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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03630 |
| fragaria_vesca | FvH4_4g29990 FvH4_4g29990 |
| malus_domestica | MD13G1062500.v1.1 MD16G1060800.v1.1 |
| prunus_persica | Prupe.1G287500_v2.0.a1 |
| pyrus_communis | pycom16g05300 |
| rosa_chinensis | RchiOBHm_Chr4g0438271 |
| rosa_laevigata | RLG00000006375 |
| rosa_multiflora | Rmu_co8502665.1_g000001 Rmu_sc0011129.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00379360 |
| rosa_rugosa | Rorug04G0308300 Rorug04G0308300 Rorug04G0308300 Rorug04G0308400 |
| rosa_samantha | Rh4AG359600 Rh4BG370400 Rh4CG384600 Rh4DG365400 |
| rosa_wichuraiana | Rw0G006420 Rw0G016360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1850 |
| Acc36I | ACCTGC | 1 cut(s) | 1850 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1582 |
| AccBSI | CCGCTC | 1 cut(s) | 207 |
| AccII | CGCG | 2 cut(s) | 362, 1387 |
| AciI | CCGC | 3 cut(s) | 207, 303, 1062 |
| AclWI | GGATC | 4 cut(s) | 332, 1593, 1598, 1844 |
| AcsI | RAATTY | 1 cut(s) | 2080 |
| AcvI | CACGTG | 1 cut(s) | 137 |
| AfaI | GTAC | 1 cut(s) | 1941 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 863, 1582, 1817 |
| AflIII | ACRYGT | 2 cut(s) | 134, 1385 |
| AgsI | TTSAA | 2 cut(s) | 946, 1190 |
| AjnI | CCWGG | 2 cut(s) | 37, 1567 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2260, 2292 |
| Alw21I | GWGCWC | 1 cut(s) | 1174 |
| Alw26I | GTCTC | 3 cut(s) | 317, 926, 1722 |
| AlwI | GGATC | 4 cut(s) | 332, 1593, 1598, 1844 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 341, 1262 |
| ApeKI | GCWGC | 9 cut(s) | 18, 86, 1075, 1262, 1265, 2196, 2199, 2202, 2205 |
| ApoI | RAATTY | 1 cut(s) | 2080 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1048, 1086, 1185 |
| AspLEI | GCGC | 3 cut(s) | 364, 1291, 2039 |
| AsuHPI | GGTGA | 7 cut(s) | 221, 317, 1408, 1760, 1761, 1874, 1879 |
| AsuNHI | GCTAGC | 1 cut(s) | 2033 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 976, 1008 |
| BbrPI | CACGTG | 1 cut(s) | 137 |
| BbsI | GAAGAC | 4 cut(s) | 984, 1221, 1691, 1828 |
| Bbv12I | GWGCWC | 1 cut(s) | 1174 |
| BbvI | GCAGC | 9 cut(s) | 30, 73, 1087, 1249, 1252, 2183, 2186, 2189, 2192 |
| BceAI | ACGGC | 1 cut(s) | 2144 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 68, 102 |
| BciT130I | CCWGG | 2 cut(s) | 39, 1569 |
| BciVI | GTATCC | 1 cut(s) | 268 |
| BcoDI | GTCTC | 3 cut(s) | 317, 926, 1722 |
| BfaI | CTAG | 3 cut(s) | 1488, 1974, 2034 |
| BfmI | CTRYAG | 1 cut(s) | 1857 |
| BfuAI | ACCTGC | 1 cut(s) | 1850 |
| BfuI | GTATCC | 1 cut(s) | 268 |
| BisI | GCNGC | 9 cut(s) | 19, 87, 1076, 1263, 1266, 2197, 2200, 2203, 2206 |
