AT2G23140

Armadillo/beta-catenin-like repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0003836
Physical Location & Seq
Reverse (-)
9845410 .. 9849379
3970 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G23140.4

Sequence Viewer

Length: 2490 bp
ATGGTGGAAATGGAAGTTCTTCTCAGAAGTATCTCGTCGTTTCTAAATCTGTCATCTTCTAAACATATTGATTTAGACCCGTTTGAGAAGTACTATAAGAGAGTTGAAGAGTTATTGAGAGTGTTGAAGCCTATAGCAGATGTTGTTGTTACCTCTGATTTTGTTTTTGATGAGAAACTTGGTAAAGCATTTGAAGAATTGACTCAGGATGTTGATCAATCCATTGATCTTTTCAGGAGTTGGCAAGCTTTCTCTAGTAAAGTCTATTTCGTTCTTCAAATTGAATCTTTGCTACCAAAGATGCGGGACACCATTGTGGATACTTTTCAGTTTCTCATGTCTTCTAAGAACCATCTACCTGATGAGCTAAGCCCAGCTTCTCTTGAGCAATGTCTAGAGAAGATTAAGCATCTTAGTTATGAAGAAATATCTTCTGTCATTGACGGTGCTTTGAGGGATCAGAGAGATGGTGTTGGACCTAGCCCTGAGATCTTGGTGAAAATTGGAGAGAACACTGGTCTTAGATCAAACCAGGAGATTCTGATTGAAGCTGTTGCTCTAGAGAGGCAGAAAGAGATGGCTGAGCAGTCTGAGAATAATGCAGAAGTCGAGTTCCTTGACCAACTGATTGTTATTGTAAACCGCATGCATGAACGTCTTCTTCTGATCAAACAGACTCAGACTTCTAGTGTCGCCATTCTTGCCGACTTCTTTTGCCCTCTGTCACTTGAAGTAATGACTGATCCAGTGATTGTGTCATCAGGACAAACATATGAAAAGGCGTTTATCAAGAGATGGATTGATTTGGGTTTAAAAGTGTGTCCCAAGACTCGACAGACCCTGACTCACACTACTCTAATACCCAATTACACCGTGAAGGCCTTAATCGCTAACTGGTGTGAGACAAACGATGTCAAGCTGCCTGATCCCAATAAATCAACAAGTTTAAATGAGCTTTCTCCTCTTTTATCATGTACAGACTCCATTCCTAGCACGGGTGCTGATGTTTCTGCTCGTAAAGTTAGCAACAAGTCACATGATTGGGATGCTTCTTCAAGTGAAACCGGTAAGCCCTCGTTCTCAAGCCGAGCAACTGAAAGAGAAGGTGCTTCTCCTTCACGTCCTGCTTCTGCCTTGGGTGCTTCTTCACCGGGTATATCTGGAAATGGTTACGGTTTGGACGCCAGGAGGGGATCACTAAATGATTTTGAAGATAGATCAAACGATTCTCGAGAACTGAGGACAGATGCACCTGGTAGGTCATCTGTATCTTCAACTACACGAGGCTCAGTAGAAAATGGACAAACATCTGAGAACCACCATCATAGGTCCCCTTCTGCTACTAGCACTGTTTCCAATGAGGAGTTTCCAAGGGCAGATGCGAATGAGAATTCAGAAGAATCAGCTCATGCTACACCTTACAGCAGTGATGCTTCAGGAGAAATTAGATCAGGGCCTCTTGCTGCAACCACTTCAGCAGCTACTCGCCGAGATTTGTCTGATTTTTCCCCAAAATTCATGGATAGACGTACCCGTGGTCAATTTTGGCGACGTCCATCAGAGAGACTCGGTTCAAGGATTGTTTCAGCGCCTTCGAATGAGACAAGACGTGATCTTTCTGAGGTCGAAACTCAAGTTAAGAAGTTGGTGGAGGAGTTGAAAAGCAGCTCATTGGATACTCAGAGACAAGCAACCGCAGAACTAAGGTTGCTAGCCAAGCACAACATGGATAATCGGATAGTCATTGGGAACTCTGGAGCAATCGTCTTATTGGTGGAACTACTTTACTCAACTGACTCAGCTACACAGGAAAACGCTGTTACCGCACTTCTCAACTTATCTATCAATGACAACAACAAAAAAGCAATTGCTGATGCTGGTGCAATTGAGCCGCTCATTCACGTGCTTGAAAATGGGAGCTCTGAAGCCAAGGAGAATTCAGCTGCTACTCTCTTCAGCCTCTCTGTAATAGAAGAAAACAAGATTAAGATTGGTCAGTCGGGTGCAATCGGGCCTCTTGTAGATCTTCTCGGTAACGGTACCCCTCGGGGTAAGAAAGACGCTGCTACTGCCTTGTTTAATCTATCGATACATCAAGAAAACAAGGCGATGATCGTGCAATCAGGTGCTGTGAGATATCTTATTGATCTGATGGACCCAGCAGCTGGGATGGTGGATAAAGCAGTTGCTGTTTTGGCAAATCTAGCTACAATTCCGGAAGGAAGAAACGCGATTGGTCAAGAAGGCGGAATCCCTCTTCTTGTTGAAGTCGTTGAGTTGGGTTCAGCTAGAGGGAAAGAAAACGCAGCAGCAGCTCTTCTTCAACTTTCAACCAACAGTGGTCGGTTCTGCAACATGGTTCTTCAAGAAGGCGCCGTTCCTCCACTCGTCGCTCTCTCACAGTCTGGTACTCCTAGAGCTAGAGAAAAGGCACAGGCGTTGCTCAGTTACTTCAGAAACCAACGGCATGGAAACGCTGGGCGTGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

829

Amino Acids

90.34

Weight (kDa)

5.42

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 2 - 135 6.2e-49 PUB2-like, N-terminal domain
U-box PF04564 234 - 300 9e-20 U-box domain
ARM_ARMC5 PF24768 541 - 678 2.9e-08 ARMC5
ARM_PUB PF25598 542 - 817 2.2e-25 Plant U-box protein ARM repeat region
Arm PF00514 574 - 611 3.6e-08 Armadillo/beta-catenin-like repeat
Arm PF00514 613 - 652 3.9e-06 Armadillo/beta-catenin-like repeat
Arm PF00514 656 - 693 1.5e-06 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 686 - 815 1.4e-06 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1555
Acc65I GGTACC 1 cut(s) 2039
AccB1I GGYRCC 2 cut(s) 2039, 2372
AccB7I CCANNNNNTGG 1 cut(s) 2165
AccBSI CCGCTC 1 cut(s) 1894
AccII CGCG 1 cut(s) 2231
AccIII TCCGGA 1 cut(s) 2215
AciI CCGC 6 cut(s) 304, 643, 1695, 1824, 1892, 2247
AclWI GGATC 4 cut(s) 465, 737, 920, 1201
AcsI RAATTY 3 cut(s) 1390, 1514, 1936
AcuI CTGAAG 5 cut(s) 1419, 1458, 1939, 1944, 2437
AcvI CACGTG 1 cut(s) 1903
AcyI GRCGYC 3 cut(s) 1182, 1552, 2373
AfaI GTAC 5 cut(s) 92, 976, 1531, 2041, 2410
AfiI CCNNNNNNNGG 2 cut(s) 995, 2165
AgeI ACCGGT 1 cut(s) 1064
AjiI CACGTC 2 cut(s) 1121, 1610
AjnI CCWGG 3 cut(s) 531, 1184, 1252
AleI CACNNNNGTG 1 cut(s) 314
