RLG00000015869

Calmodulin-binding receptor-like cytoplasmic kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
1995341 .. 1997894
2554 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015869

Sequence Viewer

Length: 1524 bp
ATGGAAATTGTGCATATTATTCCGTTAAGAATGGCAATAACTATGTTAAGTATGTTGATGTTGGTACAATTGCCAGCAATCCCTGCCTCTGCGTTTGTCATACAGTCAAAGCTTTGTAAGGACCAGTTTGCCTATGCGACTTCTAATGGTAAGGACTTGTTTTACATAAATGGGAATTCAGTGGAGAAAGCTTTATTCTGTAATGCTCTTCAAACATACTATGCAAATGGTTGCATTTTGGAGGGGTGCCTCGGAAGCAGCCATTGTGGATCAGTCATTTCACTAGGAAGAAAACTTATGCAAAAGGAGTTGAAGGATGAATCCACTTCCCATCATGGAGAAAACAAGAACGCTTCTGAATCTATGTCCATTACCAAAACAGTTGGAATAGCAGCAAGTGGAGCGTTATTGGTGTGTTGTGTTTTCCTTTGTCCCTGCTTTTTTAAGAAAAGGACAGAAGCTGCTCACAATGTTCTTGCTAAGGACGCAAATTCAATGGATAATTCAGCTTCTTCTTTTGAAGTGAATCATGCCGCTGAAAAGATACCGGCCAGTCCACATCGTGTTCCACCTAGTCCTAGATATTCAAACTCTCCAAAACTCAGTAGACTTGGGTCTGTACATCTCAATTTGAATCAGATTGCCAGGGCAACCCGCAACTTCTCAAAATCACAACTCATAGGTGAAGGTGGTTTTGGAACTGTCTACAAAGCTCGGCTAGCTGATGGCCAAGTGGTTTCTATAAAACGTGCAAAGAAGGAACTCTTTGAGAATTTGCAAACCGAATTCAGTACAGAAGTTGAACTTCTGGCCAAAATTGATCATCGGAATCTTGTAAAGCTACTAGGTTATGTGGATGAAGGAAATGAACGACTTATCATTACAGAGTATGTGCCGAATGGTAATCTCAGAGAACATCTGGATGGTCAACATGGGAAAACCCTGGAGTTTAATCAGCGACTTGAAATAGCTATTGATGTTGCTCATGCCCTAACTTATCTTCATCTGTACACAGAAAAGCAAATTATCCATCGAGACGTGAAGTCATCCAACATTCTTCTGACAGAAAGCATGCGAGCCAAAGTTGCTGATTTTGGATTTGCCAGGCTTGGTCCGATGGATGCAGATCGAACACACATTTCTACTAAAGTGAAAGGAACTGTTGGCTACCTAGACCCGGAGTACATGAAAACATATCAACTCACTGCCAAAAGTGATGTCTACTCATTTGGGATATTACTTATAGAAATTGTGACGGGTCGTCGTCCAGTGGAGATGAAGAGACCAGTTGAAGAGCGTGTCACTCTCAGATGGGCATTCAAAAAGTTGAACGAAGGAAGAACGTGGGAATTGATTGATCCTGCAATAGAGGAAGCTGTAAATGCAGACGTACTACAGAAAATCTTTGATTTGGCTATCCAGTGTGCAGCTCCAATTCGAGCTGATCGGCCAGACATGAAAACAGTGGGGGAGCAGCTGTGGACAATAAGGGCAGACTACCTTAAAAGTCTCAAAAGAGGGTAG

Protein Analysis

508

Amino Acids

56.53

Weight (kDa)

8.81

Isoelectric Point (pI)

