Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0004810

Physical Location & Seq

Genomic Coordinates Reverse (-)

14504003 .. 14510396

Gene Structure 6394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g16640.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2616 bp

ATGGAGCCAGCAGCTCTGACCAAAGCTCTACACAACAACACCAACAACCCCAAACTCGCATGGCACCTCTTCAAGCGCATCCTCTCCTCCCCCACCTCCACCTCAACCTCCACCTCCTCCTCACATCTCTCCCTCCCCATCATAGCCCGCATCCTCATCTCCTCCAAAATGCACCCTGAAATCGACACCCTCCACCGCCTCCTCCTCCACTCACAACCCCCACAAACCCTCCGCCCTTCCCTCCTTTCCCTCGTCCGAATCTTCGCCAAATCCAACCTCCCCTACAAGGCCCTTTCGCATTTCAAGTCCCTCCGAAGCCGCTTCCCCAATGACCCTCCTCCTGTTTATCTCTATAATCTTCTCCTCGAGTCCACTCTTCGAAACAACGACGTCGATTACGTCCTGTGGTTGTATAAGGACATGATCGCTTCCGGGGTTCGGCCCCAGACGTATACTTTTAATCTCCTGATCTGTGCGCTTTGTGATTGCAGTCGTTTGGAAGATGCACGCCAGGTGTTTGATAAAATGCGTGACAAGGGCTGTGTGCCGAACGAGTACAGCGTTGCGATTCTGGTTCGTGGGTATTGCAGAGCTGGGTTTGGTAGTGATGCTTTGGACGTTTTGGATGAGATGAGGGGTTGTGGTGTTGGGGTTAATAGGGTTGTGTATAATACCTTGGTTTCGAGTTTTTGTAAAGAAGGGAGGACTGATGAGGCTGAGAAATTGGTGGAGAGGATGAGGGAGGAGGGTATGTTTCCGGATGTCATTACTTTCAATTCTCGGATTTCGGCTCTGTGCAGTGCAGGGAAGATTCTTGAAGCGTCTAGAATATTTAGAGATATGCATATGGATCAGGCTTTGGGGCTGCCTCAACCGAATGTGGTAACGTATAATCTGATGTTACAGGGGTTTTGCAAGGAAGGGATGTTAGAGGAAGCAGAGAGCTTGTTCAAGTCTATGGAAAAGGCTGGTGGTTTGATTAATTTAGAGAGCTATAACATATGGTTGTTGGGTTTGGTCAGGAATAAGAAGCTATTGGAGGCCCGACTGGTTCTGAAAGAAATGGTACATAAGGGAATAGAACTGAATATTTACTCGTATAACATTTTGATAAATGGGTTATGCAAAAATGGGATGCTCCGTGATGCAAGAATGGTGATGGATCTAATGGCAAGAAACAATATTTCGCCAGATACGGTCACATATAGTACTTTACTACATGGATACTGCAATAAAGGGAAGGTATTTGAAGCCAGCAATGTTTTGCAAGAGATGATAATGAAGAATTGCTTCCCAAATACTCATACCTGCAACATTCTGCTGCACAGCCTATGGAAAGAGGGACGAATATCAGAAGCGGAGGAACTGCTGCAGAAGATGAATGAGAAAGGTTATGGGTTAGATACTGTGACCTGCAACATTGTGATTGATGGTTTATGCAACGATGGGAAATTGGACAAAGCAATTGAAATTGTAAGTGGGATGTGGACTCATGGAGGTGCGGCTCTTGGAAACTTAGGGAACTCCTTTGTTGGCCTGGTTGACGATTGTAATAATGGGAATAAATGTCTTCCAGATTTGATCTCATATTCAACCATAATTAGTGGATTATGCAAGGCTGGGAGGCTTGATGAAGCTAAGAAGAAGTTCATGGAGATGATGGGGAGGAACTTGCATCCCGATTCAGTGATTTATGATACTTTCATACGTACTTTTTGTAAAGAAGGAAAGATATCATCTGCATTTCGGGTGTTGAAGGACATGGAGAAGAAAGGTTGCAACAAGAGCATTCAAACTTATAATTCACTAATCCTGGGCATAGGGAGTAAAAAGCAAATATTTGAAATATATGGGCTGATGGATGAAATGAAAGAAAGGGGAGTCCCTCCTGATGTATGTACTTACAATAATATGATGACCTGTCTCTGTGAAGTAGAGAGAGTCAAAGATGCAACTTCTCTTCTAGATGAAATGCTGCAGAAGGGCATATCCCCGAATATTTCCACCTTCAGAATATTGATTAAAGCTTTCTGCAAGGGCTTTGATTTTGCAGTCGCACAGGAGGTATTTGACATTGCTTTAAGTGTATGTGGCCACAAGGAAGCCTTATATAGTATGATGTTCAATGAATTACTTGCTGGAGGGGAAGTCGCAAAAGCTACAGAACTATTTAAAGAAGCGTTGGACAAGTACTTTTATCTGGGGAATTTCCTTTATAAAGACCTCATGGATAGACTCTGCATGGATCAAAAGTTAGATGATGCCTGTAGCATTCTTCACAATATGATGAATAAGGGATACGGGTTTGATTCAGCATCCTTCCTGCCAGTAATTGATGGCTTGGGTAAAAAGGGGAATAAGCATGAAGCTGATGAACTTGCAGAGAGAATGATGGAAATGGCATCAGAAGGTAGGATAGCAAATAAGGTTTACCGAAGTCAGAGGGATATAATTGGTGGAAAACCATATTCTTGTGGAAGTGATTGGCAGACCATAGTGAACAGAGATGATGGCAGTGGAGTCATACTGAAAACTCTAAAGAGGGTGCAGAAAGGCTGGGGTCGAGCAAATCTAACGAGTTTGCAAACCCGGAAAGATCAATTTTTTGATTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

872

Amino Acids

97.96

Weight (kDa)

8.09

Isoelectric Point (pI)

36.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	115 - 162	1e-07	PPR repeat family
PPR_1	PF12854	145 - 177	7.4e-08	PPR repeat
PPR_2	PF13041	148 - 197	7.6e-14	PPR repeat family
PPR	PF01535	151 - 181	3.2e-06	PPR repeat
TPR_24	PF23276	169 - 280	1.6e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	179 - 212	2.7e-07	PPR repeat
PPR_3	PF13812	207 - 264	1.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	218 - 247	5.3e-11	PPR repeat
PPR_2	PF13041	219 - 266	3.6e-13	PPR repeat family
PPR	PF01535	221 - 250	9.9e-09	PPR repeat
PPR_1	PF12854	250 - 281	3.2e-08	PPR repeat
PPR_1	PF12854	291 - 321	2.2e-11	PPR repeat
PPR_2	PF13041	292 - 340	7.5e-13	PPR repeat family
PPR	PF01535	295 - 324	6.7e-10	PPR repeat
PPR_2	PF13041	330 - 376	5.6e-12	PPR repeat family
PPR_long	PF17177	343 - 465	8.8e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	351 - 403	2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	358 - 390	3.3e-10	PPR repeat
PPR_2	PF13041	363 - 411	1.5e-16	PPR repeat family
PPR	PF01535	365 - 395	5.4e-07	PPR repeat
TPR_24	PF23276	385 - 491	1.6e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	386 - 442	2.8e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	394 - 425	8.9e-12	PPR repeat