Alw21I GWGCWC 1 cut(s) 1922
Alw26I GTCTC 4 cut(s) 896, 1558, 1595, 1678
AlwI GGATC 4 cut(s) 465, 737, 920, 1201
AlwNI CAGNNNCTG 4 cut(s) 841, 2129, 2165, 2189
Ama87I CYCGRG 2 cut(s) 1230, 2046
Aor13HI TCCGGA 1 cut(s) 2215
AoxI GGCC 3 cut(s) 879, 1454, 2012
ApoI RAATTY 3 cut(s) 1390, 1514, 1936
AsiGI ACCGGT 1 cut(s) 1064
Asp700I GAANNNNTTC 2 cut(s) 18, 657
Asp718I GGTACC 1 cut(s) 2039
AspLEI GCGC 2 cut(s) 1591, 2375
AspS9I GGNCC 5 cut(s) 476, 1329, 1454, 2012, 2155
AsuC2I CCSGG 1 cut(s) 1152
AsuHPI GGTGA 2 cut(s) 508, 1140
AsuII TTCGAA 1 cut(s) 1595
AsuNHI GCTAGC 1 cut(s) 1711
AvaI CYCGRG 2 cut(s) 1230, 2046
AvaII GGWCC 3 cut(s) 476, 1329, 2155
BanI GGYRCC 2 cut(s) 2039, 2372
BanII GRGCYC 1 cut(s) 1922
BauI CACGAG 1 cut(s) 1281
BbrPI CACGTG 1 cut(s) 1903
BbsI GAAGAC 2 cut(s) 333, 650
Bbv12I GWGCWC 1 cut(s) 1922
BccI CCATC 8 cut(s) 360, 461, 571, 789, 1329, 1564, 2146, 2164
BceAI ACGGC 2 cut(s) 2360, 2480
BcgI CGANNNNNNTGC 2 cut(s) 2098, 2132
BciT130I CCWGG 3 cut(s) 533, 1186, 1254
BciVI GTATCC 2 cut(s) 313, 1669
BclI TGATCA 2 cut(s) 214, 666
BcnI CCSGG 1 cut(s) 1152
BcoDI GTCTC 4 cut(s) 896, 1558, 1595, 1678
BfmI CTRYAG 1 cut(s) 132
BfoI RGCGCY 2 cut(s) 1592, 2376
BfuI GTATCC 2 cut(s) 313, 1669
BglII AGATCT 2 cut(s) 489, 2023
BlpI GCTNAGC 2 cut(s) 368, 582
BmcAI AGTACT 1 cut(s) 92
Bme1390I CCNGG 4 cut(s) 533, 1152, 1186, 1254
Bme18I GGWCC 3 cut(s) 476, 1329, 2155
BmeT110I CYCGRG 2 cut(s) 1230, 2046
BmgBI CACGTC 2 cut(s) 1121, 1610
BmgT120I GGNCC 5 cut(s) 476, 1329, 1454, 2012, 2155
BmiI GGNNCC 4 cut(s) 1331, 2041, 2157, 2374
BmrFI CCNGG 4 cut(s) 533, 1152, 1186, 1254
BmsI GCATC 7 cut(s) 291, 418, 1036, 1237, 1369, 1420, 1864
BmtI GCTAGC 1 cut(s) 1715
BpiI GAAGAC 2 cut(s) 333, 650
BpmI CTGGAG 1 cut(s) 1776
Bpu1102I GCTNAGC 2 cut(s) 368, 582
Bpu14I TTCGAA 1 cut(s) 1595
BpuEI CTTGAG 3 cut(s) 404, 1066, 1617
BpuMI CCSGG 1 cut(s) 1152
Bsa29I ATCGAT 1 cut(s) 2087
BsaAI YACGTR 1 cut(s) 1903
BsaBI GATNNNNATC 1 cut(s) 213
BsaHI GRCGYC 3 cut(s) 1182, 1552, 2373
