RLG00000017560

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0003836
Physical Location & Seq
Forward (+)
18279612 .. 18283456
3845 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017560

Sequence Viewer

Length: 2493 bp
ATGTTCAAAGCACTTCTTAATAAAATCTCCTCTTTTTTCCATTTTTCATCCCATGAGAACATAAATTTGGACCCTGTTCAGAAGTACTACAACAAAACAGAAGAGATATTAAAATTGTTGAAGAATGTACTTGATGCCATTGTTGATTCTGAGATAGCTTCATATGAAGTGCTTAATAAGCCATTTGAAGAACTGGGTCACTATCTTGATGAATTGAGGGAGCAATTTCAAGACTGGCAGCCATTGTTGAGTAAAGTGAATCTTGTTCTGCAAGTTGAATCATTGATATCAAAGATTTCGACTTGTAGCCTGGATGTCTTTCAGCTGCTGAAGACTTCTGAGCACCATCTCCCTGACGAATTGGGTTCAGCATCTCTTGAGCTCTGCATACAGAAACTAAAGCATATGAGCTATGGGCAAACATCAACTGTCATTAAAGATGCTATAAGTGATCTAGTGGAGGGTACTGCGCCTAGCTCAGAGATCCTAGTGAAAATTGCAGAGGGCCTTAGCCTGAGGTCGAATCAGGAGATCCTTATCGAGGCTGTGGCACTCGAAAAGCTGAAGGAGAATGCTGAACAATCTGAAAAGATCGAGGAAGCAGAATATATTGAGCATATGATAGCCCTTGTCACTCGCATGCATGAGCGTCTTATTACGATAAAGCAGTCTGAAAGCTGCAGTGCAGTTCCAATACCTGCTGATTTCTGCTGTCCTCTCTCTCTGGAGCTGATGACAGATCCAGTGATTGTGGCATCAGGACAAACCTATGAGAGGACTTTCATCAAGAATTGGATTGATCTTGACCTCACAGTTTGTCCTAAGACACGGCAGACTTTAGCTCACACCAATTTGATACCTAATTACACTGTAAAGGCACTGATTGCAAATTGGTGCGAGTCAAACAATGTGAAACTGCCTGATCCCACAAAGTCTGTGTGCTTAAATAAGCCAACACACCTTCTTGGACATGCAGAGCCTGGTGCACCAAAGGACTCTCCTATTCTTCCGCATTCTAGGGTCAATTCATCAATGTCACCTGAGTCAACTCGATCTATGGGTTCCCCCACTAGTAATTATATCTCATCTGGTGGATTGCATCGGGAAGGAAGTTCTCCATTCCATCCTCGTTCCGCATCAGAAGGCTCCTTGTCAGTAGCTGGAAATGGGCAGGTTTTGGATATCGCAAGAGTATCATCTACAAGTTCTGAAGACAGATCTGCCACTATAGACGAAAGGGGTACAGATCTAGTGAGCCAACAGTCTACATCACCATCCAGAAATGAATTTCCTATTACTACTGAAGCCAACCAGTCGTCGCAAAGCCATAATAGAAGTGCCTCAGCATCCAGCATACTTTCTAATACCAATGGTACTCGAGAAAATGCAGTAGCTGCCGATGGGTCCTTACAGATGTCAGGCAACCTGTCAGGCTACAGCAGTGATGCTTCTGCGGAGTTTAAATCAGGACCACCGGCTGCTACCCCTCAACACAGAGAAACTGAGTTGCCAATCAGATTACCGGAGGCAAGACCTCGAAACCCAATGTGGCGCCGACCTTCTGGGAACTTAATCCCAAGGATAGTTTTGACTCCATCCATTGAAACAAGACCTGACCTTTCTGGACTAGAAGCCCAAGTTCGAACTCAGGTAGAGGACTTGAAAAGCACTTCACTTGATACTCAAAGAGAAGCAACATATGAACTCCGGATGCTTGCAAAGCATAATATGGATAATCGGATTGTTATTGCAAACTGTGGGGCCATTACCTTGTTGGTGGAATTGCTCCGTTCTACAGATTCAAGGGTCCAGGAAAATTCTGTCACAGCACTTCTTAACTTGTCGATCAATGATAACAACAAAACTTTAATTGCTACTGCTAACGCAATTGAACCTCTTATTCATGTCCTTGAGACAGGGAGTGCCGAGGCCAAGGAGAACTCAGCCGCCACTCTGTTTAGCCTTTCAGTGATTGAGGATAACAAGGTTCGTATTGGAAGGTCAGGGGCTATTAGGCCTCTAGTTGATCTATTGGGGAATGGGACTCCTAGAGGGAGGAAAGATGCAGCCACGGCTTTGTTTAATTTGTCAATATTCCATGAGAACAAAGGTCGGATTGTTCAAGCTGGTGCTGTAAAGTACTTGGTGGAGTTAATGGACCCAGCTGCTGGAATGGTTGACAAGGCAGTTGCTGTTTTGGCTAATCTTTCTACAATTCCTGAAGGAAGGACGGCAATTGGTCAGGAGGGTGGGATCCCTGTTCTAGTTGAGGTAGTTGAGTTGGGTTCTGCTAGAGGGAAGGAGAATGCAGCTGCTGCTCTTTTACAGCTCTGCACAAATAGTAATAGGTATTGCAGTATGGTGCTCCAAGAAGGAGCTGTCCCGCCGTTAGTCGTATTGTCACAATCTGGCACCCCAAGGGCCAGAGAAAAGGCTCAGACACTACTTAGATTCTTCAGAGACCATAGACATGGTAGTGCCGGTAGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

831

Amino Acids

90.4

Weight (kDa)

5.8

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 2 - 136 1e-56 PUB2-like, N-terminal domain
U-box PF04564 232 - 302 5.7e-22 U-box domain
ARM_PUB PF25598 547 - 822 9.8e-29 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 556 - 719 8.9e-09 ARMC5
Arm PF00514 578 - 615 2.9e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 660 - 697 2.2e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 706, 1162
AccB1I GGYRCC 2 cut(s) 1551, 2411
AccB7I CCANNNNNTGG 1 cut(s) 2168
AccI GTMKAC 1 cut(s) 1265
AccIII TCCGGA 1 cut(s) 1707
AciI CCGC 5 cut(s) 1010, 1134, 1454, 1947, 2384
AclWI GGATC 6 cut(s) 478, 526, 734, 917, 2248, 2261
AcsI RAATTY 3 cut(s) 64, 1286, 1816
AcuI CTGAAG 6 cut(s) 350, 584, 1230, 1323, 2241, 2440
AcyI GRCGYC 1 cut(s) 1552
AfaI GTAC 6 cut(s) 86, 129, 466, 1243, 1375, 2141
AfiI CCNNNNNNNGG 3 cut(s) 541, 774, 2168
AhlI ACTAGT 1 cut(s) 1070
AjnI CCWGG 3 cut(s) 309, 979, 1809
AjuI GAANNNNNNNTTGG 2 cut(s) 50, 82
Alw21I GWGCWC 4 cut(s) 345, 384, 988, 2367
Alw26I GTCTC 2 cut(s) 1907, 2454
Alw44I GTGCAC 1 cut(s) 984
AlwI GGATC 6 cut(s) 478, 526, 734, 917, 2248, 2261
AlwNI CAGNNNCTG 7 cut(s) 328, 980, 1160, 1394, 2168, 2192, 2315
Ama87I CYCGRG 1 cut(s) 1377
Aor13HI TCCGGA 1 cut(s) 1707
AoxI GGCC 5 cut(s) 505, 1761, 1929, 2015, 2421
ApaLI GTGCAC 1 cut(s) 984
ApoI RAATTY 3 cut(s) 64, 1286, 1816
AspLEI GCGC 2 cut(s) 472, 1554
