Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003836

Physical Location & Seq

Genomic Coordinates Forward (+)

11250178 .. 11253798

Gene Structure 3621 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g14670.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGGAGATATCATTGTTCAAAGCACTTCTTAATAACATCTCCTCTTTTTTCCATTTATCATCTCATGACAACATAAACTTTGACCCGGTTTTGAAGTACTGCAAAAGAGCTGAAGAGATATTAAAATTGTTGAAGACTGTACTTGATGCCATTGCTGATTCTGAAATAGCTTCTTATGAACTGCTTAATAAGCCATTTGAAGAACTGGGTCAATATGTTGATGAGTTGAGGGAGCAAATTGAAGACTGGCAGCCATTGTTTAGTAAAGTCAAGCTTGTTCTTCAGGTTGAGTCATTGATATCAAAGATTTGGACTTCTGGCCTGGATATCTTTCAACTGTTGAAGACATCCCCGCAGCATCTTCCTGATGAATTGGGTTCAGCATCTCTTGAGCACTGCATACAAAAATTTAAGCACATGGGATATGAACAAATGTCAACTGTCATTAAAGATGCTATAAACGATCAAGTGGAGGGTGTTGGACCAAGCTCAGAGATCCTAGTGAAAATTGCAGAGGGCCTTAGCTTGAGGTCCAACCAGGAGATTCTTATTGAGGCTGTAGCACTTGAAAAGTTGAAGGAAAATGCTGAACAATCTGAAAAGATTGAGGAAGCAGAGTATATTGAGCATCTGATATCCCTTGTTACCTGTATGCACGAGCGCCTTATTACGATAAAGCAATCCGAGAGCTGCAGCCCCGTTCCAATACCTGCTGATTTCTGCTGCCCCCTCTCTCTGGAGCTGATGACGGATCCAGTGATCGTGGCATCAGGTCAAACCTACGAGAGGACTTTCATCAAGAACTGGATCGGTCTTGGCCTCACTGTTTGTCCAAAGACACGGCAGACTTTGGCTCACACCAATTTGATACCCAATTACACTGTGAAGGCACTAATTGCAAATTGGTGCGAGTCAAACAATGTGAAACTGCCTGATCCCGCTAAGGCAGCACACCTTCTCGGGCAAGCAGAGCCTGGTGCACCAAAGGATTCATCTATTTTTCCTCATTCCAGGGTCAGTCAATCGATGCCACCTGAATCAACTCGGTCTACTGGTTCACCCTCGAAGAACTTGTTCTCATCTGGTCCTCTGTATCAGGAGAGAAGTTCTCCATTGCATCCTCGTTCTACATCAGAAGGTTCCTTGCCTGGTATAGTTGGAACTAGGCAGGATTTGGATATTGAAAGAATATCACTAGCAAATTCTGAAGACAGGTCTGCTAACTTAGAAGAAAGGAGTACAGATCTAGATAGCCAACACTCTATGTCACCATCTCGAGATGAACTTCCTAATTTTATTGAAGTTGAGCAGTCATCTCAAAGCCATAATAGAACCGCGTCAGCTTCCAGCGTACTTTCCAATGCCAATTGTAGTCAAGGAACTCCAGTCAATGGCAATGGGGCCTTACAGGTATCGACCAGTCTGTCAGGCTACAGCAGTGATGCTTCTGGGGAGTTGAAATCAGAACCACAAACTGTTGCTACCTTGGCCCCCCAACAGAGACAAACTGAGTCGCCAACCAGAATAGTAGAGGCAAGACCTCGAAACCAAATGTGGCGCCGACCATCTAGCTTAATCCCGAGGATAGTTTCTTCTCCACCTATTGAAACAAGACCTGACCTTTCTGAACTTGAAGCCCAAGTTCGTAACCTGGTTGAGGACTTGAAAAGCACTTCACTTGATACACAAAGAGAGGCAACATTTCAACTCCGGTTACTTGCCAAACATAATATGGATAATCGGATTGTTATTGCAAGTTGTGGGGCCATTGGCTTGTTGGTGGATTTGCTCCGCTCTGCAGATACAAGAGTTCAGGAGAATGCTGTCACAGCACTTCTTAACTTATCAATCAATGATAACAACAAAACTGCAATTGCTACTGCCAATGCAATTGAACCTCTGATTCATGTCCTTGAGACAGGGAGTGCAGAGGCCAAGGAGAACTCAGCTGCCACTCTCTTCAGCCTTTCGGTGATCGAGGACAACAAGGTTCGCATTGGAAGGTCAGGGGCTATCAGGCCTCTGGTTGATTTATTGGGGAATGGGAGTCCGAGAGGGAGGAAAGATGCAGCCACAGCTTTGTTTAATTTGTCAATTTTTCATGAGAATAAGGGTCGAATTGTTCAAGCTGGTGCTGTTAAGTACCTAGTGGAGTTGATGGACCCAGCGGCTGGAATGGTTGACAAGGCAGTTGCTGTTTTGGCTAATCTTTCAACAATTCCTGATGGGAGGACAGCAATTGGTCAGGAGGGTGGGATCCCTGTTCTTGTCGAGGTTGTTGAATTGGGTTCTGCAAGAGGGAAGGAAAATGCAGCTGCTGCTCTTTTACAGCTCTGCACAAACAGTAATCGATATTGCAGTCAGGTTCTCCAAGAAGGAGCTGTCCCACCATTAGTAGTATTGTCACAATCTGGCACCCCAAGGGCCAAAGAGAAGGCGCAGACGCTCCTTAGCTACTTCAGAAACCATAGACAAGGTAATGCTGGTAGAGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

832

Amino Acids

90.59

Weight (kDa)

5.51

Isoelectric Point (pI)

50.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003836)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23140 AT2G23140 AT2G23140 AT2G23140 AT2G23140 AT5G67340 AT5G67340
fragaria_vesca	FvH4_1g17050 FvH4_1g17050 FvH4_1g17050 FvH4_1g17050
malus_domestica	MD02G1180700.v1.1 MD15G1291600.v1.1
prunus_persica	Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1
pyrus_communis	pycom02g14670 pycom15g25510
rosa_chinensis	RchiOBHm_Chr2g0107211
rosa_laevigata	RLG00000017560
rosa_multiflora	Rmu_co8148606.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136540
rosa_rugosa	Rorug02G0140900 Rorug02G0140900 Rorug02G0140900
rosa_samantha	Rh2AG191600 Rh2BG203600 Rh2CG196800 Rh2DG198900
rosa_wichuraiana	Rw2G015150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1423
Acc36I	ACCTGC	1 cut(s)	718
AccB1I	GGYRCC	2 cut(s)	1557, 2414
AccB7I	CCANNNNNTGG	2 cut(s)	1391, 2171
AccBSI	CCGCTC	1 cut(s)	1794
AccI	GTMKAC	1 cut(s)	1049
AccII	CGCG	1 cut(s)	1337
AciI	CCGC	5 cut(s)	353, 939, 1335, 1792, 2168
AclWI	GGATC	7 cut(s)	490, 746, 759, 815, 929, 2251, 2264
AcsI	RAATTY	2 cut(s)	407, 1201
AcuI	CTGAAG	5 cut(s)	132, 266, 1227, 1945, 2443
AcyI	GRCGYC	1 cut(s)	1558
AfaI	GTAC	5 cut(s)	98, 141, 1240, 1353, 2144
AfiI	CCNNNNNNNGG	5 cut(s)	736, 786, 1391, 1657, 2171
