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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03630 |
| fragaria_vesca | FvH4_4g29990 FvH4_4g29990 |
| malus_domestica | MD13G1062500.v1.1 MD16G1060800.v1.1 |
| prunus_persica | Prupe.1G287500_v2.0.a1 |
| pyrus_communis | pycom16g05300 |
| rosa_chinensis | RchiOBHm_Chr4g0438271 |
| rosa_laevigata | RLG00000006375 |
| rosa_multiflora | Rmu_co8502665.1_g000001 Rmu_sc0011129.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00379360 |
| rosa_rugosa | Rorug04G0308300 Rorug04G0308300 Rorug04G0308300 Rorug04G0308400 |
| rosa_samantha | Rh4AG359600 Rh4BG370400 Rh4CG384600 Rh4DG365400 |
| rosa_wichuraiana | Rw0G006420 Rw0G016360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1159 |
| AccB1I | GGYRCC | 1 cut(s) | 1159 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 805 |
| AccBSI | CCGCTC | 1 cut(s) | 240 |
| AccIII | TCCGGA | 1 cut(s) | 1339 |
| AciI | CCGC | 3 cut(s) | 219, 240, 1198 |
| AclWI | GGATC | 6 cut(s) | 637, 816, 821, 832, 845, 1070 |
| AcsI | RAATTY | 2 cut(s) | 1046, 1300 |
| AcuI | CTGAAG | 3 cut(s) | 1110, 1328, 1347 |
| AfaI | GTAC | 2 cut(s) | 1161, 1259 |
| AfeI | AGCGCT | 1 cut(s) | 895 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 805 |
| AgsI | TTSAA | 1 cut(s) | 687 |
| AjnI | CCWGG | 1 cut(s) | 1315 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 638, 670 |
| AluBI | AGCT | 6 cut(s) | 31, 275, 323, 598, 1088, 1312 |
| AluI | AGCT | 6 cut(s) | 31, 275, 323, 598, 1088, 1312 |
| Alw26I | GTCTC | 1 cut(s) | 945 |
| AlwI | GGATC | 6 cut(s) | 637, 816, 821, 832, 845, 1070 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1088 |
| Ama87I | CYCGRG | 1 cut(s) | 1004 |
| Aor13HI | TCCGGA | 1 cut(s) | 1339 |
| Aor51HI | AGCGCT | 1 cut(s) | 895 |
| AoxI | GGCC | 2 cut(s) | 287, 466 |
| ApeKI | GCWGC | 6 cut(s) | 896, 1085, 1333, 1358, 1361, 1364 |
| ApoI | RAATTY | 2 cut(s) | 1046, 1300 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 264, 363, 674 |
| Asp718I | GGTACC | 1 cut(s) | 1159 |
| AspLEI | GCGC | 1 cut(s) | 896 |
| AspS9I | GGNCC | 3 cut(s) | 467, 980, 1239 |
| AsuHPI | GGTGA | 3 cut(s) | 408, 601, 757 |
| AsuII | TTCGAA | 1 cut(s) | 1050 |
| AvaI | CYCGRG | 1 cut(s) | 1004 |
| AvaII | GGWCC | 2 cut(s) | 980, 1239 |
| BaeGI | GKGCMC | 2 cut(s) | 352, 586 |
| BamHI | GGATCC | 1 cut(s) | 837 |
