pycom02g01910

Calmodulin-binding receptor-like cytoplasmic kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
1149921 .. 1152272
2352 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g01910.1

Sequence Viewer

Length: 1563 bp
ATGGGAGTTGGGCAGATTATCCCGTTTAGAATGGGCATCGCAGTGTTAAGTCTGTTGCTGCAATTGCCAGCTATCTTTGCATCCAAGTTTGTCATACAGTCAAAGGATTGTAGTGATCACATTGCCTATTCAAGCTCTCATGGTCATGAATTGTTTTACATAAACGGGAATTCAGTAGAGAAAACTATATTCTGTGCAGCTCTTCGGACATACTATGCAAATGGTTGCATTTTAGAAGGCAACCTTGGAAGTTACCATTGTCTATCAGACCTTTCACTAGTTGATTTTACCTTGAGGACAGGGAGGAAACTTCTGCAGAAGGAGTCAAGGGATAAATCCACTTTCGACAACAGAGAGGAAAAAAATGATTTTGCATATACGTCTGCGACGAAAAAGATTGGAATAGCAGCAAGTGGAATGTTTCTCACGTGTTGTGTTTTTCTATGTCCTTGCATTTTTAAGAAAAGGCGAGAAAGTGTGCACAGAGTTCTTGCAAGGGAGCCAAATTCAACGGATTCAGTTTTTTCTTTTGAAGTGAGTTCTTCAGATCCTGAAAAGATCCTGGCCAGTCCGCATCGTGTGCCACGTAGTCCACATCATGTGCCGCCTAGTCCTAGATTTTCAATGTCTCCAAAGCCCATTGGAATTGGATCAGTACATCTCAGTTTGAATCAGATTGTAAAAGTAACTCACAACTTCTCTCAATCGCAACAAATAGGTGAAGGAGGTTTTGGAACTGTATACAAGGCTCGGTTAGATGATGGCCAAGTGGTTTCTATCAAACGTGCAAAGAAGGAACACTTTGAGAATTTGCAAACTGAATTCAGCAGTGAAGTTGAACTGCTTGCCAAAATTGATCATCGGAATCTTGTAAAGCTACTAGGTTATGTTGATGAAGGAAACGAGCGTCTTATCATTACGGAGTATGTGCAGAACGGTACTCTTAGAGAACATCTGGATTGTCTGCATGGGAAAATCCTAGAGTTCAACCAGCGACTTGAAATTGCTATCGATGTTGCTCATGCCCTTACCTATCTTCACACATATTCTGAAAAACAAATCATCCATCGAGACGTGAAGTCCTCCAACATTCTTCTCACAGAAAGCATGAGAGCCAAAGTGGCCGATTTTGGGTTTGCAAGGCTTGGCCCGGTGGACACAGATCGATCACACATTTCAACCAAAGTGAAAGGAACTGTCGGTTATCTTGACCCTGAGTATATGAAAACCTATCAACTCACCCCGAAAAGTGATGTTTACTCGTTCGCGATCTTACTAATAGAAATTTTGACTGGCCGTCGTCCAGTGGAGTTGAAGCGACCTGTTGAAGAGCGGGTAACACTCAGATGGGCGTTCAAGAAGATGAATGAAGGCAGGGTGGCAGAATTGGTTGATCCATTGATGGAGGAAACTATAGATGCAGAGGTTCTGATGAAAACCTTCGATCTGGCGATCCAATGTGCAGCCCCCATCCGAGTTGATAGGCCGGACATGAAAGCGGTGGGAGAGCAGTTGTGGACAATAAGGGCAGACTACCTTAGAAGTGTCAAGAGAGGGCAGTAG

Protein Analysis

521

Amino Acids

58.68

Weight (kDa)