PPR_2	PF13041	397 - 444	2.6e-14	PPR repeat family
PPR	PF01535	400 - 430	5.4e-07	PPR repeat
PPR_2	PF13041	433 - 481	2.4e-11	PPR repeat family
PPR_1	PF12854	464 - 495	4.9e-07	PPR repeat
PPR_1	PF12854	523 - 553	6.8e-12	PPR repeat
PPR_2	PF13041	525 - 563	4.7e-08	PPR repeat family
PPR	PF01535	528 - 557	8.5e-07	PPR repeat
PPR_3	PF13812	552 - 608	1.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	556 - 589	7.7e-09	PPR repeat
PPR_2	PF13041	560 - 606	2.6e-12	PPR repeat family
PPR_long	PF17177	578 - 676	8.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	596 - 643	5.5e-12	PPR repeat family
PPR_3	PF13812	619 - 677	8.2e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	626 - 658	2.7e-08	PPR repeat
PPR_2	PF13041	630 - 679	2.9e-17	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17140 AT2G17140
fragaria_vesca	FvH4_2g16640 FvH4_2g16640 FvH4_2g16640 FvH4_2g16640 FvH4_2g16640 FvH4_2g16640 FvH4_2g16640
malus_domestica	MD05G1134600.v1.1 MD05G1134700.v1.1 MD10G1139700.v1.1
prunus_persica	Prupe.8G178500_v2.0.a1 Prupe.8G178500_v2.0.a1
pyrus_communis	pycom05g13140 pycom10g11860
rosa_chinensis	RchiOBHm_Chr6g0280761
rosa_laevigata	RLG00000013030
rosa_multiflora	Rmu_co8435227.1_g000001 Rmu_sc0042093.1_g000001 Rmu_sc0042110.1_g000001
rosa_roxburghii	Rroxscaffold_1G00044300 Rroxscaffold_6G00391320 Rroxscaffold_6G00391330 Rroxscaffold_7G00187700
rosa_rugosa	Rorug06G0134300
rosa_samantha	Rh6AG247000 Rh6BG249100 Rh6CG250400 Rh6DG241800
rosa_wichuraiana	Rw6G021390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1800, 2217
AatII	GACGTC	1 cut(s)	393
Acc36I	ACCTGC	2 cut(s)	1316, 1421
AccB1I	GGYRCC	1 cut(s)	63
AccI	GTMKAC	1 cut(s)	452
AccIII	TCCGGA	1 cut(s)	757
AciI	CCGC	6 cut(s)	148, 196, 232, 319, 1358, 1502
AclWI	GGATC	3 cut(s)	858, 1170, 2253
AcoI	YGGCCR	1 cut(s)	2092
AcsI	RAATTY	1 cut(s)	2206
AcuI	CTGAAG	1 cut(s)	1993
AcyI	GRCGYC	1 cut(s)	390
AfaI	GTAC	6 cut(s)	557, 1068, 1210, 1711, 1900, 2192
AfiI	CCNNNNNNNGG	2 cut(s)	286, 438
AjnI	CCWGG	3 cut(s)	510, 1536, 1812
Alw26I	GTCTC	1 cut(s)	1928
AlwI	GGATC	3 cut(s)	858, 1170, 2253
Ama87I	CYCGRG	1 cut(s)	365
