Rh2AG191600

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0003836
Physical Location & Seq
Forward (+)
18990025 .. 18997579
7555 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG191600.1

Sequence Viewer

Length: 2085 bp
ATGAGCTATGAGCAAACATCAACTGTCATTAAAGATGCTATAAGTGATCTAGTGGAGGGTATTGCGCCTAGCTCAGAGATCCTAGTGAAAATTGCAGAGGGCCTTAGCTTGAGGTCAAATCAGGAGATCCTTATCGAGGCTGTGGCACTCGAAAAGCTGAAGGAGAATGCTGAACAATCTGAAAAGATCGAGGAAGCAGAATATATTGAGCATATGATAGCCCTCGTCACTCGTATGCATGAGCGTCTTATTACGATAAAGCAGTCTGAAAGCTGCAGCGCAGTTCCAATACCTGCTGATTTCTGCTGTCCTCTCTCTCTGGAGCTGATGACAGATCCAGTGATTGTGGCATCAGGACAAACCTATGAGAGGACTTTCATCAAGAATTGGATTGATCTTGGCCTCACAGTTTGTCCTAAGACACGGCAGACTTTAGCTCACACCAATTTGATACCTAATTACACTGTAAAGGCACTGATTGCAAATTGGTGTGAGTCAAACAATGTGAAACTGCCTGATCCCACAAAGTCTGTGTGCTTAAATAAGCCAACACACCTTCTTGGACATGCAGAGCCTGGTGCGCCAAAGGACTCGCCTATTCTTCCTCATTCTAGGGTCAATTCATCAATGTCACCTGAGTCAACTCGATCTATGGGTTCCCCCACTAATAAATATATCTCATCTGGTGGATTGCATCGGGAAGGAAGTTCTCCATTCCATCCTCGTTCCGCATCAGAAGGTTCCTTGTCAGTAGCTGGAAATGGGCAGGTTTTGGATATCGCAAGAGTATCATCTACAAGTTCTGAAGACAGATCTGCCACTATAGACGAAAGGGGTACAGATCTAGTGAGCCAACAGTCTACATCACCATCCAGAAATGAATTTCCTATTACTACTGAAGCCAACCAGTCATCGCAAAACCATAATAGAAGTGCCTCAGCATCCAGCATACTTTCTAATACCAATGGTACTCGAGAAAATGCAGTAGATGCCGATGGGTCCTTACAGACATCAGGCAACCTGTCAGGCTACAGCAGTGATGCTTCTGGGGAGTTTAGATCAGGAACACCAGCTGCTACCCCTCAACATAGAGAAACTGAGTTGCCAACCAGATTGCCGGAGGCAAGACCTCGAAACCCAATGTGGCGCCGACCTTCTGGTAACTTAATCCCAAGGATTTTGACTCCATCCACTGAAACAAGACCTGACCTTTCTGGACTAGAAGCCCAAGTTCGAACTCTGGTAGAGGACTTGAAAAGCACTTCACTTGATACTCAAAGAGAAGCAACATATGAACTCCGGATGCTTGCAAAGCATAATATGGATAATCGGATTGTTATTGCAAACTGTGGGGCCATTACCTTGTTGGTGGAATTACTCCGTTCTACAGATTCAAGGGTCCAGGAAAATTCTGTCACAGCACTTCTTAACTTGTCGATCAATGATAACAACAAAACTTTAATTGCTACTGCTAACGCAATTGAACCTCTTATTCATGTCCTTGAGACAGGGAGTGCTGAGGCCAAGGAGAACTCAGCCGCCACTCTGTTTAGCCTTTCGGTGATTGAGGATAACAAGGTTCGTATTGGAAGGTCAGGGGCTATTAGGCCTCTAGTTGATCTATTGGGGAATGGGACTCCTAGAGGGAGGAAAGATGCTGCCACGGCTTTGTTTAATTTGTCAATATTCCATGAGAACAAAGGTCGGATTGTTCAAGCTGGTGCTGTAAAGTACTTGGTGGAGTTAATGGACCCAGCTGCTGGAATGGTTGACAAGGCCGTTGCTGTTTTGGCTAATCTTTCTACAATTCCTGAAGGAAGGACGGCAATTGGTCAGGAGGGTGGGATCCCTGTTCTAGTTGAGGTGGTTGAGTTGGGTTCTGCTAGAGGGAAGGAGAATGCAGCTGCTGCTCTTTTACAGCTCTGCACAAATAGTAATAGGTATTGCAGTATGGTGCTCCAAGAAGGAGCTGTCCCGCCGTTAGTCGTATTGTCACAATCTGGCACCCCAAGGGCCAGAGAAAAGGCTCAGACACTACTTAGATACTTCAGAGACCATAGACATGGTAGTGCCGGTAGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