8.63

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 234 - 440 5.3e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 235 - 505 7.8e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1333
AccI GTMKAC 1 cut(s) 741
AccII CGCG 1 cut(s) 1268
AciI CCGC 4 cut(s) 572, 605, 1333, 1499
AclWI GGATC 5 cut(s) 542, 553, 658, 1388, 1447
AcoI YGGCCR 4 cut(s) 564, 763, 1122, 1294
AcsI RAATTY 5 cut(s) 169, 505, 808, 821, 1284
AcuI CTGAAG 1 cut(s) 528
AcvI CACGTG 1 cut(s) 429
AfaI GTAC 2 cut(s) 657, 940
AfiI CCNNNNNNNGG 1 cut(s) 1131
AflIII ACRYGT 1 cut(s) 428
AhdI GACNNNNNGTC 2 cut(s) 1078, 1296
AhlI ACTAGT 1 cut(s) 277
AjiI CACGTC 1 cut(s) 1075
AjnI CCWGG 1 cut(s) 561
AjuI GAANNNNNNNTTGG 4 cut(s) 228, 260, 714, 746
AluBI AGCT 4 cut(s) 71, 135, 200, 877
AluI AGCT 4 cut(s) 71, 135, 200, 877
Alw21I GWGCWC 1 cut(s) 483
Alw26I GTCTC 2 cut(s) 633, 1065
Alw44I GTGCAC 1 cut(s) 479
AlwI GGATC 5 cut(s) 542, 553, 658, 1388, 1447
AlwNI CAGNNNCTG 1 cut(s) 551
AoxI GGCC 6 cut(s) 564, 763, 1122, 1147, 1294, 1484
ApaLI GTGCAC 1 cut(s) 479
ApeKI GCWGC 4 cut(s) 58, 197, 407, 1463
ApoI RAATTY 5 cut(s) 169, 505, 808, 821, 1284
Asp700I GAANNNNTTC 1 cut(s) 1439
AspS9I GGNCC 1 cut(s) 1148
AsuC2I CCSGG 1 cut(s) 1151
AsuHPI GGTGA 2 cut(s) 731, 1231
BaeGI GKGCMC 1 cut(s) 483
BalI TGGCCA 2 cut(s) 566, 765
BbrPI CACGTG 1 cut(s) 429
Bbv12I GWGCWC 1 cut(s) 483
BbvI GCAGC 4 cut(s) 45, 209, 419, 1475
BccI CCATC 5 cut(s) 755, 1074, 1341, 1396, 1478
BceAI ACGGC 1 cut(s) 1281
BciT130I CCWGG 1 cut(s) 563
BclI TGATCA 2 cut(s) 115, 856
BcnI CCSGG 1 cut(s) 1151
BcoDI GTCTC 2 cut(s) 633, 1065
BcuI ACTAGT 1 cut(s) 277
BfaI CTAG 5 cut(s) 278, 609, 615, 881, 980
BfmI CTRYAG 2 cut(s) 314, 1413
BglI GCCNNNNNGGC 1 cut(s) 1121
BisI GCNGC 5 cut(s) 59, 198, 408, 605, 1464
BlsI GCNGC 5 cut(s) 60, 199, 409, 606, 1465
Bme1390I CCNGG 2 cut(s) 563, 1151
BmeRI GACNNNNNGTC 2 cut(s) 1078, 1296
BmgBI CACGTC 1 cut(s) 1075
BmgT120I GGNCC 1 cut(s) 1148
BmiI GGNNCC 1 cut(s) 501
BmrFI CCNGG 2 cut(s) 563, 1151
BmsI GCATC 4 cut(s) 45, 89, 583, 1408
BpuEI CTTGAG 1 cut(s) 313
BpuMI CCSGG 1 cut(s) 1151
Bsa29I ATCGAT 2 cut(s) 1011, 1165
BsaAI YACGTR 2 cut(s) 429, 587
BsaJI CCNNGG 1 cut(s) 244
Bsc4I CCNNNNNNNGG 1 cut(s) 1131
Bse1I ACTGG 3 cut(s) 567, 1297, 1304
Bse3DI GCAATG 1 cut(s) 120
BseBI CCWGG 1 cut(s) 563
BseCI ATCGAT 2 cut(s) 1011, 1165
BseDI CCNNGG 1 cut(s) 244
BseGI GGATG 3 cut(s) 80, 1062, 1470
BseLI CCNNNNNNNGG 1 cut(s) 1131
