AT2G17140

Pentacotripeptide-repeat region of PRORP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0004810
Physical Location & Seq
Forward (+)
7462809 .. 7466898
4090 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G17140.1

Sequence Viewer

Length: 2625 bp
ATGGAACAATCTCTTGTGAAGGCTTTGTTGAAGAACACGAACAATCCGAGATTAGCATGGAGAATCTTCAAGAGGATATTCTCTTCTCCTTCAGAAGAAAGCCATGGCATTTCTTTAGATGCGACTCCTACAATCGCTCGTATCCTGGTTCGAGCCAAAATGCACGAAGAAATCCAAGAGCTTCACAATCTTATACTCTCTTCTTCAATCCAAAAGACGAAACTTTCGTCTCTTCTCTCTGTTGTATCCATCTTCGCGAAATCGAATCACATTGATAAGGCGTTTCCGCAGTTTCAGTTAGTACGGTCGCGGTTTCCTGAGAACAAACCTAGCGTTTATCTGTATAATTTGTTGCTTGAAAGTTGCATAAAGGAACGACGTGTGGAGTTCGTTTCGTGGTTGTATAAAGATATGGTTTTGTGTGGGATTGCTCCACAGACTTATACTTTTAATCTCTTGATACGTGCTTTGTGTGATTCAAGTTGTGTTGATGCTGCTCGAGAGTTGTTCGACGAAATGCCTGAGAAAGGTTGTAAGCCAAATGAGTTTACTTTTGGGATTTTGGTTCGTGGGTATTGTAAAGCTGGTTTGACTGATAAAGGGCTTGAATTGTTGAATGCAATGGAAAGTTTTGGGGTTTTGCCTAATAAAGTTATCTATAACACCATTGTTTCGAGCTTCTGTAGAGAAGGTAGGAATGATGATTCTGAAAAGATGGTGGAGAAGATGCGGGAGGAAGGTTTGGTGCCTGATATTGTCACTTTTAACTCTAGGATATCAGCGCTTTGTAAAGAAGGAAAGGTTTTGGATGCGTCTAGAATTTTCAGTGATATGGAGCTAGATGAGTATCTGGGTCTTCCTCGTCCCAATAGTATAACATATAACTTGATGTTGAAAGGTTTCTGTAAGGTAGGGTTGCTGGAAGATGCCAAGACCCTCTTTGAGTCGATTAGAGAAAATGATGATCTCGCTAGCTTGCAGAGTTACAATATTTGGCTGCAGGGTTTGGTCAGACATGGGAAGTTTATAGAGGCTGAAACAGTCCTGAAGCAAATGACTGATAAGGGAATAGGACCAAGTATTTATTCTTACAATATCTTGATGGATGGATTGTGTAAATTGGGCATGCTATCCGATGCAAAAACTATTGTTGGTTTGATGAAAAGAAATGGTGTTTGCCCGGATGCTGTAACTTATGGCTGCCTTCTTCATGGTTATTGCAGTGTTGGGAAAGTCGATGCAGCTAAAAGCTTGTTGCAGGAGATGATGAGGAATAATTGTTTACCAAATGCTTATACTTGCAATATTTTGCTACATAGCCTTTGGAAGATGGGGAGAATATCTGAAGCGGAAGAGTTGCTGCGAAAGATGAATGAGAAAGGTTATGGACTAGACACTGTCACCTGCAACATTATCGTTGACGGACTCTGTGGAAGCGGGGAATTAGATAAAGCTATTGAGATAGTTAAGGGAATGCGGGTGCATGGAAGTGCTGCTCTTGGTAACTTAGGCAATTCATATATCGGACTGGTGGATGATAGCTTGATCGAGAACAACTGTTTGCCTGACCTGATCACGTATTCAACTTTACTTAATGGTTTGTGCAAAGCTGGAAGGTTTGCTGAAGCAAAAAATTTGTTTGCCGAGATGATGGGAGAGAAACTGCAACCGGACTCGGTCGCATATAACATTTTCATTCATCATTTCTGCAAACAGGGGAAAATATCATCTGCATTTCGCGTTCTCAAAGACATGGAGAAGAAAGGTTGTCATAAGAGCCTAGAGACTTATAACTCACTGATCCTGGGCTTAGGCATAAAAAACCAGATTTTTGAAATTCATGGACTGATGGATGAGATGAAAGAAAAGGGCATTTCACCAAATATATGCACCTACAATACTGCAATCCAGTATCTTTGTGAGGGAGAAAAAGTTGAAGATGCAACTAACCTCCTTGATGAAATGATGCAAAAGAACATAGCCCCAAATGTATTTTCCTTCAAATATTTGATTGAAGCGTTCTGTAAGGTCCCTGATTTTGATATGGCCCAAGAAGTCTTTGAGACTGCTGTAAGTATCTGTGGACAGAAAGAAGGCCTGTACAGCTTGATGTTCAATGAGTTGCTTGCTGCAGGGCAACTACTAAAGGCTACGGAGTTGCTCGAAGCTGTTTTAGATAGAGGTTTTGAGTTGGGGACTTTTCTTTATAAAGATCTTGTTGAGAGCTTATGTAAGAAGGATGAACTAGAAGTAGCTAGTGGAATTTTGCATAAGATGATAGACAGAGGATATGGATTTGACCCTGCAGCATTGATGCCTGTGATAGATGGCTTAGGTAAGATGGGAAACAAGAAAGAGGCAAACAGTTTTGCTGATAAGATGATGGAAATGGCTTCAGTTGGTGAAGTAGCAAACAAAGTCGATCCAAATGCAAGGGATATACACCAGAAAAAGCATAATAAGAATGGTGGAAACAACTGGCAGAATATATTACACAGAGATGACGGTAGTGGAATTGCGTTAAGGTCTCTGTCAAGAGTTAAAAAAGGATGGGGTCAAGGGGATATATCAAGCTTTCAGCCTCCAAGAGTTGACTACTTAGACTACTGGGAGGACGATGGTTAA

Protein Analysis

874

Amino Acids

97.74

Weight (kDa)

5.87

Isoelectric Point (pI)

38.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 110 - 159 1.8e-08 PPR repeat family
PPR_long PF17177 115 - 251 1.5e-09 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 135 - 190 3e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 142 - 173 9.9e-06 PPR repeat
PPR_2 PF13041 147 - 194 1.7e-15 PPR repeat family
PPR PF01535 148 - 178 1.6e-06 PPR repeat
TPR_24 PF23276 168 - 277 5.8e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 176 - 209 1.3e-10 PPR repeat
PPR PF01535 183 - 213 7.9e-06 PPR repeat
PPR_3 PF13812 204 - 262 3.8e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 212 - 244 1.2e-10 PPR repeat
PPR_2 PF13041 215 - 264 7e-12 PPR repeat family
PPR_1 PF12854 247 - 279 5.6e-09 PPR repeat
PPR_2 PF13041 250 - 279 7.8e-06 PPR repeat family
PPR_1 PF12854 289 - 316 1.2e-07 PPR repeat
PPR PF01535 292 - 320 8.1e-06 PPR repeat
PPR_2 PF13041 328 - 373 7.3e-12 PPR repeat family
PPR_1 PF12854 355 - 387 4e-06 PPR repeat
PPR_2 PF13041 359 - 407 2.9e-13 PPR repeat family
PPR PF01535 362 - 392 1.8e-06 PPR repeat
PPR_3 PF13812 386 - 439 1.4e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 390 - 422 6.6e-11 PPR repeat
PPR_2 PF13041 394 - 441 3.8e-15 PPR repeat family