BsaJI CCNNGG 5 cut(s) 1134, 1370, 1534, 1929, 2045
BsaWI WCCGGW 2 cut(s) 1064, 2215
BsaXI ACNNNNNCTCC 2 cut(s) 1749, 1779
Bsc4I CCNNNNNNNGG 2 cut(s) 995, 2165
Bse118I RCCGGY 1 cut(s) 1064
Bse1I ACTGG 3 cut(s) 520, 746, 899
Bse3DI GCAATG 1 cut(s) 395
Bse8I GATNNNNATC 1 cut(s) 213
BseAI TCCGGA 1 cut(s) 2215
BseBI CCWGG 3 cut(s) 533, 1186, 1254
BseCI ATCGAT 1 cut(s) 2087
BseDI CCNNGG 5 cut(s) 1134, 1370, 1534, 1929, 2045
BseGI GGATG 3 cut(s) 214, 1051, 2175
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 2 cut(s) 995, 2165
BseMI GCAATG 1 cut(s) 395
BseNI ACTGG 3 cut(s) 520, 746, 899
BseRI GAGGAG 3 cut(s) 951, 1376, 1667
BseYI CCCAGC 4 cut(s) 373, 2158, 2165, 2477
Bsh1236I CGCG 1 cut(s) 2231
BshFI GGCC 3 cut(s) 881, 1456, 2014
BshNI GGYRCC 2 cut(s) 2039, 2372
BshTI ACCGGT 1 cut(s) 1064
BshVI ATCGAT 1 cut(s) 2087
BsiHKAI GWGCWC 1 cut(s) 1922
BsiHKCI CYCGRG 2 cut(s) 1230, 2046
BsiSI CCGG 3 cut(s) 1065, 1151, 2216
BslFI GGGAC 3 cut(s) 320, 807, 1315
BslI CCNNNNNNNGG 2 cut(s) 995, 2165
BsmAI GTCTC 4 cut(s) 896, 1558, 1595, 1678
BsmFI GGGAC 3 cut(s) 320, 807, 1315
BsnI GGCC 3 cut(s) 881, 1456, 2014
BsoBI CYCGRG 2 cut(s) 1230, 2046
Bsp119I TTCGAA 1 cut(s) 1595
Bsp1286I GDGCHC 1 cut(s) 1922
Bsp13I TCCGGA 1 cut(s) 2215
Bsp1407I TGTACA 1 cut(s) 974
Bsp1720I GCTNAGC 2 cut(s) 368, 582
BspACI CCGC 6 cut(s) 304, 643, 1695, 1824, 1892, 2247
BspANI GGCC 3 cut(s) 881, 1456, 2014
BspDI ATCGAT 1 cut(s) 2087
BspEI TCCGGA 1 cut(s) 2215
BspFNI CGCG 1 cut(s) 2231
BspLI GGNNCC 4 cut(s) 1331, 2041, 2157, 2374
BspOI GCTAGC 1 cut(s) 1715
BspPI GGATC 4 cut(s) 465, 737, 920, 1201
BspQI GCTCTTC 1 cut(s) 2322
BspT104I TTCGAA 1 cut(s) 1595
BspT107I GGYRCC 2 cut(s) 2039, 2372
BsrBI CCGCTC 1 cut(s) 1894
BsrDI GCAATG 1 cut(s) 395
BsrFI RCCGGY 1 cut(s) 1064
BsrGI TGTACA 1 cut(s) 974
BsrI ACTGG 3 cut(s) 520, 746, 899
BssAI RCCGGY 1 cut(s) 1064
BssECI CCNNGG 5 cut(s) 1134, 1370, 1534, 1929, 2045
BssNI GRCGYC 3 cut(s) 1182, 1552, 2373
BssSI CACGAG 1 cut(s) 1281
BssT1I CCWWGG 3 cut(s) 1134, 1370, 1929
Bst2BI CACGAG 1 cut(s) 1281