AjnI	CCWGG	6 cut(s)	321, 537, 973, 1010, 1147, 1650
Alw21I	GWGCWC	2 cut(s)	396, 982
Alw26I	GTCTC	2 cut(s)	1495, 1910
Alw44I	GTGCAC	1 cut(s)	978
AlwI	GGATC	7 cut(s)	490, 746, 759, 815, 929, 2251, 2264
AlwNI	CAGNNNCTG	4 cut(s)	974, 2171, 2195, 2318
Ama87I	CYCGRG	3 cut(s)	959, 1275, 1579
AoxI	GGCC	9 cut(s)	319, 517, 817, 1401, 1488, 1764, 1932, 2018, 2424
ApaLI	GTGCAC	1 cut(s)	978
ApoI	RAATTY	2 cut(s)	407, 1201
Asp700I	GAANNNNTTC	1 cut(s)	1073
AspLEI	GCGC	3 cut(s)	663, 1560, 2440
AspS9I	GGNCC	9 cut(s)	482, 517, 531, 1085, 1401, 1489, 1764, 2161, 2424
AsuC2I	CCSGG	1 cut(s)	86
AsuHPI	GGTGA	3 cut(s)	1050, 1260, 1984
AvaI	CYCGRG	3 cut(s)	959, 1275, 1579
AvaII	GGWCC	4 cut(s)	482, 531, 1085, 2161
BaeGI	GKGCMC	1 cut(s)	982
BaeI	ACNNNNGTAYC	2 cut(s)	1794, 1827
BamHI	GGATCC	2 cut(s)	751, 2256
BanI	GGYRCC	2 cut(s)	1557, 2414
BauI	CACGAG	1 cut(s)	656
BbsI	GAAGAC	4 cut(s)	140, 249, 350, 1215
Bbv12I	GWGCWC	2 cut(s)	396, 982
BccI	CCATC	4 cut(s)	1279, 1573, 2152, 2219
BceAI	ACGGC	1 cut(s)	857
BciT130I	CCWGG	6 cut(s)	323, 539, 975, 1012, 1149, 1652
BcnI	CCSGG	1 cut(s)	86
BcoDI	GTCTC	2 cut(s)	1495, 1910
BfaI	CTAG	6 cut(s)	500, 1164, 1196, 1247, 1569, 2147
BfmI	CTRYAG	4 cut(s)	558, 691, 1432, 1797
BfoI	RGCGCY	2 cut(s)	664, 1561
BfuAI	ACCTGC	1 cut(s)	718
BglII	AGATCT	1 cut(s)	1243
BmcAI	AGTACT	1 cut(s)	98
Bme1390I	CCNGG	7 cut(s)	86, 323, 539, 975, 1012, 1149, 1652
Bme18I	GGWCC	4 cut(s)	482, 531, 1085, 2161
BmeT110I	CYCGRG	3 cut(s)	959, 1275, 1579
BmgT120I	GGNCC	9 cut(s)	482, 517, 531, 1085, 1401, 1489, 1764, 2161, 2424
BmiI	GGNNCC	9 cut(s)	753, 1141, 1402, 1491, 1559, 1765, 2163, 2258, 2416
BmrFI	CCNGG	7 cut(s)	86, 323, 539, 975, 1012, 1149, 1652
BmrI	ACTGGG	1 cut(s)	215
BmuI	ACTGGG	1 cut(s)	215
BpiI	GAAGAC	4 cut(s)	140, 249, 350, 1215
BplI	GAGNNNNNCTC	2 cut(s)	1093, 1125
BpmI	CTGGAG	2 cut(s)	758, 1368
Bpu10I	CCTNAGC	3 cut(s)	521, 942, 2450
BpuEI	CTTGAG	3 cut(s)	410, 547, 1934
BpuMI	CCSGG	1 cut(s)	86
Bsa29I	ATCGAT	2 cut(s)	1025, 2350
BsaHI	GRCGYC	1 cut(s)	1558
BsaJI	CCNNGG	5 cut(s)	1011, 1485, 1580, 1935, 2420
BsaWI	WCCGGW	1 cut(s)	1710
Bsc4I	CCNNNNNNNGG	5 cut(s)	736, 786, 1391, 1657, 2171