34.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 222 - 491 2.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 224 - 493 1.1e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 246
AccI GTMKAC 3 cut(s) 607, 705, 1221
AciI CCGC 2 cut(s) 534, 655
AclWI GGATC 2 cut(s) 277, 1352
AcoI YGGCCR 4 cut(s) 549, 727, 810, 1448
AcsI RAATTY 4 cut(s) 175, 490, 772, 785
AdeI CACNNNGTG 1 cut(s) 563
AfaI GTAC 6 cut(s) 66, 621, 793, 1010, 1184, 1392
AfiI CCNNNNNNNGG 1 cut(s) 1177
AhdI GACNNNNNGTC 2 cut(s) 1042, 1260
AjiI CACGTC 1 cut(s) 1039
AjnI CCWGG 3 cut(s) 644, 942, 1103
AjuI GAANNNNNNNTTGG 2 cut(s) 678, 710
Alw26I GTCTC 3 cut(s) 1029, 1276, 1514
AlwI GGATC 2 cut(s) 277, 1352
AlwNI CAGNNNCTG 1 cut(s) 461
AoxI GGCC 4 cut(s) 549, 727, 810, 1448
ApeKI GCWGC 5 cut(s) 258, 392, 461, 1427, 1474
ApoI RAATTY 4 cut(s) 175, 490, 772, 785
ArsI GACNNNNNNTTYG 2 cut(s) 1203, 1235
AspS9I GGNCC 2 cut(s) 121, 1112
AsuC2I CCSGG 1 cut(s) 1178
AsuHPI GGTGA 1 cut(s) 695
AsuNHI GCTAGC 1 cut(s) 718
AvaII GGWCC 2 cut(s) 121, 1112
BalI TGGCCA 2 cut(s) 729, 812
BanI GGYRCC 1 cut(s) 246
BbvI GCAGC 5 cut(s) 270, 404, 448, 1439, 1486
BccI CCATC 6 cut(s) 339, 719, 917, 1038, 1111, 1305
BciT130I CCWGG 3 cut(s) 646, 944, 1105
BclI TGATCA 1 cut(s) 820
BcnI CCSGG 1 cut(s) 1178
BcoDI GTCTC 3 cut(s) 1029, 1276, 1514
BfaI CTAG 6 cut(s) 284, 573, 579, 719, 845, 1172
BfmI CTRYAG 1 cut(s) 1394
BisI GCNGC 6 cut(s) 259, 393, 462, 534, 1428, 1475
BlsI GCNGC 6 cut(s) 260, 394, 463, 535, 1429, 1476
Bme1390I CCNGG 4 cut(s) 646, 944, 1105, 1178
Bme18I GGWCC 2 cut(s) 121, 1112
BmeRI GACNNNNNGTC 2 cut(s) 1042, 1260
BmgBI CACGTC 1 cut(s) 1039
BmgT120I GGNCC 2 cut(s) 121, 1112
BmiI GGNNCC 1 cut(s) 248
BmrFI CCNGG 4 cut(s) 646, 944, 1105, 1178
BmsI GCATC 1 cut(s) 1111
BmtI GCTAGC 1 cut(s) 722
BoxI GACNNNNGTC 1 cut(s) 613
BpmI CTGGAG 1 cut(s) 965
Bpu10I CCTNAGC 1 cut(s) 480
BpuMI CCSGG 1 cut(s) 1178
BsaBI GATNNNNATC 1 cut(s) 1125
BsaI GGTCTC 1 cut(s) 1276
BsaJI CCNNGG 3 cut(s) 250, 645, 942
BsaXI ACNNNNNCTCC 2 cut(s) 1463, 1493
Bsc4I CCNNNNNNNGG 1 cut(s) 1177
Bse118I RCCGGY 1 cut(s) 547
Bse1I ACTGG 5 cut(s) 124, 552, 1268, 1286, 1420
Bse8I GATNNNNATC 1 cut(s) 1125
BseBI CCWGG 3 cut(s) 646, 944, 1105
BseDI CCNNGG 3 cut(s) 250, 645, 942
BseGI GGATG 5 cut(s) 322, 862, 928, 1046, 1126
BseJI GATNNNNATC 1 cut(s) 1125
BseLI CCNNNNNNNGG 1 cut(s) 1177
BseMII CTCAG 3 cut(s) 616, 922, 1321
BseNI ACTGG 5 cut(s) 124, 552, 1268, 1286, 1420
BseXI GCAGC 5 cut(s) 270, 404, 448, 1439, 1486