Bst2UI CCWGG 3 cut(s) 533, 1186, 1254
Bst4CI ACNGT 7 cut(s) 446, 874, 1175, 1351, 2039, 2339, 2403
Bst6I CTCTTC 4 cut(s) 102, 1958, 2262, 2322
BstACI GRCGYC 3 cut(s) 1182, 1552, 2373
BstAUI TGTACA 1 cut(s) 974
BstBAI YACGTR 1 cut(s) 1903
BstBI TTCGAA 1 cut(s) 1595
BstC8I GCNNGC 3 cut(s) 246, 647, 1713
BstDSI CCRYGG 1 cut(s) 1534
BstF5I GGATG 3 cut(s) 214, 1051, 2175
BstFNI CGCG 1 cut(s) 2231
BstH2I RGCGCY 2 cut(s) 1592, 2376
BstHHI GCGC 2 cut(s) 1591, 2375
BstMAI GTCTC 4 cut(s) 896, 1558, 1595, 1678
BstMWI GCNNNNNNNGC 9 cut(s) 701, 887, 1139, 1717, 1823, 2069, 2195, 2204, 2312
BstNI CCWGG 3 cut(s) 533, 1186, 1254
BstNSI RCATGY 1 cut(s) 649
BstSCI CCNGG 4 cut(s) 531, 1150, 1184, 1252
BstSFI CTRYAG 1 cut(s) 132
BstUI CGCG 1 cut(s) 2231
BstV2I GAAGAC 2 cut(s) 333, 650
BstX2I RGATCY 2 cut(s) 489, 2023
BstXI CCANNNNNNTGG 1 cut(s) 2468
BstYI RGATCY 2 cut(s) 489, 2023
Bsu15I ATCGAT 1 cut(s) 2087
BsuI GTATCC 2 cut(s) 313, 1669
BsuRI GGCC 3 cut(s) 881, 1456, 2014
BsuTUI ATCGAT 1 cut(s) 2087
BtgI CCRYGG 1 cut(s) 1534
BtgZI GCGATG 1 cut(s) 2123
BtrI CACGTC 2 cut(s) 1121, 1610
BtsCI GGATG 3 cut(s) 214, 1051, 2175
BtsI GCAGTG 1 cut(s) 1432
BtsIMutI CAGTG 5 cut(s) 513, 753, 1347, 1432, 2344
Cac8I GCNNGC 3 cut(s) 246, 647, 1713
CaiI CAGNNNCTG 4 cut(s) 841, 2129, 2165, 2189
CfoI GCGC 2 cut(s) 1591, 2375
Cfr10I RCCGGY 1 cut(s) 1064
Cfr13I GGNCC 5 cut(s) 476, 1329, 1454, 2012, 2155
ClaI ATCGAT 1 cut(s) 2087
CseI GACGC 2 cut(s) 1190, 2069
CsiI ACCWGGT 1 cut(s) 1252
Csp6I GTAC 5 cut(s) 91, 975, 1530, 2040, 2409
CspAI ACCGGT 1 cut(s) 1064
CviQI GTAC 5 cut(s) 91, 975, 1530, 2040, 2409
DinI GGCGCC 1 cut(s) 2374
DraI TTTAAA 2 cut(s) 813, 948
Eam1104I CTCTTC 4 cut(s) 102, 1958, 2262, 2322
EarI CTCTTC 4 cut(s) 102, 1958, 2262, 2322
EciI GGCGGA 1 cut(s) 2262
Ecl136II GAGCTC 1 cut(s) 1920
Eco130I CCWWGG 3 cut(s) 1134, 1370, 1929
Eco147I AGGCCT 1 cut(s) 881
Eco24I GRGCYC 1 cut(s) 1922
Eco32I GATATC 1 cut(s) 2138
Eco47I GGWCC 3 cut(s) 476, 1329, 2155
Eco53kI GAGCTC 1 cut(s) 1920
Eco57I CTGAAG 5 cut(s) 1419, 1458, 1939, 1944, 2437