694

Amino Acids

74.77

Weight (kDa)

6.0

Isoelectric Point (pI)

45.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
U-box PF04564 97 - 167 4e-22 U-box domain
ARM_PUB PF25598 410 - 686 3.5e-29 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 411 - 583 1.5e-09 ARMC5
Arm PF00514 442 - 479 2.3e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 524 - 561 1.8e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 301, 757
AccB1I GGYRCC 2 cut(s) 1146, 2003
AccB7I CCANNNNNTGG 1 cut(s) 1760
AccI GTMKAC 1 cut(s) 860
AccIII TCCGGA 1 cut(s) 1299
AciI CCGC 3 cut(s) 729, 1539, 1976
AclWI GGATC 6 cut(s) 73, 121, 329, 512, 1840, 1853
AcsI RAATTY 2 cut(s) 881, 1408
AcuI CTGAAG 5 cut(s) 179, 825, 918, 1833, 2032
AcyI GRCGYC 1 cut(s) 1147
AfaI GTAC 3 cut(s) 838, 970, 1733
AfiI CCNNNNNNNGG 3 cut(s) 136, 369, 1760
AgsI TTSAA 4 cut(s) 1255, 1395, 1484, 1715
AjnI CCWGG 2 cut(s) 574, 1401
Alw21I GWGCWC 1 cut(s) 1959
Alw26I GTCTC 2 cut(s) 1499, 2046
AlwI GGATC 6 cut(s) 73, 121, 329, 512, 1840, 1853
AlwNI CAGNNNCTG 4 cut(s) 575, 755, 1760, 1907
Ama87I CYCGRG 1 cut(s) 972
Aor13HI TCCGGA 1 cut(s) 1299
AoxI GGCC 7 cut(s) 100, 400, 1353, 1521, 1607, 1776, 2013
ApeKI GCWGC 8 cut(s) 273, 276, 1073, 1658, 1757, 1901, 1904, 1907
ApoI RAATTY 2 cut(s) 881, 1408
AspLEI GCGC 4 cut(s) 67, 281, 583, 1149
AspS9I GGNCC 6 cut(s) 100, 999, 1353, 1399, 1750, 2013
AsuHPI GGTGA 3 cut(s) 624, 858, 1573
AsuII TTCGAA 1 cut(s) 1234
AvaI CYCGRG 1 cut(s) 972
AvaII GGWCC 3 cut(s) 999, 1399, 1750
BamHI GGATCC 1 cut(s) 1845
BanI GGYRCC 2 cut(s) 1146, 2003
BbsI GAAGAC 1 cut(s) 813
Bbv12I GWGCWC 1 cut(s) 1959
BbvCI CCTCAGC 2 cut(s) 937, 1518
BbvI GCAGC 8 cut(s) 260, 288, 1060, 1645, 1744, 1891, 1894, 1913
BccI CCATC 4 cut(s) 726, 877, 989, 1195