Aor13HI	TCCGGA	1 cut(s)	757
AoxI	GGCC	5 cut(s)	288, 440, 1041, 1534, 2092
ApeKI	GCWGC	5 cut(s)	11, 865, 1321, 1369, 1975
ApoI	RAATTY	1 cut(s)	2206
AseI	ATTAAT	1 cut(s)	981
Asp700I	GAANNNNTTC	2 cut(s)	1289, 1646
AspLEI	GCGC	2 cut(s)	78, 478
AspS9I	GGNCC	3 cut(s)	289, 441, 1042
AsuC2I	CCSGG	2 cut(s)	433, 2590
AsuHPI	GGTGA	1 cut(s)	1168
AsuII	TTCGAA	1 cut(s)	379
AvaI	CYCGRG	1 cut(s)	365
BalI	TGGCCA	1 cut(s)	2094
BanI	GGYRCC	1 cut(s)	63
BbsI	GAAGAC	1 cut(s)	1562
BbvI	GCAGC	5 cut(s)	23, 852, 1308, 1356, 1962
BccI	CCATC	9 cut(s)	146, 1153, 1424, 1439, 1654, 1852, 2330, 2386, 2504
BciT130I	CCWGG	3 cut(s)	512, 1538, 1814
BciVI	GTATCC	2 cut(s)	1217, 2291
BcnI	CCSGG	2 cut(s)	433, 2590
BcoDI	GTCTC	1 cut(s)	1928
BfaI	CTAG	2 cut(s)	825, 1964
BfmI	CTRYAG	4 cut(s)	1370, 1976, 2160, 2266
BfuAI	ACCTGC	2 cut(s)	1316, 1421
BfuI	GTATCC	2 cut(s)	1217, 2291
BisI	GCNGC	7 cut(s)	12, 319, 866, 1322, 1370, 1503, 1976
BlsI	GCNGC	7 cut(s)	13, 320, 867, 1323, 1371, 1504, 1977
BmcAI	AGTACT	2 cut(s)	1210, 2192
Bme1390I	CCNGG	5 cut(s)	433, 512, 1538, 1814, 2590
BmeT110I	CYCGRG	1 cut(s)	365
BmgT120I	GGNCC	3 cut(s)	289, 441, 1042
BmiI	GGNNCC	3 cut(s)	6, 65, 443
BmrFI	CCNGG	5 cut(s)	433, 512, 1538, 1814, 2590
BpiI	GAAGAC	1 cut(s)	1562
BpmI	CTGGAG	1 cut(s)	2160
Bpu14I	TTCGAA	1 cut(s)	379
BpuMI	CCSGG	2 cut(s)	433, 2590
BsaAI	YACGTR	1 cut(s)	1709
BsaHI	GRCGYC	1 cut(s)	390
BsaJI	CCNNGG	3 cut(s)	432, 675, 1813
BsaWI	WCCGGW	1 cut(s)	757
BsaXI	ACNNNNNCTCC	6 cut(s)	213, 243, 737, 767, 2133, 2163
Bsc4I	CCNNNNNNNGG	2 cut(s)	286, 438
Bse1I	ACTGG	2 cut(s)	1053, 2327
Bse3DI	GCAATG	2 cut(s)	1264, 2073
BseAI	TCCGGA	1 cut(s)	757
BseBI	CCWGG	3 cut(s)	512, 1538, 1814
BseDI	CCNNGG	3 cut(s)	432, 675, 1813
BseLI	CCNNNNNNNGG	2 cut(s)	286, 438
BseMI	GCAATG	2 cut(s)	1264, 2073
BseMII	CTCAG	1 cut(s)	708
BseNI	ACTGG	2 cut(s)	1053, 2327
BseRI	GAGGAG	9 cut(s)	76, 106, 109, 151, 191, 194, 327, 353, 758
BseXI	GCAGC	5 cut(s)	23, 852, 1308, 1356, 1962
BseYI	CCCAGC	3 cut(s)	593, 1619, 2556
BsgI	GTGCAG	4 cut(s)	817, 822, 1307, 2567
BshFI	GGCC	5 cut(s)	290, 442, 1043, 1536, 2094
BshNI	GGYRCC	1 cut(s)	63
BsiHKCI	CYCGRG	1 cut(s)	365