PPR PF01535 397 - 427 7.5e-07 PPR repeat
TPR_24 PF23276 398 - 488 2.7e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 433 - 477 5.5e-09 PPR repeat family
PPR_1 PF12854 519 - 550 2.6e-12 PPR repeat
PPR_2 PF13041 522 - 564 3.3e-11 PPR repeat family
PPR PF01535 525 - 553 1.4e-06 PPR repeat
PPR_3 PF13812 546 - 601 2.2e-08 Pentatricopeptide repeat domain
TPR_24 PF23276 554 - 652 6.6e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 555 - 586 6.2e-09 PPR repeat
PPR_2 PF13041 557 - 604 2.6e-14 PPR repeat family
PPR PF01535 560 - 590 4.9e-06 PPR repeat
PPR_2 PF13041 595 - 640 3e-10 PPR repeat family
PPR_long PF17177 612 - 689 7e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 616 - 674 5.3e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 623 - 655 2e-08 PPR repeat
PPR_2 PF13041 627 - 676 2.9e-14 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1791, 2208
AarI CACCTGC 1 cut(s) 1412
Acc36I ACCTGC 1 cut(s) 1412
AccB1I GGYRCC 1 cut(s) 745
AccII CGCG 3 cut(s) 257, 310, 1740
AciI CCGC 6 cut(s) 287, 310, 730, 1349, 1437, 1477
AclWI GGATC 2 cut(s) 1795, 2417
AcsI RAATTY 4 cut(s) 819, 1633, 1836, 2262
AcuI CTGAAG 5 cut(s) 75, 1067, 1365, 1644, 2379
AfaI GTAC 2 cut(s) 303, 2102
AfeI AGCGCT 1 cut(s) 783
AfiI CCNNNNNNNGG 1 cut(s) 527
AflIII ACRYGT 1 cut(s) 379
AjiI CACGTC 1 cut(s) 380
AjnI CCWGG 2 cut(s) 144, 1803
AjuI GAANNNNNNNTTGG 4 cut(s) 1069, 1101, 1978, 2010
Alw26I GTCTC 4 cut(s) 234, 1778, 2057, 2532
AlwI GGATC 2 cut(s) 1795, 2417
Ama87I CYCGRG 1 cut(s) 498
Aor51HI AGCGCT 1 cut(s) 783
AoxI GGCC 2 cut(s) 2046, 2095
ApeKI GCWGC 8 cut(s) 494, 997, 1200, 1241, 1360, 1493, 2129, 2306
ApoI RAATTY 4 cut(s) 819, 1633, 1836, 2262
ArsI GACNNNNNNTTYG 4 cut(s) 208, 212, 240, 244
Asp700I GAANNNNTTC 1 cut(s) 899
AspLEI GCGC 1 cut(s) 784
AspS9I GGNCC 3 cut(s) 1073, 2029, 2047
AsuC2I CCSGG 1 cut(s) 1181
AsuHPI GGTGA 3 cut(s) 1393, 1869, 2414
AsuNHI GCTAGC 1 cut(s) 971
AvaI CYCGRG 1 cut(s) 498
AvaII GGWCC 2 cut(s) 1073, 2029
BanI GGYRCC 1 cut(s) 745
BbsI GAAGAC 1 cut(s) 848
BbvI GCAGC 8 cut(s) 481, 984, 1187, 1253, 1347, 1480, 2116, 2318
BcgI CGANNNNNNTGC 4 cut(s) 1396, 1430, 2411, 2445
