MD02G1022200.v1.1

Calmodulin-binding receptor-like cytoplasmic kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
1548373 .. 1552372
4000 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1022200.v1.1.491

Sequence Viewer

Length: 1587 bp
ATGGGAGTTGGGCAGATTACCCCGTTTAGAATGGGCATCGCAGTGTTAAGTCTGTTGCTGCAATTGCCAGCAATCTTTGCATCCGAGTTTGTCATACAGTCAAAGGATTGTAGTGATCACATTGCCTATTCAAGCTCTCATGGTCATGAATTGTTTTACATAAACGGGAATTCAGTAGAGAAAACTATATTCTGCACAGCTCTTCGGACATACTATGCAAATGGTTGCATTTTAGAAGGCAACCTTGGAAGTTACCATTGTCTATCAGACCCTTCACTAGTTGATTTTACCTTGAGGACCGGGAGGAAACTTCTGCAGAAGGAGTCAAAGGATAAATCCACTTTCGACAACAGAGAGGAAAAAAATGATTTTGCTTCTATGTCTACAACGACAAGGGTTGGAATAGCAGCAAGTGGAATGTTTCTCACGTGTTGTGCTTTTCTATGTCCTTGCTTTTTTAAGAAAAGGAGAGATAGCGTGCACGGAGTTCTTGCAAGGGAGCCAAATTCAATGGATTCAGGTTTTTCTTTTGAGGTGAGTTCTTCAGATCCTGAAAAGATCCTGGCCAGTCCGCATCGTGTGCCCCCTAGTCCACATCATGTGCCCCCTAGTCCACATCGTGTGCCACCTAGTCCTAGATTTTCAATGTCTCCAAAGCCCGGTAAAATTGGATCAGTACATCTCAGTTTGAATCAGATTGCAAAAGTAACTCGCAACTTCTCTCAATCGCAACAAGTAGGTGAAGGAGGTTTTGGAACTGTGTACAAGGCTCGGTTAGATGATGGCCAAGTGGTTTCTATTAAACGTGCAAAGAAGGAACACTTTGAGAATTTGCAAACTGAATTCGGCAGTGAAGTTGAACTGCTTGCCAAAATTGATCATAGGAATCTTGTAAAGCTACTAGGTTATGTTGATGAAGGAAATGAGCGTCTTATCATTACAGAGTATGTGGCGAATGGTACTCTTAGAGAACATCTGGATTGTCTGCATGGGAAAATCCTAGAGTTCAACCAGCGACTTGAAATTGCTATCGATGTTGCTCATGCCCTTACCTATCTTCACACATATTCTGAAAAACAAATCATCCATCGAGATGTGAAGTCCTCCAACATTCTTCTCACAGAAAGCATGAGAGCCAAAGTGGCAGATTTTGGATTTGCAAGGCTTGGCCCGGTGGACACAGATCAAACACACATTTCAACCAAAGTGAAAGGAACTGTCGGTTATCTTGACCCTGAGTATATGAAAACCTATCAACTCACCCCGAAAAGTGATGTTTACTCGTTCGGGATCTTACTAATAGAAATTTTGACTGGCCGTCGTCCAGTGGAGTTGAAGAGACCTGTTGAAGAGCGGGTAACACTCAGATGGGCCTTCAAGAAGTTGAATGAAGGGAAGGTGGTGGAATTGGCTGATCCTTTTATGGAGGAAACTATAGATGCAGAGGTTCTGATGAAAATCTTTGATCTGGCGATCCAATGTGCAGCCCCCATCCGAGTTGATAGACCGGACATGAAATCGGTGGGAGAGCAGTTGTGGACAATAAGGGCGGACTACCTTAGAAGTGTCAAGGCAAGGGCACAGTAA

Protein Analysis

529

Amino Acids

59.2

Weight (kDa)

8.21

Isoelectric Point (pI)