Bse1I	ACTGG	7 cut(s)	210, 251, 755, 809, 1057, 1385, 1419
Bse3DI	GCAATG	3 cut(s)	150, 1112, 1402
BseBI	CCWGG	6 cut(s)	323, 539, 975, 1012, 1149, 1652
BseCI	ATCGAT	2 cut(s)	1025, 2350
BseDI	CCNNGG	5 cut(s)	1011, 1485, 1580, 1935, 2420
BseGI	GGATG	2 cut(s)	347, 1117
BseLI	CCNNNNNNNGG	5 cut(s)	736, 786, 1391, 1657, 2171
BseMI	GCAATG	3 cut(s)	150, 1112, 1402
BseMII	CTCAG	3 cut(s)	504, 1500, 1959
BseNI	ACTGG	7 cut(s)	210, 251, 755, 809, 1057, 1385, 1419
BseRI	GAGGAG	1 cut(s)	31
BseSI	GKGCMC	1 cut(s)	982
BseYI	CCCAGC	1 cut(s)	2164
BsgI	GTGCAG	2 cut(s)	1947, 2320
Bsh1236I	CGCG	1 cut(s)	1337
BshFI	GGCC	9 cut(s)	321, 519, 819, 1403, 1490, 1766, 1934, 2020, 2426
BshNI	GGYRCC	2 cut(s)	1557, 2414
BshVI	ATCGAT	2 cut(s)	1025, 2350
BsiHKAI	GWGCWC	2 cut(s)	396, 982
BsiHKCI	CYCGRG	3 cut(s)	959, 1275, 1579
BsiSI	CCGG	2 cut(s)	86, 1711
BslFI	GGGAC	1 cut(s)	2369
BslI	CCNNNNNNNGG	5 cut(s)	736, 786, 1391, 1657, 2171
BsmAI	GTCTC	2 cut(s)	1495, 1910
BsmFI	GGGAC	1 cut(s)	2369
BsmI	GAATGC	1 cut(s)	1825
BsnI	GGCC	9 cut(s)	321, 519, 819, 1403, 1490, 1766, 1934, 2020, 2426
BsoBI	CYCGRG	3 cut(s)	959, 1275, 1579
Bsp1286I	GDGCHC	2 cut(s)	396, 982
Bsp143I	GATC	9 cut(s)	463, 495, 751, 759, 807, 934, 1243, 1974, 2256
BspACI	CCGC	5 cut(s)	353, 939, 1335, 1792, 2168
BspANI	GGCC	9 cut(s)	321, 519, 819, 1403, 1490, 1766, 1934, 2020, 2426
BspCNI	CTCAG	3 cut(s)	503, 1501, 1958
BspDI	ATCGAT	2 cut(s)	1025, 2350
BspFNI	CGCG	1 cut(s)	1337
BspHI	TCATGA	2 cut(s)	64, 2101
BspLI	GGNNCC	9 cut(s)	753, 1141, 1402, 1491, 1559, 1765, 2163, 2258, 2416
BspMAI	CTGCAG	2 cut(s)	695, 1801
BspMI	ACCTGC	1 cut(s)	718
BspPI	GGATC	7 cut(s)	490, 746, 759, 815, 929, 2251, 2264
BspT107I	GGYRCC	2 cut(s)	1557, 2414
BsrBI	CCGCTC	1 cut(s)	1794
BsrDI	GCAATG	3 cut(s)	150, 1112, 1402
BsrI	ACTGG	7 cut(s)	210, 251, 755, 809, 1057, 1385, 1419
BssECI	CCNNGG	5 cut(s)	1011, 1485, 1580, 1935, 2420
BssMI	GATC	9 cut(s)	463, 495, 751, 759, 807, 934, 1243, 1974, 2256
BssNI	GRCGYC	1 cut(s)	1558
BssSI	CACGAG	1 cut(s)	656
BssT1I	CCWWGG	3 cut(s)	1485, 1935, 2420
Bst2BI	CACGAG	1 cut(s)	656