BciT130I CCWGG 2 cut(s) 146, 1805
BciVI GTATCC 2 cut(s) 152, 256
BclI TGATCA 1 cut(s) 1572
BcnI CCSGG 1 cut(s) 1181
BcoDI GTCTC 4 cut(s) 234, 1778, 2057, 2532
BfaI CTAG 9 cut(s) 330, 771, 816, 839, 972, 1391, 1781, 2246, 2256
BfmI CTRYAG 4 cut(s) 682, 998, 2130, 2304
BfoI RGCGCY 1 cut(s) 785
BfuAI ACCTGC 1 cut(s) 1412
BfuI GTATCC 2 cut(s) 152, 256
BglII AGATCT 1 cut(s) 2212
BisI GCNGC 8 cut(s) 495, 998, 1201, 1242, 1361, 1494, 2130, 2307
BlsI GCNGC 8 cut(s) 496, 999, 1202, 1243, 1362, 1495, 2131, 2308
Bme1390I CCNGG 3 cut(s) 146, 1181, 1805
Bme18I GGWCC 2 cut(s) 1073, 2029
BmeT110I CYCGRG 1 cut(s) 498
BmgBI CACGTC 1 cut(s) 380
BmgT120I GGNCC 3 cut(s) 1073, 2029, 2047
BmiI GGNNCC 2 cut(s) 747, 2031
BmrFI CCNGG 3 cut(s) 146, 1181, 1805
BmrI ACTGGG 1 cut(s) 2617
BmtI GCTAGC 1 cut(s) 975
BmuI ACTGGG 1 cut(s) 2617
BpiI GAAGAC 1 cut(s) 848
Bpu10I CCTNAGC 2 cut(s) 1810, 2332
BpuMI CCSGG 1 cut(s) 1181
BsaAI YACGTR 2 cut(s) 464, 1578
BsaBI GATNNNNATC 1 cut(s) 846
BsaI GGTCTC 1 cut(s) 2532
BsaJI CCNNGG 2 cut(s) 103, 1804
BsaWI WCCGGW 1 cut(s) 1669
BsaXI ACNNNNNCTCC 2 cut(s) 1917, 1947
Bsc4I CCNNNNNNNGG 1 cut(s) 527
Bse1I ACTGG 4 cut(s) 1533, 1909, 2483, 2612
Bse3DI GCAATG 1 cut(s) 627
Bse8I GATNNNNATC 1 cut(s) 846
BseBI CCWGG 2 cut(s) 146, 1805
BseDI CCNNGG 2 cut(s) 103, 1804
BseGI GGATG 7 cut(s) 814, 1111, 1189, 1540, 1858, 2245, 2555
BseJI GATNNNNATC 1 cut(s) 846
BseLI CCNNNNNNNGG 1 cut(s) 527
BseMI GCAATG 1 cut(s) 627
BseMII CTCAG 2 cut(s) 309, 513
BseNI ACTGG 4 cut(s) 1533, 1909, 2483, 2612
BseXI GCAGC 8 cut(s) 481, 984, 1187, 1253, 1347, 1480, 2116, 2318
Bsh1236I CGCG 3 cut(s) 257, 310, 1740
Bsh1285I CGRYCG 2 cut(s) 308, 1680
BshFI GGCC 2 cut(s) 2048, 2097
BshNI GGYRCC 1 cut(s) 745
BsiEI CGRYCG 2 cut(s) 308, 1680
BsiHKCI CYCGRG 1 cut(s) 498
BsiSI CCGG 2 cut(s) 1181, 1670
BslFI GGGAC 3 cut(s) 849, 2015, 2209
BslI CCNNNNNNNGG 1 cut(s) 527
BsmAI GTCTC 4 cut(s) 234, 1778, 2057, 2532
BsmBI CGTCTC 1 cut(s) 234
BsmFI GGGAC 3 cut(s) 849, 2015, 2209
BsmI GAATGC 2 cut(s) 622, 1479
BsnI GGCC 2 cut(s) 2048, 2097
Bso31I GGTCTC 1 cut(s) 2532
BsoBI CYCGRG 1 cut(s) 498