BsgI GTGCAG 1 cut(s) 1446
BshFI GGCC 4 cut(s) 551, 729, 812, 1450
BshNI GGYRCC 1 cut(s) 246
BsiSI CCGG 2 cut(s) 548, 1178
BslFI GGGAC 1 cut(s) 417
BslI CCNNNNNNNGG 1 cut(s) 1177
BsmAI GTCTC 3 cut(s) 1029, 1276, 1514
BsmBI CGTCTC 1 cut(s) 1029
BsmFI GGGAC 1 cut(s) 417
BsmI GAATGC 1 cut(s) 1316
BsnI GGCC 4 cut(s) 551, 729, 812, 1450
Bso31I GGTCTC 1 cut(s) 1276
Bsp1407I TGTACA 2 cut(s) 619, 1008
Bsp143I GATC 5 cut(s) 269, 820, 1126, 1357, 1444
BspACI CCGC 2 cut(s) 534, 655
BspANI GGCC 4 cut(s) 551, 729, 812, 1450
BspCNI CTCAG 3 cut(s) 615, 921, 1320
BspLI GGNNCC 1 cut(s) 248
BspOI GCTAGC 1 cut(s) 722
BspPI GGATC 2 cut(s) 277, 1352
BspQI GCTCTTC 2 cut(s) 213, 1287
BspT107I GGYRCC 1 cut(s) 246
BspTNI GGTCTC 1 cut(s) 1276
BsrFI RCCGGY 1 cut(s) 547
BsrGI TGTACA 2 cut(s) 619, 1008
BsrI ACTGG 5 cut(s) 124, 552, 1268, 1286, 1420
BssAI RCCGGY 1 cut(s) 547
BssECI CCNNGG 3 cut(s) 250, 645, 942
BssMI GATC 5 cut(s) 269, 820, 1126, 1357, 1444
Bst2UI CCWGG 3 cut(s) 646, 944, 1105
Bst4CI ACNGT 5 cut(s) 105, 382, 703, 1162, 1465
Bst6I CTCTTC 3 cut(s) 213, 1274, 1287
BstAPI GCANNNNNTGC 1 cut(s) 83
BstAUI TGTACA 2 cut(s) 619, 1008
BstC8I GCNNGC 4 cut(s) 75, 720, 1073, 1077
BstDEI CTNAG 4 cut(s) 480, 602, 908, 1307
BstF5I GGATG 5 cut(s) 322, 862, 928, 1046, 1126
BstKTI GATC 5 cut(s) 272, 823, 1129, 1360, 1447
BstMAI GTCTC 3 cut(s) 1029, 1276, 1514
BstMBI GATC 5 cut(s) 269, 820, 1126, 1357, 1444
BstMWI GCNNNNNNNGC 7 cut(s) 83, 255, 401, 485, 719, 1085, 1382
BstNI CCWGG 3 cut(s) 646, 944, 1105
BstNSI RCATGY 1 cut(s) 1075
BstPAI GACNNNNGTC 1 cut(s) 613
BstSCI CCNGG 4 cut(s) 644, 942, 1103, 1176
BstSFI CTRYAG 1 cut(s) 1394
BstV1I GCAGC 5 cut(s) 270, 404, 448, 1439, 1486
BsuRI GGCC 4 cut(s) 551, 729, 812, 1450
BtrI CACGTC 1 cut(s) 1039
BtsCI GGATG 5 cut(s) 322, 862, 928, 1046, 1126
BtsI GCAGTG 1 cut(s) 1203
BtsIMutI CAGTG 5 cut(s) 186, 1203, 1275, 1427, 1470
Cac8I GCNNGC 4 cut(s) 75, 720, 1073, 1077
CaiI CAGNNNCTG 1 cut(s) 461
Cfr10I RCCGGY 1 cut(s) 547
Cfr13I GGNCC 2 cut(s) 121, 1112
CseI GACGC 1 cut(s) 494
Csp6I GTAC 6 cut(s) 65, 620, 792, 1009, 1183, 1391
CviAII CATG 7 cut(s) 335, 530, 932, 986, 1072, 1186, 1456
CviQI GTAC 6 cut(s) 65, 620, 792, 1009, 1183, 1391
DdeI CTNAG 4 cut(s) 480, 602, 908, 1307
DpnI GATC 5 cut(s) 271, 822, 1128, 1359, 1446
DpnII GATC 5 cut(s) 269, 820, 1126, 1357, 1444
DraIII CACNNNGTG 1 cut(s) 563
DriI GACNNNNNGTC 2 cut(s) 1042, 1260
EaeI YGGCCR 4 cut(s) 549, 727, 810, 1448
Eam1104I CTCTTC 3 cut(s) 213, 1274, 1287