Bst2UI	CCWGG	6 cut(s)	323, 539, 975, 1012, 1149, 1652
Bst4CI	ACNGT	7 cut(s)	139, 339, 442, 826, 883, 1477, 2345
Bst6I	CTCTTC	2 cut(s)	108, 1964
BstACI	GRCGYC	1 cut(s)	1558
BstAPI	GCANNNNNTGC	2 cut(s)	896, 2318
BstC8I	GCNNGC	1 cut(s)	966
BstDEI	CTNAG	7 cut(s)	490, 521, 942, 1225, 1509, 1945, 2450
BstENI	CCTNNNNNAGG	2 cut(s)	784, 1655
BstF5I	GGATG	2 cut(s)	347, 1117
BstFNI	CGCG	1 cut(s)	1337
BstH2I	RGCGCY	2 cut(s)	664, 1561
BstHHI	GCGC	3 cut(s)	663, 1560, 2440
BstKTI	GATC	9 cut(s)	466, 498, 754, 762, 810, 937, 1246, 1977, 2259
BstMAI	GTCTC	2 cut(s)	1495, 1910
BstMBI	GATC	9 cut(s)	463, 495, 751, 759, 807, 934, 1243, 1974, 2256
BstMWI	GCNNNNNNNGC	9 cut(s)	190, 896, 947, 970, 1487, 1829, 2075, 2201, 2318
BstNI	CCWGG	6 cut(s)	323, 539, 975, 1012, 1149, 1652
BstSCI	CCNGG	7 cut(s)	84, 321, 537, 973, 1010, 1147, 1650
BstSFI	CTRYAG	4 cut(s)	558, 691, 1432, 1797
BstSLI	GKGCMC	1 cut(s)	982
BstUI	CGCG	1 cut(s)	1337
BstV2I	GAAGAC	4 cut(s)	140, 249, 350, 1215
BstX2I	RGATCY	4 cut(s)	495, 751, 1243, 2256
BstYI	RGATCY	4 cut(s)	495, 751, 1243, 2256
Bsu15I	ATCGAT	2 cut(s)	1025, 2350
BsuRI	GGCC	9 cut(s)	321, 519, 819, 1403, 1490, 1766, 1934, 2020, 2426
BsuTUI	ATCGAT	2 cut(s)	1025, 2350
BtsCI	GGATG	2 cut(s)	347, 1117
BtsI	GCAGTG	2 cut(s)	394, 1444
BtsIMutI	CAGTG	5 cut(s)	394, 762, 822, 879, 1444
BveI	ACCTGC	1 cut(s)	718
Cac8I	GCNNGC	1 cut(s)	966
CaiI	CAGNNNCTG	4 cut(s)	974, 2171, 2195, 2318
CciI	TCATGA	2 cut(s)	64, 2101
CfoI	GCGC	3 cut(s)	663, 1560, 2440
Cfr13I	GGNCC	9 cut(s)	482, 517, 531, 1085, 1401, 1489, 1764, 2161, 2424
ClaI	ATCGAT	2 cut(s)	1025, 2350
CseI	GACGC	2 cut(s)	1326, 2452
CsiI	ACCWGGT	1 cut(s)	1650
Csp6I	GTAC	5 cut(s)	97, 140, 1239, 1352, 2143
CviAII	CATG	4 cut(s)	65, 418, 1907, 2102
CviQI	GTAC	5 cut(s)	97, 140, 1239, 1352, 2143
DdeI	CTNAG	7 cut(s)	490, 521, 942, 1225, 1509, 1945, 2450
DinI	GGCGCC	1 cut(s)	1559
DpnI	GATC	9 cut(s)	465, 497, 753, 761, 809, 936, 1245, 1976, 2258
DpnII	GATC	9 cut(s)	463, 495, 751, 759, 807, 934, 1243, 1974, 2256
DrdI	GACNNNNNNGTC	1 cut(s)	1423
DseDI	GACNNNNNNGTC	1 cut(s)	1423
Eam1104I	CTCTTC	2 cut(s)	108, 1964
EarI	CTCTTC	2 cut(s)	108, 1964