Bsp1407I TGTACA 1 cut(s) 2100
Bsp143I GATC 6 cut(s) 964, 1545, 1572, 1800, 2212, 2422
Bsp19I CCATGG 1 cut(s) 103
Bsp68I TCGCGA 1 cut(s) 257
BspACI CCGC 6 cut(s) 287, 310, 730, 1349, 1437, 1477
BspANI GGCC 2 cut(s) 2048, 2097
BspCNI CTCAG 2 cut(s) 310, 514
BspFNI CGCG 3 cut(s) 257, 310, 1740
BspLI GGNNCC 2 cut(s) 747, 2031
BspMAI CTGCAG 3 cut(s) 1002, 2134, 2308
BspMI ACCTGC 1 cut(s) 1412
BspOI GCTAGC 1 cut(s) 975
BspPI GGATC 2 cut(s) 1795, 2417
BspT107I GGYRCC 1 cut(s) 745
BspTNI GGTCTC 1 cut(s) 2532
BsrDI GCAATG 1 cut(s) 627
BsrGI TGTACA 1 cut(s) 2100
BsrI ACTGG 4 cut(s) 1533, 1909, 2483, 2612
BssECI CCNNGG 2 cut(s) 103, 1804
BssMI GATC 6 cut(s) 964, 1545, 1572, 1800, 2212, 2422
BssT1I CCWWGG 1 cut(s) 103
Bst2UI CCWGG 2 cut(s) 146, 1805
Bst4CI ACNGT 6 cut(s) 306, 1042, 1399, 1559, 2366, 2507
Bst6I CTCTTC 4 cut(s) 88, 205, 237, 1347
BstAUI TGTACA 1 cut(s) 2100
BstBAI YACGTR 2 cut(s) 464, 1578
BstC8I GCNNGC 4 cut(s) 973, 977, 1127, 2127
BstDEI CTNAG 6 cut(s) 318, 522, 1507, 1810, 2332, 2599
BstDSI CCRYGG 1 cut(s) 103
BstENI CCTNNNNNAGG 1 cut(s) 525
BstF5I GGATG 7 cut(s) 814, 1111, 1189, 1540, 1858, 2245, 2555
BstFNI CGCG 3 cut(s) 257, 310, 1740
BstH2I RGCGCY 1 cut(s) 785
BstHHI GCGC 1 cut(s) 784
BstKTI GATC 6 cut(s) 967, 1548, 1575, 1803, 2215, 2425
BstMAI GTCTC 4 cut(s) 234, 1778, 2057, 2532
BstMBI GATC 6 cut(s) 964, 1545, 1572, 1800, 2212, 2422
BstMCI CGRYCG 2 cut(s) 308, 1680
BstMWI GCNNNNNNNGC 1 cut(s) 2103
BstNI CCWGG 2 cut(s) 146, 1805
BstNSI RCATGY 1 cut(s) 1129
BstSCI CCNGG 3 cut(s) 144, 1179, 1803
BstSFI CTRYAG 4 cut(s) 682, 998, 2130, 2304
BstUI CGCG 3 cut(s) 257, 310, 1740
BstV1I GCAGC 8 cut(s) 481, 984, 1187, 1253, 1347, 1480, 2116, 2318
BstV2I GAAGAC 1 cut(s) 848
BstX2I RGATCY 1 cut(s) 2212
BstYI RGATCY 1 cut(s) 2212
BsuI GTATCC 2 cut(s) 152, 256
BsuRI GGCC 2 cut(s) 2048, 2097
BtgI CCRYGG 1 cut(s) 103
BtrI CACGTC 1 cut(s) 380
BtsCI GGATG 7 cut(s) 814, 1111, 1189, 1540, 1858, 2245, 2555
BtsI GCAGTG 1 cut(s) 1228
BtsIMutI CAGTG 4 cut(s) 832, 1228, 1395, 1796
BtuMI TCGCGA 1 cut(s) 257
BveI ACCTGC 1 cut(s) 1412
Cac8I GCNNGC 4 cut(s) 973, 977, 1127, 2127
CfoI GCGC 1 cut(s) 784
