AT2G11520

Calmodulin-binding receptor-like cytoplasmic kinase 3

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
4618545 .. 4621722
3178 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G11520.1

Sequence Viewer

Length: 1533 bp
ATGGGTGGAGATGATTTGAGCTTCACAAGATTGGTGATTACTGCTTTGTTTGGTCTGTTAATGTTGTTACAAATCAAGGAAACTTCTGCATCAACATCCTTTGTAAGCTCGAGTGTTTGTAAGTCTGATCACTTGACCTACACAAAGCCTTATCAACAAGGGAGTTTGTTCACAATTAACGGTAATCCGGTGGAGAAACTCCGGTTTTGCGAAGCTTTACGGTTTCACAAAGCCAATGGTTGTATCTTTGAGGATTCTTTTAGTGATGACTTCTGCACAATTCACTCTCTACTAGGGAGAAGGTTTTTGGAAGAAAAAACTGTAAAAGATTCCAAAAATAGTAAGCCTAAAACTGAATATAGCCATGTTAAAGTTAGCATAGCAGGAAGTGGGTTTCTTCTCTTGTGTTGCGCTCTTTGTTGTCCTTGCTTTCATAAAGAGAGGAAAGCAAATAGTCATGAAGTTCTACCTAAAGAATCTAACTCAGTGCACCAAGTTTCTTCTTTTGAAATGAGCCCTTCTTCTGAGAAGATTCCACAAAGTCCATTCCGAGCACCACCAAGTCCATCCCGCGTACCGCAGAGTCCATCTAGATATGCTATGTCCCCAAGGCCTAGTAGACTGGGACCTTTGAATCTGACCATGAGTCAGATTAATACAGCAACTGGTAATTTTGCAGACAGTCACCAAATTGGTGAAGGAGGCTTTGGTGTAGTCTTTAAAGGCGTTCTAGATGATGGCCAGGTTGTTGCCATAAAACGAGCCAAAAAGGAACACTTTGAGAATCTGCGAACGGAGTTTAAAAGTGAAGTTGACCTTTTGTCTAAAATTGGCCACCGGAACCTAGTGAAGCTTCTTGGTTATGTTGACAAAGGAGACGAGCGACTTATCATAACTGAGTATGTCAGAAATGGTACACTCCGCGATCACTTGGACGGTGCTCGTGGAACTAAACTTAATTTCAATCAAAGGTTGGAGATTGTTATTGATGTCTGCCATGGCTTAACCTATCTCCATTCTTATGCAGAAAGACAGATAATTCACCGTGACATAAAATCGTCGAACATTCTACTCACAGATAGCATGAGAGCCAAAGTAGCAGACTTCGGCTTTGCGAGAGGCGGTCCTACTGACTCGAACCAGACTCACATTTTAACTCAAGTGAAAGGAACCGTTGGTTATCTCGATCCTGAGTACATGAAAACTTATCATCTCACTGCTAAAAGCGATGTTTACTCGTTCGGGATTTTGCTTGTGGAGATACTCACAGGCCGTCGTCCAGTGGAGGCCAAGCGACTTCCTGATGAGAGGATTACGGTCCGATGGGCATTCGACAAGTACAATGAAGGGCGAGTTTTTGAACTAGTGGATCCTAACGCGAGGGAACGAGTAGATGAGAAGATACTAAGGAAGATGTTTAGTTTGGCATTTCAATGTGCTGCTCCTACTAAAAAAGAGCGGCCTGACATGGAAGCTGTTGGGAAGCAGCTTTGGGCTATAAGATCAAGTTATCTCAGGCGGTCAATGGAATAA

Protein Analysis

510

Amino Acids

57.46

Weight (kDa)