AspS9I GGNCC 8 cut(s) 70, 505, 1404, 1469, 1761, 1807, 2158, 2421
AsuHPI GGTGA 2 cut(s) 1029, 1263
AsuII TTCGAA 1 cut(s) 1642
AvaI CYCGRG 1 cut(s) 1377
AvaII GGWCC 5 cut(s) 70, 1404, 1469, 1807, 2158
AxyI CCTNAGG 1 cut(s) 515
BaeGI GKGCMC 1 cut(s) 988
BamHI GGATCC 1 cut(s) 2253
BanI GGYRCC 2 cut(s) 1551, 2411
BanII GRGCYC 1 cut(s) 384
BbsI GAAGAC 2 cut(s) 338, 1218
Bbv12I GWGCWC 4 cut(s) 345, 384, 988, 2367
BbvCI CCTCAGC 1 cut(s) 1342
BccI CCATC 5 cut(s) 354, 1131, 1282, 1394, 1603
BceAI ACGGC 4 cut(s) 845, 2088, 2247, 2371
BciT130I CCWGG 3 cut(s) 311, 981, 1811
BcoDI GTCTC 2 cut(s) 1907, 2454
BcuI ACTAGT 1 cut(s) 1070
BfmI CTRYAG 4 cut(s) 679, 1227, 1435, 1794
BfoI RGCGCY 1 cut(s) 1555
BfuAI ACCTGC 2 cut(s) 706, 1162
BglII AGATCT 2 cut(s) 1217, 1246
BmcAI AGTACT 2 cut(s) 86, 2141
Bme1390I CCNGG 3 cut(s) 311, 981, 1811
Bme18I GGWCC 5 cut(s) 70, 1404, 1469, 1807, 2158
BmeT110I CYCGRG 1 cut(s) 1377
BmgT120I GGNCC 8 cut(s) 70, 505, 1404, 1469, 1761, 1807, 2158, 2421
BmrFI CCNGG 3 cut(s) 311, 981, 1811
BmrI ACTGGG 1 cut(s) 203
BmuI ACTGGG 1 cut(s) 203
BpiI GAAGAC 2 cut(s) 338, 1218
BpmI CTGGAG 1 cut(s) 746
Bpu10I CCTNAGC 2 cut(s) 509, 1342
Bpu14I TTCGAA 1 cut(s) 1642
BpuEI CTTGAG 2 cut(s) 398, 1931
BsaBI GATNNNNATC 1 cut(s) 536
BsaHI GRCGYC 1 cut(s) 1552
BsaI GGTCTC 1 cut(s) 2454
BsaJI CCNNGG 5 cut(s) 1577, 1926, 1932, 2070, 2417
BsaWI WCCGGW 2 cut(s) 1522, 1707
Bsc4I CCNNNNNNNGG 3 cut(s) 541, 774, 2168
Bse118I RCCGGY 2 cut(s) 1474, 2480
Bse1I ACTGG 4 cut(s) 198, 239, 743, 1312
Bse21I CCTNAGG 1 cut(s) 515
Bse8I GATNNNNATC 1 cut(s) 536
BseAI TCCGGA 1 cut(s) 1707
BseBI CCWGG 3 cut(s) 311, 981, 1811
BseDI CCNNGG 5 cut(s) 1577, 1926, 1932, 2070, 2417
BseGI GGATG 7 cut(s) 47, 319, 1123, 1274, 1346, 1595, 1716
BseJI GATNNNNATC 1 cut(s) 536
BseLI CCNNNNNNNGG 3 cut(s) 541, 774, 2168
BseNI ACTGG 4 cut(s) 198, 239, 743, 1312
BseRI GAGGAG 1 cut(s) 19
BseSI GKGCMC 1 cut(s) 988
BseYI CCCAGC 1 cut(s) 2161
BsgI GTGCAG 2 cut(s) 705, 2317
BshFI GGCC 5 cut(s) 507, 1763, 1931, 2017, 2423
BshNI GGYRCC 2 cut(s) 1551, 2411
BsiHKAI GWGCWC 4 cut(s) 345, 384, 988, 2367
BsiHKCI CYCGRG 1 cut(s) 1377
