RchiOBHm_Chr2g0107211

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0003836
Physical Location & Seq
Forward (+)
18540446 .. 18547746
7301 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48124

Sequence Viewer

Length: 2505 bp
ATGGAGATAACGATGTTCAAAGCACTTCTTAATAAAATCTCCTCTTTTTTCCATTTTTCATCCCATGAGAACATAAATTTGGACCCTGTTCAGAAGTACTACAAAAAAACAGAAGAGATATTAAAATTGTTGAAGAATGTACTTGATGCCATTGTTGATTCTGAGATAGCTTCTTATGAAGTGCTTAATAAGCAATTTGAAGAACTGGGTCACTATGTTGATGAATTGAGGGAGCAATTTCAAGACTGGCAGCCATTGTTGAGTAAAGTGAATCTTGTTCTGCAAGTTGAATCATTGATATCAAAGATTTCGACTTGTAGCCTGGATGTCTTTCAGCTACTGAAGACTTCTGAGCAACATCTCCCTGATGAATTGGGTTCAGCATCTCTTGAGCCCTGCATACAGAAACTAAAGCATATGAGCTATGAGCAAACATCAACTGTCATTAAAGATGCTATAAGTGATCTAGTGGAGGGTATTGCGCCTAGCTCAGAGATCCTAGTGAAAATTGCAGAGGGCCTTAGCTTGAGGTCGAATCAGGAGATCCTTATCGAGGCTGTGGCACTCGAAAAGCTGAAGGAGAATGCTGAACAATCTGAAAAGATCGAGGAAGCAGAATATATTGAGCATATGATAGCCCTCGTCACTCGTATGCATGAGCGTCTTATTACGATAAAGCAGTCTGAAAGCTGCAGCGCAGTTCCAATACCTGCTGATTTCTGCTGTCCTCTCTCTCTGGAGCTGATGACAGATCCAGTGATTGTGGCATCAGGACAAACCTATGAGAGGACTTTCATCAAGAATTGGATTGATCTTGGCCTCACAGTTTGTCCTAAGACACGGCAGACTTTAGCTCACACCAATTTGATACCTAATTACACTGTAAAGGCACTGATTGCAAATTGGTGCGAGTCGAACAATGTGAAACTGCCTGATCCCACAAAGTCTGTGTGCTTAAATAAGCCAACACACCTCCTTGGACATGCAGAGCCTGGTGCGCCAAAGGACTTGCCTATTCTTCCTCATTCTAGGGTCAATTCATCAATGTCACCTGAGTCAACTCGATCTATGGGTTCCCCCACTAATAAATATATCTCATCTGGTGGATTGCATCGGGAAGGAAGTTCTCCATTCCATCCTCGTTCCGCATCAGAAGGTTCCTTGTCAGTAGCTGGAAATGGGCAGGTTTTGGATATCGCAAGAGTATCATCTACAAGTTCTGAAGATAGATCTGCCACTATAGACGAAAGGGGTACAGATCTAGTGAGCCAACAGTCTACATCACCATCCAGAAATGAATTTCCTATTACTACTGAAGCCAACCAGTCGTCACAAAACCATAATAGAAGTGCCTCAGCATCCAGCATACTTTCTAATACCAATGGTACTCGAGAAAATGCAGTAGATGCCGATGGGTCCTTACAGACATCAGGCAACCTGTCAGGCTACAGCAGTGATGCTTCTGGGGAGTTTAGATCAGGACCACCGGCTGCTACCCCTCAACACAGAGAAACTGAGTTGCCAACCAGATTGCCGGAGGCAAGACCTCGAAACCCAATGTGGCGCCGACCTTCTGGGAACTTAATCCCAAGGATAGTTTTGACTCCATCCACTGAAACAAGACCTGACCTTTCTGGACTAGAAGCCCAAGTTCGAACCCTGGTAGAGGACTTGAAAAGCACTTCACTTGATACTCAAAGAGAAGCAACATATGAACTCCGGATGCTTGCAAAGCATAATATGGATAATCGGATTGTTATTGCAAACTGTGGGGCCATTACCTTGTTGGTGGAATTACTCCGTTCTACAGATTCAAGGGTCCAGGAAAATTCTGTCACAGCACTTCTTAACTTGTCGATCAATGATAACAACAAAACTTTAATTGCTACTGCTAACGCAATTGAACCTCTTATTCATGTCCTTGAGACAGGGAGTGCTGAGGCCAAGGAGAACTCAGCCGCCACTCTGTTTAGCCTTTCGGTGATTGAGGATAACAAGGTTCGTATTGGAAGGTCAGGGGCTATTAGGCCTCTAGTTGATCTATTGGGGAATGGGACTCCTAGAGGGAGGAAAGATGCAGCCACGGCTTTGTTTAATTTGTCAATATTCCATGAGAACAAAGGTCGGATTGTTCAAGCTGGTGCTGTAAAGTACTTGGTGGAGTTAATGGACCCAGCTGCTGGAATGGTTGACAAGGCAGTTGCTGTTTTGGCTAATCTTTCTACAATTCCTGAAGGAAGGACGGCAATTGGTCAGGAGGGTGGGATCCCTGTTCTAGTTGAGGTGGTTGAGTTGGGTTCTGCTAGAGGGAAGGAGAATGCAGCTGCTGCTCTTTTACAGCTCTGCACAAATAGTAATAGGTATTGCAGTATGGTGCTCCAAGAAGGAGCTGTCCCGCCGTTAGTCGTATTGTCACAATCTGGCACCCCAAGGGCCAGAGAAAAGGCTCAGACACTACTTAGATACTTCAGAGACCATAGACATGGTAGTGCCGGTAGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

834

Amino Acids

91.0

Weight (kDa)

5.77

Isoelectric Point (pI)

44.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 2 - 140 1.6e-59 PUB2-like, N-terminal domain
U-box PF04564 236 - 306 5.1e-22 U-box domain
ARM_PUB PF25598 550 - 826 5.2e-29 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 551 - 723 2.1e-09 ARMC5
Arm PF00514 582 - 619 2.9e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 664 - 701 2.2e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 718, 1174
AccB1I GGYRCC 2 cut(s) 1563, 2423
AccB7I CCANNNNNTGG 1 cut(s) 2180
AccI GTMKAC 1 cut(s) 1277
AccIII TCCGGA 1 cut(s) 1719
AciI CCGC 3 cut(s) 1146, 1959, 2396
AclWI GGATC 6 cut(s) 490, 538, 746, 929, 2260, 2273
AcsI RAATTY 3 cut(s) 76, 1298, 1828
AcuI CTGAAG 6 cut(s) 362, 596, 1242, 1335, 2253, 2452
AcyI GRCGYC 1 cut(s) 1564
AfaI GTAC 5 cut(s) 98, 141, 1255, 1387, 2153
AfiI CCNNNNNNNGG 4 cut(s) 553, 786, 1666, 2180
AgsI TTSAA 9 cut(s) 19, 133, 200, 242, 290, 1675, 1815, 1904, 2135
AjnI CCWGG 4 cut(s) 321, 991, 1659, 1821
AjuI GAANNNNNNNTTGG 2 cut(s) 62, 94
Alw21I GWGCWC 1 cut(s) 2379
Alw26I GTCTC 2 cut(s) 1919, 2466
AlwI GGATC 6 cut(s) 490, 538, 746, 929, 2260, 2273
AlwNI CAGNNNCTG 6 cut(s) 340, 992, 1172, 2180, 2204, 2327
Ama87I CYCGRG 1 cut(s) 1389
Aor13HI TCCGGA 1 cut(s) 1719
AoxI GGCC 6 cut(s) 517, 817, 1773, 1941, 2027, 2433
ApeKI GCWGC 9 cut(s) 250, 690, 693, 1490, 2078, 2177, 2321, 2324, 2327
ApoI RAATTY 3 cut(s) 76, 1298, 1828
AspLEI GCGC 4 cut(s) 484, 698, 1000, 1566
