Rh4CG384600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
63715296 .. 63718817
3522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG384600.1

Sequence Viewer

Length: 1512 bp
ATGGACTTGGAACATGGCAGGACTAGCAAGCTTCCAGACATTGTTATTGAGGAGATTACACAGCCGGAAACACCTGTAAGAGTTCCTGATCGGAGTGTGGAGATTAAACAGTCGGAAACAACTGCAAAAGTTCCTGATCGGAGTGGGGAGATTAAGCAGTCGGAAACACCTCTAAGAGTTCCTGATGGGAGTGGAGAGATTAACCAGTCGGAAACTCCCGCAAAAGTTCCTGATGGGAGCGGGGAGAGTAAGCATTCGGAAACACTTCCAAAAGCTAATGATGGGAGGCCATCTCCTGCAGTGCCGTCCAAAGTTGTAGAAGCTACTGCTAAGGGAGGTCATCGGCGTGCCCCATCGGAAACAGTTCCAGACGTTAATGATGGGAATGGAGGCAGTAAGCACCCGTCCTCTCCTTCACCCTCATCCAAAGTTGTAGAGGCTACTGCTAAGGGAGGTCATCGGCGTGGCCCATCAGGAACACTTCCAAAAGTTAATGATGGGAGTGGAGGCAGTAAGCACTCGTCCTCTCCTCCAATCTCATCCAAAGTTGCAGAGGCTACTGCTAAGGGAGGTCATCAGCGTGCCCCATCCGATAAGCTATTGTCTTTCACCTCTACATCTTCATCGGGATCAGACACATCAATGGATGATCTGTTCCAAGTGGACTCGAATAGATTCTCTACTTCAACACATATTCCTCCCCTCCCTAAAGATTATGCCCCAAACTCTCCTTATCGCCCATCAACATCTCGTGCGTCAAATGTCACCAATGGGTTACCAACGGAATCCCCTGCAGTCCAAATGATGGATCGGTATGGAGGATATGATCCTTACAGGATCCCATCTACCGTGTTTGATACAAGTAATGTATCCAACAAAGAAATGGAATGGAGCGCTGCTTCCAATGAGTCATTATTTAGTCTTCATTTAGGCAACAACAGTTTTTCCAGAGACCATATACTTATGTTGAGTGATTTGGGTCCAACCAAATCAAGTGAATTGCTCGAGATTAGTCCACGCACTCGACCTCCAGTAGTAGAAACAGAATTCGAAATTAGTAGGATCGAAGAGGGGAGAGAATCAGCAGCTGAAGAAGTGGCAGATGCGAACATCAAGGACACTGAACATGCAAGTGCTGAAAATCATAGTGAGGGGAGGGTACCACCAGCCCCTAAATCCCCTAGCCTTGCCCACTCCCGCCATTCCGATGGGAGTGGATTAAGTGGAACTAGCACACGGTCCTTTGCCTTCCCAATGTACGTCTATATATATGATCTAAGTTTGACAGATGGGACGAAAAATTCTCTGAAGCTTCCAGGAGATTCTGAAGAGCAGCATCCGGAGCCACCACCACCAGCAGCAGCAGCCAGCAGGACAAAAAAATCAAAGAAAAAAAAGACCCGTTGGCTTCCTTGCTTTTCTTGTTCTTGGTGCAAGTGGGGCTGTTGTTGTTCTTGTCGTCGGCTTTGTTCTTGTCCACGTTTTTTCCGTCGCTGTTGTTGTTGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

503

Amino Acids

54.1

Weight (kDa)

6.94

Isoelectric Point (pI)

65.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1159
AccB1I GGYRCC 1 cut(s) 1159
AccB7I CCANNNNNTGG 1 cut(s) 805
AccBSI CCGCTC 1 cut(s) 240
AccIII TCCGGA 1 cut(s) 1339