9.11

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 227 - 498 1.1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 229 - 497 3.1e-52 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1459
AccI GTMKAC 1 cut(s) 619
AccII CGCG 3 cut(s) 573, 924, 1379
AciI CCGC 6 cut(s) 571, 578, 922, 1122, 1459, 1519
AclWI GGATC 3 cut(s) 1181, 1364, 1377
AcoI YGGCCR 2 cut(s) 739, 832
AfaI GTAC 4 cut(s) 576, 916, 1196, 1340
AgsI TTSAA 5 cut(s) 509, 634, 964, 1361, 1433
AhdI GACNNNNNGTC 2 cut(s) 645, 820
AhlI ACTAGT 1 cut(s) 1363
AjnI CCWGG 1 cut(s) 741
AjuI GAANNNNNNNTTGG 2 cut(s) 690, 722
AluBI AGCT 6 cut(s) 21, 108, 215, 853, 1475, 1489
AluI AGCT 6 cut(s) 21, 108, 215, 853, 1475, 1489
Alw21I GWGCWC 3 cut(s) 492, 556, 943
Alw26I GTCTC 1 cut(s) 870
Alw44I GTGCAC 1 cut(s) 488
AlwI GGATC 3 cut(s) 1181, 1364, 1377
AlwNI CAGNNNCTG 1 cut(s) 665
Ama87I CYCGRG 1 cut(s) 109
AoxI GGCC 6 cut(s) 611, 739, 832, 1270, 1287, 1460
ApaLI GTGCAC 1 cut(s) 488
ApeKI GCWGC 2 cut(s) 1439, 1486
ArsI GACNNNNNNTTYG 2 cut(s) 1094, 1126
AseI ATTAAT 1 cut(s) 654
AspLEI GCGC 1 cut(s) 413
AspS9I GGNCC 3 cut(s) 626, 1124, 1318
AsuHPI GGTGA 4 cut(s) 46, 677, 707, 1034
AvaI CYCGRG 1 cut(s) 109
AvaII GGWCC 3 cut(s) 626, 1124, 1318
BaeGI GKGCMC 1 cut(s) 492
BalI TGGCCA 2 cut(s) 741, 834
BamHI GGATCC 1 cut(s) 1369
BanII GRGCYC 1 cut(s) 518
BauI CACGAG 1 cut(s) 942
Bbv12I GWGCWC 3 cut(s) 492, 556, 943
BbvI GCAGC 2 cut(s) 1426, 1498
BccI CCATC 4 cut(s) 574, 595, 731, 1317
BceAI ACGGC 1 cut(s) 1257
BciT130I CCWGG 1 cut(s) 743
BclI TGATCA 1 cut(s) 127
BcoDI GTCTC 1 cut(s) 870
BcuI ACTAGT 1 cut(s) 1363
BfaI CTAG 6 cut(s) 293, 591, 615, 731, 845, 1364
BisI GCNGC 3 cut(s) 1440, 1460, 1487
BlsI GCNGC 3 cut(s) 1441, 1461, 1488
Bme1390I CCNGG 1 cut(s) 743
Bme18I GGWCC 3 cut(s) 626, 1124, 1318
BmeRI GACNNNNNGTC 2 cut(s) 645, 820
BmeT110I CYCGRG 1 cut(s) 109
BmgT120I GGNCC 3 cut(s) 626, 1124, 1318
BmiI GGNNCC 4 cut(s) 627, 842, 1171, 1371
BmrFI CCNGG 1 cut(s) 743
BmrI ACTGGG 1 cut(s) 632
BmsI GCATC 1 cut(s) 98
BmuI ACTGGG 1 cut(s) 632
BpuEI CTTGAG 1 cut(s) 1143
BsaJI CCNNGG 2 cut(s) 608, 997