BsiSI CCGG 4 cut(s) 1475, 1523, 1708, 2481
BslFI GGGAC 2 cut(s) 2056, 2366
BslI CCNNNNNNNGG 3 cut(s) 541, 774, 2168
BsmAI GTCTC 2 cut(s) 1907, 2454
BsmFI GGGAC 2 cut(s) 2056, 2366
BsmI GAATGC 3 cut(s) 577, 1012, 2311
BsnI GGCC 5 cut(s) 507, 1763, 1931, 2017, 2423
Bso31I GGTCTC 1 cut(s) 2454
BsoBI CYCGRG 1 cut(s) 1377
Bsp119I TTCGAA 1 cut(s) 1642
Bsp1286I GDGCHC 4 cut(s) 345, 384, 988, 2367
Bsp13I TCCGGA 1 cut(s) 1707
BspACI CCGC 5 cut(s) 1010, 1134, 1454, 1947, 2384
BspANI GGCC 5 cut(s) 507, 1763, 1931, 2017, 2423
BspEI TCCGGA 1 cut(s) 1707
BspMAI CTGCAG 1 cut(s) 683
BspMI ACCTGC 2 cut(s) 706, 1162
BspPI GGATC 6 cut(s) 478, 526, 734, 917, 2248, 2261
BspT104I TTCGAA 1 cut(s) 1642
BspT107I GGYRCC 2 cut(s) 1551, 2411
BspTNI GGTCTC 1 cut(s) 2454
BsrFI RCCGGY 2 cut(s) 1474, 2480
BsrI ACTGG 4 cut(s) 198, 239, 743, 1312
BssAI RCCGGY 2 cut(s) 1474, 2480
BssECI CCNNGG 5 cut(s) 1577, 1926, 1932, 2070, 2417
BssNI GRCGYC 1 cut(s) 1552
BssT1I CCWWGG 3 cut(s) 1577, 1932, 2417
Bst2UI CCWGG 3 cut(s) 311, 981, 1811
Bst4CI ACNGT 5 cut(s) 430, 814, 871, 1263, 1757
Bst6I CTCTTC 1 cut(s) 96
BstACI GRCGYC 1 cut(s) 1552
BstAPI GCANNNNNTGC 3 cut(s) 884, 1394, 2315
BstBI TTCGAA 1 cut(s) 1642
BstC8I GCNNGC 2 cut(s) 641, 1716
BstDSI CCRYGG 1 cut(s) 2070
BstENI CCTNNNNNAGG 2 cut(s) 539, 772
BstF5I GGATG 7 cut(s) 47, 319, 1123, 1274, 1346, 1595, 1716
BstH2I RGCGCY 1 cut(s) 1555
BstHHI GCGC 2 cut(s) 472, 1554
BstMAI GTCTC 2 cut(s) 1907, 2454
BstMWI GCNNNNNNNGC 7 cut(s) 178, 884, 1394, 1720, 2072, 2198, 2315
BstNI CCWGG 3 cut(s) 311, 981, 1811
BstNSI RCATGY 2 cut(s) 643, 974
BstSCI CCNGG 3 cut(s) 309, 979, 1809
BstSFI CTRYAG 4 cut(s) 679, 1227, 1435, 1794
BstSLI GKGCMC 1 cut(s) 988
BstV2I GAAGAC 2 cut(s) 338, 1218
BstX2I RGATCY 6 cut(s) 483, 531, 739, 1217, 1246, 2253
BstXI CCANNNNNNTGG 1 cut(s) 2471
BstYI RGATCY 6 cut(s) 483, 531, 739, 1217, 1246, 2253
Bsu36I CCTNAGG 1 cut(s) 515
BsuRI GGCC 5 cut(s) 507, 1763, 1931, 2017, 2423
BtgI CCRYGG 1 cut(s) 2070
BtsCI GGATG 7 cut(s) 47, 319, 1123, 1274, 1346, 1595, 1716
BtsI GCAGTG 2 cut(s) 688, 1447
BtsIMutI CAGTG 6 cut(s) 688, 750, 867, 878, 1447, 1974