| BanI | GGYRCC | 1 cut(s) | 1159 |
| BauI | CACGAG | 1 cut(s) | 750 |
| BbsI | GAAGAC | 1 cut(s) | 914 |
| BbvI | GCAGC | 6 cut(s) | 883, 1097, 1345, 1370, 1373, 1376 |
| BceAI | ACGGC | 1 cut(s) | 289 |
| BciT130I | CCWGG | 1 cut(s) | 1317 |
| BciVI | GTATCC | 1 cut(s) | 880 |
| BcoDI | GTCTC | 1 cut(s) | 945 |
| BfaI | CTAG | 3 cut(s) | 24, 1182, 1230 |
| BfmI | CTRYAG | 2 cut(s) | 297, 792 |
| BfoI | RGCGCY | 1 cut(s) | 897 |
| BfuI | GTATCC | 1 cut(s) | 880 |
| BisI | GCNGC | 6 cut(s) | 897, 1086, 1334, 1359, 1362, 1365 |
| BlsI | GCNGC | 6 cut(s) | 898, 1087, 1335, 1360, 1363, 1366 |
| Bme1390I | CCNGG | 1 cut(s) | 1317 |
| Bme18I | GGWCC | 2 cut(s) | 980, 1239 |
| BmeT110I | CYCGRG | 1 cut(s) | 1004 |
| BmgT120I | GGNCC | 3 cut(s) | 467, 980, 1239 |
| BmiI | GGNNCC | 4 cut(s) | 839, 981, 1161, 1344 |
| BmrFI | CCNGG | 1 cut(s) | 1317 |
| BmsI | GCATC | 2 cut(s) | 1093, 1345 |
| BpiI | GAAGAC | 1 cut(s) | 914 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 277, 309 |
| BpmI | CTGGAG | 1 cut(s) | 1014 |
| Bpu10I | CCTNAGC | 3 cut(s) | 330, 447, 564 |
| Bpu14I | TTCGAA | 1 cut(s) | 1050 |
| BsaI | GGTCTC | 1 cut(s) | 945 |
| BsaWI | WCCGGW | 1 cut(s) | 1339 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1012, 1042 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 805 |
| Bse1I | ACTGG | 2 cut(s) | 205, 1031 |
| BseAI | TCCGGA | 1 cut(s) | 1339 |
| BseBI | CCWGG | 1 cut(s) | 1317 |
| BseGI | GGATG | 5 cut(s) | 422, 539, 587, 652, 1336 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 805 |
| BseNI | ACTGG | 2 cut(s) | 205, 1031 |
| BseRI | GAGGAG | 2 cut(s) | 65, 519 |
| BseSI | GKGCMC | 2 cut(s) | 352, 586 |
| BseXI | GCAGC | 6 cut(s) | 883, 1097, 1345, 1370, 1373, 1376 |
| BshFI | GGCC | 2 cut(s) | 289, 468 |
| BshNI | GGYRCC | 1 cut(s) | 1159 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1004 |
| BsiSI | CCGG | 2 cut(s) | 65, 1340 |
| BslFI | GGGAC | 1 cut(s) | 1306 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 805 |
| BsmAI | GTCTC | 1 cut(s) | 945 |
| BsmFI | GGGAC | 1 cut(s) | 1306 |
| BsmI | GAATGC | 1 cut(s) | 253 |
| BsnI | GGCC | 2 cut(s) | 289, 468 |
| Bso31I | GGTCTC | 1 cut(s) | 945 |
| BsoBI | CYCGRG | 1 cut(s) | 1004 |
| Bsp119I | TTCGAA | 1 cut(s) | 1050 |
| Bsp1286I | GDGCHC | 2 cut(s) | 352, 586 |
| Bsp13I | TCCGGA | 1 cut(s) | 1339 |
| Bsp143I | GATC | 9 cut(s) | 88, 136, 629, 649, 808, 826, 837, 1062, 1273 |