BseMI GCAATG 1 cut(s) 120
BseMII CTCAG 3 cut(s) 676, 1206, 1357
BseNI ACTGG 3 cut(s) 567, 1297, 1304
BseSI GKGCMC 1 cut(s) 483
BseXI GCAGC 4 cut(s) 45, 209, 419, 1475
BsgI GTGCAG 3 cut(s) 216, 950, 1482
Bsh1236I CGCG 1 cut(s) 1268
BshFI GGCC 6 cut(s) 566, 765, 1124, 1149, 1296, 1486
BshVI ATCGAT 2 cut(s) 1011, 1165
BsiHKAI GWGCWC 1 cut(s) 483
BsiSI CCGG 2 cut(s) 1151, 1487
BslI CCNNNNNNNGG 1 cut(s) 1131
BsmAI GTCTC 2 cut(s) 633, 1065
BsmBI CGTCTC 1 cut(s) 1065
BsnI GGCC 6 cut(s) 566, 765, 1124, 1149, 1296, 1486
Bsp1286I GDGCHC 1 cut(s) 483
Bsp68I TCGCGA 1 cut(s) 1268
BspACI CCGC 4 cut(s) 572, 605, 1333, 1499
BspANI GGCC 6 cut(s) 566, 765, 1124, 1149, 1296, 1486
BspCNI CTCAG 3 cut(s) 675, 1207, 1356
BspDI ATCGAT 2 cut(s) 1011, 1165
BspFNI CGCG 1 cut(s) 1268
BspHI TCATGA 1 cut(s) 145
BspLI GGNNCC 1 cut(s) 501
BspMAI CTGCAG 1 cut(s) 318
BspPI GGATC 5 cut(s) 542, 553, 658, 1388, 1447
BspQI GCTCTTC 2 cut(s) 207, 1323
BsrBI CCGCTC 1 cut(s) 1333
BsrDI GCAATG 1 cut(s) 120
BsrI ACTGG 3 cut(s) 567, 1297, 1304
BssECI CCNNGG 1 cut(s) 244
BssNAI GTATAC 1 cut(s) 742
BssT1I CCWWGG 1 cut(s) 244
Bst1107I GTATAC 1 cut(s) 742
Bst2UI CCWGG 1 cut(s) 563
Bst4CI ACNGT 4 cut(s) 99, 739, 938, 1198
Bst6I CTCTTC 2 cut(s) 207, 1323
BstAPI GCANNNNNTGC 1 cut(s) 580
BstBAI YACGTR 2 cut(s) 429, 587
BstC8I GCNNGC 2 cut(s) 69, 846
BstDEI CTNAG 5 cut(s) 662, 944, 1215, 1343, 1538
BstF5I GGATG 3 cut(s) 80, 1062, 1470
BstFNI CGCG 1 cut(s) 1268
BstMAI GTCTC 2 cut(s) 633, 1065
BstMWI GCNNNNNNNGC 4 cut(s) 64, 77, 580, 1121
BstNI CCWGG 1 cut(s) 563
BstSCI CCNGG 2 cut(s) 561, 1149
BstSFI CTRYAG 2 cut(s) 314, 1413
BstSLI GKGCMC 1 cut(s) 483
BstUI CGCG 1 cut(s) 1268
BstV1I GCAGC 4 cut(s) 45, 209, 419, 1475
BstX2I RGATCY 2 cut(s) 547, 558
BstYI RGATCY 2 cut(s) 547, 558
BstZ17I GTATAC 1 cut(s) 742
Bsu15I ATCGAT 2 cut(s) 1011, 1165
BsuRI GGCC 6 cut(s) 566, 765, 1124, 1149, 1296, 1486
BsuTUI ATCGAT 2 cut(s) 1011, 1165
BtgZI GCGATG 1 cut(s) 22
BtrI CACGTC 1 cut(s) 1075
BtsCI GGATG 3 cut(s) 80, 1062, 1470
BtsI GCAGTG 2 cut(s) 48, 835
BtsIMutI CAGTG 3 cut(s) 48, 835, 1311
BtuMI TCGCGA 1 cut(s) 1268
Cac8I GCNNGC 2 cut(s) 69, 846
CaiI CAGNNNCTG 1 cut(s) 551
CciI TCATGA 1 cut(s) 145
Cfr13I GGNCC 1 cut(s) 1148
ClaI ATCGAT 2 cut(s) 1011, 1165
CseI GACGC 1 cut(s) 896
Csp6I GTAC 2 cut(s) 656, 939
CviAII CATG 7 cut(s) 140, 146, 599, 968, 1022, 1108, 1492
CviQI GTAC 2 cut(s) 656, 939
DdeI CTNAG 5 cut(s) 662, 944, 1215, 1343, 1538