Eam1105I GACNNNNNGTC 2 cut(s) 1042, 1260
EarI CTCTTC 3 cut(s) 213, 1274, 1287
Eco31I GGTCTC 1 cut(s) 1276
Eco47I GGWCC 2 cut(s) 121, 1112
EcoRI GAATTC 2 cut(s) 175, 785
EcoRII CCWGG 3 cut(s) 644, 942, 1103
Esp3I CGTCTC 1 cut(s) 1029
FaeI CATG 7 cut(s) 338, 533, 935, 989, 1075, 1189, 1459
FalI AAGNNNNNCTT 4 cut(s) 749, 781, 789, 821
FaqI GGGAC 1 cut(s) 417
FatI CATG 7 cut(s) 334, 529, 931, 985, 1071, 1185, 1455
FauI CCCGC 1 cut(s) 662
FbaI TGATCA 1 cut(s) 820
FblI GTMKAC 3 cut(s) 607, 705, 1221
Fnu4HI GCNGC 6 cut(s) 259, 393, 462, 534, 1428, 1475
FokI GGATG 5 cut(s) 329, 869, 935, 1033, 1133
Fsp4HI GCNGC 6 cut(s) 259, 393, 462, 534, 1428, 1475
FspBI CTAG 6 cut(s) 284, 573, 579, 719, 845, 1172
GluI GCNGC 6 cut(s) 259, 393, 462, 534, 1428, 1475
GsuI CTGGAG 1 cut(s) 965
HaeIII GGCC 4 cut(s) 551, 729, 812, 1450
HapII CCGG 2 cut(s) 548, 1178
HgaI GACGC 1 cut(s) 494
Hin1II CATG 7 cut(s) 338, 533, 935, 989, 1075, 1189, 1459
HincII GTYRAC 1 cut(s) 929
HindII GTYRAC 1 cut(s) 929
HindIII AAGCTT 2 cut(s) 110, 189
HinfI GANTC 5 cut(s) 320, 359, 526, 634, 829
HpaII CCGG 2 cut(s) 548, 1178
HphI GGTGA 1 cut(s) 695
Hpy166II GTNNAC 7 cut(s) 557, 608, 706, 929, 1011, 1222, 1482
Hpy188I TCNGA 8 cut(s) 254, 358, 639, 828, 911, 1062, 1116, 1310
Hpy188III TCNNGA 2 cut(s) 920, 1034
Hpy8I GTNNAC 7 cut(s) 557, 608, 706, 929, 1011, 1222, 1482
Hpy99I CGWCG 1 cut(s) 1266
HpyAV CCTTC 5 cut(s) 307, 680, 751, 854, 1328
HpyCH4III ACNGT 5 cut(s) 105, 382, 703, 1162, 1465
HpyCH4IV ACGT 4 cut(s) 748, 1038, 1343, 1389
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 255, 401, 485, 719, 1085, 1382
HpyF3I CTNAG 4 cut(s) 480, 602, 908, 1307
HpySE526I ACGT 4 cut(s) 748, 1038, 1343, 1389
Hsp92II CATG 7 cut(s) 338, 533, 935, 989, 1075, 1189, 1459
Ksp22I TGATCA 1 cut(s) 820
Kzo9I GATC 5 cut(s) 269, 820, 1126, 1357, 1444
LguI GCTCTTC 2 cut(s) 213, 1287
LmnI GCTCC 3 cut(s) 401, 1435, 1471
Lsp1109I GCAGC 5 cut(s) 270, 404, 448, 1439, 1486
LweI GCATC 1 cut(s) 1111
MaeI CTAG 6 cut(s) 284, 573, 579, 719, 845, 1172
MaeII ACGT 4 cut(s) 748, 1038, 1343, 1389
MaeIII GTNAC 2 cut(s) 1252, 1300
MalI GATC 5 cut(s) 271, 822, 1128, 1359, 1446
MboI GATC 5 cut(s) 269, 820, 1126, 1357, 1444
MboII GAAGA 8 cut(s) 200, 300, 504, 992, 1049, 1291, 1304, 1350
MfeI CAATTG 1 cut(s) 68
MlsI TGGCCA 2 cut(s) 729, 812
MluNI TGGCCA 2 cut(s) 729, 812
MmeI TCCRAC 2 cut(s) 364, 1074
MnlI CCTC 5 cut(s) 97, 235, 260, 1363, 1511
Mox20I TGGCCA 2 cut(s) 729, 812
MscI TGGCCA 2 cut(s) 729, 812
MseI TTAA 5 cut(s) 26, 47, 444, 951, 1503
