bst2UI	CCWGG	2 cut(s)	504, 528
Bst4CI	ACNGT	2 cut(s)	133, 710
Bst6I	CTCTTC	3 cut(s)	225, 407, 579
BstBI	TTCGAA	1 cut(s)	389
BstC8I	GCNNGC	2 cut(s)	369, 734
BstDEI	CTNAG	1 cut(s)	145
BstDSI	CCRYGG	1 cut(s)	908
BstENI	CCTNNNNNAGG	1 cut(s)	525
BstF5I	GGATG	1 cut(s)	670
BstFNI	CGCG	1 cut(s)	734
BstHHI	GCGC	2 cut(s)	734, 736
BstKTI	GATC	4 cut(s)	49, 223, 259, 533
BstMBI	GATC	4 cut(s)	46, 220, 256, 530
BstMWI	GCNNNNNNNGC	2 cut(s)	729, 767
BstNI	CCWGG	2 cut(s)	504, 528
BstNSI	RCATGY	1 cut(s)	26
BstSCI	CCNGG	2 cut(s)	502, 526
BstUI	CGCG	1 cut(s)	734
BstV1I	GCAGC	2 cut(s)	368, 754
BstV2I	GAAGAC	2 cut(s)	165, 180
BstX2I	RGATCY	1 cut(s)	220
BstXI	CCANNNNNNTGG	1 cut(s)	375
BstYI	RGATCY	1 cut(s)	220
BtgI	CCRYGG	1 cut(s)	908
BtsCI	GGATG	1 cut(s)	670
BtsIMutI	CAGTG	1 cut(s)	432
Cac8I	GCNNGC	2 cut(s)	369, 734
CaiI	CAGNNNCTG	1 cut(s)	131
CfoI	GCGC	2 cut(s)	734, 736
Csp6I	GTAC	3 cut(s)	236, 524, 596
CspCI	CAANNNNNGTGG	2 cut(s)	890, 925
CviAII	CATG	5 cut(s)	14, 23, 44, 656, 891
CviJI	RGCY	6 cut(s)	371, 381, 654, 723, 761, 767
CviKI_1	RGCY	6 cut(s)	371, 381, 654, 723, 761, 767
CviQI	GTAC	3 cut(s)	236, 524, 596
DdeI	CTNAG	1 cut(s)	145
DpnI	GATC	4 cut(s)	48, 222, 258, 532
DpnII	GATC	4 cut(s)	46, 220, 256, 530
Eam1104I	CTCTTC	3 cut(s)	225, 407, 579
EarI	CTCTTC	3 cut(s)	225, 407, 579
Eco57I	CTGAAG	2 cut(s)	249, 388
EcoNI	CCTNNNNNAGG	1 cut(s)	525
EcoRII	CCWGG	2 cut(s)	502, 526
FaeI	CATG	5 cut(s)	17, 26, 47, 659, 894
FatI	CATG	5 cut(s)	13, 22, 43, 655, 890
FbaI	TGATCA	1 cut(s)	46
Fnu4HI	GCNGC	3 cut(s)	382, 518, 768
FokI	GGATG	1 cut(s)	657
Fsp4HI	GCNGC	3 cut(s)	382, 518, 768
FspBI	CTAG	1 cut(s)	599
GlaI	GCGC	2 cut(s)	733, 735
GluI	GCNGC	3 cut(s)	382, 518, 768
GsuI	CTGGAG	1 cut(s)	783
HapII	CCGG	2 cut(s)	260, 480
HhaI	GCGC	2 cut(s)	734, 736
Hin1II	CATG	5 cut(s)	17, 26, 47, 659, 894
Hin6I	GCGC	2 cut(s)	732, 734
HinP1I	GCGC	2 cut(s)	732, 734
HinfI	GANTC	8 cut(s)	5, 149, 245, 328, 395, 572, 776, 830
HpaII	CCGG	2 cut(s)	260, 480
HphI	GGTGA	4 cut(s)	264, 458, 476, 494
Hpy166II	GTNNAC	2 cut(s)	58, 467
Hpy188I	TCNGA	5 cut(s)	148, 535, 577, 628, 864
Hpy188III	TCNNGA	6 cut(s)	50, 159, 260, 346, 780, 930
Hpy8I	GTNNAC	2 cut(s)	58, 467
Hpy99I	CGWCG	2 cut(s)	83, 172
HpyAV	CCTTC	3 cut(s)	632, 751, 799
HpyCH4III	ACNGT	2 cut(s)	133, 710
HpyCH4V	TGCA	3 cut(s)	384, 770, 854
HpyF10VI	GCNNNNNNNGC	2 cut(s)	729, 767
HpyF3I	CTNAG	1 cut(s)	145
Hsp92II	CATG	5 cut(s)	17, 26, 47, 659, 894