BveI ACCTGC 2 cut(s) 706, 1162
Cac8I GCNNGC 2 cut(s) 641, 1716
CaiI CAGNNNCTG 7 cut(s) 328, 980, 1160, 1394, 2168, 2192, 2315
CfoI GCGC 2 cut(s) 472, 1554
Cfr10I RCCGGY 2 cut(s) 1474, 2480
Cfr13I GGNCC 8 cut(s) 70, 505, 1404, 1469, 1761, 1807, 2158, 2421
CseI GACGC 1 cut(s) 638
Csp6I GTAC 6 cut(s) 85, 128, 465, 1242, 1374, 2140
CviAII CATG 7 cut(s) 53, 640, 644, 971, 1904, 2099, 2471
CviQI GTAC 6 cut(s) 85, 128, 465, 1242, 1374, 2140
DinI GGCGCC 1 cut(s) 1553
DraI TTTAAA 1 cut(s) 1462
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
Ecl136II GAGCTC 1 cut(s) 382
Eco130I CCWWGG 3 cut(s) 1577, 1932, 2417
Eco147I AGGCCT 1 cut(s) 2017
Eco24I GRGCYC 1 cut(s) 384
Eco31I GGTCTC 1 cut(s) 2454
Eco32I GATATC 2 cut(s) 288, 1183
Eco47I GGWCC 5 cut(s) 70, 1404, 1469, 1807, 2158
Eco53kI GAGCTC 1 cut(s) 382
Eco57I CTGAAG 6 cut(s) 350, 584, 1230, 1323, 2241, 2440
Eco81I CCTNAGG 1 cut(s) 515
Eco88I CYCGRG 1 cut(s) 1377
EcoICRI GAGCTC 1 cut(s) 382
EcoNI CCTNNNNNAGG 2 cut(s) 539, 772
EcoO109I RGGNCCY 2 cut(s) 505, 1404
EcoRII CCWGG 3 cut(s) 309, 979, 1809
EcoRV GATATC 2 cut(s) 288, 1183
EcoT14I CCWWGG 3 cut(s) 1577, 1932, 2417
EcoT22I ATGCAT 1 cut(s) 645
EcoT38I GRGCYC 1 cut(s) 384
EgeI GGCGCC 1 cut(s) 1553
EheI GGCGCC 1 cut(s) 1553
ErhI CCWWGG 3 cut(s) 1577, 1932, 2417
FaeI CATG 7 cut(s) 56, 643, 647, 974, 1907, 2102, 2474
FalI AAGNNNNNCTT 3 cut(s) 32, 246, 278
FaqI GGGAC 2 cut(s) 2056, 2366
FatI CATG 7 cut(s) 52, 639, 643, 970, 1903, 2098, 2470
FauI CCCGC 1 cut(s) 2391
FauNDI CATATG 4 cut(s) 163, 405, 618, 1699
FblI GTMKAC 1 cut(s) 1265
FokI GGATG 7 cut(s) 34, 326, 1110, 1261, 1333, 1582, 1723
FriOI GRGCYC 1 cut(s) 384
GlaI GCGC 2 cut(s) 471, 1553
GsaI CCCAGC 1 cut(s) 2165
GsuI CTGGAG 1 cut(s) 746
HaeII RGCGCY 1 cut(s) 1555
HaeIII GGCC 5 cut(s) 507, 1763, 1931, 2017, 2423
HapII CCGG 4 cut(s) 1475, 1523, 1708, 2481
HgaI GACGC 1 cut(s) 638
HhaI GCGC 2 cut(s) 472, 1554
Hin1I GRCGYC 1 cut(s) 1552
Hin1II CATG 7 cut(s) 56, 643, 647, 974, 1907, 2102, 2474
Hin6I GCGC 2 cut(s) 470, 1552
HinP1I GCGC 2 cut(s) 470, 1552
HincII GTYRAC 2 cut(s) 1047, 2179
HindII GTYRAC 2 cut(s) 1047, 2179