AspS9I GGNCC 8 cut(s) 82, 517, 1416, 1481, 1773, 1819, 2170, 2433
AsuHPI GGTGA 3 cut(s) 1041, 1275, 1993
AsuII TTCGAA 1 cut(s) 1654
AvaI CYCGRG 1 cut(s) 1389
AvaII GGWCC 5 cut(s) 82, 1416, 1481, 1819, 2170
BamHI GGATCC 1 cut(s) 2265
BanI GGYRCC 2 cut(s) 1563, 2423
BanII GRGCYC 1 cut(s) 396
BbsI GAAGAC 1 cut(s) 350
Bbv12I GWGCWC 1 cut(s) 2379
BbvCI CCTCAGC 2 cut(s) 1354, 1938
BbvI GCAGC 9 cut(s) 262, 677, 705, 1477, 2090, 2164, 2311, 2314, 2333
BccI CCATC 4 cut(s) 1143, 1294, 1406, 1615
BceAI ACGGC 4 cut(s) 857, 2100, 2259, 2383
BciT130I CCWGG 4 cut(s) 323, 993, 1661, 1823
BcoDI GTCTC 2 cut(s) 1919, 2466
BfmI CTRYAG 4 cut(s) 691, 1239, 1447, 1806
BfoI RGCGCY 1 cut(s) 1567
BfuAI ACCTGC 2 cut(s) 718, 1174
BglII AGATCT 2 cut(s) 1229, 1258
BmcAI AGTACT 2 cut(s) 98, 2153
Bme1390I CCNGG 4 cut(s) 323, 993, 1661, 1823
Bme18I GGWCC 5 cut(s) 82, 1416, 1481, 1819, 2170
BmeT110I CYCGRG 1 cut(s) 1389
BmgT120I GGNCC 8 cut(s) 82, 517, 1416, 1481, 1773, 1819, 2170, 2433
BmrFI CCNGG 4 cut(s) 323, 993, 1661, 1823
BmrI ACTGGG 1 cut(s) 215
BmuI ACTGGG 1 cut(s) 215
BpiI GAAGAC 1 cut(s) 350
BpmI CTGGAG 1 cut(s) 758
Bpu10I CCTNAGC 3 cut(s) 521, 1354, 1938
Bpu14I TTCGAA 1 cut(s) 1654
BpuEI CTTGAG 3 cut(s) 410, 547, 1943
BsaBI GATNNNNATC 1 cut(s) 548
BsaHI GRCGYC 1 cut(s) 1564
BsaI GGTCTC 1 cut(s) 2466
BsaJI CCNNGG 6 cut(s) 976, 1589, 1659, 1944, 2082, 2429
BsaWI WCCGGW 1 cut(s) 1719
Bsc4I CCNNNNNNNGG 4 cut(s) 553, 786, 1666, 2180
Bse118I RCCGGY 2 cut(s) 1486, 2492
Bse1I ACTGG 4 cut(s) 210, 251, 755, 1324
Bse8I GATNNNNATC 1 cut(s) 548
BseAI TCCGGA 1 cut(s) 1719
BseBI CCWGG 4 cut(s) 323, 993, 1661, 1823
BseDI CCNNGG 6 cut(s) 976, 1589, 1659, 1944, 2082, 2429
BseGI GGATG 7 cut(s) 59, 331, 1135, 1286, 1358, 1607, 1728
BseJI GATNNNNATC 1 cut(s) 548
BseLI CCNNNNNNNGG 4 cut(s) 553, 786, 1666, 2180
BseMII CTCAG 9 cut(s) 153, 342, 504, 1044, 1368, 1506, 1929, 1968, 2462
BseNI ACTGG 4 cut(s) 210, 251, 755, 1324
BseRI GAGGAG 1 cut(s) 31
BseXI GCAGC 9 cut(s) 262, 677, 705, 1477, 2090, 2164, 2311, 2314, 2333
BseYI CCCAGC 1 cut(s) 2173
BsgI GTGCAG 1 cut(s) 2329
BshFI GGCC 6 cut(s) 519, 819, 1775, 1943, 2029, 2435