AciI CCGC 3 cut(s) 219, 240, 1198
AclWI GGATC 6 cut(s) 637, 816, 821, 832, 845, 1070
AcsI RAATTY 2 cut(s) 1046, 1300
AcuI CTGAAG 3 cut(s) 1110, 1328, 1347
AfaI GTAC 2 cut(s) 1161, 1259
AfeI AGCGCT 1 cut(s) 895
AfiI CCNNNNNNNGG 1 cut(s) 805
AgsI TTSAA 1 cut(s) 687
AjnI CCWGG 1 cut(s) 1315
AloI GAACNNNNNNTCC 2 cut(s) 638, 670
AluBI AGCT 6 cut(s) 31, 275, 323, 598, 1088, 1312
AluI AGCT 6 cut(s) 31, 275, 323, 598, 1088, 1312
Alw26I GTCTC 1 cut(s) 945
AlwI GGATC 6 cut(s) 637, 816, 821, 832, 845, 1070
AlwNI CAGNNNCTG 1 cut(s) 1088
Ama87I CYCGRG 1 cut(s) 1004
Aor13HI TCCGGA 1 cut(s) 1339
Aor51HI AGCGCT 1 cut(s) 895
AoxI GGCC 2 cut(s) 287, 466
ApeKI GCWGC 6 cut(s) 896, 1085, 1333, 1358, 1361, 1364
ApoI RAATTY 2 cut(s) 1046, 1300
Asp700I GAANNNNTTC 3 cut(s) 264, 363, 674
Asp718I GGTACC 1 cut(s) 1159
AspLEI GCGC 1 cut(s) 896
AspS9I GGNCC 3 cut(s) 467, 980, 1239
AsuHPI GGTGA 3 cut(s) 408, 601, 757
AsuII TTCGAA 1 cut(s) 1050
AvaI CYCGRG 1 cut(s) 1004
AvaII GGWCC 2 cut(s) 980, 1239
BaeGI GKGCMC 2 cut(s) 352, 586
BamHI GGATCC 1 cut(s) 837
BanI GGYRCC 1 cut(s) 1159
BauI CACGAG 1 cut(s) 750
BbsI GAAGAC 1 cut(s) 914
BbvI GCAGC 6 cut(s) 883, 1097, 1345, 1370, 1373, 1376
BceAI ACGGC 1 cut(s) 289
BciT130I CCWGG 1 cut(s) 1317
BciVI GTATCC 1 cut(s) 880
BcoDI GTCTC 1 cut(s) 945
BfaI CTAG 3 cut(s) 24, 1182, 1230
BfmI CTRYAG 2 cut(s) 297, 792
BfoI RGCGCY 1 cut(s) 897
BfuI GTATCC 1 cut(s) 880
BisI GCNGC 6 cut(s) 897, 1086, 1334, 1359, 1362, 1365
BlsI GCNGC 6 cut(s) 898, 1087, 1335, 1360, 1363, 1366
Bme1390I CCNGG 1 cut(s) 1317
Bme18I GGWCC 2 cut(s) 980, 1239
BmeT110I CYCGRG 1 cut(s) 1004
BmgT120I GGNCC 3 cut(s) 467, 980, 1239
BmiI GGNNCC 4 cut(s) 839, 981, 1161, 1344
BmrFI CCNGG 1 cut(s) 1317
BmsI GCATC 2 cut(s) 1093, 1345
BpiI GAAGAC 1 cut(s) 914
BplI GAGNNNNNCTC 2 cut(s) 277, 309
BpmI CTGGAG 1 cut(s) 1014
Bpu10I CCTNAGC 3 cut(s) 330, 447, 564
Bpu14I TTCGAA 1 cut(s) 1050
BsaI GGTCTC 1 cut(s) 945
BsaWI WCCGGW 1 cut(s) 1339
BsaXI ACNNNNNCTCC 2 cut(s) 1012, 1042
Bsc4I CCNNNNNNNGG 1 cut(s) 805
Bse1I ACTGG 2 cut(s) 205, 1031