BsiSI	CCGG	3 cut(s)	432, 758, 2590
BslFI	GGGAC	3 cut(s)	292, 1356, 1868
BslI	CCNNNNNNNGG	2 cut(s)	286, 438
BsmAI	GTCTC	1 cut(s)	1928
BsmFI	GGGAC	3 cut(s)	292, 1356, 1868
BsmI	GAATGC	2 cut(s)	1788, 2271
BsnI	GGCC	5 cut(s)	290, 442, 1043, 1536, 2094
BsoBI	CYCGRG	1 cut(s)	365
Bsp119I	TTCGAA	1 cut(s)	379
Bsp13I	TCCGGA	1 cut(s)	757
Bsp143I	GATC	7 cut(s)	423, 468, 850, 1162, 1581, 2245, 2596
BspACI	CCGC	6 cut(s)	148, 196, 232, 319, 1358, 1502
BspANI	GGCC	5 cut(s)	290, 442, 1043, 1536, 2094
BspCNI	CTCAG	1 cut(s)	709
BspEI	TCCGGA	1 cut(s)	757
BspLI	GGNNCC	3 cut(s)	6, 65, 443
BspMAI	CTGCAG	2 cut(s)	1374, 1980
BspMI	ACCTGC	2 cut(s)	1316, 1421
BspPI	GGATC	3 cut(s)	858, 1170, 2253
BspT104I	TTCGAA	1 cut(s)	379
BspT107I	GGYRCC	1 cut(s)	63
BsrDI	GCAATG	2 cut(s)	1264, 2073
BsrI	ACTGG	2 cut(s)	1053, 2327
BssECI	CCNNGG	3 cut(s)	432, 675, 1813
BssMI	GATC	7 cut(s)	423, 468, 850, 1162, 1581, 2245, 2596
BssNAI	GTATAC	1 cut(s)	453
BssNI	GRCGYC	1 cut(s)	390
BssT1I	CCWWGG	1 cut(s)	675
Bst1107I	GTATAC	1 cut(s)	453
Bst2UI	CCWGG	3 cut(s)	512, 1538, 1814
Bst4CI	ACNGT	2 cut(s)	1198, 1408
Bst6I	CTCTTC	3 cut(s)	74, 381, 1965
BstACI	GRCGYC	1 cut(s)	390
BstBAI	YACGTR	1 cut(s)	1709
BstBI	TTCGAA	1 cut(s)	379
BstC8I	GCNNGC	4 cut(s)	9, 148, 508, 1255
BstDEI	CTNAG	3 cut(s)	717, 1516, 1638
BstHHI	GCGC	2 cut(s)	78, 478
BstKTI	GATC	7 cut(s)	426, 471, 853, 1165, 1584, 2248, 2599
BstMAI	GTCTC	1 cut(s)	1928
BstMBI	GATC	7 cut(s)	423, 468, 850, 1162, 1581, 2245, 2596
BstMWI	GCNNNNNNNGC	1 cut(s)	1785
BstNI	CCWGG	3 cut(s)	512, 1538, 1814
BstSCI	CCNGG	5 cut(s)	431, 510, 1536, 1812, 2588
BstSFI	CTRYAG	4 cut(s)	1370, 1976, 2160, 2266
BstSNI	TACGTA	1 cut(s)	1709
BstV1I	GCAGC	5 cut(s)	23, 852, 1308, 1356, 1962
BstV2I	GAAGAC	1 cut(s)	1562
BstX2I	RGATCY	1 cut(s)	1162
BstYI	RGATCY	1 cut(s)	1162
BstZ17I	GTATAC	1 cut(s)	453
BsuI	GTATCC	2 cut(s)	1217, 2291
BsuRI	GGCC	5 cut(s)	290, 442, 1043, 1536, 2094
BtsI	GCAGTG	2 cut(s)	805, 2521
BtsIMutI	CAGTG	3 cut(s)	805, 1692, 2521
BveI	ACCTGC	2 cut(s)	1316, 1421
Cac8I	GCNNGC	4 cut(s)	9, 148, 508, 1255
CfoI	GCGC	2 cut(s)	78, 478
Cfr13I	GGNCC	3 cut(s)	289, 441, 1042
CseI	GACGC	1 cut(s)	810