HspAI	GCGC	2 cut(s)	732, 734
Kpn2I	TCCGGA	1 cut(s)	259
Ksp22I	TGATCA	1 cut(s)	46
Kzo9I	GATC	4 cut(s)	46, 220, 256, 530
LmnI	GCTCC	2 cut(s)	378, 764
Lsp1109I	GCAGC	2 cut(s)	368, 754
LweI	GCATC	1 cut(s)	841
MaeI	CTAG	1 cut(s)	599
MaeIII	GTNAC	3 cut(s)	486, 822, 831
MalI	GATC	4 cut(s)	48, 222, 258, 532
MboI	GATC	4 cut(s)	46, 220, 256, 530
MflI	RGATCY	1 cut(s)	220
MluCI	AATT	2 cut(s)	135, 753
MlyI	GAGTC	2 cut(s)	14, 839
MnlI	CCTC	2 cut(s)	226, 909
MroI	TCCGGA	1 cut(s)	259
MseI	TTAA	1 cut(s)	141
MspA1I	CMGCKG	1 cut(s)	371
MspI	CCGG	2 cut(s)	260, 480
MspR9I	CCNGG	2 cut(s)	504, 528
MvaI	CCWGG	2 cut(s)	504, 528
MvnI	CGCG	1 cut(s)	734
MwoI	GCNNNNNNNGC	2 cut(s)	729, 767
NdeII	GATC	4 cut(s)	46, 220, 256, 530
NlaIII	CATG	5 cut(s)	17, 26, 47, 659, 894
NlaIV	GGNNCC	1 cut(s)	537
NmuCI	GTSAC	2 cut(s)	822, 831
NspI	RCATGY	1 cut(s)	26
NspV	TTCGAA	1 cut(s)	389
PauI	GCGCGC	1 cut(s)	732
PciI	ACATGT	1 cut(s)	22
PcsI	WCGNNNNNNNCGW	2 cut(s)	173, 182
PfeI	GAWTC	6 cut(s)	149, 245, 328, 395, 572, 776
PfoI	TCCNGGA	1 cut(s)	502
PkrI	GCNGC	3 cut(s)	383, 519, 769
PleI	GAGTC	2 cut(s)	13, 838
PpsI	GAGTC	2 cut(s)	13, 838
PscI	ACATGT	1 cut(s)	22
PsiI	TTATAA	1 cut(s)	474
Psp6I	CCWGG	2 cut(s)	502, 526
PspGI	CCWGG	2 cut(s)	502, 526
PspN4I	GGNNCC	1 cut(s)	537
PstNI	CAGNNNCTG	1 cut(s)	131
PsuI	RGATCY	1 cut(s)	220
PteI	GCGCGC	1 cut(s)	732
PvuII	CAGCTG	1 cut(s)	371
RsaI	GTAC	3 cut(s)	237, 525, 597
RsaNI	GTAC	3 cut(s)	236, 524, 596
SaqAI	TTAA	1 cut(s)	141
SatI	GCNGC	3 cut(s)	382, 518, 768
Sau3AI	GATC	4 cut(s)	46, 220, 256, 530
SchI	GAGTC	2 cut(s)	14, 839
ScrFI	CCNGG	2 cut(s)	504, 528
SfaNI	GCATC	1 cut(s)	841
SfuI	TTCGAA	1 cut(s)	389
SpeI	ACTAGT	1 cut(s)	598
Sse9I	AATT	2 cut(s)	135, 753
SsiI	CCGC	1 cut(s)	518
SspMI	CTAG	1 cut(s)	599
StyD4I	CCNGG	2 cut(s)	502, 526
TaaI	ACNGT	2 cut(s)	133, 710
TaqI	TCGA	4 cut(s)	345, 359, 389, 552
TasI	AATT	2 cut(s)	135, 753
TatI	WGTACW	1 cut(s)	595
TauI	GCSGC	1 cut(s)	520
TfiI	GAWTC	6 cut(s)	149, 245, 328, 395, 572, 776
Tru1I	TTAA	1 cut(s)	141
Tru9I	TTAA	1 cut(s)	141
TscAI	CASTG	1 cut(s)	439
TseFI	GTSAC	2 cut(s)	822, 831
TseI	GCWGC	2 cut(s)	381, 767
Tsp45I	GTSAC	2 cut(s)	822, 831
TspDTI	ATGAA	6 cut(s)	30, 60, 401, 408, 470, 645
TspGWI	ACGGA	3 cut(s)	321, 809, 897
TspRI	CASTG	1 cut(s)	439
XagI	CCTNNNNNAGG	1 cut(s)	525
XceI	RCATGY	1 cut(s)	26
XspI	CTAG	1 cut(s)	599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.