Cfr13I GGNCC 3 cut(s) 1073, 2029, 2047
CseI GACGC 1 cut(s) 801
Csp6I GTAC 2 cut(s) 302, 2101
CviAII CATG 8 cut(s) 57, 104, 1016, 1126, 1211, 1484, 1753, 1841
CviQI GTAC 2 cut(s) 302, 2101
DdeI CTNAG 6 cut(s) 318, 522, 1507, 1810, 2332, 2599
DpnI GATC 6 cut(s) 966, 1547, 1574, 1802, 2214, 2424
DpnII GATC 6 cut(s) 964, 1545, 1572, 1800, 2212, 2422
Eam1104I CTCTTC 4 cut(s) 88, 205, 237, 1347
EarI CTCTTC 4 cut(s) 88, 205, 237, 1347
Eco130I CCWWGG 1 cut(s) 103
Eco147I AGGCCT 1 cut(s) 2097
Eco31I GGTCTC 1 cut(s) 2532
Eco32I GATATC 1 cut(s) 777
Eco47I GGWCC 2 cut(s) 1073, 2029
Eco47III AGCGCT 1 cut(s) 783
Eco57I CTGAAG 5 cut(s) 75, 1067, 1365, 1644, 2379
Eco88I CYCGRG 1 cut(s) 498
EcoNI CCTNNNNNAGG 1 cut(s) 525
EcoO109I RGGNCCY 1 cut(s) 2029
EcoRII CCWGG 2 cut(s) 144, 1803
EcoRV GATATC 1 cut(s) 777
EcoT14I CCWWGG 1 cut(s) 103
ErhI CCWWGG 1 cut(s) 103
Esp3I CGTCTC 1 cut(s) 234
FaeI CATG 8 cut(s) 60, 107, 1019, 1129, 1214, 1487, 1756, 1844
FalI AAGNNNNNCTT 2 cut(s) 923, 955
FaqI GGGAC 3 cut(s) 849, 2015, 2209
FatI CATG 8 cut(s) 56, 103, 1015, 1125, 1210, 1483, 1752, 1840
FauI CCCGC 3 cut(s) 723, 1430, 1470
FbaI TGATCA 1 cut(s) 1572
Fnu4HI GCNGC 8 cut(s) 495, 998, 1201, 1242, 1361, 1494, 2130, 2307
FokI GGATG 7 cut(s) 821, 1118, 1196, 1547, 1865, 2252, 2562
Fsp4HI GCNGC 8 cut(s) 495, 998, 1201, 1242, 1361, 1494, 2130, 2307
FspBI CTAG 9 cut(s) 330, 771, 816, 839, 972, 1391, 1781, 2246, 2256
GlaI GCGC 1 cut(s) 783
GluI GCNGC 8 cut(s) 495, 998, 1201, 1242, 1361, 1494, 2130, 2307
HaeII RGCGCY 1 cut(s) 785
HaeIII GGCC 2 cut(s) 2048, 2097
HapII CCGG 2 cut(s) 1181, 1670
HgaI GACGC 1 cut(s) 801
HhaI GCGC 1 cut(s) 784
Hin1II CATG 8 cut(s) 60, 107, 1019, 1129, 1214, 1487, 1756, 1844
Hin6I GCGC 1 cut(s) 782
HinP1I GCGC 1 cut(s) 782
HincII GTYRAC 2 cut(s) 1420, 2593
HindII GTYRAC 2 cut(s) 1420, 2593
HindIII AAGCTT 2 cut(s) 1249, 2572
HinfI GANTC 8 cut(s) 63, 124, 265, 476, 704, 944, 1425, 1673
HpaII CCGG 2 cut(s) 1181, 1670
HphI GGTGA 3 cut(s) 1393, 1869, 2414
Hpy166II GTNNAC 5 cut(s) 549, 1283, 1420, 2084, 2593
Hpy188I TCNGA 7 cut(s) 48, 94, 709, 1013, 1135, 1345, 1526