Eco130I	CCWWGG	3 cut(s)	1485, 1935, 2420
Eco147I	AGGCCT	1 cut(s)	2020
Eco32I	GATATC	4 cut(s)	9, 300, 328, 636
Eco47I	GGWCC	4 cut(s)	482, 531, 1085, 2161
Eco57I	CTGAAG	5 cut(s)	132, 266, 1227, 1945, 2443
Eco88I	CYCGRG	3 cut(s)	959, 1275, 1579
EcoNI	CCTNNNNNAGG	2 cut(s)	784, 1655
EcoO109I	RGGNCCY	2 cut(s)	517, 1401
EcoRII	CCWGG	6 cut(s)	321, 537, 973, 1010, 1147, 1650
EcoRV	GATATC	4 cut(s)	9, 300, 328, 636
EcoT14I	CCWWGG	3 cut(s)	1485, 1935, 2420
EgeI	GGCGCC	1 cut(s)	1559
EheI	GGCGCC	1 cut(s)	1559
ErhI	CCWWGG	3 cut(s)	1485, 1935, 2420
FaeI	CATG	4 cut(s)	68, 421, 1910, 2105
FalI	AAGNNNNNCTT	4 cut(s)	12, 44, 258, 290
FaqI	GGGAC	1 cut(s)	2369
FatI	CATG	4 cut(s)	64, 417, 1906, 2101
FauI	CCCGC	2 cut(s)	360, 946
FblI	GTMKAC	1 cut(s)	1049
FokI	GGATG	2 cut(s)	334, 1104
FspBI	CTAG	6 cut(s)	500, 1164, 1196, 1247, 1569, 2147
GlaI	GCGC	3 cut(s)	662, 1559, 2439
GsaI	CCCAGC	1 cut(s)	2168
GsuI	CTGGAG	2 cut(s)	758, 1368
HaeII	RGCGCY	2 cut(s)	664, 1561
HaeIII	GGCC	9 cut(s)	321, 519, 819, 1403, 1490, 1766, 1934, 2020, 2426
HapII	CCGG	2 cut(s)	86, 1711
HgaI	GACGC	2 cut(s)	1326, 2452
HhaI	GCGC	3 cut(s)	663, 1560, 2440
Hin1I	GRCGYC	1 cut(s)	1558
Hin1II	CATG	4 cut(s)	68, 421, 1910, 2105
Hin6I	GCGC	3 cut(s)	661, 1558, 2438
HinP1I	GCGC	3 cut(s)	661, 1558, 2438
HincII	GTYRAC	2 cut(s)	438, 2182
HindII	GTYRAC	2 cut(s)	438, 2182
HindIII	AAGCTT	1 cut(s)	272
HinfI	GANTC	9 cut(s)	158, 290, 544, 911, 989, 1037, 1511, 1903, 2047
HpaII	CCGG	2 cut(s)	86, 1711
HphI	GGTGA	3 cut(s)	1050, 1260, 1984
Hpy166II	GTNNAC	5 cut(s)	438, 980, 1050, 1058, 2182
Hpy8I	GTNNAC	5 cut(s)	438, 980, 1050, 1058, 2182
HpyAV	CCTTC	8 cut(s)	571, 880, 965, 1130, 1995, 2296, 2369, 2428
HpyCH4III	ACNGT	7 cut(s)	139, 339, 442, 826, 883, 1477, 2345
HpyF10VI	GCNNNNNNNGC	9 cut(s)	190, 896, 947, 970, 1487, 1829, 2075, 2201, 2318
HpyF3I	CTNAG	7 cut(s)	490, 521, 942, 1225, 1509, 1945, 2450
Hsp92I	GRCGYC	1 cut(s)	1558
Hsp92II	CATG	4 cut(s)	68, 421, 1910, 2105
HspAI	GCGC	3 cut(s)	661, 1558, 2438
KasI	GGCGCC	1 cut(s)	1557
Kzo9I	GATC	9 cut(s)	463, 495, 751, 759, 807, 934, 1243, 1974, 2256
LmnI	GCTCC	5 cut(s)	232, 739, 1794, 2378, 2451