BceAI ACGGC 5 cut(s) 440, 1680, 1763, 1839, 1963
BciT130I CCWGG 2 cut(s) 576, 1403
BcoDI GTCTC 2 cut(s) 1499, 2046
BfmI CTRYAG 4 cut(s) 274, 822, 1030, 1386
BfoI RGCGCY 1 cut(s) 1150
BfuAI ACCTGC 2 cut(s) 301, 757
BglII AGATCT 2 cut(s) 812, 841
BisI GCNGC 9 cut(s) 274, 277, 1074, 1539, 1659, 1758, 1902, 1905, 1908
BlsI GCNGC 9 cut(s) 275, 278, 1075, 1540, 1660, 1759, 1903, 1906, 1909
BmcAI AGTACT 1 cut(s) 1733
Bme1390I CCNGG 2 cut(s) 576, 1403
Bme18I GGWCC 3 cut(s) 999, 1399, 1750
BmeT110I CYCGRG 1 cut(s) 972
BmgT120I GGNCC 6 cut(s) 100, 999, 1353, 1399, 1750, 2013
BmiI GGNNCC 9 cut(s) 658, 742, 1000, 1148, 1354, 1400, 1752, 1847, 2005
BmrFI CCNGG 2 cut(s) 576, 1403
BmsI GCATC 9 cut(s) 25, 359, 703, 740, 950, 979, 1030, 1293, 1645
BpiI GAAGAC 1 cut(s) 813
BpmI CTGGAG 1 cut(s) 341
Bpu10I CCTNAGC 3 cut(s) 104, 937, 1518
Bpu14I TTCGAA 1 cut(s) 1234
BpuEI CTTGAG 2 cut(s) 130, 1523
BsaBI GATNNNNATC 1 cut(s) 131
BsaHI GRCGYC 1 cut(s) 1147
BsaI GGTCTC 1 cut(s) 2046
BsaJI CCNNGG 4 cut(s) 1172, 1524, 1662, 2009
BsaWI WCCGGW 1 cut(s) 1299
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 369, 1760
Bse118I RCCGGY 1 cut(s) 2072
Bse1I ACTGG 2 cut(s) 338, 907
Bse8I GATNNNNATC 1 cut(s) 131
BseAI TCCGGA 1 cut(s) 1299
BseBI CCWGG 2 cut(s) 576, 1403
BseDI CCNNGG 4 cut(s) 1172, 1524, 1662, 2009
BseGI GGATG 5 cut(s) 718, 869, 941, 1187, 1308
BseJI GATNNNNATC 1 cut(s) 131
BseLI CCNNNNNNNGG 3 cut(s) 136, 369, 1760
BseMII CTCAG 7 cut(s) 87, 627, 951, 1089, 1509, 1548, 2042
BseNI ACTGG 2 cut(s) 338, 907
BseXI GCAGC 8 cut(s) 260, 288, 1060, 1645, 1744, 1891, 1894, 1913
BseYI CCCAGC 1 cut(s) 1753
BsgI GTGCAG 1 cut(s) 1909
BshFI GGCC 7 cut(s) 102, 402, 1355, 1523, 1609, 1778, 2015
BshNI GGYRCC 2 cut(s) 1146, 2003
BsiHKAI GWGCWC 1 cut(s) 1959
BsiHKCI CYCGRG 1 cut(s) 972
BsiSI CCGG 3 cut(s) 1118, 1300, 2073
BslFI GGGAC 2 cut(s) 1648, 1958
BslI CCNNNNNNNGG 3 cut(s) 136, 369, 1760
BsmAI GTCTC 2 cut(s) 1499, 2046
BsmFI GGGAC 2 cut(s) 1648, 1958
BsmI GAATGC 2 cut(s) 172, 1903
BsnI GGCC 7 cut(s) 102, 402, 1355, 1523, 1609, 1778, 2015
Bso31I GGTCTC 1 cut(s) 2046
BsoBI CYCGRG 1 cut(s) 972