Csp6I	GTAC	6 cut(s)	556, 1067, 1209, 1710, 1899, 2191
CviAII	CATG	9 cut(s)	60, 421, 1220, 1493, 1651, 1762, 2227, 2242, 2363
CviQI	GTAC	6 cut(s)	556, 1067, 1209, 1710, 1899, 2191
DdeI	CTNAG	3 cut(s)	717, 1516, 1638
DpnI	GATC	7 cut(s)	425, 470, 852, 1164, 1583, 2247, 2598
DpnII	GATC	7 cut(s)	423, 468, 850, 1162, 1581, 2245, 2596
DraI	TTTAAA	1 cut(s)	2173
EaeI	YGGCCR	1 cut(s)	2092
Eam1104I	CTCTTC	3 cut(s)	74, 381, 1965
EarI	CTCTTC	3 cut(s)	74, 381, 1965
EciI	GGCGGA	1 cut(s)	221
Eco105I	TACGTA	1 cut(s)	1709
Eco130I	CCWWGG	1 cut(s)	675
Eco32I	GATATC	1 cut(s)	1734
Eco57I	CTGAAG	1 cut(s)	1993
Eco88I	CYCGRG	1 cut(s)	365
EcoO109I	RGGNCCY	1 cut(s)	289
EcoRII	CCWGG	3 cut(s)	510, 1536, 1812
EcoRV	GATATC	1 cut(s)	1734
EcoT14I	CCWWGG	1 cut(s)	675
EcoT22I	ATGCAT	1 cut(s)	846
ErhI	CCWWGG	1 cut(s)	675
FaeI	CATG	9 cut(s)	63, 424, 1223, 1496, 1654, 1765, 2230, 2245, 2366
FalI	AAGNNNNNCTT	4 cut(s)	1274, 1306, 2090, 2122
FaqI	GGGAC	3 cut(s)	292, 1356, 1868
FatI	CATG	9 cut(s)	59, 420, 1219, 1492, 1650, 1761, 2226, 2241, 2362
FauI	CCCGC	1 cut(s)	155
FauNDI	CATATG	2 cut(s)	846, 1001
FblI	GTMKAC	1 cut(s)	452
Fnu4HI	GCNGC	7 cut(s)	12, 319, 866, 1322, 1370, 1503, 1976
Fsp4HI	GCNGC	7 cut(s)	12, 319, 866, 1322, 1370, 1503, 1976
FspBI	CTAG	2 cut(s)	825, 1964
GlaI	GCGC	2 cut(s)	77, 477
GluI	GCNGC	7 cut(s)	12, 319, 866, 1322, 1370, 1503, 1976
GsaI	CCCAGC	3 cut(s)	597, 1623, 2560
GsuI	CTGGAG	1 cut(s)	2160
HaeIII	GGCC	5 cut(s)	290, 442, 1043, 1536, 2094
HapII	CCGG	3 cut(s)	432, 758, 2590
HgaI	GACGC	1 cut(s)	810
HhaI	GCGC	2 cut(s)	78, 478
Hin1I	GRCGYC	1 cut(s)	390
Hin1II	CATG	9 cut(s)	63, 424, 1223, 1496, 1654, 1765, 2230, 2245, 2366
Hin6I	GCGC	2 cut(s)	76, 476
HinP1I	GCGC	2 cut(s)	76, 476
HincII	GTYRAC	1 cut(s)	1543
HindII	GTYRAC	1 cut(s)	1543
HindIII	AAGCTT	1 cut(s)	2025
HpaII	CCGG	3 cut(s)	432, 758, 2590
HphI	GGTGA	1 cut(s)	1168
Hpy166II	GTNNAC	6 cut(s)	372, 453, 1488, 1543, 2431, 2500
Hpy188III	TCNNGA	9 cut(s)	466, 758, 815, 825, 1021, 1574, 1679, 1889, 1964
Hpy8I	GTNNAC	6 cut(s)	372, 453, 1488, 1543, 2431, 2500
Hpy99I	CGWCG	2 cut(s)	392, 395
HpyCH4III	ACNGT	2 cut(s)	1198, 1408
HpyCH4IV	ACGT	6 cut(s)	390, 399, 449, 618, 887, 1708