| BspACI | CCGC | 3 cut(s) | 219, 240, 1198 |
| BspANI | GGCC | 2 cut(s) | 289, 468 |
| BspEI | TCCGGA | 1 cut(s) | 1339 |
| BspLI | GGNNCC | 4 cut(s) | 839, 981, 1161, 1344 |
| BspMAI | CTGCAG | 2 cut(s) | 301, 796 |
| BspPI | GGATC | 6 cut(s) | 637, 816, 821, 832, 845, 1070 |
| BspQI | GCTCTTC | 1 cut(s) | 1323 |
| BspT104I | TTCGAA | 1 cut(s) | 1050 |
| BspT107I | GGYRCC | 1 cut(s) | 1159 |
| BspTNI | GGTCTC | 1 cut(s) | 945 |
| BsrBI | CCGCTC | 1 cut(s) | 240 |
| BsrI | ACTGG | 2 cut(s) | 205, 1031 |
| BssMI | GATC | 9 cut(s) | 88, 136, 629, 649, 808, 826, 837, 1062, 1273 |
| BssSI | CACGAG | 1 cut(s) | 750 |
| Bst2BI | CACGAG | 1 cut(s) | 750 |
| Bst2UI | CCWGG | 1 cut(s) | 1317 |
| Bst4CI | ACNGT | 5 cut(s) | 111, 364, 850, 941, 1239 |
| Bst6I | CTCTTC | 2 cut(s) | 1062, 1323 |
| BstBI | TTCGAA | 1 cut(s) | 1050 |
| BstC8I | GCNNGC | 4 cut(s) | 29, 348, 582, 1369 |
| BstDEI | CTNAG | 5 cut(s) | 173, 330, 447, 564, 1277 |
| BstEII | GGTNACC | 1 cut(s) | 774 |
| BstF5I | GGATG | 5 cut(s) | 422, 539, 587, 652, 1336 |
| BstH2I | RGCGCY | 1 cut(s) | 897 |
| BstHHI | GCGC | 1 cut(s) | 896 |
| BstKTI | GATC | 9 cut(s) | 91, 139, 632, 652, 811, 829, 840, 1065, 1276 |
| BstMAI | GTCTC | 1 cut(s) | 945 |
| BstMBI | GATC | 9 cut(s) | 88, 136, 629, 649, 808, 826, 837, 1062, 1273 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 24, 1342, 1364, 1440 |
| BstNI | CCWGG | 1 cut(s) | 1317 |
| BstNSI | RCATGY | 1 cut(s) | 1130 |
| BstPI | GGTNACC | 1 cut(s) | 774 |
| BstSCI | CCNGG | 1 cut(s) | 1315 |
| BstSFI | CTRYAG | 2 cut(s) | 297, 792 |
| BstSLI | GKGCMC | 2 cut(s) | 352, 586 |
| BstV1I | GCAGC | 6 cut(s) | 883, 1097, 1345, 1370, 1373, 1376 |
| BstV2I | GAAGAC | 1 cut(s) | 914 |
| BstX2I | RGATCY | 1 cut(s) | 837 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1208 |
| BstYI | RGATCY | 1 cut(s) | 837 |
| BsuI | GTATCC | 1 cut(s) | 880 |
| BsuRI | GGCC | 2 cut(s) | 289, 468 |
| BtsCI | GGATG | 5 cut(s) | 422, 539, 587, 652, 1336 |
| BtsI | GCAGTG | 1 cut(s) | 306 |
| BtsIMutI | CAGTG | 2 cut(s) | 306, 1119 |
| Cac8I | GCNNGC | 4 cut(s) | 29, 348, 582, 1369 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1088 |
| CfoI | GCGC | 1 cut(s) | 896 |
| Cfr13I | GGNCC | 3 cut(s) | 467, 980, 1239 |
| CseI | GACGC | 1 cut(s) | 744 |
| Csp6I | GTAC | 2 cut(s) | 1160, 1258 |