HpaII CCGG 4 cut(s) 1475, 1523, 1708, 2481
HphI GGTGA 2 cut(s) 1029, 1263
Hpy166II GTNNAC 4 cut(s) 986, 1047, 1266, 2179
Hpy8I GTNNAC 4 cut(s) 986, 1047, 1266, 2179
Hpy99I CGWCG 1 cut(s) 1321
HpyCH4III ACNGT 5 cut(s) 430, 814, 871, 1263, 1757
HpyF10VI GCNNNNNNNGC 7 cut(s) 178, 884, 1394, 1720, 2072, 2198, 2315
Hsp92I GRCGYC 1 cut(s) 1552
Hsp92II CATG 7 cut(s) 56, 643, 647, 974, 1907, 2102, 2474
HspAI GCGC 2 cut(s) 470, 1552
KasI GGCGCC 1 cut(s) 1551
Kpn2I TCCGGA 1 cut(s) 1707
LmnI GCTCC 6 cut(s) 220, 727, 1151, 1791, 2370, 2375
MaeIII GTNAC 5 cut(s) 197, 631, 1035, 1822, 2400
MboII GAAGA 7 cut(s) 113, 133, 200, 343, 998, 1223, 2446
MfeI CAATTG 2 cut(s) 1887, 2235
MflI RGATCY 6 cut(s) 483, 531, 739, 1217, 1246, 2253
MhlI GDGCHC 4 cut(s) 345, 384, 988, 2367
Mly113I GGCGCC 1 cut(s) 1552
MlyI GAGTC 5 cut(s) 908, 989, 1052, 1585, 2038
MmeI TCCRAC 1 cut(s) 2093
Mph1103I ATGCAT 1 cut(s) 645
MroI TCCGGA 1 cut(s) 1707
MslI CAYNNNNRTG 3 cut(s) 638, 2469, 2475
MspA1I CMGCKG 3 cut(s) 325, 2165, 2312
MspI CCGG 4 cut(s) 1475, 1523, 1708, 2481
MspR9I CCNGG 3 cut(s) 311, 981, 1811
MunI CAATTG 2 cut(s) 1887, 2235
Mva1269I GAATGC 3 cut(s) 577, 1012, 2311
MvaI CCWGG 3 cut(s) 311, 981, 1811
MwoI GCNNNNNNNGC 7 cut(s) 178, 884, 1394, 1720, 2072, 2198, 2315
NarI GGCGCC 1 cut(s) 1552
NdeI CATATG 4 cut(s) 163, 405, 618, 1699
NlaIII CATG 7 cut(s) 56, 643, 647, 974, 1907, 2102, 2474
NmeAIII GCCGAG 1 cut(s) 1951
NmuCI GTSAC 5 cut(s) 197, 631, 1035, 1822, 2400
NsiI ATGCAT 1 cut(s) 645
NspI RCATGY 2 cut(s) 643, 974
NspV TTCGAA 1 cut(s) 1642
PaeI GCATGC 1 cut(s) 643
PaeR7I CTCGAG 1 cut(s) 1377
PceI AGGCCT 1 cut(s) 2017
PctI GAATGC 3 cut(s) 577, 1012, 2311
PfeI GAWTC 6 cut(s) 146, 259, 278, 523, 1799, 2451
PflMI CCANNNNNTGG 1 cut(s) 2168
PfoI TCCNGGA 1 cut(s) 1809
PleI GAGTC 5 cut(s) 907, 989, 1051, 1585, 2038
PluTI GGCGCC 1 cut(s) 1555
PpsI GAGTC 5 cut(s) 907, 989, 1051, 1585, 2038
PpuMI RGGWCCY 1 cut(s) 1404
Psp124BI GAGCTC 1 cut(s) 384
Psp5II RGGWCCY 1 cut(s) 1404
Psp6I CCWGG 3 cut(s) 309, 979, 1809
PspFI CCCAGC 1 cut(s) 2161
PspGI CCWGG 3 cut(s) 309, 979, 1809
PspPI GGNCC 8 cut(s) 70, 505, 1404, 1469, 1761, 1807, 2158, 2421