| BlsI | GCNGC | 9 cut(s) | 20, 88, 1077, 1264, 1267, 2198, 2201, 2204, 2207 |
| Bme1390I | CCNGG | 2 cut(s) | 39, 1569 |
| BmiI | GGNNCC | 1 cut(s) | 1299 |
| BmrFI | CCNGG | 2 cut(s) | 39, 1569 |
| BmsI | GCATC | 1 cut(s) | 751 |
| BmtI | GCTAGC | 1 cut(s) | 2037 |
| BpiI | GAAGAC | 4 cut(s) | 984, 1221, 1691, 1828 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1133, 1165 |
| BpmI | CTGGAG | 1 cut(s) | 1794 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1269, 1371 |
| BsaAI | YACGTR | 2 cut(s) | 137, 1907 |
| BsaI | GGTCTC | 1 cut(s) | 1722 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1792, 1822 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 863, 1582, 1817 |
| Bse118I | RCCGGY | 1 cut(s) | 904 |
| Bse1I | ACTGG | 2 cut(s) | 1811, 1903 |
| BseBI | CCWGG | 2 cut(s) | 39, 1569 |
| BseGI | GGATG | 6 cut(s) | 712, 766, 1175, 1394, 1459, 1958 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 863, 1582, 1817 |
| BseNI | ACTGG | 2 cut(s) | 1811, 1903 |
| BseRI | GAGGAG | 7 cut(s) | 176, 464, 704, 848, 896, 992, 1107 |
| BseXI | GCAGC | 9 cut(s) | 30, 73, 1087, 1249, 1252, 2183, 2186, 2189, 2192 |
| BseYI | CCCAGC | 1 cut(s) | 1618 |
| Bsh1236I | CGCG | 2 cut(s) | 362, 1387 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1174 |
| BsiSI | CCGG | 2 cut(s) | 905, 1079 |
| BslFI | GGGAC | 1 cut(s) | 2086 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 863, 1582, 1817 |
| BsmAI | GTCTC | 3 cut(s) | 317, 926, 1722 |
| BsmFI | GGGAC | 1 cut(s) | 2086 |
| BsmI | GAATGC | 1 cut(s) | 1238 |
| Bso31I | GGTCTC | 1 cut(s) | 1722 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1174 |
| Bsp143I | GATC | 6 cut(s) | 337, 597, 1456, 1585, 1603, 1836 |
| BspACI | CCGC | 3 cut(s) | 207, 303, 1062 |
| BspFNI | CGCG | 2 cut(s) | 362, 1387 |
| BspHI | TCATGA | 2 cut(s) | 484, 916 |
| BspLI | GGNNCC | 1 cut(s) | 1299 |
| BspMAI | CTGCAG | 1 cut(s) | 1861 |
| BspMI | ACCTGC | 1 cut(s) | 1850 |
| BspOI | GCTAGC | 1 cut(s) | 2037 |
| BspPI | GGATC | 4 cut(s) | 332, 1593, 1598, 1844 |
| BspTNI | GGTCTC | 1 cut(s) | 1722 |
| BsrBI | CCGCTC | 1 cut(s) | 207 |
| BsrFI | RCCGGY | 1 cut(s) | 904 |
| BsrI | ACTGG | 2 cut(s) | 1811, 1903 |
| BssAI | RCCGGY | 1 cut(s) | 904 |
| BssMI | GATC | 6 cut(s) | 337, 597, 1456, 1585, 1603, 1836 |
| Bst2UI | CCWGG | 2 cut(s) | 39, 1569 |
| Bst4CI | ACNGT | 5 cut(s) | 126, 318, 414, 520, 846 |
| Bst6I | CTCTTC | 1 cut(s) | 1466 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1262 |
| BstBAI | YACGTR | 2 cut(s) | 137, 1907 |
| BstC8I | GCNNGC | 4 cut(s) | 32, 1170, 1287, 2035 |
| BstDEI | CTNAG | 4 cut(s) | 936, 1152, 1269, 1371 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 861 |
| BstF5I | GGATG | 6 cut(s) | 712, 766, 1175, 1394, 1459, 1958 |