42.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 241 - 447 3.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 242 - 512 4.9e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1354
AccI GTMKAC 1 cut(s) 383
AciI CCGC 3 cut(s) 572, 1354, 1550
AclWI GGATC 6 cut(s) 542, 553, 679, 1298, 1409, 1468
AcoI YGGCCR 3 cut(s) 564, 784, 1315
AcsI RAATTY 5 cut(s) 169, 505, 829, 842, 1305
AcuI CTGAAG 1 cut(s) 528
AcvI CACGTG 1 cut(s) 429
AdeI CACNNNGTG 1 cut(s) 620
AfaI GTAC 3 cut(s) 678, 764, 961
AfiI CCNNNNNNNGG 1 cut(s) 659
AflIII ACRYGT 1 cut(s) 428
AhdI GACNNNNNGTC 1 cut(s) 1317
AhlI ACTAGT 1 cut(s) 277
AjnI CCWGG 1 cut(s) 561
AjuI GAANNNNNNNTTGG 4 cut(s) 228, 260, 735, 767
AluBI AGCT 3 cut(s) 135, 200, 898
AluI AGCT 3 cut(s) 135, 200, 898
Alw21I GWGCWC 1 cut(s) 483
Alw26I GTCTC 2 cut(s) 654, 1333
Alw44I GTGCAC 1 cut(s) 479
AlwI GGATC 6 cut(s) 542, 553, 679, 1298, 1409, 1468
AlwNI CAGNNNCTG 1 cut(s) 551
AoxI GGCC 5 cut(s) 564, 784, 1168, 1315, 1371
ApaLI GTGCAC 1 cut(s) 479
ApeKI GCWGC 3 cut(s) 58, 407, 1484
ApoI RAATTY 5 cut(s) 169, 505, 829, 842, 1305
AspS9I GGNCC 3 cut(s) 297, 1169, 1371
AsuC2I CCSGG 3 cut(s) 301, 660, 1172
AsuHPI GGTGA 3 cut(s) 547, 752, 1252
AvaII GGWCC 1 cut(s) 297
BaeGI GKGCMC 4 cut(s) 483, 585, 606, 1582
BalI TGGCCA 2 cut(s) 566, 786
BbrPI CACGTG 1 cut(s) 429
Bbv12I GWGCWC 1 cut(s) 483
BbvI GCAGC 3 cut(s) 45, 419, 1496
BccI CCATC 4 cut(s) 776, 1095, 1362, 1499
BceAI ACGGC 1 cut(s) 1302
BciT130I CCWGG 1 cut(s) 563
BclI TGATCA 2 cut(s) 115, 877
BcnI CCSGG 3 cut(s) 301, 660, 1172
BcoDI GTCTC 2 cut(s) 654, 1333
BcuI ACTAGT 1 cut(s) 277
BfaI CTAG 7 cut(s) 278, 588, 609, 630, 636, 902, 1001
BfmI CTRYAG 2 cut(s) 314, 1434
BglI GCCNNNNNGGC 1 cut(s) 1142
BisI GCNGC 3 cut(s) 59, 408, 1485
BlsI GCNGC 3 cut(s) 60, 409, 1486
Bme1390I CCNGG 4 cut(s) 301, 563, 660, 1172
Bme18I GGWCC 1 cut(s) 297
BmeRI GACNNNNNGTC 1 cut(s) 1317
BmgT120I GGNCC 3 cut(s) 297, 1169, 1371
BmiI GGNNCC 1 cut(s) 501
BmrFI CCNGG 4 cut(s) 301, 563, 660, 1172
BmsI GCATC 4 cut(s) 45, 89, 583, 1429
BpuEI CTTGAG 1 cut(s) 313
BpuMI CCSGG 3 cut(s) 301, 660, 1172
Bsa29I ATCGAT 1 cut(s) 1032
BsaAI YACGTR 1 cut(s) 429
BsaBI GATNNNNATC 1 cut(s) 1457
BsaI GGTCTC 1 cut(s) 1333
BsaJI CCNNGG 1 cut(s) 244
BsaWI WCCGGW 1 cut(s) 1507
Bsc4I CCNNNNNNNGG 1 cut(s) 659
Bse1I ACTGG 3 cut(s) 567, 1318, 1325
Bse3DI GCAATG 1 cut(s) 120
Bse8I GATNNNNATC 1 cut(s) 1457
BseBI CCWGG 1 cut(s) 563
BseCI ATCGAT 1 cut(s) 1032