BseAI TCCGGA 1 cut(s) 1339
BseBI CCWGG 1 cut(s) 1317
BseGI GGATG 5 cut(s) 422, 539, 587, 652, 1336
BseLI CCNNNNNNNGG 1 cut(s) 805
BseNI ACTGG 2 cut(s) 205, 1031
BseRI GAGGAG 2 cut(s) 65, 519
BseSI GKGCMC 2 cut(s) 352, 586
BseXI GCAGC 6 cut(s) 883, 1097, 1345, 1370, 1373, 1376
BshFI GGCC 2 cut(s) 289, 468
BshNI GGYRCC 1 cut(s) 1159
BsiHKCI CYCGRG 1 cut(s) 1004
BsiSI CCGG 2 cut(s) 65, 1340
BslFI GGGAC 1 cut(s) 1306
BslI CCNNNNNNNGG 1 cut(s) 805
BsmAI GTCTC 1 cut(s) 945
BsmFI GGGAC 1 cut(s) 1306
BsmI GAATGC 1 cut(s) 253
BsnI GGCC 2 cut(s) 289, 468
Bso31I GGTCTC 1 cut(s) 945
BsoBI CYCGRG 1 cut(s) 1004
Bsp119I TTCGAA 1 cut(s) 1050
Bsp1286I GDGCHC 2 cut(s) 352, 586
Bsp13I TCCGGA 1 cut(s) 1339
Bsp143I GATC 9 cut(s) 88, 136, 629, 649, 808, 826, 837, 1062, 1273
BspACI CCGC 3 cut(s) 219, 240, 1198
BspANI GGCC 2 cut(s) 289, 468
BspEI TCCGGA 1 cut(s) 1339
BspLI GGNNCC 4 cut(s) 839, 981, 1161, 1344
BspMAI CTGCAG 2 cut(s) 301, 796
BspPI GGATC 6 cut(s) 637, 816, 821, 832, 845, 1070
BspQI GCTCTTC 1 cut(s) 1323
BspT104I TTCGAA 1 cut(s) 1050
BspT107I GGYRCC 1 cut(s) 1159
BspTNI GGTCTC 1 cut(s) 945
BsrBI CCGCTC 1 cut(s) 240
BsrI ACTGG 2 cut(s) 205, 1031
BssMI GATC 9 cut(s) 88, 136, 629, 649, 808, 826, 837, 1062, 1273
BssSI CACGAG 1 cut(s) 750
Bst2BI CACGAG 1 cut(s) 750
Bst2UI CCWGG 1 cut(s) 1317
Bst4CI ACNGT 5 cut(s) 111, 364, 850, 941, 1239
Bst6I CTCTTC 2 cut(s) 1062, 1323
BstBI TTCGAA 1 cut(s) 1050
BstC8I GCNNGC 4 cut(s) 29, 348, 582, 1369
BstDEI CTNAG 5 cut(s) 173, 330, 447, 564, 1277
BstEII GGTNACC 1 cut(s) 774
BstF5I GGATG 5 cut(s) 422, 539, 587, 652, 1336
BstH2I RGCGCY 1 cut(s) 897
BstHHI GCGC 1 cut(s) 896
BstKTI GATC 9 cut(s) 91, 139, 632, 652, 811, 829, 840, 1065, 1276
BstMAI GTCTC 1 cut(s) 945
BstMBI GATC 9 cut(s) 88, 136, 629, 649, 808, 826, 837, 1062, 1273
BstMWI GCNNNNNNNGC 4 cut(s) 24, 1342, 1364, 1440
BstNI CCWGG 1 cut(s) 1317
BstNSI RCATGY 1 cut(s) 1130
BstPI GGTNACC 1 cut(s) 774
BstSCI CCNGG 1 cut(s) 1315
BstSFI CTRYAG 2 cut(s) 297, 792
BstSLI GKGCMC 2 cut(s) 352, 586