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1785
HpyF3I	CTNAG	3 cut(s)	717, 1516, 1638
HpySE526I	ACGT	6 cut(s)	390, 399, 449, 618, 887, 1708
Hsp92I	GRCGYC	1 cut(s)	390
Hsp92II	CATG	9 cut(s)	63, 424, 1223, 1496, 1654, 1765, 2230, 2245, 2366
HspAI	GCGC	2 cut(s)	76, 476
Kpn2I	TCCGGA	1 cut(s)	757
Kzo9I	GATC	7 cut(s)	423, 468, 850, 1162, 1581, 2245, 2596
LmnI	GCTCC	2 cut(s)	4, 1143
Lsp1109I	GCAGC	5 cut(s)	23, 852, 1308, 1356, 1962
MaeI	CTAG	2 cut(s)	825, 1964
MaeII	ACGT	6 cut(s)	390, 399, 449, 618, 887, 1708
MaeIII	GTNAC	5 cut(s)	530, 883, 900, 1198, 1408
MalI	GATC	7 cut(s)	425, 470, 852, 1164, 1583, 2247, 2598
MboI	GATC	7 cut(s)	423, 468, 850, 1162, 1581, 2245, 2596
MfeI	CAATTG	1 cut(s)	1464
MflI	RGATCY	1 cut(s)	1162
MlsI	TGGCCA	1 cut(s)	2094
MluNI	TGGCCA	1 cut(s)	2094
MlyI	GAGTC	6 cut(s)	377, 1483, 1890, 1950, 2229, 2529
MmeI	TCCRAC	2 cut(s)	297, 2163
Mox20I	TGGCCA	1 cut(s)	2094
Mph1103I	ATGCAT	1 cut(s)	846
MroI	TCCGGA	1 cut(s)	757
MroXI	GAANNNNTTC	2 cut(s)	1289, 1646
MscI	TGGCCA	1 cut(s)	2094
MseI	TTAA	6 cut(s)	459, 654, 981, 2022, 2081, 2172
MslI	CAYNNNNRTG	2 cut(s)	1497, 1655
Msp20I	TGGCCA	1 cut(s)	2094
MspI	CCGG	3 cut(s)	432, 758, 2590
MspR9I	CCNGG	5 cut(s)	433, 512, 1538, 1814, 2590
MunI	CAATTG	1 cut(s)	1464
Mva1269I	GAATGC	2 cut(s)	1788, 2271
MvaI	CCWGG	3 cut(s)	512, 1538, 1814
MwoI	GCNNNNNNNGC	1 cut(s)	1785
NciI	CCSGG	2 cut(s)	433, 2590
NdeI	CATATG	2 cut(s)	846, 1001
NdeII	GATC	7 cut(s)	423, 468, 850, 1162, 1581, 2245, 2596
NlaIII	CATG	9 cut(s)	63, 424, 1223, 1496, 1654, 1765, 2230, 2245, 2366
NlaIV	GGNNCC	3 cut(s)	6, 65, 443
NmuCI	GTSAC	3 cut(s)	530, 1198, 1408
NsiI	ATGCAT	1 cut(s)	846
NspV	TTCGAA	1 cut(s)	379
PaeR7I	CTCGAG	1 cut(s)	365
PcsI	WCGNNNNNNNCGW	2 cut(s)	396, 558
PctI	GAATGC	2 cut(s)	1788, 2271
PdmI	GAANNNNTTC	2 cut(s)	1289, 1646
PfeI	GAWTC	5 cut(s)	258, 568, 811, 1682, 2309
PkrI	GCNGC	7 cut(s)	13, 320, 867, 1323, 1371, 1504, 1977
PleI	GAGTC	6 cut(s)	376, 1483, 1889, 1949, 2229, 2528
PpsI	GAGTC	6 cut(s)	376, 1483, 1889, 1949, 2229, 2528
Ppu21I	YACGTR	1 cut(s)	1709
PshBI	ATTAAT	1 cut(s)	981
PsiI	TTATAA	2 cut(s)	1800, 2217