Bsp119I TTCGAA 1 cut(s) 1234
Bsp1286I GDGCHC 1 cut(s) 1959
Bsp13I TCCGGA 1 cut(s) 1299
BspACI CCGC 3 cut(s) 729, 1539, 1976
BspANI GGCC 7 cut(s) 102, 402, 1355, 1523, 1609, 1778, 2015
BspCNI CTCAG 7 cut(s) 86, 628, 950, 1090, 1510, 1547, 2041
BspEI TCCGGA 1 cut(s) 1299
BspLI GGNNCC 9 cut(s) 658, 742, 1000, 1148, 1354, 1400, 1752, 1847, 2005
BspMAI CTGCAG 1 cut(s) 278
BspMI ACCTGC 2 cut(s) 301, 757
BspPI GGATC 6 cut(s) 73, 121, 329, 512, 1840, 1853
BspT104I TTCGAA 1 cut(s) 1234
BspT107I GGYRCC 2 cut(s) 1146, 2003
BspTNI GGTCTC 1 cut(s) 2046
BsrFI RCCGGY 1 cut(s) 2072
BsrI ACTGG 2 cut(s) 338, 907
BssAI RCCGGY 1 cut(s) 2072
BssECI CCNNGG 4 cut(s) 1172, 1524, 1662, 2009
BssNI GRCGYC 1 cut(s) 1147
BssT1I CCWWGG 3 cut(s) 1172, 1524, 2009
Bst2UI CCWGG 2 cut(s) 576, 1403
Bst4CI ACNGT 5 cut(s) 25, 409, 466, 858, 1349
BstACI GRCGYC 1 cut(s) 1147
BstAPI GCANNNNNTGC 3 cut(s) 479, 989, 1907
BstBI TTCGAA 1 cut(s) 1234
BstC8I GCNNGC 1 cut(s) 1308
BstDSI CCRYGG 1 cut(s) 1662
BstENI CCTNNNNNAGG 2 cut(s) 134, 367
BstF5I GGATG 5 cut(s) 718, 869, 941, 1187, 1308
BstH2I RGCGCY 1 cut(s) 1150
BstHHI GCGC 4 cut(s) 67, 281, 583, 1149
BstMAI GTCTC 2 cut(s) 1499, 2046
BstMWI GCNNNNNNNGC 7 cut(s) 479, 580, 989, 1312, 1664, 1790, 1907
BstNI CCWGG 2 cut(s) 576, 1403
BstNSI RCATGY 1 cut(s) 569
BstSCI CCNGG 2 cut(s) 574, 1401
BstSFI CTRYAG 4 cut(s) 274, 822, 1030, 1386
BstV1I GCAGC 8 cut(s) 260, 288, 1060, 1645, 1744, 1891, 1894, 1913
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 6 cut(s) 78, 126, 334, 812, 841, 1845
BstXI CCANNNNNNTGG 1 cut(s) 2063
BstYI RGATCY 6 cut(s) 78, 126, 334, 812, 841, 1845
BsuRI GGCC 7 cut(s) 102, 402, 1355, 1523, 1609, 1778, 2015
BtgI CCRYGG 1 cut(s) 1662
BtgZI GCGATG 1 cut(s) 897
BtsCI GGATG 5 cut(s) 718, 869, 941, 1187, 1308
BtsI GCAGTG 1 cut(s) 1042
BtsIMutI CAGTG 5 cut(s) 345, 462, 473, 1042, 1191
BveI ACCTGC 2 cut(s) 301, 757
Cac8I GCNNGC 1 cut(s) 1308
CaiI CAGNNNCTG 4 cut(s) 575, 755, 1760, 1907
CfoI GCGC 4 cut(s) 67, 281, 583, 1149
Cfr10I RCCGGY 1 cut(s) 2072
Cfr13I GGNCC 6 cut(s) 100, 999, 1353, 1399, 1750, 2013