| CviAII | CATG | 2 cut(s) | 14, 1127 |
| CviQI | GTAC | 2 cut(s) | 1160, 1258 |
| DdeI | CTNAG | 5 cut(s) | 173, 330, 447, 564, 1277 |
| DpnI | GATC | 9 cut(s) | 90, 138, 631, 651, 810, 828, 839, 1064, 1275 |
| DpnII | GATC | 9 cut(s) | 88, 136, 629, 649, 808, 826, 837, 1062, 1273 |
| Eam1104I | CTCTTC | 2 cut(s) | 1062, 1323 |
| EarI | CTCTTC | 2 cut(s) | 1062, 1323 |
| Eco31I | GGTCTC | 1 cut(s) | 945 |
| Eco47I | GGWCC | 2 cut(s) | 980, 1239 |
| Eco47III | AGCGCT | 1 cut(s) | 895 |
| Eco57I | CTGAAG | 3 cut(s) | 1110, 1328, 1347 |
| Eco88I | CYCGRG | 1 cut(s) | 1004 |
| Eco91I | GGTNACC | 1 cut(s) | 774 |
| EcoO65I | GGTNACC | 1 cut(s) | 774 |
| EcoRI | GAATTC | 1 cut(s) | 1046 |
| EcoRII | CCWGG | 1 cut(s) | 1315 |
| FaeI | CATG | 2 cut(s) | 17, 1130 |
| FaqI | GGGAC | 1 cut(s) | 1306 |
| FatI | CATG | 2 cut(s) | 13, 1126 |
| FauI | CCCGC | 3 cut(s) | 226, 233, 1205 |
| Fnu4HI | GCNGC | 6 cut(s) | 897, 1086, 1334, 1359, 1362, 1365 |
| FokI | GGATG | 5 cut(s) | 409, 526, 574, 659, 1323 |
| Fsp4HI | GCNGC | 6 cut(s) | 897, 1086, 1334, 1359, 1362, 1365 |
| FspBI | CTAG | 3 cut(s) | 24, 1182, 1230 |
| GlaI | GCGC | 1 cut(s) | 895 |
| GluI | GCNGC | 6 cut(s) | 897, 1086, 1334, 1359, 1362, 1365 |
| GsuI | CTGGAG | 1 cut(s) | 1014 |
| HaeII | RGCGCY | 1 cut(s) | 897 |
| HaeIII | GGCC | 2 cut(s) | 289, 468 |
| HapII | CCGG | 2 cut(s) | 65, 1340 |
| HgaI | GACGC | 1 cut(s) | 744 |
| HhaI | GCGC | 1 cut(s) | 896 |
| Hin1II | CATG | 2 cut(s) | 17, 1130 |
| Hin6I | GCGC | 1 cut(s) | 894 |
| HinP1I | GCGC | 1 cut(s) | 894 |
| HindIII | AAGCTT | 2 cut(s) | 29, 1310 |
| HinfI | GANTC | 6 cut(s) | 665, 675, 785, 908, 1079, 1322 |
| HpaII | CCGG | 2 cut(s) | 65, 1340 |
| HphI | GGTGA | 3 cut(s) | 408, 601, 757 |
| Hpy166II | GTNNAC | 3 cut(s) | 664, 1016, 1478 |
| Hpy8I | GTNNAC | 3 cut(s) | 664, 1016, 1478 |
| Hpy99I | CGWCG | 2 cut(s) | 1464, 1494 |
| HpyAV | CCTTC | 2 cut(s) | 423, 1258 |
| HpyCH4III | ACNGT | 5 cut(s) | 111, 364, 850, 941, 1239 |
| HpyCH4IV | ACGT | 3 cut(s) | 372, 1260, 1480 |
| HpyCH4V | TGCA | 6 cut(s) | 125, 299, 551, 794, 1130, 1434 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 24, 1342, 1364, 1440 |
| HpyF3I | CTNAG | 5 cut(s) | 173, 330, 447, 564, 1277 |
| HpySE526I | ACGT | 3 cut(s) | 372, 1260, 1480 |
| Hsp92II | CATG | 2 cut(s) | 17, 1130 |
| HspAI | GCGC | 1 cut(s) | 894 |
| Kpn2I | TCCGGA | 1 cut(s) | 1339 |