MslI CAYNNNNRTG 1 cut(s) 921
Msp20I TGGCCA 2 cut(s) 729, 812
MspA1I CMGCKG 2 cut(s) 536, 1477
MspI CCGG 2 cut(s) 548, 1178
MspR9I CCNGG 4 cut(s) 646, 944, 1105, 1178
MunI CAATTG 1 cut(s) 68
Mva1269I GAATGC 1 cut(s) 1316
MvaI CCWGG 3 cut(s) 646, 944, 1105
MwoI GCNNNNNNNGC 7 cut(s) 83, 255, 401, 485, 719, 1085, 1382
NciI CCSGG 1 cut(s) 1178
NdeII GATC 5 cut(s) 269, 820, 1126, 1357, 1444
NheI GCTAGC 1 cut(s) 718
NlaIII CATG 7 cut(s) 338, 533, 935, 989, 1075, 1189, 1459
NlaIV GGNNCC 1 cut(s) 248
NmeAIII GCCGAG 1 cut(s) 694
NmuCI GTSAC 2 cut(s) 1252, 1300
NspI RCATGY 1 cut(s) 1075
PaeI GCATGC 1 cut(s) 1075
PciSI GCTCTTC 2 cut(s) 213, 1287
PctI GAATGC 1 cut(s) 1316
PfeI GAWTC 5 cut(s) 320, 359, 526, 634, 829
PkrI GCNGC 6 cut(s) 260, 394, 463, 535, 1429, 1476
PshAI GACNNNNGTC 1 cut(s) 613
Psp6I CCWGG 3 cut(s) 644, 942, 1103
PspGI CCWGG 3 cut(s) 644, 942, 1103
PspN4I GGNNCC 1 cut(s) 248
PspPI GGNCC 2 cut(s) 121, 1112
PstNI CAGNNNCTG 1 cut(s) 461
PvuII CAGCTG 1 cut(s) 1477
RsaI GTAC 6 cut(s) 66, 621, 793, 1010, 1184, 1392
RsaNI GTAC 6 cut(s) 65, 620, 792, 1009, 1183, 1391
RseI CAYNNNNRTG 1 cut(s) 921
SapI GCTCTTC 2 cut(s) 213, 1287
SaqAI TTAA 5 cut(s) 26, 47, 444, 951, 1503
SatI GCNGC 6 cut(s) 259, 393, 462, 534, 1428, 1475
Sau3AI GATC 5 cut(s) 269, 820, 1126, 1357, 1444
Sau96I GGNCC 2 cut(s) 121, 1112
ScrFI CCNGG 4 cut(s) 646, 944, 1105, 1178
SfaNI GCATC 1 cut(s) 1111
SfcI CTRYAG 1 cut(s) 1394
SinI GGWCC 2 cut(s) 121, 1112
SmiMI CAYNNNNRTG 1 cut(s) 921
SphI GCATGC 1 cut(s) 1075
SsiI CCGC 2 cut(s) 534, 655
SspMI CTAG 6 cut(s) 284, 573, 579, 719, 845, 1172
StyD4I CCNGG 4 cut(s) 644, 942, 1103, 1176
TaaI ACNGT 5 cut(s) 105, 382, 703, 1162, 1465
TaiI ACGT 4 cut(s) 751, 1041, 1346, 1392
TaqI TCGA 3 cut(s) 1033, 1129, 1438
TatI WGTACW 4 cut(s) 619, 791, 1008, 1182
TauI GCSGC 1 cut(s) 536
TfiI GAWTC 5 cut(s) 320, 359, 526, 634, 829
Tru1I TTAA 5 cut(s) 26, 47, 444, 951, 1503
Tru9I TTAA 5 cut(s) 26, 47, 444, 951, 1503
TscAI CASTG 5 cut(s) 186, 1210, 1275, 1427, 1470
TseFI GTSAC 2 cut(s) 1252, 1300
TseI GCWGC 5 cut(s) 258, 392, 461, 1427, 1474
Tsp45I GTSAC 2 cut(s) 1252, 1300
TspDTI ATGAA 7 cut(s) 333, 873, 882, 992, 1202, 1292, 1472
TspGWI ACGGA 1 cut(s) 12
TspRI CASTG 5 cut(s) 186, 1210, 1275, 1427, 1470
VpaK11BI GGWCC 2 cut(s) 121, 1112
XapI RAATTY 4 cut(s) 175, 490, 772, 785
XceI RCATGY 1 cut(s) 1075
XmiI GTMKAC 3 cut(s) 607, 705, 1221
XspI CTAG 6 cut(s) 284, 573, 579, 719, 845, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.