PspPPI RGGWCCY 1 cut(s) 1404
PstI CTGCAG 1 cut(s) 683
PstNI CAGNNNCTG 7 cut(s) 328, 980, 1160, 1394, 2168, 2192, 2315
PsuI RGATCY 6 cut(s) 483, 531, 739, 1217, 1246, 2253
PvuII CAGCTG 3 cut(s) 325, 2165, 2312
RsaI GTAC 6 cut(s) 86, 129, 466, 1243, 1375, 2141
RsaNI GTAC 6 cut(s) 85, 128, 465, 1242, 1374, 2140
RseI CAYNNNNRTG 3 cut(s) 638, 2469, 2475
SacI GAGCTC 1 cut(s) 384
Sau96I GGNCC 8 cut(s) 70, 505, 1404, 1469, 1761, 1807, 2158, 2421
ScaI AGTACT 2 cut(s) 86, 2141
SchI GAGTC 5 cut(s) 908, 989, 1052, 1585, 2038
ScrFI CCNGG 3 cut(s) 311, 981, 1811
SduI GDGCHC 4 cut(s) 345, 384, 988, 2367
SfcI CTRYAG 4 cut(s) 679, 1227, 1435, 1794
SfoI GGCGCC 1 cut(s) 1553
Sfr274I CTCGAG 1 cut(s) 1377
SfuI TTCGAA 1 cut(s) 1642
SinI GGWCC 5 cut(s) 70, 1404, 1469, 1807, 2158
SlaI CTCGAG 1 cut(s) 1377
SmiMI CAYNNNNRTG 3 cut(s) 638, 2469, 2475
SmlI CTYRAG 3 cut(s) 377, 1377, 1910
SmoI CTYRAG 3 cut(s) 377, 1377, 1910
SpeI ACTAGT 1 cut(s) 1070
SphI GCATGC 1 cut(s) 643
SseBI AGGCCT 1 cut(s) 2017
SsiI CCGC 5 cut(s) 1010, 1134, 1454, 1947, 2384
SspDI GGCGCC 1 cut(s) 1551
SspI AATATT 1 cut(s) 2094
SstI GAGCTC 1 cut(s) 384
StuI AGGCCT 1 cut(s) 2017
StyD4I CCNGG 3 cut(s) 309, 979, 1809
StyI CCWWGG 3 cut(s) 1577, 1932, 2417
TaaI ACNGT 5 cut(s) 430, 814, 871, 1263, 1757
TatI WGTACW 3 cut(s) 84, 127, 2139
TauI GCSGC 1 cut(s) 1949
TfiI GAWTC 6 cut(s) 146, 259, 278, 523, 1799, 2451
TscAI CASTG 6 cut(s) 688, 750, 874, 885, 1447, 1974
TseFI GTSAC 5 cut(s) 197, 631, 1035, 1822, 2400
Tsp45I GTSAC 5 cut(s) 197, 631, 1035, 1822, 2400
TspDTI ATGAA 9 cut(s) 36, 150, 180, 225, 772, 1017, 1299, 1716, 1892
TspGWI ACGGA 1 cut(s) 1778
TspRI CASTG 6 cut(s) 688, 750, 874, 885, 1447, 1974
Van91I CCANNNNNTGG 1 cut(s) 2168
VneI GTGCAC 1 cut(s) 984
VpaK11BI GGWCC 5 cut(s) 70, 1404, 1469, 1807, 2158
XagI CCTNNNNNAGG 2 cut(s) 539, 772
XapI RAATTY 3 cut(s) 64, 1286, 1816
XceI RCATGY 2 cut(s) 643, 974
XcmI CCANNNNNNNNNTGG 1 cut(s) 1771
XhoI CTCGAG 1 cut(s) 1377
XmiI GTMKAC 1 cut(s) 1265
ZrmI AGTACT 2 cut(s) 86, 2141
Zsp2I ATGCAT 1 cut(s) 645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.