| KpnI | GGTACC | 1 cut(s) | 1163 |
| Kzo9I | GATC | 9 cut(s) | 88, 136, 629, 649, 808, 826, 837, 1062, 1273 |
| LguI | GCTCTTC | 1 cut(s) | 1323 |
| LmnI | GCTCC | 3 cut(s) | 237, 891, 1342 |
| Lsp1109I | GCAGC | 6 cut(s) | 883, 1097, 1345, 1370, 1373, 1376 |
| LweI | GCATC | 2 cut(s) | 1093, 1345 |
| MaeI | CTAG | 3 cut(s) | 24, 1182, 1230 |
| MaeII | ACGT | 3 cut(s) | 372, 1260, 1480 |
| MaeIII | GTNAC | 2 cut(s) | 763, 774 |
| MalI | GATC | 9 cut(s) | 90, 138, 631, 651, 810, 828, 839, 1064, 1275 |
| MbiI | CCGCTC | 1 cut(s) | 240 |
| MboI | GATC | 9 cut(s) | 88, 136, 629, 649, 808, 826, 837, 1062, 1273 |
| MboII | GAAGA | 5 cut(s) | 612, 914, 1079, 1103, 1340 |
| MflI | RGATCY | 1 cut(s) | 837 |
| MhlI | GDGCHC | 2 cut(s) | 352, 586 |
| MluCI | AATT | 4 cut(s) | 998, 1046, 1053, 1300 |
| MlyI | GAGTC | 2 cut(s) | 659, 917 |
| MmeI | TCCRAC | 5 cut(s) | 93, 141, 189, 897, 1007 |
| MroI | TCCGGA | 1 cut(s) | 1339 |
| MroXI | GAANNNNTTC | 3 cut(s) | 264, 363, 674 |
| MseI | TTAA | 7 cut(s) | 105, 153, 201, 375, 492, 1220, 1510 |
| MslI | CAYNNNNRTG | 6 cut(s) | 345, 462, 579, 641, 1131, 1206 |
| MspA1I | CMGCKG | 1 cut(s) | 1088 |
| MspI | CCGG | 2 cut(s) | 65, 1340 |
| MspR9I | CCNGG | 1 cut(s) | 1317 |
| Mva1269I | GAATGC | 1 cut(s) | 253 |
| MvaI | CCWGG | 1 cut(s) | 1317 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 24, 1342, 1364, 1440 |
| NdeII | GATC | 9 cut(s) | 88, 136, 629, 649, 808, 826, 837, 1062, 1273 |
| NlaIII | CATG | 2 cut(s) | 17, 1130 |
| NlaIV | GGNNCC | 4 cut(s) | 839, 981, 1161, 1344 |
| NmuCI | GTSAC | 1 cut(s) | 763 |
| NspI | RCATGY | 1 cut(s) | 1130 |
| NspV | TTCGAA | 1 cut(s) | 1050 |
| PaeR7I | CTCGAG | 1 cut(s) | 1004 |
| PciSI | GCTCTTC | 1 cut(s) | 1323 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1486 |
| PctI | GAATGC | 1 cut(s) | 253 |
| PdmI | GAANNNNTTC | 3 cut(s) | 264, 363, 674 |
| PfeI | GAWTC | 4 cut(s) | 675, 785, 1079, 1322 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 805 |
| PfoI | TCCNGGA | 1 cut(s) | 1315 |
| PkrI | GCNGC | 6 cut(s) | 898, 1087, 1335, 1360, 1363, 1366 |
| PleI | GAGTC | 2 cut(s) | 659, 916 |
| PpsI | GAGTC | 2 cut(s) | 659, 916 |
| Psp6I | CCWGG | 1 cut(s) | 1315 |
| PspEI | GGTNACC | 1 cut(s) | 774 |
| PspGI | CCWGG | 1 cut(s) | 1315 |
| PspN4I | GGNNCC | 4 cut(s) | 839, 981, 1161, 1344 |
| PspPI | GGNCC | 3 cut(s) | 467, 980, 1239 |