BsaWI WCCGGW 3 cut(s) 187, 201, 837
Bse1I ACTGG 3 cut(s) 627, 670, 1280
BseBI CCWGG 1 cut(s) 743
BseDI CCNNGG 2 cut(s) 608, 997
BseGI GGATG 2 cut(s) 95, 566
BseMII CTCAG 5 cut(s) 498, 516, 888, 1182, 1528
BseNI ACTGG 3 cut(s) 627, 670, 1280
BseSI GKGCMC 1 cut(s) 492
BseXI GCAGC 2 cut(s) 1426, 1498
BsgI GTGCAG 1 cut(s) 259
Bsh1236I CGCG 3 cut(s) 573, 924, 1379
BshFI GGCC 6 cut(s) 613, 741, 834, 1272, 1289, 1462
BsiHKAI GWGCWC 3 cut(s) 492, 556, 943
BsiHKCI CYCGRG 1 cut(s) 109
BsiSI CCGG 3 cut(s) 188, 202, 838
BslFI GGGAC 2 cut(s) 589, 639
BsmAI GTCTC 1 cut(s) 870
BsmBI CGTCTC 1 cut(s) 870
BsmFI GGGAC 2 cut(s) 589, 639
BsmI GAATGC 1 cut(s) 1328
BsnI GGCC 6 cut(s) 613, 741, 834, 1272, 1289, 1462
BsoBI CYCGRG 1 cut(s) 109
Bsp1286I GDGCHC 4 cut(s) 492, 518, 556, 943
Bsp143I GATC 5 cut(s) 127, 925, 1186, 1369, 1502
Bsp19I CCATGG 1 cut(s) 997
BspACI CCGC 6 cut(s) 571, 578, 922, 1122, 1459, 1519
BspANI GGCC 6 cut(s) 613, 741, 834, 1272, 1289, 1462
BspCNI CTCAG 5 cut(s) 497, 517, 889, 1183, 1527
BspFNI CGCG 3 cut(s) 573, 924, 1379
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 4 cut(s) 627, 842, 1171, 1371
BspPI GGATC 3 cut(s) 1181, 1364, 1377
BsrBI CCGCTC 1 cut(s) 1459
BsrI ACTGG 3 cut(s) 627, 670, 1280
BssECI CCNNGG 2 cut(s) 608, 997
BssMI GATC 5 cut(s) 127, 925, 1186, 1369, 1502
BssSI CACGAG 1 cut(s) 942
BssT1I CCWWGG 2 cut(s) 608, 997
Bst2BI CACGAG 1 cut(s) 942
Bst2UI CCWGG 1 cut(s) 743
Bst4CI ACNGT 8 cut(s) 182, 222, 322, 683, 938, 1046, 1174, 1318
BstDEI CTNAG 6 cut(s) 484, 525, 897, 1191, 1406, 1514
BstDSI CCRYGG 1 cut(s) 997
BstF5I GGATG 2 cut(s) 95, 566
BstFNI CGCG 3 cut(s) 573, 924, 1379
BstHHI GCGC 1 cut(s) 413
BstKTI GATC 5 cut(s) 130, 928, 1189, 1372, 1505
BstMAI GTCTC 1 cut(s) 870
BstMBI GATC 5 cut(s) 127, 925, 1186, 1369, 1502
BstMWI GCNNNNNNNGC 1 cut(s) 1097
BstNI CCWGG 1 cut(s) 743
BstSCI CCNGG 1 cut(s) 741
BstSLI GKGCMC 1 cut(s) 492
BstUI CGCG 3 cut(s) 573, 924, 1379
BstV1I GCAGC 2 cut(s) 1426, 1498
BstX2I RGATCY 1 cut(s) 1369
BstYI RGATCY 1 cut(s) 1369
BsuRI GGCC 6 cut(s) 613, 741, 834, 1272, 1289, 1462
BtgI CCRYGG 1 cut(s) 997
BtgZI GCGATG 1 cut(s) 1242