BshNI GGYRCC 2 cut(s) 1563, 2423
BsiHKAI GWGCWC 1 cut(s) 2379
BsiHKCI CYCGRG 1 cut(s) 1389
BsiSI CCGG 4 cut(s) 1487, 1535, 1720, 2493
BslFI GGGAC 2 cut(s) 2068, 2378
BslI CCNNNNNNNGG 4 cut(s) 553, 786, 1666, 2180
BsmAI GTCTC 2 cut(s) 1919, 2466
BsmFI GGGAC 2 cut(s) 2068, 2378
BsmI GAATGC 2 cut(s) 589, 2323
BsnI GGCC 6 cut(s) 519, 819, 1775, 1943, 2029, 2435
Bso31I GGTCTC 1 cut(s) 2466
BsoBI CYCGRG 1 cut(s) 1389
Bsp119I TTCGAA 1 cut(s) 1654
Bsp1286I GDGCHC 2 cut(s) 396, 2379
Bsp13I TCCGGA 1 cut(s) 1719
BspACI CCGC 3 cut(s) 1146, 1959, 2396
BspANI GGCC 6 cut(s) 519, 819, 1775, 1943, 2029, 2435
BspCNI CTCAG 9 cut(s) 154, 343, 503, 1045, 1367, 1507, 1930, 1967, 2461
BspEI TCCGGA 1 cut(s) 1719
BspMAI CTGCAG 1 cut(s) 695
BspMI ACCTGC 2 cut(s) 718, 1174
BspPI GGATC 6 cut(s) 490, 538, 746, 929, 2260, 2273
BspT104I TTCGAA 1 cut(s) 1654
BspT107I GGYRCC 2 cut(s) 1563, 2423
BspTNI GGTCTC 1 cut(s) 2466
BsrFI RCCGGY 2 cut(s) 1486, 2492
BsrI ACTGG 4 cut(s) 210, 251, 755, 1324
BssAI RCCGGY 2 cut(s) 1486, 2492
BssECI CCNNGG 6 cut(s) 976, 1589, 1659, 1944, 2082, 2429
BssNI GRCGYC 1 cut(s) 1564
BssT1I CCWWGG 4 cut(s) 976, 1589, 1944, 2429
Bst2UI CCWGG 4 cut(s) 323, 993, 1661, 1823
Bst4CI ACNGT 5 cut(s) 442, 826, 883, 1275, 1769
Bst6I CTCTTC 1 cut(s) 108
BstACI GRCGYC 1 cut(s) 1564
BstAPI GCANNNNNTGC 3 cut(s) 896, 1406, 2327
BstBI TTCGAA 1 cut(s) 1654
BstC8I GCNNGC 1 cut(s) 1728
BstDSI CCRYGG 1 cut(s) 2082
BstENI CCTNNNNNAGG 3 cut(s) 551, 784, 1664
BstF5I GGATG 7 cut(s) 59, 331, 1135, 1286, 1358, 1607, 1728
BstH2I RGCGCY 1 cut(s) 1567
BstHHI GCGC 4 cut(s) 484, 698, 1000, 1566
BstMAI GTCTC 2 cut(s) 1919, 2466
BstMWI GCNNNNNNNGC 8 cut(s) 190, 896, 997, 1406, 1732, 2084, 2210, 2327
BstNI CCWGG 4 cut(s) 323, 993, 1661, 1823
BstNSI RCATGY 1 cut(s) 986
BstSCI CCNGG 4 cut(s) 321, 991, 1659, 1821
BstSFI CTRYAG 4 cut(s) 691, 1239, 1447, 1806
BstV1I GCAGC 9 cut(s) 262, 677, 705, 1477, 2090, 2164, 2311, 2314, 2333
BstV2I GAAGAC 1 cut(s) 350
BstX2I RGATCY 6 cut(s) 495, 543, 751, 1229, 1258, 2265
BstXI CCANNNNNNTGG 1 cut(s) 2483
BstYI RGATCY 6 cut(s) 495, 543, 751, 1229, 1258, 2265
BsuRI GGCC 6 cut(s) 519, 819, 1775, 1943, 2029, 2435