| PstI | CTGCAG | 2 cut(s) | 301, 796 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1088 |
| PsuI | RGATCY | 1 cut(s) | 837 |
| PvuII | CAGCTG | 1 cut(s) | 1088 |
| RsaI | GTAC | 2 cut(s) | 1161, 1259 |
| RsaNI | GTAC | 2 cut(s) | 1160, 1258 |
| RseI | CAYNNNNRTG | 6 cut(s) | 345, 462, 579, 641, 1131, 1206 |
| SapI | GCTCTTC | 1 cut(s) | 1323 |
| SaqAI | TTAA | 7 cut(s) | 105, 153, 201, 375, 492, 1220, 1510 |
| SatI | GCNGC | 6 cut(s) | 897, 1086, 1334, 1359, 1362, 1365 |
| Sau3AI | GATC | 9 cut(s) | 88, 136, 629, 649, 808, 826, 837, 1062, 1273 |
| Sau96I | GGNCC | 3 cut(s) | 467, 980, 1239 |
| SchI | GAGTC | 2 cut(s) | 659, 917 |
| ScrFI | CCNGG | 1 cut(s) | 1317 |
| SduI | GDGCHC | 2 cut(s) | 352, 586 |
| SfaNI | GCATC | 2 cut(s) | 1093, 1345 |
| SfcI | CTRYAG | 2 cut(s) | 297, 792 |
| Sfr274I | CTCGAG | 1 cut(s) | 1004 |
| SfuI | TTCGAA | 1 cut(s) | 1050 |
| SinI | GGWCC | 2 cut(s) | 980, 1239 |
| SlaI | CTCGAG | 1 cut(s) | 1004 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 345, 462, 579, 641, 1131, 1206 |
| SmlI | CTYRAG | 1 cut(s) | 1004 |
| SmoI | CTYRAG | 1 cut(s) | 1004 |
| Sse9I | AATT | 4 cut(s) | 998, 1046, 1053, 1300 |
| SsiI | CCGC | 3 cut(s) | 219, 240, 1198 |
| SspMI | CTAG | 3 cut(s) | 24, 1182, 1230 |
| StyD4I | CCNGG | 1 cut(s) | 1315 |
| TaaI | ACNGT | 5 cut(s) | 111, 364, 850, 941, 1239 |
| TaiI | ACGT | 3 cut(s) | 375, 1263, 1483 |
| TaqI | TCGA | 5 cut(s) | 668, 1005, 1024, 1050, 1065 |
| TasI | AATT | 4 cut(s) | 998, 1046, 1053, 1300 |
| TfiI | GAWTC | 4 cut(s) | 675, 785, 1079, 1322 |
| Tru1I | TTAA | 7 cut(s) | 105, 153, 201, 375, 492, 1220, 1510 |
| Tru9I | TTAA | 7 cut(s) | 105, 153, 201, 375, 492, 1220, 1510 |
| TscAI | CASTG | 2 cut(s) | 306, 1126 |
| TseFI | GTSAC | 1 cut(s) | 763 |
| TseI | GCWGC | 6 cut(s) | 896, 1085, 1333, 1358, 1361, 1364 |
| Tsp45I | GTSAC | 1 cut(s) | 763 |
| TspDTI | ATGAA | 2 cut(s) | 612, 914 |
| TspGWI | ACGGA | 2 cut(s) | 797, 1478 |
| TspRI | CASTG | 2 cut(s) | 306, 1126 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 805 |
| VpaK11BI | GGWCC | 2 cut(s) | 980, 1239 |
| XapI | RAATTY | 2 cut(s) | 1046, 1300 |
| XceI | RCATGY | 1 cut(s) | 1130 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 880 |
| XhoI | CTCGAG | 1 cut(s) | 1004 |
| XmnI | GAANNNNTTC | 3 cut(s) | 264, 363, 674 |
| XspI | CTAG | 3 cut(s) | 24, 1182, 1230 |