| BstFNI | CGCG | 2 cut(s) | 362, 1387 |
| BstHHI | GCGC | 3 cut(s) | 364, 1291, 2039 |
| BstKTI | GATC | 6 cut(s) | 340, 600, 1459, 1588, 1606, 1839 |
| BstMAI | GTCTC | 3 cut(s) | 317, 926, 1722 |
| BstMBI | GATC | 6 cut(s) | 337, 597, 1456, 1585, 1603, 1836 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 27, 1262, 1716, 2202, 2205, 2214, 2223 |
| BstNI | CCWGG | 2 cut(s) | 39, 1569 |
| BstSCI | CCNGG | 2 cut(s) | 37, 1567 |
| BstSFI | CTRYAG | 1 cut(s) | 1857 |
| BstUI | CGCG | 2 cut(s) | 362, 1387 |
| BstV1I | GCAGC | 9 cut(s) | 30, 73, 1087, 1249, 1252, 2183, 2186, 2189, 2192 |
| BstV2I | GAAGAC | 4 cut(s) | 984, 1221, 1691, 1828 |
| BstX2I | RGATCY | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 337 |
| BsuI | GTATCC | 1 cut(s) | 268 |
| BtsCI | GGATG | 6 cut(s) | 712, 766, 1175, 1394, 1459, 1958 |
| BtsI | GCAGTG | 1 cut(s) | 2023 |
| BtsIMutI | CAGTG | 3 cut(s) | 1896, 2023, 2032 |
| BveI | ACCTGC | 1 cut(s) | 1850 |
| Cac8I | GCNNGC | 4 cut(s) | 32, 1170, 1287, 2035 |
| CaiI | CAGNNNCTG | 2 cut(s) | 341, 1262 |
| CciI | TCATGA | 2 cut(s) | 484, 916 |
| CfoI | GCGC | 3 cut(s) | 364, 1291, 2039 |
| Cfr10I | RCCGGY | 1 cut(s) | 904 |
| Csp6I | GTAC | 1 cut(s) | 1940 |
| CviAII | CATG | 8 cut(s) | 14, 98, 248, 485, 584, 617, 917, 1733 |
| CviQI | GTAC | 1 cut(s) | 1940 |
| DdeI | CTNAG | 4 cut(s) | 936, 1152, 1269, 1371 |
| DpnI | GATC | 6 cut(s) | 339, 599, 1458, 1587, 1605, 1838 |
| DpnII | GATC | 6 cut(s) | 337, 597, 1456, 1585, 1603, 1836 |
| DraI | TTTAAA | 1 cut(s) | 670 |
| Eam1104I | CTCTTC | 1 cut(s) | 1466 |
| EarI | CTCTTC | 1 cut(s) | 1466 |
| Eco31I | GGTCTC | 1 cut(s) | 1722 |
| Eco72I | CACGTG | 1 cut(s) | 137 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 861 |
| EcoRII | CCWGG | 2 cut(s) | 37, 1567 |
| FaeI | CATG | 8 cut(s) | 17, 101, 251, 488, 587, 620, 920, 1736 |
| FaqI | GGGAC | 1 cut(s) | 2086 |
| FatI | CATG | 8 cut(s) | 13, 97, 247, 484, 583, 616, 916, 1732 |
| Fnu4HI | GCNGC | 9 cut(s) | 19, 87, 1076, 1263, 1266, 2197, 2200, 2203, 2206 |
| FokI | GGATG | 6 cut(s) | 699, 773, 1162, 1381, 1466, 1945 |
| Fsp4HI | GCNGC | 9 cut(s) | 19, 87, 1076, 1263, 1266, 2197, 2200, 2203, 2206 |
| FspBI | CTAG | 3 cut(s) | 1488, 1974, 2034 |
| GlaI | GCGC | 3 cut(s) | 363, 1290, 2038 |
| GluI | GCNGC | 9 cut(s) | 19, 87, 1076, 1263, 1266, 2197, 2200, 2203, 2206 |
| GsaI | CCCAGC | 1 cut(s) | 1622 |
| GsuI | CTGGAG | 1 cut(s) | 1794 |
| HapII | CCGG | 2 cut(s) | 905, 1079 |
| HhaI | GCGC | 3 cut(s) | 364, 1291, 2039 |
| Hin1II | CATG | 8 cut(s) | 17, 101, 251, 488, 587, 620, 920, 1736 |
| Hin6I | GCGC | 3 cut(s) | 362, 1289, 2037 |
| HinP1I | GCGC | 3 cut(s) | 362, 1289, 2037 |