BtgI CCRYGG 1 cut(s) 2082
BtsCI GGATG 7 cut(s) 59, 331, 1135, 1286, 1358, 1607, 1728
BtsI GCAGTG 1 cut(s) 1459
BtsIMutI CAGTG 5 cut(s) 762, 879, 890, 1459, 1611
BveI ACCTGC 2 cut(s) 718, 1174
Cac8I GCNNGC 1 cut(s) 1728
CaiI CAGNNNCTG 6 cut(s) 340, 992, 1172, 2180, 2204, 2327
CfoI GCGC 4 cut(s) 484, 698, 1000, 1566
Cfr10I RCCGGY 2 cut(s) 1486, 2492
Cfr13I GGNCC 8 cut(s) 82, 517, 1416, 1481, 1773, 1819, 2170, 2433
CseI GACGC 1 cut(s) 650
Csp6I GTAC 5 cut(s) 97, 140, 1254, 1386, 2152
CviAII CATG 6 cut(s) 65, 656, 983, 1916, 2111, 2483
CviQI GTAC 5 cut(s) 97, 140, 1254, 1386, 2152
DinI GGCGCC 1 cut(s) 1565
Eam1104I CTCTTC 1 cut(s) 108
EarI CTCTTC 1 cut(s) 108
Eco130I CCWWGG 4 cut(s) 976, 1589, 1944, 2429
Eco147I AGGCCT 1 cut(s) 2029
Eco24I GRGCYC 1 cut(s) 396
Eco31I GGTCTC 1 cut(s) 2466
Eco32I GATATC 2 cut(s) 300, 1195
Eco47I GGWCC 5 cut(s) 82, 1416, 1481, 1819, 2170
Eco57I CTGAAG 6 cut(s) 362, 596, 1242, 1335, 2253, 2452
Eco88I CYCGRG 1 cut(s) 1389
EcoNI CCTNNNNNAGG 3 cut(s) 551, 784, 1664
EcoO109I RGGNCCY 2 cut(s) 517, 1416
EcoRII CCWGG 4 cut(s) 321, 991, 1659, 1821
EcoRV GATATC 2 cut(s) 300, 1195
EcoT14I CCWWGG 4 cut(s) 976, 1589, 1944, 2429
EcoT22I ATGCAT 1 cut(s) 657
EcoT38I GRGCYC 1 cut(s) 396
EgeI GGCGCC 1 cut(s) 1565
EheI GGCGCC 1 cut(s) 1565
ErhI CCWWGG 4 cut(s) 976, 1589, 1944, 2429
FaeI CATG 6 cut(s) 68, 659, 986, 1919, 2114, 2486
FalI AAGNNNNNCTT 4 cut(s) 12, 44, 258, 290
FaqI GGGAC 2 cut(s) 2068, 2378
FatI CATG 6 cut(s) 64, 655, 982, 1915, 2110, 2482
FauI CCCGC 1 cut(s) 2403
FauNDI CATATG 3 cut(s) 417, 630, 1711
FblI GTMKAC 1 cut(s) 1277
FokI GGATG 7 cut(s) 46, 338, 1122, 1273, 1345, 1594, 1735
FriOI GRGCYC 1 cut(s) 396
GlaI GCGC 4 cut(s) 483, 697, 999, 1565
GsaI CCCAGC 1 cut(s) 2177
GsuI CTGGAG 1 cut(s) 758
HaeII RGCGCY 1 cut(s) 1567
HaeIII GGCC 6 cut(s) 519, 819, 1775, 1943, 2029, 2435
HapII CCGG 4 cut(s) 1487, 1535, 1720, 2493
HgaI GACGC 1 cut(s) 650
HhaI GCGC 4 cut(s) 484, 698, 1000, 1566
Hin1I GRCGYC 1 cut(s) 1564
Hin1II CATG 6 cut(s) 68, 659, 986, 1919, 2114, 2486
Hin6I GCGC 4 cut(s) 482, 696, 998, 1564
HinP1I GCGC 4 cut(s) 482, 696, 998, 1564
