Rh2CG196800

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0003836
Physical Location & Seq
Forward (+)
18784516 .. 18791692
7177 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG196800.1

Sequence Viewer

Length: 2523 bp
ATGGTGAATAAAGGTGGCATGGAGATAACGATGTTCAAAGCACTTCTTAATAAAATCTCCTCTTTTTTCCATTTTTCATCCCATGAGAACATAAATTTGGACCCTGTTCAGAAGTACTACAAAAAAACAGAAGAGATATTAAAATTGTTGAAGAATGTACTTGATGCCATTGTTGATTCTGAGATAGCTTCTTATGAAGTGCTTAATAAGCAATTTGAAGAACTGGGTCACTATGTTGATGAATTGAGGGAGCAATTTCAAGACTGGCAGCCATTGTTGAGTAAAGTGAATCTTGTTCTGCAAGTTGAATCATTGATATCAAAGATTTCGACTTGTAGCCTGGATGTCTTTCAGCTACTGAAGACTTCTGAGCAACATCTCCCTGATGAATTGGGTTCAGCATCTCTTGAGCCCTGCATACAGAAACTAAAGCATATGAGCTATGAGCAAACATCAACTGTCATTAAAGATGCTATAAGTGATCTAGTGGAGGGTATTGCGCCTAGCTCAGAGATCCTAGTGAAAATTGCAGAGGGCCTTAGCTTGAGGTCGAATCAGGAGATCCTTATCGAGGCTGTGGCACTCGAAAAGCTGAAGGAGAATGCTGAACAATCTGAAAAGATCGAGGAAGCAGAATATATTGAGCATATGATAGCCCTCGTCACTCGTATGCATGAGCGTCTTATTACGATAAAGCAGTCTGAAAGCTGCAGCGCAGTTCCAATACCTGCTGATTTCTGCTGTCCTCTCTCTCTGGAGCTGATGACAGATCCAGTGATTGTGGCATCAGGACAAACCTATGAGAGGACTTTCATCAAGAATTGGATTGATCTTGGCCTCACAGTTTGTCCTAAGACACGGCAGACTTTAGCTCACACCAATTTGATACCTAATTACACTGTAAAGGCACTGATTGCAAATTGGTGCGAGTCGAACAATGTGAAACTGCCTGATCCCACAAAGTCTGTGTGCTTAAATAAGCCAACACACCTCCTTGGACATGCAGAGCCTGGTGCGCCAAAGGACTTGCCTATTCTTCCTCATTCTAGGGTCAATTCATCAATGTCACCTGAGTCAACTCGATCTATGGGTTCCCCCACTAATAAATATATCTCATCTGGTGGATTGCATCGGGAAGGAAGTTCTCCATTCCATCCTCGTTCCGCATCAGAAGGTTCCTTGTCAGTAGCTGGAAATGGGCAGGTTTTGGATATCGCAAGAGTATCATCTACAAGTTCTGAAGATAGATCTGCCACTATAGACGAAAGGGGTACAGATCTAGTGAGCCAACAGTCTACATCACCATCCAGAAATGAATTTCCTATTACTACTGAAGCCAACCAGTCGTCACAAAACCATAATAGAAGTGCCTCAGCATCCAGCATACTTTCTAATACCAATGGTACTCGAGAAAATGCAGTAGATGCCGATGGGTCCTTACAGACATCAGGCAACCTGTCAGGCTACAGCAGTGATGCTTCTGGGGAGTTTAGATCAGGACCACCGGCTGCTACCCCTCAACACAGAGAAACTGAGTTGCCAACCAGATTGCCGGAGGCAAGACCTCGAAACCCAATGTGGCGCCGACCTTCTGGGAACTTAATCCCAAGGATAGTTTTGACTCCATCCACTGAAACAAGACCTGACCTTTCTGGACTAGAAGCCCAAGTTCGAACCCTGGTAGAGGACTTGAAAAGCACTTCACTTGATACTCAAAGAGAAGCAACATATGAACTCCGGATGCTTGCAAAGCATAATATGGATAATCGGATTGTTATTGCAAACTGTGGGGCCATTACCTTGTTGGTGGAATTACTCCGTTCTACAGATTCAAGGGTCCAGGAAAATTCTGTCACAGCACTTCTTAACTTGTCGATCAATGATAACAACAAAACTTTAATTGCTACTGCTAACGCAATTGAACCTCTTATTCATGTCCTTGAGACAGGGAGTGCTGAGGCCAAGGAGAACTCAGCCGCCACTCTGTTTAGCCTTTCGGTGATTGAGGATAACAAGGTTCGTATTGGAAGGTCAGGGGCTATTAGGCCTCTAGTTGATCTATTGGGGAATGGGACTCCTAGAGGGAGGAAAGATGCAGCCACGGCTTTGTTTAATTTGTCAATATTCCATGAGAACAAAGGTCGGATTGTTCAAGCTGGTGCTGTAAAGTACTTGGTGGAGTTAATGGACCCAGCTGCTGGAATGGTTGACAAGGCAGTTGCTGTTTTGGCTAATCTTTCTACAATTCCTGAAGGAAGGACGGCAATTGGTCAGGAGGGTGGGATCCCTGTTCTAGTTGAGGTGGTTGAGTTGGGTTCTGCTAGAGGGAAGGAGAATGCAGCTGCTGCTCTTTTACAGCTCTGCACAAATAGTAATAGGTATTGCAGTATGGTGCTCCAAGAAGGAGCTGTCCCGCCGTTAGTCGTATTGTCACAATCTGGCACCCCAAGGGCCAGAGAAAAGGCTCAGACACTACTTAGATACTTCAGAGACCATAGACATGGTAGTGCCGGTAGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