CseI GACGC 1 cut(s) 233
Csp6I GTAC 3 cut(s) 837, 969, 1732
CviAII CATG 5 cut(s) 239, 566, 1496, 1691, 2063
CviQI GTAC 3 cut(s) 837, 969, 1732
DinI GGCGCC 1 cut(s) 1148
Eco130I CCWWGG 3 cut(s) 1172, 1524, 2009
Eco147I AGGCCT 1 cut(s) 1609
Eco31I GGTCTC 1 cut(s) 2046
Eco32I GATATC 1 cut(s) 778
Eco47I GGWCC 3 cut(s) 999, 1399, 1750
Eco57I CTGAAG 5 cut(s) 179, 825, 918, 1833, 2032
Eco88I CYCGRG 1 cut(s) 972
EcoNI CCTNNNNNAGG 2 cut(s) 134, 367
EcoO109I RGGNCCY 2 cut(s) 100, 999
EcoRII CCWGG 2 cut(s) 574, 1401
EcoRV GATATC 1 cut(s) 778
EcoT14I CCWWGG 3 cut(s) 1172, 1524, 2009
EcoT22I ATGCAT 1 cut(s) 240
EgeI GGCGCC 1 cut(s) 1148
EheI GGCGCC 1 cut(s) 1148
ErhI CCWWGG 3 cut(s) 1172, 1524, 2009
FaeI CATG 5 cut(s) 242, 569, 1499, 1694, 2066
FaqI GGGAC 2 cut(s) 1648, 1958
FatI CATG 5 cut(s) 238, 565, 1495, 1690, 2062
FauI CCCGC 1 cut(s) 1983
FauNDI CATATG 2 cut(s) 213, 1291
FblI GTMKAC 1 cut(s) 860
Fnu4HI GCNGC 9 cut(s) 274, 277, 1074, 1539, 1659, 1758, 1902, 1905, 1908
FokI GGATG 5 cut(s) 705, 856, 928, 1174, 1315
Fsp4HI GCNGC 9 cut(s) 274, 277, 1074, 1539, 1659, 1758, 1902, 1905, 1908
GlaI GCGC 4 cut(s) 66, 280, 582, 1148
GluI GCNGC 9 cut(s) 274, 277, 1074, 1539, 1659, 1758, 1902, 1905, 1908
GsaI CCCAGC 1 cut(s) 1757
GsuI CTGGAG 1 cut(s) 341
HaeII RGCGCY 1 cut(s) 1150
HaeIII GGCC 7 cut(s) 102, 402, 1355, 1523, 1609, 1778, 2015
HapII CCGG 3 cut(s) 1118, 1300, 2073
HgaI GACGC 1 cut(s) 233
HhaI GCGC 4 cut(s) 67, 281, 583, 1149
Hin1I GRCGYC 1 cut(s) 1147
Hin1II CATG 5 cut(s) 242, 569, 1499, 1694, 2066
Hin6I GCGC 4 cut(s) 65, 279, 581, 1147
HinP1I GCGC 4 cut(s) 65, 279, 581, 1147
HincII GTYRAC 2 cut(s) 642, 1771
HindII GTYRAC 2 cut(s) 642, 1771
HinfI GANTC 6 cut(s) 494, 590, 638, 1183, 1391, 1636
HpaII CCGG 3 cut(s) 1118, 1300, 2073
HphI GGTGA 3 cut(s) 624, 858, 1573
Hpy166II GTNNAC 3 cut(s) 642, 861, 1771
Hpy188I TCNGA 9 cut(s) 76, 181, 268, 736, 805, 1332, 1707, 2031, 2051
Hpy8I GTNNAC 3 cut(s) 642, 861, 1771
HpyCH4III ACNGT 5 cut(s) 25, 409, 466, 858, 1349
HpyF10VI GCNNNNNNNGC 7 cut(s) 479, 580, 989, 1312, 1664, 1790, 1907