DriI GACNNNNNGTC 2 cut(s) 1078, 1296
EaeI YGGCCR 4 cut(s) 564, 763, 1122, 1294
Eam1104I CTCTTC 2 cut(s) 207, 1323
Eam1105I GACNNNNNGTC 2 cut(s) 1078, 1296
EarI CTCTTC 2 cut(s) 207, 1323
Eco130I CCWWGG 1 cut(s) 244
Eco57I CTGAAG 1 cut(s) 528
Eco72I CACGTG 1 cut(s) 429
EcoRI GAATTC 2 cut(s) 169, 821
EcoRII CCWGG 1 cut(s) 561
EcoT14I CCWWGG 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 244
Esp3I CGTCTC 1 cut(s) 1065
FaeI CATG 7 cut(s) 143, 149, 602, 971, 1025, 1111, 1495
FalI AAGNNNNNCTT 4 cut(s) 228, 260, 785, 817
FatI CATG 7 cut(s) 139, 145, 598, 967, 1021, 1107, 1491
FauI CCCGC 1 cut(s) 1326
FbaI TGATCA 2 cut(s) 115, 856
FblI GTMKAC 1 cut(s) 741
Fnu4HI GCNGC 5 cut(s) 59, 198, 408, 605, 1464
FokI GGATG 3 cut(s) 67, 1049, 1457
Fsp4HI GCNGC 5 cut(s) 59, 198, 408, 605, 1464
FspBI CTAG 5 cut(s) 278, 609, 615, 881, 980
GluI GCNGC 5 cut(s) 59, 198, 408, 605, 1464
HaeIII GGCC 6 cut(s) 566, 765, 1124, 1149, 1296, 1486
HapII CCGG 2 cut(s) 1151, 1487
HgaI GACGC 1 cut(s) 896
Hin1II CATG 7 cut(s) 143, 149, 602, 971, 1025, 1111, 1495
HinfI GANTC 4 cut(s) 323, 515, 670, 865
HpaII CCGG 2 cut(s) 1151, 1487
HphI GGTGA 2 cut(s) 731, 1231
Hpy166II GTNNAC 6 cut(s) 481, 593, 742, 1156, 1258, 1518
Hpy188I TCNGA 9 cut(s) 207, 268, 547, 675, 864, 1051, 1346, 1431, 1475
Hpy188III TCNNGA 8 cut(s) 146, 551, 956, 1070, 1208, 1267, 1357, 1549
Hpy8I GTNNAC 6 cut(s) 481, 593, 742, 1156, 1258, 1518
Hpy99I CGWCG 2 cut(s) 391, 1302
HpyAV CCTTC 7 cut(s) 230, 313, 716, 787, 890, 1364, 1450
HpyCH4III ACNGT 4 cut(s) 99, 739, 938, 1198
HpyCH4IV ACGT 5 cut(s) 380, 428, 586, 784, 1074
HpyF10VI GCNNNNNNNGC 4 cut(s) 64, 77, 580, 1121
HpyF3I CTNAG 5 cut(s) 662, 944, 1215, 1343, 1538
HpySE526I ACGT 5 cut(s) 380, 428, 586, 784, 1074
Hsp92II CATG 7 cut(s) 143, 149, 602, 971, 1025, 1111, 1495
Ksp22I TGATCA 2 cut(s) 115, 856
LguI GCTCTTC 2 cut(s) 207, 1323
LmnI GCTCC 1 cut(s) 499
Lsp1109I GCAGC 4 cut(s) 45, 209, 419, 1475
LweI GCATC 4 cut(s) 45, 89, 583, 1408
MaeI CTAG 5 cut(s) 278, 609, 615, 881, 980
MaeII ACGT 5 cut(s) 380, 428, 586, 784, 1074
MaeIII GTNAC 3 cut(s) 251, 685, 1336
MbiI CCGCTC 1 cut(s) 1333
MboII GAAGA 6 cut(s) 194, 534, 1028, 1085, 1340, 1372
MfeI CAATTG 1 cut(s) 62
MflI RGATCY 2 cut(s) 547, 558
MhlI GDGCHC 1 cut(s) 483
MlsI TGGCCA 2 cut(s) 566, 765
MluNI TGGCCA 2 cut(s) 566, 765
MlyI GAGTC 1 cut(s) 332
MmeI TCCRAC 1 cut(s) 1110
MnlI CCTC 8 cut(s) 288, 297, 349, 719, 1093, 1399, 1417, 1547