BtsCI GGATG 2 cut(s) 95, 566
BtsI GCAGTG 1 cut(s) 1215
BtsIMutI CAGTG 3 cut(s) 492, 1215, 1287
CaiI CAGNNNCTG 1 cut(s) 665
CciI TCATGA 1 cut(s) 457
CfoI GCGC 1 cut(s) 413
Cfr13I GGNCC 3 cut(s) 626, 1124, 1318
CpoI CGGWCCG 1 cut(s) 1318
Csp6I GTAC 4 cut(s) 575, 915, 1195, 1339
CspI CGGWCCG 1 cut(s) 1318
CviAII CATG 7 cut(s) 365, 458, 643, 998, 1084, 1198, 1468
CviQI GTAC 4 cut(s) 575, 915, 1195, 1339
DdeI CTNAG 6 cut(s) 484, 525, 897, 1191, 1406, 1514
DpnI GATC 5 cut(s) 129, 927, 1188, 1371, 1504
DpnII GATC 5 cut(s) 127, 925, 1186, 1369, 1502
DraI TTTAAA 2 cut(s) 721, 802
DriI GACNNNNNGTC 2 cut(s) 645, 820
EaeI YGGCCR 2 cut(s) 739, 832
Eam1105I GACNNNNNGTC 2 cut(s) 645, 820
Eco130I CCWWGG 2 cut(s) 608, 997
Eco147I AGGCCT 1 cut(s) 613
Eco24I GRGCYC 1 cut(s) 518
Eco47I GGWCC 3 cut(s) 626, 1124, 1318
Eco88I CYCGRG 1 cut(s) 109
EcoO109I RGGNCCY 1 cut(s) 626
EcoRII CCWGG 1 cut(s) 741
EcoT14I CCWWGG 2 cut(s) 608, 997
EcoT38I GRGCYC 1 cut(s) 518
ErhI CCWWGG 2 cut(s) 608, 997
Esp3I CGTCTC 1 cut(s) 870
FaeI CATG 7 cut(s) 368, 461, 646, 1001, 1087, 1201, 1471
FalI AAGNNNNNCTT 4 cut(s) 761, 793, 801, 833
FaqI GGGAC 2 cut(s) 589, 639
FatI CATG 7 cut(s) 364, 457, 642, 997, 1083, 1197, 1467
FauI CCCGC 1 cut(s) 578
FbaI TGATCA 1 cut(s) 127
FblI GTMKAC 1 cut(s) 619
Fnu4HI GCNGC 3 cut(s) 1440, 1460, 1487
FokI GGATG 2 cut(s) 82, 553
FriOI GRGCYC 1 cut(s) 518
Fsp4HI GCNGC 3 cut(s) 1440, 1460, 1487
FspBI CTAG 6 cut(s) 293, 591, 615, 731, 845, 1364
GlaI GCGC 1 cut(s) 412
GluI GCNGC 3 cut(s) 1440, 1460, 1487
HaeIII GGCC 6 cut(s) 613, 741, 834, 1272, 1289, 1462
HapII CCGG 3 cut(s) 188, 202, 838
HhaI GCGC 1 cut(s) 413
Hin1II CATG 7 cut(s) 368, 461, 646, 1001, 1087, 1201, 1471
Hin6I GCGC 1 cut(s) 411
HinP1I GCGC 1 cut(s) 411
HincII GTYRAC 2 cut(s) 814, 868
HindII GTYRAC 2 cut(s) 814, 868
HindIII AAGCTT 2 cut(s) 213, 851
HpaII CCGG 3 cut(s) 188, 202, 838
HphI GGTGA 4 cut(s) 46, 677, 707, 1034
Hpy166II GTNNAC 7 cut(s) 171, 490, 620, 814, 868, 917, 1234
Hpy188I TCNGA 7 cut(s) 127, 526, 551, 639, 651, 908, 1322
Hpy188III TCNNGA 7 cut(s) 458, 591, 731, 1184, 1190, 1243, 1301