MabI	ACCWGGT	1 cut(s)	1650
MaeI	CTAG	6 cut(s)	500, 1164, 1196, 1247, 1569, 2147
MaeIII	GTNAC	6 cut(s)	643, 1266, 1646, 1713, 1825, 2403
MalI	GATC	9 cut(s)	465, 497, 753, 761, 809, 936, 1245, 1976, 2258
MbiI	CCGCTC	1 cut(s)	1794
MboI	GATC	9 cut(s)	463, 495, 751, 759, 807, 934, 1243, 1974, 2256
MfeI	CAATTG	4 cut(s)	1366, 1872, 1890, 2238
MflI	RGATCY	4 cut(s)	495, 751, 1243, 2256
MhlI	GDGCHC	2 cut(s)	396, 982
Mly113I	GGCGCC	1 cut(s)	1558
MlyI	GAGTC	4 cut(s)	299, 920, 1520, 2056
MmeI	TCCRAC	3 cut(s)	460, 558, 1138
MroXI	GAANNNNTTC	1 cut(s)	1073
MseI	TTAA	9 cut(s)	30, 122, 186, 411, 447, 1574, 1839, 2085, 2139
MspA1I	CMGCKG	3 cut(s)	1949, 2168, 2315
MspI	CCGG	2 cut(s)	86, 1711
MspR9I	CCNGG	7 cut(s)	86, 323, 539, 975, 1012, 1149, 1652
MunI	CAATTG	4 cut(s)	1366, 1872, 1890, 2238
Mva1269I	GAATGC	1 cut(s)	1825
MvaI	CCWGG	6 cut(s)	323, 539, 975, 1012, 1149, 1652
MvnI	CGCG	1 cut(s)	1337
MwoI	GCNNNNNNNGC	9 cut(s)	190, 896, 947, 970, 1487, 1829, 2075, 2201, 2318
NarI	GGCGCC	1 cut(s)	1558
NciI	CCSGG	1 cut(s)	86
NdeII	GATC	9 cut(s)	463, 495, 751, 759, 807, 934, 1243, 1974, 2256
NlaIII	CATG	4 cut(s)	68, 421, 1910, 2105
NlaIV	GGNNCC	9 cut(s)	753, 1141, 1402, 1491, 1559, 1765, 2163, 2258, 2416
NmuCI	GTSAC	3 cut(s)	1266, 1825, 2403
PaeR7I	CTCGAG	1 cut(s)	1275
PagI	TCATGA	2 cut(s)	64, 2101
PceI	AGGCCT	1 cut(s)	2020
PctI	GAATGC	1 cut(s)	1825
PdmI	GAANNNNTTC	1 cut(s)	1073
PfeI	GAWTC	5 cut(s)	158, 544, 989, 1037, 1903
PflMI	CCANNNNNTGG	2 cut(s)	1391, 2171
PleI	GAGTC	4 cut(s)	298, 919, 1519, 2055
PluTI	GGCGCC	1 cut(s)	1561
PpsI	GAGTC	4 cut(s)	298, 919, 1519, 2055
Psp6I	CCWGG	6 cut(s)	321, 537, 973, 1010, 1147, 1650
PspFI	CCCAGC	1 cut(s)	2164
PspGI	CCWGG	6 cut(s)	321, 537, 973, 1010, 1147, 1650
PspN4I	GGNNCC	9 cut(s)	753, 1141, 1402, 1491, 1559, 1765, 2163, 2258, 2416
PspPI	GGNCC	9 cut(s)	482, 517, 531, 1085, 1401, 1489, 1764, 2161, 2424
PstI	CTGCAG	2 cut(s)	695, 1801
PstNI	CAGNNNCTG	4 cut(s)	974, 2171, 2195, 2318
PsuI	RGATCY	4 cut(s)	495, 751, 1243, 2256
PvuII	CAGCTG	2 cut(s)	1949, 2315
RsaI	GTAC	5 cut(s)	98, 141, 1240, 1353, 2144