Hpy8I GTNNAC 5 cut(s) 549, 1283, 1420, 2084, 2593
Hpy99I CGWCG 2 cut(s) 381, 515
HpyCH4III ACNGT 6 cut(s) 306, 1042, 1399, 1559, 2366, 2507
HpyCH4IV ACGT 3 cut(s) 379, 463, 1577
HpyF10VI GCNNNNNNNGC 1 cut(s) 2103
HpyF3I CTNAG 6 cut(s) 318, 522, 1507, 1810, 2332, 2599
HpySE526I ACGT 3 cut(s) 379, 463, 1577
Hsp92II CATG 8 cut(s) 60, 107, 1019, 1129, 1214, 1487, 1756, 1844
HspAI GCGC 1 cut(s) 782
Ksp22I TGATCA 1 cut(s) 1572
Kzo9I GATC 6 cut(s) 964, 1545, 1572, 1800, 2212, 2422
LmnI GCTCC 2 cut(s) 436, 835
Lsp1109I GCAGC 8 cut(s) 481, 984, 1187, 1253, 1347, 1480, 2116, 2318
MaeI CTAG 9 cut(s) 330, 771, 816, 839, 972, 1391, 1781, 2246, 2256
MaeII ACGT 3 cut(s) 379, 463, 1577
MaeIII GTNAC 5 cut(s) 757, 983, 1189, 1399, 1502
MalI GATC 6 cut(s) 966, 1547, 1574, 1802, 2214, 2424
MboI GATC 6 cut(s) 964, 1545, 1572, 1800, 2212, 2422
MflI RGATCY 1 cut(s) 2212
MlyI GAGTC 4 cut(s) 118, 953, 1419, 1667
MroXI GAANNNNTTC 1 cut(s) 899
MseI TTAA 7 cut(s) 450, 765, 1467, 1593, 2522, 2541, 2623
MslI CAYNNNNRTG 2 cut(s) 1488, 2499
MspI CCGG 2 cut(s) 1181, 1670
MspR9I CCNGG 3 cut(s) 146, 1181, 1805
Mva1269I GAATGC 2 cut(s) 622, 1479
MvaI CCWGG 2 cut(s) 146, 1805
MvnI CGCG 3 cut(s) 257, 310, 1740
MwoI GCNNNNNNNGC 1 cut(s) 2103
NciI CCSGG 1 cut(s) 1181
NcoI CCATGG 1 cut(s) 103
NdeII GATC 6 cut(s) 964, 1545, 1572, 1800, 2212, 2422
NheI GCTAGC 1 cut(s) 971
NlaIII CATG 8 cut(s) 60, 107, 1019, 1129, 1214, 1487, 1756, 1844
NlaIV GGNNCC 2 cut(s) 747, 2031
NmeAIII GCCGAG 1 cut(s) 1669
NmuCI GTSAC 2 cut(s) 757, 1399
NruI TCGCGA 1 cut(s) 257
NspI RCATGY 1 cut(s) 1129
PaeI GCATGC 1 cut(s) 1129
PaeR7I CTCGAG 1 cut(s) 498
PaqCI CACCTGC 1 cut(s) 1412
PceI AGGCCT 1 cut(s) 2097
PcsI WCGNNNNNNNCGW 2 cut(s) 44, 224
PctI GAATGC 2 cut(s) 622, 1479
PdmI GAANNNNTTC 1 cut(s) 899
PfeI GAWTC 4 cut(s) 63, 265, 476, 704
PflFI GACNNNGTC 2 cut(s) 1397, 1676
PkrI GCNGC 8 cut(s) 496, 999, 1202, 1243, 1362, 1495, 2131, 2308
PleI GAGTC 4 cut(s) 118, 952, 1419, 1667
PpsI GAGTC 4 cut(s) 118, 952, 1419, 1667
Ppu21I YACGTR 2 cut(s) 464, 1578
PpuMI RGGWCCY 1 cut(s) 2029
PsiI TTATAA 2 cut(s) 1791, 2208
Psp5II RGGWCCY 1 cut(s) 2029