Hpy8I GTNNAC 7 cut(s) 171, 490, 620, 814, 868, 917, 1234
Hpy99I CGWCG 2 cut(s) 1063, 1278
HpyAV CCTTC 4 cut(s) 294, 528, 692, 1340
HpyCH4III ACNGT 8 cut(s) 182, 222, 322, 683, 938, 1046, 1174, 1318
HpyCH4V TGCA 5 cut(s) 89, 276, 490, 677, 1025
HpyF10VI GCNNNNNNNGC 1 cut(s) 1097
HpyF3I CTNAG 6 cut(s) 484, 525, 897, 1191, 1406, 1514
Hsp92II CATG 7 cut(s) 368, 461, 646, 1001, 1087, 1201, 1471
HspAI GCGC 1 cut(s) 411
Ksp22I TGATCA 1 cut(s) 127
Kzo9I GATC 5 cut(s) 127, 925, 1186, 1369, 1502
LmnI GCTCC 1 cut(s) 1447
Lsp1109I GCAGC 2 cut(s) 1426, 1498
LweI GCATC 1 cut(s) 98
MaeI CTAG 6 cut(s) 293, 591, 615, 731, 845, 1364
MaeIII GTNAC 3 cut(s) 66, 683, 1046
MalI GATC 5 cut(s) 129, 927, 1188, 1371, 1504
MbiI CCGCTC 1 cut(s) 1459
MboI GATC 5 cut(s) 127, 925, 1186, 1369, 1502
MboII GAAGA 7 cut(s) 323, 389, 492, 513, 541, 1411, 1423
MflI RGATCY 1 cut(s) 1369
MhlI GDGCHC 4 cut(s) 492, 518, 556, 943
MlsI TGGCCA 2 cut(s) 741, 834
MluCI AATT 7 cut(s) 174, 279, 670, 690, 828, 958, 1038
MluNI TGGCCA 2 cut(s) 741, 834
MlyI GAGTC 4 cut(s) 592, 655, 1127, 1138
MmeI TCCRAC 1 cut(s) 954
MnlI CCTC 7 cut(s) 244, 435, 695, 1112, 1279, 1302, 1374
Mox20I TGGCCA 2 cut(s) 741, 834
MscI TGGCCA 2 cut(s) 741, 834
MseI TTAA 9 cut(s) 59, 177, 369, 654, 720, 801, 957, 1004, 1154
MslI CAYNNNNRTG 2 cut(s) 1020, 1432
Msp20I TGGCCA 2 cut(s) 741, 834
MspI CCGG 3 cut(s) 188, 202, 838
MspR9I CCNGG 1 cut(s) 743
Mva1269I GAATGC 1 cut(s) 1328
MvaI CCWGG 1 cut(s) 743
MvnI CGCG 3 cut(s) 573, 924, 1379
MwoI GCNNNNNNNGC 1 cut(s) 1097
NcoI CCATGG 1 cut(s) 997
NdeII GATC 5 cut(s) 127, 925, 1186, 1369, 1502
NlaIII CATG 7 cut(s) 368, 461, 646, 1001, 1087, 1201, 1471
NlaIV GGNNCC 4 cut(s) 627, 842, 1171, 1371
NmuCI GTSAC 2 cut(s) 683, 1046
PaeR7I CTCGAG 1 cut(s) 109
PagI TCATGA 1 cut(s) 457
PceI AGGCCT 1 cut(s) 613
PctI GAATGC 1 cut(s) 1328
PfeI GAWTC 6 cut(s) 254, 329, 476, 532, 634, 784
PkrI GCNGC 3 cut(s) 1441, 1461, 1488
PleI GAGTC 4 cut(s) 591, 654, 1127, 1138
PpsI GAGTC 4 cut(s) 591, 654, 1127, 1138
PpuMI RGGWCCY 1 cut(s) 626
PshBI ATTAAT 1 cut(s) 654
Psp5II RGGWCCY 1 cut(s) 626
Psp6I CCWGG 1 cut(s) 741