Mox20I TGGCCA 2 cut(s) 566, 765
MroXI GAANNNNTTC 1 cut(s) 1439
MscI TGGCCA 2 cut(s) 566, 765
MseI TTAA 2 cut(s) 47, 459
MslI CAYNNNNRTG 3 cut(s) 41, 144, 1345
Msp20I TGGCCA 2 cut(s) 566, 765
MspI CCGG 2 cut(s) 1151, 1487
MspR9I CCNGG 2 cut(s) 563, 1151
MunI CAATTG 1 cut(s) 62
MvaI CCWGG 1 cut(s) 563
MvnI CGCG 1 cut(s) 1268
MwoI GCNNNNNNNGC 4 cut(s) 64, 77, 580, 1121
NciI CCSGG 1 cut(s) 1151
NlaIII CATG 7 cut(s) 143, 149, 602, 971, 1025, 1111, 1495
NlaIV GGNNCC 1 cut(s) 501
NruI TCGCGA 1 cut(s) 1268
PagI TCATGA 1 cut(s) 145
PciSI GCTCTTC 2 cut(s) 207, 1323
PcsI WCGNNNNNNNCGW 2 cut(s) 386, 583
PdmI GAANNNNTTC 1 cut(s) 1439
PfeI GAWTC 3 cut(s) 515, 670, 865
PkrI GCNGC 5 cut(s) 60, 199, 409, 606, 1465
PleI GAGTC 1 cut(s) 331
PmaCI CACGTG 1 cut(s) 429
PmlI CACGTG 1 cut(s) 429
PpsI GAGTC 1 cut(s) 331
Ppu21I YACGTR 2 cut(s) 429, 587
Psp6I CCWGG 1 cut(s) 561
PspCI CACGTG 1 cut(s) 429
PspGI CCWGG 1 cut(s) 561
PspN4I GGNNCC 1 cut(s) 501
PspPI GGNCC 1 cut(s) 1148
PstI CTGCAG 1 cut(s) 318
PstNI CAGNNNCTG 1 cut(s) 551
PsuI RGATCY 2 cut(s) 547, 558
RruI TCGCGA 1 cut(s) 1268
RsaI GTAC 2 cut(s) 657, 940
RsaNI GTAC 2 cut(s) 656, 939
RseI CAYNNNNRTG 3 cut(s) 41, 144, 1345
SapI GCTCTTC 2 cut(s) 207, 1323
SaqAI TTAA 2 cut(s) 47, 459
SatI GCNGC 5 cut(s) 59, 198, 408, 605, 1464
Sau96I GGNCC 1 cut(s) 1148
SchI GAGTC 1 cut(s) 332
ScrFI CCNGG 2 cut(s) 563, 1151
SduI GDGCHC 1 cut(s) 483
SfaNI GCATC 4 cut(s) 45, 89, 583, 1408
SfcI CTRYAG 2 cut(s) 314, 1413
SmiMI CAYNNNNRTG 3 cut(s) 41, 144, 1345
SmlI CTYRAG 1 cut(s) 292
SmoI CTYRAG 1 cut(s) 292
SpeI ACTAGT 1 cut(s) 277
SsiI CCGC 4 cut(s) 572, 605, 1333, 1499
SspMI CTAG 5 cut(s) 278, 609, 615, 881, 980
StyD4I CCNGG 2 cut(s) 561, 1149
StyI CCWWGG 1 cut(s) 244
TaaI ACNGT 4 cut(s) 99, 739, 938, 1198
TaiI ACGT 5 cut(s) 383, 431, 589, 787, 1077
TaqI TCGA 5 cut(s) 345, 1011, 1069, 1165, 1443
TatI WGTACW 1 cut(s) 655
TauI GCSGC 1 cut(s) 607
TfiI GAWTC 3 cut(s) 515, 670, 865
Tru1I TTAA 2 cut(s) 47, 459
Tru9I TTAA 2 cut(s) 47, 459
TscAI CASTG 3 cut(s) 48, 835, 1311
TseI GCWGC 4 cut(s) 58, 197, 407, 1463
TspDTI ATGAA 7 cut(s) 162, 909, 1238, 1379, 1383, 1448, 1508
TspGWI ACGGA 2 cut(s) 527, 935
TspRI CASTG 3 cut(s) 48, 835, 1311
VneI GTGCAC 1 cut(s) 479
XapI RAATTY 5 cut(s) 169, 505, 808, 821, 1284
XmiI GTMKAC 1 cut(s) 741
XmnI GAANNNNTTC 1 cut(s) 1439
XspI CTAG 5 cut(s) 278, 609, 615, 881, 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.