| HindIII | AAGCTT | 2 cut(s) | 32, 2090 |
| HpaII | CCGG | 2 cut(s) | 905, 1079 |
| HphI | GGTGA | 7 cut(s) | 221, 317, 1408, 1760, 1761, 1874, 1879 |
| Hpy166II | GTNNAC | 5 cut(s) | 314, 410, 842, 1471, 2306 |
| Hpy8I | GTNNAC | 5 cut(s) | 314, 410, 842, 1471, 2306 |
| Hpy99I | CGWCG | 1 cut(s) | 2322 |
| HpyAV | CCTTC | 4 cut(s) | 583, 1423, 1838, 2007 |
| HpyCH4III | ACNGT | 5 cut(s) | 126, 318, 414, 520, 846 |
| HpyCH4IV | ACGT | 4 cut(s) | 136, 1906, 2116, 2308 |
| HpyCH4V | TGCA | 9 cut(s) | 89, 140, 524, 764, 1238, 1859, 1910, 2021, 2208 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 27, 1262, 1716, 2202, 2205, 2214, 2223 |
| HpyF3I | CTNAG | 4 cut(s) | 936, 1152, 1269, 1371 |
| HpySE526I | ACGT | 4 cut(s) | 136, 1906, 2116, 2308 |
| Hsp92II | CATG | 8 cut(s) | 17, 101, 251, 488, 587, 620, 920, 1736 |
| HspAI | GCGC | 3 cut(s) | 362, 1289, 2037 |
| Kzo9I | GATC | 6 cut(s) | 337, 597, 1456, 1585, 1603, 1836 |
| LmnI | GCTCC | 8 cut(s) | 252, 451, 684, 1177, 1975, 1999, 2030, 2214 |
| Lsp1109I | GCAGC | 9 cut(s) | 30, 73, 1087, 1249, 1252, 2183, 2186, 2189, 2192 |
| LweI | GCATC | 1 cut(s) | 751 |
| MaeI | CTAG | 3 cut(s) | 1488, 1974, 2034 |
| MaeII | ACGT | 4 cut(s) | 136, 1906, 2116, 2308 |
| MaeIII | GTNAC | 2 cut(s) | 1388, 1546 |
| MalI | GATC | 6 cut(s) | 339, 599, 1458, 1587, 1605, 1838 |
| MbiI | CCGCTC | 1 cut(s) | 207 |
| MboI | GATC | 6 cut(s) | 337, 597, 1456, 1585, 1603, 1836 |
| MfeI | CAATTG | 4 cut(s) | 269, 509, 797, 1950 |
| MflI | RGATCY | 1 cut(s) | 337 |
| MhlI | GDGCHC | 1 cut(s) | 1174 |
| MluCI | AATT | 8 cut(s) | 269, 509, 797, 1326, 1775, 1826, 1950, 2080 |
| MluI | ACGCGT | 1 cut(s) | 1385 |
| MlyI | GAGTC | 4 cut(s) | 1466, 1694, 1750, 2176 |
| MmeI | TCCRAC | 6 cut(s) | 300, 396, 444, 540, 1674, 1784 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1048, 1086, 1185 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1167, 1284, 1448 |
| MspA1I | CMGCKG | 1 cut(s) | 86 |
| MspI | CCGG | 2 cut(s) | 905, 1079 |
| MspR9I | CCNGG | 2 cut(s) | 39, 1569 |
| MunI | CAATTG | 4 cut(s) | 269, 509, 797, 1950 |
| Mva1269I | GAATGC | 1 cut(s) | 1238 |
| MvaI | CCWGG | 2 cut(s) | 39, 1569 |
| MvnI | CGCG | 2 cut(s) | 362, 1387 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 27, 1262, 1716, 2202, 2205, 2214, 2223 |
| NdeII | GATC | 6 cut(s) | 337, 597, 1456, 1585, 1603, 1836 |
| NheI | GCTAGC | 1 cut(s) | 2033 |
| NlaIII | CATG | 8 cut(s) | 17, 101, 251, 488, 587, 620, 920, 1736 |
| NlaIV | GGNNCC | 1 cut(s) | 1299 |
| NmeAIII | GCCGAG | 1 cut(s) | 1316 |
| NmuCI | GTSAC | 1 cut(s) | 1546 |
| PagI | TCATGA | 2 cut(s) | 484, 916 |
| PaqCI | CACCTGC | 1 cut(s) | 1850 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2314 |