PspGI CCWGG 1 cut(s) 741
PspN4I GGNNCC 4 cut(s) 627, 842, 1171, 1371
PspPI GGNCC 3 cut(s) 626, 1124, 1318
PspPPI RGGWCCY 1 cut(s) 626
PspXI VCTCGAGB 1 cut(s) 109
PstNI CAGNNNCTG 1 cut(s) 665
PsuI RGATCY 1 cut(s) 1369
RsaI GTAC 4 cut(s) 576, 916, 1196, 1340
RsaNI GTAC 4 cut(s) 575, 915, 1195, 1339
RseI CAYNNNNRTG 2 cut(s) 1020, 1432
Rsr2I CGGWCCG 1 cut(s) 1318
RsrII CGGWCCG 1 cut(s) 1318
SaqAI TTAA 9 cut(s) 59, 177, 369, 654, 720, 801, 957, 1004, 1154
SatI GCNGC 3 cut(s) 1440, 1460, 1487
Sau3AI GATC 5 cut(s) 127, 925, 1186, 1369, 1502
Sau96I GGNCC 3 cut(s) 626, 1124, 1318
SchI GAGTC 4 cut(s) 592, 655, 1127, 1138
ScrFI CCNGG 1 cut(s) 743
SduI GDGCHC 4 cut(s) 492, 518, 556, 943
SfaNI GCATC 1 cut(s) 98
Sfr274I CTCGAG 1 cut(s) 109
SinI GGWCC 3 cut(s) 626, 1124, 1318
SlaI CTCGAG 1 cut(s) 109
SmiMI CAYNNNNRTG 2 cut(s) 1020, 1432
SmlI CTYRAG 2 cut(s) 109, 1158
SmoI CTYRAG 2 cut(s) 109, 1158
SpeI ACTAGT 1 cut(s) 1363
Sse9I AATT 7 cut(s) 174, 279, 670, 690, 828, 958, 1038
SseBI AGGCCT 1 cut(s) 613
SsiI CCGC 6 cut(s) 571, 578, 922, 1122, 1459, 1519
SspMI CTAG 6 cut(s) 293, 591, 615, 731, 845, 1364
StuI AGGCCT 1 cut(s) 613
StyD4I CCNGG 1 cut(s) 741
StyI CCWWGG 2 cut(s) 608, 997
TaaI ACNGT 8 cut(s) 182, 222, 322, 683, 938, 1046, 1174, 1318
TaqI TCGA 5 cut(s) 110, 1061, 1136, 1185, 1332
TasI AATT 7 cut(s) 174, 279, 670, 690, 828, 958, 1038
TatI WGTACW 2 cut(s) 1194, 1338
TauI GCSGC 1 cut(s) 1462
TfiI GAWTC 6 cut(s) 254, 329, 476, 532, 634, 784
Tru1I TTAA 9 cut(s) 59, 177, 369, 654, 720, 801, 957, 1004, 1154
Tru9I TTAA 9 cut(s) 59, 177, 369, 654, 720, 801, 957, 1004, 1154
TscAI CASTG 3 cut(s) 492, 1222, 1287
TseFI GTSAC 2 cut(s) 683, 1046
TseI GCWGC 2 cut(s) 1439, 1486
Tsp45I GTSAC 2 cut(s) 683, 1046
TspDTI ATGAA 4 cut(s) 422, 474, 1214, 1359
TspGWI ACGGA 1 cut(s) 809
TspRI CASTG 3 cut(s) 492, 1222, 1287
VneI GTGCAC 1 cut(s) 488
VpaK11BI GGWCC 3 cut(s) 626, 1124, 1318
VspI ATTAAT 1 cut(s) 654
XbaI TCTAGA 2 cut(s) 590, 730
XhoI CTCGAG 1 cut(s) 109
XmiI GTMKAC 1 cut(s) 619
XspI CTAG 6 cut(s) 293, 591, 615, 731, 845, 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.