Psp6I	CCWGG	3 cut(s)	510, 1536, 1812
PspFI	CCCAGC	3 cut(s)	593, 1619, 2556
PspGI	CCWGG	3 cut(s)	510, 1536, 1812
PspN4I	GGNNCC	3 cut(s)	6, 65, 443
PspPI	GGNCC	3 cut(s)	289, 441, 1042
PspXI	VCTCGAGB	1 cut(s)	365
PstI	CTGCAG	2 cut(s)	1374, 1980
PsuI	RGATCY	1 cut(s)	1162
RsaI	GTAC	6 cut(s)	557, 1068, 1210, 1711, 1900, 2192
RsaNI	GTAC	6 cut(s)	556, 1067, 1209, 1710, 1899, 2191
RseI	CAYNNNNRTG	2 cut(s)	1497, 1655
SaqAI	TTAA	6 cut(s)	459, 654, 981, 2022, 2081, 2172
SatI	GCNGC	7 cut(s)	12, 319, 866, 1322, 1370, 1503, 1976
Sau3AI	GATC	7 cut(s)	423, 468, 850, 1162, 1581, 2245, 2596
Sau96I	GGNCC	3 cut(s)	289, 441, 1042
ScaI	AGTACT	2 cut(s)	1210, 2192
SchI	GAGTC	6 cut(s)	377, 1483, 1890, 1950, 2229, 2529
ScrFI	CCNGG	5 cut(s)	433, 512, 1538, 1814, 2590
SfcI	CTRYAG	4 cut(s)	1370, 1976, 2160, 2266
Sfr274I	CTCGAG	1 cut(s)	365
SfuI	TTCGAA	1 cut(s)	379
SlaI	CTCGAG	1 cut(s)	365
SmiMI	CAYNNNNRTG	2 cut(s)	1497, 1655
SmlI	CTYRAG	1 cut(s)	365
SmoI	CTYRAG	1 cut(s)	365
SnaBI	TACGTA	1 cut(s)	1709
SsiI	CCGC	6 cut(s)	148, 196, 232, 319, 1358, 1502
SspI	AATATT	6 cut(s)	831, 1090, 1183, 1839, 1999, 2016
SspMI	CTAG	2 cut(s)	825, 1964
StyD4I	CCNGG	5 cut(s)	431, 510, 1536, 1812, 2588
StyI	CCWWGG	1 cut(s)	675
TaaI	ACNGT	2 cut(s)	1198, 1408
TaiI	ACGT	6 cut(s)	393, 402, 452, 621, 890, 1711
TaqI	TCGA	6 cut(s)	183, 366, 379, 393, 683, 2563
TatI	WGTACW	4 cut(s)	555, 1208, 1898, 2190
TauI	GCSGC	2 cut(s)	321, 1505
TfiI	GAWTC	5 cut(s)	258, 568, 811, 1682, 2309
Tru1I	TTAA	6 cut(s)	459, 654, 981, 2022, 2081, 2172
Tru9I	TTAA	6 cut(s)	459, 654, 981, 2022, 2081, 2172
TscAI	CASTG	3 cut(s)	805, 1692, 2521
TseFI	GTSAC	3 cut(s)	530, 1198, 1408
TseI	GCWGC	5 cut(s)	11, 865, 1321, 1369, 1975
Tsp45I	GTSAC	3 cut(s)	530, 1198, 1408
TspGWI	ACGGA	1 cut(s)	1130
TspRI	CASTG	3 cut(s)	805, 1692, 2521
VspI	ATTAAT	1 cut(s)	981
XapI	RAATTY	1 cut(s)	2206
XbaI	TCTAGA	2 cut(s)	824, 1963
XhoI	CTCGAG	1 cut(s)	365
XmiI	GTMKAC	1 cut(s)	452
XmnI	GAANNNNTTC	2 cut(s)	1289, 1646
XspI	CTAG	2 cut(s)	825, 1964
ZraI	GACGTC	1 cut(s)	391
ZrmI	AGTACT	2 cut(s)	1210, 2192
Zsp2I	ATGCAT	1 cut(s)	846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.