BseDI CCNNGG 1 cut(s) 244
BseGI GGATG 3 cut(s) 80, 1083, 1491
BseJI GATNNNNATC 1 cut(s) 1457
BseLI CCNNNNNNNGG 1 cut(s) 659
BseMI GCAATG 1 cut(s) 120
BseMII CTCAG 3 cut(s) 697, 1227, 1378
BseNI ACTGG 3 cut(s) 567, 1318, 1325
BseSI GKGCMC 4 cut(s) 483, 585, 606, 1582
BseXI GCAGC 3 cut(s) 45, 419, 1496
BsgI GTGCAG 2 cut(s) 178, 1503
BshFI GGCC 5 cut(s) 566, 786, 1170, 1317, 1373
BshVI ATCGAT 1 cut(s) 1032
BsiHKAI GWGCWC 1 cut(s) 483
BsiSI CCGG 4 cut(s) 300, 660, 1172, 1508
BslI CCNNNNNNNGG 1 cut(s) 659
BsmAI GTCTC 2 cut(s) 654, 1333
BsnI GGCC 5 cut(s) 566, 786, 1170, 1317, 1373
Bso31I GGTCTC 1 cut(s) 1333
Bsp1286I GDGCHC 4 cut(s) 483, 585, 606, 1582
Bsp1407I TGTACA 1 cut(s) 762
BspACI CCGC 3 cut(s) 572, 1354, 1550
BspANI GGCC 5 cut(s) 566, 786, 1170, 1317, 1373
BspCNI CTCAG 3 cut(s) 696, 1228, 1377
BspDI ATCGAT 1 cut(s) 1032
BspHI TCATGA 1 cut(s) 145
BspLI GGNNCC 1 cut(s) 501
BspMAI CTGCAG 1 cut(s) 318
BspPI GGATC 6 cut(s) 542, 553, 679, 1298, 1409, 1468
BspQI GCTCTTC 2 cut(s) 207, 1344
BspTNI GGTCTC 1 cut(s) 1333
BsrBI CCGCTC 1 cut(s) 1354
BsrDI GCAATG 1 cut(s) 120
BsrGI TGTACA 1 cut(s) 762
BsrI ACTGG 3 cut(s) 567, 1318, 1325
BssECI CCNNGG 1 cut(s) 244
BssT1I CCWWGG 1 cut(s) 244
Bst2UI CCWGG 1 cut(s) 563
Bst4CI ACNGT 4 cut(s) 99, 760, 1219, 1584
Bst6I CTCTTC 3 cut(s) 207, 1331, 1344
BstAPI GCANNNNNTGC 2 cut(s) 77, 580
BstAUI TGTACA 1 cut(s) 762
BstBAI YACGTR 1 cut(s) 429
BstC8I GCNNGC 3 cut(s) 69, 479, 867
BstDEI CTNAG 5 cut(s) 683, 965, 1236, 1364, 1559
BstF5I GGATG 3 cut(s) 80, 1083, 1491
BstMAI GTCTC 2 cut(s) 654, 1333
BstMWI GCNNNNNNNGC 4 cut(s) 64, 77, 580, 1142
BstNI CCWGG 1 cut(s) 563
BstSCI CCNGG 4 cut(s) 299, 561, 658, 1170
BstSFI CTRYAG 2 cut(s) 314, 1434
BstSLI GKGCMC 4 cut(s) 483, 585, 606, 1582
BstV1I GCAGC 3 cut(s) 45, 419, 1496
BstX2I RGATCY 3 cut(s) 547, 558, 1290
BstYI RGATCY 3 cut(s) 547, 558, 1290
Bsu15I ATCGAT 1 cut(s) 1032
BsuRI GGCC 5 cut(s) 566, 786, 1170, 1317, 1373
BsuTUI ATCGAT 1 cut(s) 1032
BtgZI GCGATG 1 cut(s) 22
BtsCI GGATG 3 cut(s) 80, 1083, 1491
BtsI GCAGTG 2 cut(s) 48, 856
BtsIMutI CAGTG 3 cut(s) 48, 856, 1332
Cac8I GCNNGC 3 cut(s) 69, 479, 867
CaiI CAGNNNCTG 1 cut(s) 551
CciI TCATGA 1 cut(s) 145
Cfr13I GGNCC 3 cut(s) 297, 1169, 1371
ClaI ATCGAT 1 cut(s) 1032
CseI GACGC 1 cut(s) 917
Csp6I GTAC 3 cut(s) 677, 763, 960
CviAII CATG 7 cut(s) 140, 146, 599, 989, 1043, 1129, 1513
CviQI GTAC 3 cut(s) 677, 763, 960
DdeI CTNAG 5 cut(s) 683, 965, 1236, 1364, 1559