Hsp92I GRCGYC 1 cut(s) 1147
Hsp92II CATG 5 cut(s) 242, 569, 1499, 1694, 2066
HspAI GCGC 4 cut(s) 65, 279, 581, 1147
KasI GGCGCC 1 cut(s) 1146
Kpn2I TCCGGA 1 cut(s) 1299
LmnI GCTCC 3 cut(s) 322, 1962, 1967
Lsp1109I GCAGC 8 cut(s) 260, 288, 1060, 1645, 1744, 1891, 1894, 1913
LweI GCATC 9 cut(s) 25, 359, 703, 740, 950, 979, 1030, 1293, 1645
MaeIII GTNAC 5 cut(s) 226, 630, 1160, 1414, 1992
MboII GAAGA 2 cut(s) 593, 818
MfeI CAATTG 2 cut(s) 1479, 1827
MflI RGATCY 6 cut(s) 78, 126, 334, 812, 841, 1845
MhlI GDGCHC 1 cut(s) 1959
Mly113I GGCGCC 1 cut(s) 1147
MlyI GAGTC 5 cut(s) 503, 584, 647, 1177, 1630
MmeI TCCRAC 1 cut(s) 1685
Mph1103I ATGCAT 1 cut(s) 240
MroI TCCGGA 1 cut(s) 1299
MseI TTAA 7 cut(s) 30, 539, 1166, 1428, 1460, 1674, 1745
MslI CAYNNNNRTG 3 cut(s) 233, 2061, 2067
MspA1I CMGCKG 3 cut(s) 1073, 1757, 1904
MspI CCGG 3 cut(s) 1118, 1300, 2073
MspR9I CCNGG 2 cut(s) 576, 1403
MunI CAATTG 2 cut(s) 1479, 1827
Mva1269I GAATGC 2 cut(s) 172, 1903
MvaI CCWGG 2 cut(s) 576, 1403
MwoI GCNNNNNNNGC 7 cut(s) 479, 580, 989, 1312, 1664, 1790, 1907
NarI GGCGCC 1 cut(s) 1147
NdeI CATATG 2 cut(s) 213, 1291
NlaIII CATG 5 cut(s) 242, 569, 1499, 1694, 2066
NlaIV GGNNCC 9 cut(s) 658, 742, 1000, 1148, 1354, 1400, 1752, 1847, 2005
NmuCI GTSAC 4 cut(s) 226, 630, 1414, 1992
NsiI ATGCAT 1 cut(s) 240
NspI RCATGY 1 cut(s) 569
NspV TTCGAA 1 cut(s) 1234
PaeR7I CTCGAG 1 cut(s) 972
PceI AGGCCT 1 cut(s) 1609
PctI GAATGC 2 cut(s) 172, 1903
PfeI GAWTC 1 cut(s) 1391
PflMI CCANNNNNTGG 1 cut(s) 1760
PfoI TCCNGGA 1 cut(s) 1401
PkrI GCNGC 9 cut(s) 275, 278, 1075, 1540, 1660, 1759, 1903, 1906, 1909
PleI GAGTC 5 cut(s) 502, 584, 646, 1177, 1630
PluTI GGCGCC 1 cut(s) 1150
PpsI GAGTC 5 cut(s) 502, 584, 646, 1177, 1630
PpuMI RGGWCCY 1 cut(s) 999
Psp5II RGGWCCY 1 cut(s) 999
Psp6I CCWGG 2 cut(s) 574, 1401
PspFI CCCAGC 1 cut(s) 1753
PspGI CCWGG 2 cut(s) 574, 1401
PspN4I GGNNCC 9 cut(s) 658, 742, 1000, 1148, 1354, 1400, 1752, 1847, 2005
PspPI GGNCC 6 cut(s) 100, 999, 1353, 1399, 1750, 2013
PspPPI RGGWCCY 1 cut(s) 999
PstI CTGCAG 1 cut(s) 278
PstNI CAGNNNCTG 4 cut(s) 575, 755, 1760, 1907