Eco72I CACGTG 1 cut(s) 1903
Eco88I CYCGRG 2 cut(s) 1230, 2046
EcoICRI GAGCTC 1 cut(s) 1920
EcoO109I RGGNCCY 2 cut(s) 1329, 1454
EcoRI GAATTC 2 cut(s) 1390, 1936
EcoRII CCWGG 3 cut(s) 531, 1184, 1252
EcoRV GATATC 1 cut(s) 2138
EcoT14I CCWWGG 3 cut(s) 1134, 1370, 1929
EcoT22I ATGCAT 1 cut(s) 651
EcoT38I GRGCYC 1 cut(s) 1922
EgeI GGCGCC 1 cut(s) 2374
EheI GGCGCC 1 cut(s) 2374
ErhI CCWWGG 3 cut(s) 1134, 1370, 1929
FalI AAGNNNNNCTT 2 cut(s) 361, 393
FaqI GGGAC 3 cut(s) 320, 807, 1315
FauI CCCGC 1 cut(s) 297
FauNDI CATATG 1 cut(s) 772
FbaI TGATCA 2 cut(s) 214, 666
FokI GGATG 3 cut(s) 221, 1058, 2182
FriOI GRGCYC 1 cut(s) 1922
GlaI GCGC 2 cut(s) 1590, 2374
GsaI CCCAGC 4 cut(s) 377, 2162, 2169, 2481
GsuI CTGGAG 1 cut(s) 1776
HaeII RGCGCY 2 cut(s) 1592, 2376
HaeIII GGCC 3 cut(s) 881, 1456, 2014
HapII CCGG 3 cut(s) 1065, 1151, 2216
HgaI GACGC 2 cut(s) 1190, 2069
HhaI GCGC 2 cut(s) 1591, 2375
Hin1I GRCGYC 3 cut(s) 1182, 1552, 2373
Hin6I GCGC 2 cut(s) 1589, 2373
HinP1I GCGC 2 cut(s) 1589, 2373
HindIII AAGCTT 1 cut(s) 246
HpaII CCGG 3 cut(s) 1065, 1151, 2216
HphI GGTGA 2 cut(s) 508, 1140
Hpy166II GTNNAC 1 cut(s) 640
Hpy8I GTNNAC 1 cut(s) 640
Hpy99I CGWCG 3 cut(s) 40, 1554, 2393
HpyAV CCTTC 8 cut(s) 871, 1097, 1125, 1344, 1602, 2213, 2237, 2363
HpyCH4III ACNGT 7 cut(s) 446, 874, 1175, 1351, 2039, 2339, 2403
HpyCH4IV ACGT 6 cut(s) 655, 1120, 1528, 1552, 1609, 1902
HpyCH4V TGCA 8 cut(s) 602, 649, 1250, 1466, 1883, 2006, 2119, 2352
HpyF10VI GCNNNNNNNGC 9 cut(s) 701, 887, 1139, 1717, 1823, 2069, 2195, 2204, 2312
HpySE526I ACGT 6 cut(s) 655, 1120, 1528, 1552, 1609, 1902
Hsp92I GRCGYC 3 cut(s) 1182, 1552, 2373
HspAI GCGC 2 cut(s) 1589, 2373
KasI GGCGCC 1 cut(s) 2372
Kpn2I TCCGGA 1 cut(s) 2215
KpnI GGTACC 1 cut(s) 2043
Ksp22I TGATCA 2 cut(s) 214, 666
LguI GCTCTTC 1 cut(s) 2322
LmnI GCTCC 2 cut(s) 1757, 1917
LweI GCATC 7 cut(s) 291, 418, 1036, 1237, 1369, 1420, 1864
MabI ACCWGGT 1 cut(s) 1252
MaeII ACGT 6 cut(s) 655, 1120, 1528, 1552, 1609, 1902