DraIII CACNNNGTG 1 cut(s) 620
DriI GACNNNNNGTC 1 cut(s) 1317
EaeI YGGCCR 3 cut(s) 564, 784, 1315
Eam1104I CTCTTC 3 cut(s) 207, 1331, 1344
Eam1105I GACNNNNNGTC 1 cut(s) 1317
EarI CTCTTC 3 cut(s) 207, 1331, 1344
EciI GGCGGA 1 cut(s) 1565
Eco130I CCWWGG 1 cut(s) 244
Eco31I GGTCTC 1 cut(s) 1333
Eco47I GGWCC 1 cut(s) 297
Eco57I CTGAAG 1 cut(s) 528
Eco72I CACGTG 1 cut(s) 429
EcoRI GAATTC 2 cut(s) 169, 842
EcoRII CCWGG 1 cut(s) 561
EcoT14I CCWWGG 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 244
FaeI CATG 7 cut(s) 143, 149, 602, 992, 1046, 1132, 1516
FalI AAGNNNNNCTT 4 cut(s) 228, 260, 806, 838
FatI CATG 7 cut(s) 139, 145, 598, 988, 1042, 1128, 1512
FauI CCCGC 1 cut(s) 1347
FbaI TGATCA 2 cut(s) 115, 877
FblI GTMKAC 1 cut(s) 383
Fnu4HI GCNGC 3 cut(s) 59, 408, 1485
FokI GGATG 3 cut(s) 67, 1070, 1478
Fsp4HI GCNGC 3 cut(s) 59, 408, 1485
FspBI CTAG 7 cut(s) 278, 588, 609, 630, 636, 902, 1001
GluI GCNGC 3 cut(s) 59, 408, 1485
HaeIII GGCC 5 cut(s) 566, 786, 1170, 1317, 1373
HapII CCGG 4 cut(s) 300, 660, 1172, 1508
HgaI GACGC 1 cut(s) 917
Hin1II CATG 7 cut(s) 143, 149, 602, 992, 1046, 1132, 1516
HinfI GANTC 4 cut(s) 323, 515, 691, 886
HpaII CCGG 4 cut(s) 300, 660, 1172, 1508
HphI GGTGA 3 cut(s) 547, 752, 1252
Hpy166II GTNNAC 8 cut(s) 384, 481, 593, 614, 763, 1177, 1279, 1539
Hpy188I TCNGA 9 cut(s) 85, 207, 268, 547, 696, 1072, 1367, 1452, 1496
Hpy188III TCNNGA 7 cut(s) 146, 551, 977, 1091, 1229, 1288, 1378
Hpy8I GTNNAC 8 cut(s) 384, 481, 593, 614, 763, 1177, 1279, 1539
Hpy99I CGWCG 1 cut(s) 1323
HpyAV CCTTC 9 cut(s) 230, 282, 313, 737, 808, 911, 1384, 1385, 1390
HpyCH4III ACNGT 4 cut(s) 99, 760, 1219, 1584
HpyCH4IV ACGT 2 cut(s) 428, 805
HpyF10VI GCNNNNNNNGC 4 cut(s) 64, 77, 580, 1142
HpyF3I CTNAG 5 cut(s) 683, 965, 1236, 1364, 1559
HpySE526I ACGT 2 cut(s) 428, 805
Hsp92II CATG 7 cut(s) 143, 149, 602, 992, 1046, 1132, 1516
Ksp22I TGATCA 2 cut(s) 115, 877
LguI GCTCTTC 2 cut(s) 207, 1344
LmnI GCTCC 1 cut(s) 499
Lsp1109I GCAGC 3 cut(s) 45, 419, 1496
LweI GCATC 4 cut(s) 45, 89, 583, 1429
MaeI CTAG 7 cut(s) 278, 588, 609, 630, 636, 902, 1001
MaeII ACGT 2 cut(s) 428, 805
MaeIII GTNAC 3 cut(s) 251, 706, 1357
MbiI CCGCTC 1 cut(s) 1354
MboII GAAGA 6 cut(s) 194, 534, 1049, 1106, 1348, 1361
MfeI CAATTG 1 cut(s) 62
MflI RGATCY 3 cut(s) 547, 558, 1290
MhlI GDGCHC 4 cut(s) 483, 585, 606, 1582
MlsI TGGCCA 2 cut(s) 566, 786
MluNI TGGCCA 2 cut(s) 566, 786
MlyI GAGTC 1 cut(s) 332