BstV1I GCAGC 6 cut(s) 883, 1097, 1345, 1370, 1373, 1376
BstV2I GAAGAC 1 cut(s) 914
BstX2I RGATCY 1 cut(s) 837
BstXI CCANNNNNNTGG 1 cut(s) 1208
BstYI RGATCY 1 cut(s) 837
BsuI GTATCC 1 cut(s) 880
BsuRI GGCC 2 cut(s) 289, 468
BtsCI GGATG 5 cut(s) 422, 539, 587, 652, 1336
BtsI GCAGTG 1 cut(s) 306
BtsIMutI CAGTG 2 cut(s) 306, 1119
Cac8I GCNNGC 4 cut(s) 29, 348, 582, 1369
CaiI CAGNNNCTG 1 cut(s) 1088
CfoI GCGC 1 cut(s) 896
Cfr13I GGNCC 3 cut(s) 467, 980, 1239
CseI GACGC 1 cut(s) 744
Csp6I GTAC 2 cut(s) 1160, 1258
CviAII CATG 2 cut(s) 14, 1127
CviQI GTAC 2 cut(s) 1160, 1258
DdeI CTNAG 5 cut(s) 173, 330, 447, 564, 1277
DpnI GATC 9 cut(s) 90, 138, 631, 651, 810, 828, 839, 1064, 1275
DpnII GATC 9 cut(s) 88, 136, 629, 649, 808, 826, 837, 1062, 1273
Eam1104I CTCTTC 2 cut(s) 1062, 1323
EarI CTCTTC 2 cut(s) 1062, 1323
Eco31I GGTCTC 1 cut(s) 945
Eco47I GGWCC 2 cut(s) 980, 1239
Eco47III AGCGCT 1 cut(s) 895
Eco57I CTGAAG 3 cut(s) 1110, 1328, 1347
Eco88I CYCGRG 1 cut(s) 1004
Eco91I GGTNACC 1 cut(s) 774
EcoO65I GGTNACC 1 cut(s) 774
EcoRI GAATTC 1 cut(s) 1046
EcoRII CCWGG 1 cut(s) 1315
FaeI CATG 2 cut(s) 17, 1130
FaqI GGGAC 1 cut(s) 1306
FatI CATG 2 cut(s) 13, 1126
FauI CCCGC 3 cut(s) 226, 233, 1205
Fnu4HI GCNGC 6 cut(s) 897, 1086, 1334, 1359, 1362, 1365
FokI GGATG 5 cut(s) 409, 526, 574, 659, 1323
Fsp4HI GCNGC 6 cut(s) 897, 1086, 1334, 1359, 1362, 1365
FspBI CTAG 3 cut(s) 24, 1182, 1230
GlaI GCGC 1 cut(s) 895
GluI GCNGC 6 cut(s) 897, 1086, 1334, 1359, 1362, 1365
GsuI CTGGAG 1 cut(s) 1014
HaeII RGCGCY 1 cut(s) 897
HaeIII GGCC 2 cut(s) 289, 468
HapII CCGG 2 cut(s) 65, 1340
HgaI GACGC 1 cut(s) 744
HhaI GCGC 1 cut(s) 896
Hin1II CATG 2 cut(s) 17, 1130
Hin6I GCGC 1 cut(s) 894
HinP1I GCGC 1 cut(s) 894
HindIII AAGCTT 2 cut(s) 29, 1310
HinfI GANTC 6 cut(s) 665, 675, 785, 908, 1079, 1322
HpaII CCGG 2 cut(s) 65, 1340
HphI GGTGA 3 cut(s) 408, 601, 757
Hpy166II GTNNAC 3 cut(s) 664, 1016, 1478
Hpy8I GTNNAC 3 cut(s) 664, 1016, 1478
Hpy99I CGWCG 2 cut(s) 1464, 1494
HpyAV CCTTC 2 cut(s) 423, 1258