840

Amino Acids

91.59

Weight (kDa)

5.82

Isoelectric Point (pI)

44.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 8 - 146 1.6e-59 PUB2-like, N-terminal domain
U-box PF04564 242 - 312 5.2e-22 U-box domain
ARM_PUB PF25598 556 - 832 5.3e-29 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 557 - 729 2.9e-09 ARMC5
Arm PF00514 588 - 625 3e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 670 - 707 2.2e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 736, 1192
AccB1I GGYRCC 2 cut(s) 1581, 2441
AccB7I CCANNNNNTGG 1 cut(s) 2198
AccI GTMKAC 1 cut(s) 1295
AccIII TCCGGA 1 cut(s) 1737
AciI CCGC 3 cut(s) 1164, 1977, 2414
AclWI GGATC 6 cut(s) 508, 556, 764, 947, 2278, 2291
AcsI RAATTY 3 cut(s) 94, 1316, 1846
AcuI CTGAAG 6 cut(s) 380, 614, 1260, 1353, 2271, 2470
AcyI GRCGYC 1 cut(s) 1582
AfaI GTAC 5 cut(s) 116, 159, 1273, 1405, 2171
AfiI CCNNNNNNNGG 4 cut(s) 571, 804, 1684, 2198
AgsI TTSAA 9 cut(s) 37, 151, 218, 260, 308, 1693, 1833, 1922, 2153
AjnI CCWGG 4 cut(s) 339, 1009, 1677, 1839
AjuI GAANNNNNNNTTGG 2 cut(s) 80, 112
Alw21I GWGCWC 1 cut(s) 2397
Alw26I GTCTC 2 cut(s) 1937, 2484
AlwI GGATC 6 cut(s) 508, 556, 764, 947, 2278, 2291
AlwNI CAGNNNCTG 6 cut(s) 358, 1010, 1190, 2198, 2222, 2345
Ama87I CYCGRG 1 cut(s) 1407
Aor13HI TCCGGA 1 cut(s) 1737
AoxI GGCC 6 cut(s) 535, 835, 1791, 1959, 2045, 2451
ApeKI GCWGC 9 cut(s) 268, 708, 711, 1508, 2096, 2195, 2339, 2342, 2345
ApoI RAATTY 3 cut(s) 94, 1316, 1846
AspLEI GCGC 4 cut(s) 502, 716, 1018, 1584
AspS9I GGNCC 8 cut(s) 100, 535, 1434, 1499, 1791, 1837, 2188, 2451
AsuHPI GGTGA 4 cut(s) 16, 1059, 1293, 2011
AsuII TTCGAA 1 cut(s) 1672
AvaI CYCGRG 1 cut(s) 1407
AvaII GGWCC 5 cut(s) 100, 1434, 1499, 1837, 2188
BamHI GGATCC 1 cut(s) 2283
BanI GGYRCC 2 cut(s) 1581, 2441
BanII GRGCYC 1 cut(s) 414
BbsI GAAGAC 1 cut(s) 368
Bbv12I GWGCWC 1 cut(s) 2397
BbvCI CCTCAGC 2 cut(s) 1372, 1956
BbvI GCAGC 9 cut(s) 280, 695, 723, 1495, 2108, 2182, 2329, 2332, 2351
BccI CCATC 4 cut(s) 1161, 1312, 1424, 1633
BceAI ACGGC 4 cut(s) 875, 2118, 2277, 2401
BciT130I CCWGG 4 cut(s) 341, 1011, 1679, 1841
BcoDI GTCTC 2 cut(s) 1937, 2484
BfmI CTRYAG 4 cut(s) 709, 1257, 1465, 1824
BfoI RGCGCY 1 cut(s) 1585
BfuAI ACCTGC 2 cut(s) 736, 1192
BglII AGATCT 2 cut(s) 1247, 1276
BmcAI AGTACT 2 cut(s) 116, 2171
Bme1390I CCNGG 4 cut(s) 341, 1011, 1679, 1841
Bme18I GGWCC 5 cut(s) 100, 1434, 1499, 1837, 2188
BmeT110I CYCGRG 1 cut(s) 1407