PsuI RGATCY 6 cut(s) 78, 126, 334, 812, 841, 1845
PvuII CAGCTG 3 cut(s) 1073, 1757, 1904
RsaI GTAC 3 cut(s) 838, 970, 1733
RsaNI GTAC 3 cut(s) 837, 969, 1732
RseI CAYNNNNRTG 3 cut(s) 233, 2061, 2067
SaqAI TTAA 7 cut(s) 30, 539, 1166, 1428, 1460, 1674, 1745
SatI GCNGC 9 cut(s) 274, 277, 1074, 1539, 1659, 1758, 1902, 1905, 1908
Sau96I GGNCC 6 cut(s) 100, 999, 1353, 1399, 1750, 2013
ScaI AGTACT 1 cut(s) 1733
SchI GAGTC 5 cut(s) 503, 584, 647, 1177, 1630
ScrFI CCNGG 2 cut(s) 576, 1403
SduI GDGCHC 1 cut(s) 1959
SfaNI GCATC 9 cut(s) 25, 359, 703, 740, 950, 979, 1030, 1293, 1645
SfcI CTRYAG 4 cut(s) 274, 822, 1030, 1386
SfoI GGCGCC 1 cut(s) 1148
Sfr274I CTCGAG 1 cut(s) 972
SfuI TTCGAA 1 cut(s) 1234
SinI GGWCC 3 cut(s) 999, 1399, 1750
SlaI CTCGAG 1 cut(s) 972
SmiMI CAYNNNNRTG 3 cut(s) 233, 2061, 2067
SmlI CTYRAG 3 cut(s) 109, 972, 1502
SmoI CTYRAG 3 cut(s) 109, 972, 1502
SseBI AGGCCT 1 cut(s) 1609
SsiI CCGC 3 cut(s) 729, 1539, 1976
SspDI GGCGCC 1 cut(s) 1146
SspI AATATT 1 cut(s) 1686
StuI AGGCCT 1 cut(s) 1609
StyD4I CCNGG 2 cut(s) 574, 1401
StyI CCWWGG 3 cut(s) 1172, 1524, 2009
TaaI ACNGT 5 cut(s) 25, 409, 466, 858, 1349
TaqI TCGA 8 cut(s) 135, 150, 189, 646, 973, 1132, 1234, 1436
TatI WGTACW 1 cut(s) 1731
TauI GCSGC 1 cut(s) 1541
TfiI GAWTC 1 cut(s) 1391
Tru1I TTAA 7 cut(s) 30, 539, 1166, 1428, 1460, 1674, 1745
Tru9I TTAA 7 cut(s) 30, 539, 1166, 1428, 1460, 1674, 1745
TscAI CASTG 5 cut(s) 345, 469, 480, 1042, 1198
TseFI GTSAC 4 cut(s) 226, 630, 1414, 1992
TseI GCWGC 8 cut(s) 273, 276, 1073, 1658, 1757, 1901, 1904, 1907
Tsp45I GTSAC 4 cut(s) 226, 630, 1414, 1992
TspDTI ATGAA 5 cut(s) 367, 612, 894, 1308, 1484
TspGWI ACGGA 1 cut(s) 1370
TspRI CASTG 5 cut(s) 345, 469, 480, 1042, 1198
Van91I CCANNNNNTGG 1 cut(s) 1760
VpaK11BI GGWCC 3 cut(s) 999, 1399, 1750
XagI CCTNNNNNAGG 2 cut(s) 134, 367
XapI RAATTY 2 cut(s) 881, 1408
XceI RCATGY 1 cut(s) 569
XcmI CCANNNNNNNNNTGG 1 cut(s) 1363
XhoI CTCGAG 1 cut(s) 972
XmiI GTMKAC 1 cut(s) 860
ZrmI AGTACT 1 cut(s) 1733
Zsp2I ATGCAT 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.