HpyCH4III ACNGT 5 cut(s) 111, 364, 850, 941, 1239
HpyCH4IV ACGT 3 cut(s) 372, 1260, 1480
HpyCH4V TGCA 6 cut(s) 125, 299, 551, 794, 1130, 1434
HpyF10VI GCNNNNNNNGC 4 cut(s) 24, 1342, 1364, 1440
HpyF3I CTNAG 5 cut(s) 173, 330, 447, 564, 1277
HpySE526I ACGT 3 cut(s) 372, 1260, 1480
Hsp92II CATG 2 cut(s) 17, 1130
HspAI GCGC 1 cut(s) 894
Kpn2I TCCGGA 1 cut(s) 1339
KpnI GGTACC 1 cut(s) 1163
Kzo9I GATC 9 cut(s) 88, 136, 629, 649, 808, 826, 837, 1062, 1273
LguI GCTCTTC 1 cut(s) 1323
LmnI GCTCC 3 cut(s) 237, 891, 1342
Lsp1109I GCAGC 6 cut(s) 883, 1097, 1345, 1370, 1373, 1376
LweI GCATC 2 cut(s) 1093, 1345
MaeI CTAG 3 cut(s) 24, 1182, 1230
MaeII ACGT 3 cut(s) 372, 1260, 1480
MaeIII GTNAC 2 cut(s) 763, 774
MalI GATC 9 cut(s) 90, 138, 631, 651, 810, 828, 839, 1064, 1275
MbiI CCGCTC 1 cut(s) 240
MboI GATC 9 cut(s) 88, 136, 629, 649, 808, 826, 837, 1062, 1273
MboII GAAGA 5 cut(s) 612, 914, 1079, 1103, 1340
MflI RGATCY 1 cut(s) 837
MhlI GDGCHC 2 cut(s) 352, 586
MluCI AATT 4 cut(s) 998, 1046, 1053, 1300
MlyI GAGTC 2 cut(s) 659, 917
MmeI TCCRAC 5 cut(s) 93, 141, 189, 897, 1007
MroI TCCGGA 1 cut(s) 1339
MroXI GAANNNNTTC 3 cut(s) 264, 363, 674
MseI TTAA 7 cut(s) 105, 153, 201, 375, 492, 1220, 1510
MslI CAYNNNNRTG 6 cut(s) 345, 462, 579, 641, 1131, 1206
MspA1I CMGCKG 1 cut(s) 1088
MspI CCGG 2 cut(s) 65, 1340
MspR9I CCNGG 1 cut(s) 1317
Mva1269I GAATGC 1 cut(s) 253
MvaI CCWGG 1 cut(s) 1317
MwoI GCNNNNNNNGC 4 cut(s) 24, 1342, 1364, 1440
NdeII GATC 9 cut(s) 88, 136, 629, 649, 808, 826, 837, 1062, 1273
NlaIII CATG 2 cut(s) 17, 1130
NlaIV GGNNCC 4 cut(s) 839, 981, 1161, 1344
NmuCI GTSAC 1 cut(s) 763
NspI RCATGY 1 cut(s) 1130
NspV TTCGAA 1 cut(s) 1050
PaeR7I CTCGAG 1 cut(s) 1004
PciSI GCTCTTC 1 cut(s) 1323
PcsI WCGNNNNNNNCGW 1 cut(s) 1486
PctI GAATGC 1 cut(s) 253
PdmI GAANNNNTTC 3 cut(s) 264, 363, 674
PfeI GAWTC 4 cut(s) 675, 785, 1079, 1322
PflMI CCANNNNNTGG 1 cut(s) 805
PfoI TCCNGGA 1 cut(s) 1315
PkrI GCNGC 6 cut(s) 898, 1087, 1335, 1360, 1363, 1366
PleI GAGTC 2 cut(s) 659, 916
PpsI GAGTC 2 cut(s) 659, 916