MmeI TCCRAC 2 cut(s) 379, 1131
MnlI CCTC 8 cut(s) 288, 297, 349, 526, 740, 1114, 1420, 1438
Mox20I TGGCCA 2 cut(s) 566, 786
MscI TGGCCA 2 cut(s) 566, 786
MseI TTAA 3 cut(s) 47, 459, 801
MslI CAYNNNNRTG 4 cut(s) 41, 144, 1092, 1366
Msp20I TGGCCA 2 cut(s) 566, 786
MspI CCGG 4 cut(s) 300, 660, 1172, 1508
MspR9I CCNGG 4 cut(s) 301, 563, 660, 1172
MunI CAATTG 1 cut(s) 62
MvaI CCWGG 1 cut(s) 563
MwoI GCNNNNNNNGC 4 cut(s) 64, 77, 580, 1142
NciI CCSGG 3 cut(s) 301, 660, 1172
NlaIII CATG 7 cut(s) 143, 149, 602, 992, 1046, 1132, 1516
NlaIV GGNNCC 1 cut(s) 501
PagI TCATGA 1 cut(s) 145
PciSI GCTCTTC 2 cut(s) 207, 1344
PfeI GAWTC 3 cut(s) 515, 691, 886
PkrI GCNGC 3 cut(s) 60, 409, 1486
PleI GAGTC 1 cut(s) 331
PmaCI CACGTG 1 cut(s) 429
PmlI CACGTG 1 cut(s) 429
PpsI GAGTC 1 cut(s) 331
Ppu21I YACGTR 1 cut(s) 429
Psp6I CCWGG 1 cut(s) 561
PspCI CACGTG 1 cut(s) 429
PspGI CCWGG 1 cut(s) 561
PspN4I GGNNCC 1 cut(s) 501
PspPI GGNCC 3 cut(s) 297, 1169, 1371
PstI CTGCAG 1 cut(s) 318
PstNI CAGNNNCTG 1 cut(s) 551
PsuI RGATCY 3 cut(s) 547, 558, 1290
RsaI GTAC 3 cut(s) 678, 764, 961
RsaNI GTAC 3 cut(s) 677, 763, 960
RseI CAYNNNNRTG 4 cut(s) 41, 144, 1092, 1366
SapI GCTCTTC 2 cut(s) 207, 1344
SaqAI TTAA 3 cut(s) 47, 459, 801
SatI GCNGC 3 cut(s) 59, 408, 1485
Sau96I GGNCC 3 cut(s) 297, 1169, 1371
SchI GAGTC 1 cut(s) 332
ScrFI CCNGG 4 cut(s) 301, 563, 660, 1172
SduI GDGCHC 4 cut(s) 483, 585, 606, 1582
SfaNI GCATC 4 cut(s) 45, 89, 583, 1429
SfcI CTRYAG 2 cut(s) 314, 1434
SinI GGWCC 1 cut(s) 297
SmiMI CAYNNNNRTG 4 cut(s) 41, 144, 1092, 1366
SmlI CTYRAG 1 cut(s) 292
SmoI CTYRAG 1 cut(s) 292
SpeI ACTAGT 1 cut(s) 277
SsiI CCGC 3 cut(s) 572, 1354, 1550
SspMI CTAG 7 cut(s) 278, 588, 609, 630, 636, 902, 1001
StyD4I CCNGG 4 cut(s) 299, 561, 658, 1170
StyI CCWWGG 1 cut(s) 244
TaaI ACNGT 4 cut(s) 99, 760, 1219, 1584
TaiI ACGT 2 cut(s) 431, 808
TaqI TCGA 3 cut(s) 345, 1032, 1090
TatI WGTACW 2 cut(s) 676, 762
TfiI GAWTC 3 cut(s) 515, 691, 886
Tru1I TTAA 3 cut(s) 47, 459, 801
Tru9I TTAA 3 cut(s) 47, 459, 801
TscAI CASTG 3 cut(s) 48, 856, 1332
TseI GCWGC 3 cut(s) 58, 407, 1484
TspDTI ATGAA 6 cut(s) 162, 930, 1259, 1404, 1469, 1529
TspGWI ACGGA 1 cut(s) 498
TspRI CASTG 3 cut(s) 48, 856, 1332
VneI GTGCAC 1 cut(s) 479
VpaK11BI GGWCC 1 cut(s) 297
XapI RAATTY 5 cut(s) 169, 505, 829, 842, 1305
XmiI GTMKAC 1 cut(s) 383
XspI CTAG 7 cut(s) 278, 588, 609, 630, 636, 902, 1001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.