RsaNI	GTAC	5 cut(s)	97, 140, 1239, 1352, 2143
SaqAI	TTAA	9 cut(s)	30, 122, 186, 411, 447, 1574, 1839, 2085, 2139
Sau3AI	GATC	9 cut(s)	463, 495, 751, 759, 807, 934, 1243, 1974, 2256
Sau96I	GGNCC	9 cut(s)	482, 517, 531, 1085, 1401, 1489, 1764, 2161, 2424
ScaI	AGTACT	1 cut(s)	98
SchI	GAGTC	4 cut(s)	299, 920, 1520, 2056
ScrFI	CCNGG	7 cut(s)	86, 323, 539, 975, 1012, 1149, 1652
SduI	GDGCHC	2 cut(s)	396, 982
SexAI	ACCWGGT	1 cut(s)	1650
SfcI	CTRYAG	4 cut(s)	558, 691, 1432, 1797
SfoI	GGCGCC	1 cut(s)	1559
Sfr274I	CTCGAG	1 cut(s)	1275
SinI	GGWCC	4 cut(s)	482, 531, 1085, 2161
SlaI	CTCGAG	1 cut(s)	1275
SmlI	CTYRAG	4 cut(s)	389, 526, 1275, 1913
SmoI	CTYRAG	4 cut(s)	389, 526, 1275, 1913
SseBI	AGGCCT	1 cut(s)	2020
SsiI	CCGC	5 cut(s)	353, 939, 1335, 1792, 2168
SspDI	GGCGCC	1 cut(s)	1557
SspMI	CTAG	6 cut(s)	500, 1164, 1196, 1247, 1569, 2147
StuI	AGGCCT	1 cut(s)	2020
StyD4I	CCNGG	7 cut(s)	84, 321, 537, 973, 1010, 1147, 1650
StyI	CCWWGG	3 cut(s)	1485, 1935, 2420
TaaI	ACNGT	7 cut(s)	139, 339, 442, 826, 883, 1477, 2345
TaqI	TCGA	9 cut(s)	1025, 1064, 1276, 1415, 1543, 1977, 2116, 2271, 2350
TaqII	GACCGA	2 cut(s)	800, 1035
TatI	WGTACW	3 cut(s)	96, 139, 1238
TauI	GCSGC	1 cut(s)	2171
TfiI	GAWTC	5 cut(s)	158, 544, 989, 1037, 1903
Tru1I	TTAA	9 cut(s)	30, 122, 186, 411, 447, 1574, 1839, 2085, 2139
Tru9I	TTAA	9 cut(s)	30, 122, 186, 411, 447, 1574, 1839, 2085, 2139
TscAI	CASTG	5 cut(s)	401, 762, 829, 886, 1444
TseFI	GTSAC	3 cut(s)	1266, 1825, 2403
Tsp45I	GTSAC	3 cut(s)	1266, 1825, 2403
TspDTI	ATGAA	8 cut(s)	192, 384, 441, 784, 981, 1296, 1895, 2090
TspGWI	ACGGA	1 cut(s)	764
TspRI	CASTG	5 cut(s)	401, 762, 829, 886, 1444
Van91I	CCANNNNNTGG	2 cut(s)	1391, 2171
VneI	GTGCAC	1 cut(s)	978
VpaK11BI	GGWCC	4 cut(s)	482, 531, 1085, 2161
XagI	CCTNNNNNAGG	2 cut(s)	784, 1655
XapI	RAATTY	2 cut(s)	407, 1201
XbaI	TCTAGA	1 cut(s)	1246
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1729, 1774
XhoI	CTCGAG	1 cut(s)	1275
XmiI	GTMKAC	1 cut(s)	1049
XmnI	GAANNNNTTC	1 cut(s)	1073
XspI	CTAG	6 cut(s)	500, 1164, 1196, 1247, 1569, 2147
ZrmI	AGTACT	1 cut(s)	98

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.