HincII GTYRAC 2 cut(s) 1059, 2191
HindII GTYRAC 2 cut(s) 1059, 2191
HinfI GANTC 9 cut(s) 158, 271, 290, 535, 911, 1055, 1603, 1811, 2056
HpaII CCGG 4 cut(s) 1487, 1535, 1720, 2493
HphI GGTGA 3 cut(s) 1041, 1275, 1993
Hpy166II GTNNAC 3 cut(s) 1059, 1278, 2191
Hpy8I GTNNAC 3 cut(s) 1059, 1278, 2191
HpyAV CCTTC 9 cut(s) 571, 1112, 1148, 1581, 2004, 2228, 2232, 2305, 2378
HpyCH4III ACNGT 5 cut(s) 442, 826, 883, 1275, 1769
HpyF10VI GCNNNNNNNGC 8 cut(s) 190, 896, 997, 1406, 1732, 2084, 2210, 2327
Hsp92I GRCGYC 1 cut(s) 1564
Hsp92II CATG 6 cut(s) 68, 659, 986, 1919, 2114, 2486
HspAI GCGC 4 cut(s) 482, 696, 998, 1564
KasI GGCGCC 1 cut(s) 1563
Kpn2I TCCGGA 1 cut(s) 1719
LmnI GCTCC 4 cut(s) 232, 739, 2382, 2387
Lsp1109I GCAGC 9 cut(s) 262, 677, 705, 1477, 2090, 2164, 2311, 2314, 2333
MaeIII GTNAC 6 cut(s) 209, 643, 1047, 1329, 1834, 2412
MboII GAAGA 6 cut(s) 125, 145, 212, 355, 1010, 1235
MfeI CAATTG 2 cut(s) 1899, 2247
MflI RGATCY 6 cut(s) 495, 543, 751, 1229, 1258, 2265
MhlI GDGCHC 2 cut(s) 396, 2379
Mly113I GGCGCC 1 cut(s) 1564
MlyI GAGTC 4 cut(s) 920, 1064, 1597, 2050
MmeI TCCRAC 1 cut(s) 2105
Mph1103I ATGCAT 1 cut(s) 657
MroI TCCGGA 1 cut(s) 1719
MslI CAYNNNNRTG 3 cut(s) 650, 2481, 2487
MspA1I CMGCKG 2 cut(s) 2177, 2324
MspI CCGG 4 cut(s) 1487, 1535, 1720, 2493
MspR9I CCNGG 4 cut(s) 323, 993, 1661, 1823
MunI CAATTG 2 cut(s) 1899, 2247
Mva1269I GAATGC 2 cut(s) 589, 2323
MvaI CCWGG 4 cut(s) 323, 993, 1661, 1823
MwoI GCNNNNNNNGC 8 cut(s) 190, 896, 997, 1406, 1732, 2084, 2210, 2327
NarI GGCGCC 1 cut(s) 1564
NdeI CATATG 3 cut(s) 417, 630, 1711
NlaIII CATG 6 cut(s) 68, 659, 986, 1919, 2114, 2486
NmuCI GTSAC 6 cut(s) 209, 643, 1047, 1329, 1834, 2412
NsiI ATGCAT 1 cut(s) 657
NspI RCATGY 1 cut(s) 986
NspV TTCGAA 1 cut(s) 1654
PaeR7I CTCGAG 1 cut(s) 1389
PceI AGGCCT 1 cut(s) 2029
PctI GAATGC 2 cut(s) 589, 2323
PfeI GAWTC 5 cut(s) 158, 271, 290, 535, 1811
PflMI CCANNNNNTGG 1 cut(s) 2180
PfoI TCCNGGA 1 cut(s) 1821
PleI GAGTC 4 cut(s) 919, 1063, 1597, 2050
PluTI GGCGCC 1 cut(s) 1567
PpsI GAGTC 4 cut(s) 919, 1063, 1597, 2050
PpuMI RGGWCCY 1 cut(s) 1416
Psp5II RGGWCCY 1 cut(s) 1416
Psp6I CCWGG 4 cut(s) 321, 991, 1659, 1821