MaeIII GTNAC 7 cut(s) 148, 723, 1032, 1169, 1819, 2033, 2447
MbiI CCGCTC 1 cut(s) 1894
MfeI CAATTG 2 cut(s) 1866, 1884
MflI RGATCY 2 cut(s) 489, 2023
MhlI GDGCHC 1 cut(s) 1922
Mly113I GGCGCC 1 cut(s) 2373
MlyI GAGTC 7 cut(s) 196, 670, 823, 838, 974, 1560, 1790
MmeI TCCRAC 1 cut(s) 454
Mph1103I ATGCAT 1 cut(s) 651
MroI TCCGGA 1 cut(s) 2215
MroXI GAANNNNTTC 2 cut(s) 18, 657
MseI TTAA 7 cut(s) 405, 812, 884, 947, 1638, 1986, 2079
MslI CAYNNNNRTG 2 cut(s) 314, 1901
MspA1I CMGCKG 2 cut(s) 1943, 2165
MspI CCGG 3 cut(s) 1065, 1151, 2216
MspR9I CCNGG 4 cut(s) 533, 1152, 1186, 1254
MunI CAATTG 2 cut(s) 1866, 1884
MvaI CCWGG 3 cut(s) 533, 1186, 1254
MvnI CGCG 1 cut(s) 2231
MwoI GCNNNNNNNGC 9 cut(s) 701, 887, 1139, 1717, 1823, 2069, 2195, 2204, 2312
NarI GGCGCC 1 cut(s) 2373
NciI CCSGG 1 cut(s) 1152
NdeI CATATG 1 cut(s) 772
NheI GCTAGC 1 cut(s) 1711
NlaIV GGNNCC 4 cut(s) 1331, 2041, 2157, 2374
NmeAIII GCCGAG 2 cut(s) 1112, 1514
NmuCI GTSAC 2 cut(s) 723, 1032
NsiI ATGCAT 1 cut(s) 651
NspI RCATGY 1 cut(s) 649
NspV TTCGAA 1 cut(s) 1595
OliI CACNNNNGTG 1 cut(s) 314
PaeI GCATGC 1 cut(s) 649
PaeR7I CTCGAG 1 cut(s) 1230
PceI AGGCCT 1 cut(s) 881
PciSI GCTCTTC 1 cut(s) 2322
PdmI GAANNNNTTC 2 cut(s) 18, 657
PfeI GAWTC 5 cut(s) 284, 538, 1226, 1400, 2250
PflMI CCANNNNNTGG 1 cut(s) 2165
PinAI ACCGGT 1 cut(s) 1064
PleI GAGTC 7 cut(s) 196, 670, 823, 838, 974, 1560, 1790
PluTI GGCGCC 1 cut(s) 2376
PmaCI CACGTG 1 cut(s) 1903
PmlI CACGTG 1 cut(s) 1903
PpsI GAGTC 7 cut(s) 196, 670, 823, 838, 974, 1560, 1790
Ppu21I YACGTR 1 cut(s) 1903
PpuMI RGGWCCY 1 cut(s) 1329
Psp124BI GAGCTC 1 cut(s) 1922
Psp5II RGGWCCY 1 cut(s) 1329
Psp6I CCWGG 3 cut(s) 531, 1184, 1252
PspCI CACGTG 1 cut(s) 1903
PspFI CCCAGC 4 cut(s) 373, 2158, 2165, 2477
PspGI CCWGG 3 cut(s) 531, 1184, 1252
PspN4I GGNNCC 4 cut(s) 1331, 2041, 2157, 2374
PspPI GGNCC 5 cut(s) 476, 1329, 1454, 2012, 2155
PspPPI RGGWCCY 1 cut(s) 1329
PstNI CAGNNNCTG 4 cut(s) 841, 2129, 2165, 2189
PsuI RGATCY 2 cut(s) 489, 2023
PvuII CAGCTG 2 cut(s) 1943, 2165
RsaI GTAC 5 cut(s) 92, 976, 1531, 2041, 2410