Psp6I CCWGG 1 cut(s) 1315
PspEI GGTNACC 1 cut(s) 774
PspGI CCWGG 1 cut(s) 1315
PspN4I GGNNCC 4 cut(s) 839, 981, 1161, 1344
PspPI GGNCC 3 cut(s) 467, 980, 1239
PstI CTGCAG 2 cut(s) 301, 796
PstNI CAGNNNCTG 1 cut(s) 1088
PsuI RGATCY 1 cut(s) 837
PvuII CAGCTG 1 cut(s) 1088
RsaI GTAC 2 cut(s) 1161, 1259
RsaNI GTAC 2 cut(s) 1160, 1258
RseI CAYNNNNRTG 6 cut(s) 345, 462, 579, 641, 1131, 1206
SapI GCTCTTC 1 cut(s) 1323
SaqAI TTAA 7 cut(s) 105, 153, 201, 375, 492, 1220, 1510
SatI GCNGC 6 cut(s) 897, 1086, 1334, 1359, 1362, 1365
Sau3AI GATC 9 cut(s) 88, 136, 629, 649, 808, 826, 837, 1062, 1273
Sau96I GGNCC 3 cut(s) 467, 980, 1239
SchI GAGTC 2 cut(s) 659, 917
ScrFI CCNGG 1 cut(s) 1317
SduI GDGCHC 2 cut(s) 352, 586
SfaNI GCATC 2 cut(s) 1093, 1345
SfcI CTRYAG 2 cut(s) 297, 792
Sfr274I CTCGAG 1 cut(s) 1004
SfuI TTCGAA 1 cut(s) 1050
SinI GGWCC 2 cut(s) 980, 1239
SlaI CTCGAG 1 cut(s) 1004
SmiMI CAYNNNNRTG 6 cut(s) 345, 462, 579, 641, 1131, 1206
SmlI CTYRAG 1 cut(s) 1004
SmoI CTYRAG 1 cut(s) 1004
Sse9I AATT 4 cut(s) 998, 1046, 1053, 1300
SsiI CCGC 3 cut(s) 219, 240, 1198
SspMI CTAG 3 cut(s) 24, 1182, 1230
StyD4I CCNGG 1 cut(s) 1315
TaaI ACNGT 5 cut(s) 111, 364, 850, 941, 1239
TaiI ACGT 3 cut(s) 375, 1263, 1483
TaqI TCGA 5 cut(s) 668, 1005, 1024, 1050, 1065
TasI AATT 4 cut(s) 998, 1046, 1053, 1300
TfiI GAWTC 4 cut(s) 675, 785, 1079, 1322
Tru1I TTAA 7 cut(s) 105, 153, 201, 375, 492, 1220, 1510
Tru9I TTAA 7 cut(s) 105, 153, 201, 375, 492, 1220, 1510
TscAI CASTG 2 cut(s) 306, 1126
TseFI GTSAC 1 cut(s) 763
TseI GCWGC 6 cut(s) 896, 1085, 1333, 1358, 1361, 1364
Tsp45I GTSAC 1 cut(s) 763
TspDTI ATGAA 2 cut(s) 612, 914
TspGWI ACGGA 2 cut(s) 797, 1478
TspRI CASTG 2 cut(s) 306, 1126
Van91I CCANNNNNTGG 1 cut(s) 805
VpaK11BI GGWCC 2 cut(s) 980, 1239
XapI RAATTY 2 cut(s) 1046, 1300
XceI RCATGY 1 cut(s) 1130
XcmI CCANNNNNNNNNTGG 1 cut(s) 880
XhoI CTCGAG 1 cut(s) 1004
XmnI GAANNNNTTC 3 cut(s) 264, 363, 674
XspI CTAG 3 cut(s) 24, 1182, 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.