PspFI CCCAGC 1 cut(s) 2173
PspGI CCWGG 4 cut(s) 321, 991, 1659, 1821
PspPI GGNCC 8 cut(s) 82, 517, 1416, 1481, 1773, 1819, 2170, 2433
PspPPI RGGWCCY 1 cut(s) 1416
PstI CTGCAG 1 cut(s) 695
PstNI CAGNNNCTG 6 cut(s) 340, 992, 1172, 2180, 2204, 2327
PsuI RGATCY 6 cut(s) 495, 543, 751, 1229, 1258, 2265
PvuII CAGCTG 2 cut(s) 2177, 2324
RsaI GTAC 5 cut(s) 98, 141, 1255, 1387, 2153
RsaNI GTAC 5 cut(s) 97, 140, 1254, 1386, 2152
RseI CAYNNNNRTG 3 cut(s) 650, 2481, 2487
Sau96I GGNCC 8 cut(s) 82, 517, 1416, 1481, 1773, 1819, 2170, 2433
ScaI AGTACT 2 cut(s) 98, 2153
SchI GAGTC 4 cut(s) 920, 1064, 1597, 2050
ScrFI CCNGG 4 cut(s) 323, 993, 1661, 1823
SduI GDGCHC 2 cut(s) 396, 2379
SfcI CTRYAG 4 cut(s) 691, 1239, 1447, 1806
SfoI GGCGCC 1 cut(s) 1565
Sfr274I CTCGAG 1 cut(s) 1389
SfuI TTCGAA 1 cut(s) 1654
SinI GGWCC 5 cut(s) 82, 1416, 1481, 1819, 2170
SlaI CTCGAG 1 cut(s) 1389
SmiMI CAYNNNNRTG 3 cut(s) 650, 2481, 2487
SmlI CTYRAG 4 cut(s) 389, 526, 1389, 1922
SmoI CTYRAG 4 cut(s) 389, 526, 1389, 1922
SseBI AGGCCT 1 cut(s) 2029
SsiI CCGC 3 cut(s) 1146, 1959, 2396
SspDI GGCGCC 1 cut(s) 1563
SspI AATATT 1 cut(s) 2106
StuI AGGCCT 1 cut(s) 2029
StyD4I CCNGG 4 cut(s) 321, 991, 1659, 1821
StyI CCWWGG 4 cut(s) 976, 1589, 1944, 2429
TaaI ACNGT 5 cut(s) 442, 826, 883, 1275, 1769
TatI WGTACW 3 cut(s) 96, 139, 2151
TauI GCSGC 1 cut(s) 1961
TfiI GAWTC 5 cut(s) 158, 271, 290, 535, 1811
TscAI CASTG 5 cut(s) 762, 886, 897, 1459, 1618
TseFI GTSAC 6 cut(s) 209, 643, 1047, 1329, 1834, 2412
TseI GCWGC 9 cut(s) 250, 690, 693, 1490, 2078, 2177, 2321, 2324, 2327
Tsp45I GTSAC 6 cut(s) 209, 643, 1047, 1329, 1834, 2412
TspDTI ATGAA 9 cut(s) 48, 192, 237, 384, 784, 1029, 1311, 1728, 1904
TspGWI ACGGA 1 cut(s) 1790
TspRI CASTG 5 cut(s) 762, 886, 897, 1459, 1618
Van91I CCANNNNNTGG 1 cut(s) 2180
VpaK11BI GGWCC 5 cut(s) 82, 1416, 1481, 1819, 2170
XagI CCTNNNNNAGG 3 cut(s) 551, 784, 1664
XapI RAATTY 3 cut(s) 76, 1298, 1828
XceI RCATGY 1 cut(s) 986
XcmI CCANNNNNNNNNTGG 1 cut(s) 1783
XhoI CTCGAG 1 cut(s) 1389
XmiI GTMKAC 1 cut(s) 1277
ZrmI AGTACT 2 cut(s) 98, 2153
Zsp2I ATGCAT 1 cut(s) 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.