RsaNI GTAC 5 cut(s) 91, 975, 1530, 2040, 2409
RseI CAYNNNNRTG 2 cut(s) 314, 1901
SacI GAGCTC 1 cut(s) 1922
SapI GCTCTTC 1 cut(s) 2322
SaqAI TTAA 7 cut(s) 405, 812, 884, 947, 1638, 1986, 2079
Sau96I GGNCC 5 cut(s) 476, 1329, 1454, 2012, 2155
ScaI AGTACT 1 cut(s) 92
SchI GAGTC 7 cut(s) 196, 670, 823, 838, 974, 1560, 1790
ScrFI CCNGG 4 cut(s) 533, 1152, 1186, 1254
SduI GDGCHC 1 cut(s) 1922
SexAI ACCWGGT 1 cut(s) 1252
SfaNI GCATC 7 cut(s) 291, 418, 1036, 1237, 1369, 1420, 1864
SfcI CTRYAG 1 cut(s) 132
SfoI GGCGCC 1 cut(s) 2374
Sfr274I CTCGAG 1 cut(s) 1230
SfuI TTCGAA 1 cut(s) 1595
SinI GGWCC 3 cut(s) 476, 1329, 2155
SlaI CTCGAG 1 cut(s) 1230
SmiMI CAYNNNNRTG 2 cut(s) 314, 1901
SmlI CTYRAG 4 cut(s) 383, 1081, 1230, 1632
SmoI CTYRAG 4 cut(s) 383, 1081, 1230, 1632
SphI GCATGC 1 cut(s) 649
SseBI AGGCCT 1 cut(s) 881
SsiI CCGC 6 cut(s) 304, 643, 1695, 1824, 1892, 2247
SspDI GGCGCC 1 cut(s) 2372
SstI GAGCTC 1 cut(s) 1922
StuI AGGCCT 1 cut(s) 881
StyD4I CCNGG 4 cut(s) 531, 1150, 1184, 1252
StyI CCWWGG 3 cut(s) 1134, 1370, 1929
TaaI ACNGT 7 cut(s) 446, 874, 1175, 1351, 2039, 2339, 2403
TaiI ACGT 6 cut(s) 658, 1123, 1531, 1555, 1612, 1905
TaqI TCGA 6 cut(s) 609, 832, 1231, 1595, 1626, 2087
TatI WGTACW 2 cut(s) 90, 974
TauI GCSGC 1 cut(s) 1894
TfiI GAWTC 5 cut(s) 284, 538, 1226, 1400, 2250
Tru1I TTAA 7 cut(s) 405, 812, 884, 947, 1638, 1986, 2079
Tru9I TTAA 7 cut(s) 405, 812, 884, 947, 1638, 1986, 2079
TscAI CASTG 5 cut(s) 520, 753, 1354, 1432, 2344
TseFI GTSAC 2 cut(s) 723, 1032
Tsp45I GTSAC 2 cut(s) 723, 1032
TspDTI ATGAA 4 cut(s) 435, 666, 789, 1507
TspRI CASTG 5 cut(s) 520, 753, 1354, 1432, 2344
Van91I CCANNNNNTGG 1 cut(s) 2165
VpaK11BI GGWCC 3 cut(s) 476, 1329, 2155
XapI RAATTY 3 cut(s) 1390, 1514, 1936
XbaI TCTAGA 2 cut(s) 394, 559
XceI RCATGY 1 cut(s) 649
XcmI CCANNNNNNNNNTGG 1 cut(s) 1723
XhoI CTCGAG 1 cut(s) 1230
XmnI GAANNNNTTC 2 cut(s) 18, 657
ZraI GACGTC 1 cut(s) 1553
ZrmI AGTACT 1 cut(s) 92
Zsp2I ATGCAT 1 cut(s) 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.