Psp6I CCWGG 2 cut(s) 144, 1803
PspGI CCWGG 2 cut(s) 144, 1803
PspN4I GGNNCC 2 cut(s) 747, 2031
PspPI GGNCC 3 cut(s) 1073, 2029, 2047
PspPPI RGGWCCY 1 cut(s) 2029
PstI CTGCAG 3 cut(s) 1002, 2134, 2308
PsuI RGATCY 1 cut(s) 2212
PsyI GACNNNGTC 2 cut(s) 1397, 1676
RruI TCGCGA 1 cut(s) 257
RsaI GTAC 2 cut(s) 303, 2102
RsaNI GTAC 2 cut(s) 302, 2101
RseI CAYNNNNRTG 2 cut(s) 1488, 2499
SaqAI TTAA 7 cut(s) 450, 765, 1467, 1593, 2522, 2541, 2623
SatI GCNGC 8 cut(s) 495, 998, 1201, 1242, 1361, 1494, 2130, 2307
Sau3AI GATC 6 cut(s) 964, 1545, 1572, 1800, 2212, 2422
Sau96I GGNCC 3 cut(s) 1073, 2029, 2047
SchI GAGTC 4 cut(s) 118, 953, 1419, 1667
ScrFI CCNGG 3 cut(s) 146, 1181, 1805
SfcI CTRYAG 4 cut(s) 682, 998, 2130, 2304
Sfr274I CTCGAG 1 cut(s) 498
SinI GGWCC 2 cut(s) 1073, 2029
SlaI CTCGAG 1 cut(s) 498
SmiMI CAYNNNNRTG 2 cut(s) 1488, 2499
SmlI CTYRAG 1 cut(s) 498
SmoI CTYRAG 1 cut(s) 498
SphI GCATGC 1 cut(s) 1129
SseBI AGGCCT 1 cut(s) 2097
SsiI CCGC 6 cut(s) 287, 310, 730, 1349, 1437, 1477
SspI AATATT 3 cut(s) 991, 1306, 2006
SspMI CTAG 9 cut(s) 330, 771, 816, 839, 972, 1391, 1781, 2246, 2256
StuI AGGCCT 1 cut(s) 2097
StyD4I CCNGG 3 cut(s) 144, 1179, 1803
StyI CCWWGG 1 cut(s) 103
TaaI ACNGT 6 cut(s) 306, 1042, 1399, 1559, 2366, 2507
TaiI ACGT 3 cut(s) 382, 466, 1580
TaqII GACCGA 1 cut(s) 1666
TatI WGTACW 1 cut(s) 2100
TfiI GAWTC 4 cut(s) 63, 265, 476, 704
Tru1I TTAA 7 cut(s) 450, 765, 1467, 1593, 2522, 2541, 2623
Tru9I TTAA 7 cut(s) 450, 765, 1467, 1593, 2522, 2541, 2623
TscAI CASTG 4 cut(s) 832, 1228, 1402, 1803
TseFI GTSAC 2 cut(s) 757, 1399
TseI GCWGC 8 cut(s) 494, 997, 1200, 1241, 1360, 1493, 2129, 2306
Tsp45I GTSAC 2 cut(s) 757, 1399
TspGWI ACGGA 2 cut(s) 1437, 2168
TspRI CASTG 4 cut(s) 832, 1228, 1402, 1803
Tth111I GACNNNGTC 2 cut(s) 1397, 1676
VpaK11BI GGWCC 2 cut(s) 1073, 2029
XagI CCTNNNNNAGG 1 cut(s) 525
XapI RAATTY 4 cut(s) 819, 1633, 1836, 2262
XbaI TCTAGA 1 cut(s) 815
XceI RCATGY 1 cut(s) 1129
XhoI CTCGAG 1 cut(s) 498
XmnI GAANNNNTTC 1 cut(s) 899
XspI CTAG 9 cut(s) 330, 771, 816, 839, 972, 1391, 1781, 2246, 2256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.