| PctI | GAATGC | 1 cut(s) | 1238 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1048, 1086, 1185 |
| PfeI | GAWTC | 9 cut(s) | 876, 1181, 1436, 1482, 1559, 1572, 1614, 1853, 2102 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1582 |
| PfoI | TCCNGGA | 1 cut(s) | 1567 |
| PkrI | GCNGC | 9 cut(s) | 20, 88, 1077, 1264, 1267, 2198, 2201, 2204, 2207 |
| PleI | GAGTC | 4 cut(s) | 1466, 1693, 1750, 2175 |
| PmaCI | CACGTG | 1 cut(s) | 137 |
| PmlI | CACGTG | 1 cut(s) | 137 |
| PpsI | GAGTC | 4 cut(s) | 1466, 1693, 1750, 2175 |
| Ppu21I | YACGTR | 2 cut(s) | 137, 1907 |
| Psp6I | CCWGG | 2 cut(s) | 37, 1567 |
| PspCI | CACGTG | 1 cut(s) | 137 |
| PspFI | CCCAGC | 1 cut(s) | 1618 |
| PspGI | CCWGG | 2 cut(s) | 37, 1567 |
| PspN4I | GGNNCC | 1 cut(s) | 1299 |
| PstI | CTGCAG | 1 cut(s) | 1861 |
| PstNI | CAGNNNCTG | 2 cut(s) | 341, 1262 |
| PsuI | RGATCY | 1 cut(s) | 337 |
| PvuII | CAGCTG | 1 cut(s) | 86 |
| RsaI | GTAC | 1 cut(s) | 1941 |
| RsaNI | GTAC | 1 cut(s) | 1940 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1167, 1284, 1448 |
| SatI | GCNGC | 9 cut(s) | 19, 87, 1076, 1263, 1266, 2197, 2200, 2203, 2206 |
| Sau3AI | GATC | 6 cut(s) | 337, 597, 1456, 1585, 1603, 1836 |
| SchI | GAGTC | 4 cut(s) | 1466, 1694, 1750, 2176 |
| ScrFI | CCNGG | 2 cut(s) | 39, 1569 |
| SduI | GDGCHC | 1 cut(s) | 1174 |
| SfaNI | GCATC | 1 cut(s) | 751 |
| SfcI | CTRYAG | 1 cut(s) | 1857 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1167, 1284, 1448 |
| Sse9I | AATT | 8 cut(s) | 269, 509, 797, 1326, 1775, 1826, 1950, 2080 |
| SsiI | CCGC | 3 cut(s) | 207, 303, 1062 |
| SspI | AATATT | 1 cut(s) | 2061 |
| SspMI | CTAG | 3 cut(s) | 1488, 1974, 2034 |
| StyD4I | CCNGG | 2 cut(s) | 37, 1567 |
| TaaI | ACNGT | 5 cut(s) | 126, 318, 414, 520, 846 |
| TaiI | ACGT | 4 cut(s) | 139, 1909, 2119, 2311 |
| TaqI | TCGA | 4 cut(s) | 368, 879, 1042, 1839 |
| TasI | AATT | 8 cut(s) | 269, 509, 797, 1326, 1775, 1826, 1950, 2080 |
| TfiI | GAWTC | 9 cut(s) | 876, 1181, 1436, 1482, 1559, 1572, 1614, 1853, 2102 |
| TscAI | CASTG | 3 cut(s) | 1903, 2023, 2032 |
| TseFI | GTSAC | 1 cut(s) | 1546 |
| TseI | GCWGC | 9 cut(s) | 18, 86, 1075, 1262, 1265, 2196, 2199, 2202, 2205 |
| Tsp45I | GTSAC | 1 cut(s) | 1546 |
| TspGWI | ACGGA | 5 cut(s) | 504, 1571, 1608, 1615, 2306 |
| TspRI | CASTG | 3 cut(s) | 1903, 2023, 2032 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1582 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 861 |
| XapI | RAATTY | 1 cut(s) | 2080 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 104, 1657, 2009 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1048, 1086, 1185 |
| XspI | CTAG | 3 cut(s) | 1488, 1974, 2034 |