BmgT120I GGNCC 8 cut(s) 100, 535, 1434, 1499, 1791, 1837, 2188, 2451
BmrFI CCNGG 4 cut(s) 341, 1011, 1679, 1841
BmrI ACTGGG 1 cut(s) 233
BmuI ACTGGG 1 cut(s) 233
BpiI GAAGAC 1 cut(s) 368
BpmI CTGGAG 1 cut(s) 776
Bpu10I CCTNAGC 3 cut(s) 539, 1372, 1956
Bpu14I TTCGAA 1 cut(s) 1672
BpuEI CTTGAG 3 cut(s) 428, 565, 1961
BsaBI GATNNNNATC 1 cut(s) 566
BsaHI GRCGYC 1 cut(s) 1582
BsaI GGTCTC 1 cut(s) 2484
BsaJI CCNNGG 6 cut(s) 994, 1607, 1677, 1962, 2100, 2447
BsaWI WCCGGW 1 cut(s) 1737
Bsc4I CCNNNNNNNGG 4 cut(s) 571, 804, 1684, 2198
Bse118I RCCGGY 2 cut(s) 1504, 2510
Bse1I ACTGG 4 cut(s) 228, 269, 773, 1342
Bse8I GATNNNNATC 1 cut(s) 566
BseAI TCCGGA 1 cut(s) 1737
BseBI CCWGG 4 cut(s) 341, 1011, 1679, 1841
BseDI CCNNGG 6 cut(s) 994, 1607, 1677, 1962, 2100, 2447
BseGI GGATG 7 cut(s) 77, 349, 1153, 1304, 1376, 1625, 1746
BseJI GATNNNNATC 1 cut(s) 566
BseLI CCNNNNNNNGG 4 cut(s) 571, 804, 1684, 2198
BseMII CTCAG 9 cut(s) 171, 360, 522, 1062, 1386, 1524, 1947, 1986, 2480
BseNI ACTGG 4 cut(s) 228, 269, 773, 1342
BseRI GAGGAG 1 cut(s) 49
BseXI GCAGC 9 cut(s) 280, 695, 723, 1495, 2108, 2182, 2329, 2332, 2351
BseYI CCCAGC 1 cut(s) 2191
BsgI GTGCAG 1 cut(s) 2347
BshFI GGCC 6 cut(s) 537, 837, 1793, 1961, 2047, 2453
BshNI GGYRCC 2 cut(s) 1581, 2441
BsiHKAI GWGCWC 1 cut(s) 2397
BsiHKCI CYCGRG 1 cut(s) 1407
BsiSI CCGG 4 cut(s) 1505, 1553, 1738, 2511
BslFI GGGAC 2 cut(s) 2086, 2396
BslI CCNNNNNNNGG 4 cut(s) 571, 804, 1684, 2198
BsmAI GTCTC 2 cut(s) 1937, 2484
BsmFI GGGAC 2 cut(s) 2086, 2396
BsmI GAATGC 2 cut(s) 607, 2341
BsnI GGCC 6 cut(s) 537, 837, 1793, 1961, 2047, 2453
Bso31I GGTCTC 1 cut(s) 2484
BsoBI CYCGRG 1 cut(s) 1407
Bsp119I TTCGAA 1 cut(s) 1672
Bsp1286I GDGCHC 2 cut(s) 414, 2397
Bsp13I TCCGGA 1 cut(s) 1737
BspACI CCGC 3 cut(s) 1164, 1977, 2414
BspANI GGCC 6 cut(s) 537, 837, 1793, 1961, 2047, 2453
BspCNI CTCAG 9 cut(s) 172, 361, 521, 1063, 1385, 1525, 1948, 1985, 2479
BspEI TCCGGA 1 cut(s) 1737
BspMAI CTGCAG 1 cut(s) 713
BspMI ACCTGC 2 cut(s) 736, 1192
BspPI GGATC 6 cut(s) 508, 556, 764, 947, 2278, 2291
BspT104I TTCGAA 1 cut(s) 1672
BspT107I GGYRCC 2 cut(s) 1581, 2441
BspTNI GGTCTC 1 cut(s) 2484
BsrFI RCCGGY 2 cut(s) 1504, 2510
BsrI ACTGG 4 cut(s) 228, 269, 773, 1342
BssAI RCCGGY 2 cut(s) 1504, 2510
BssECI CCNNGG 6 cut(s) 994, 1607, 1677, 1962, 2100, 2447
BssNI GRCGYC 1 cut(s) 1582
BssT1I CCWWGG 4 cut(s) 994, 1607, 1962, 2447
Bst2UI CCWGG 4 cut(s) 341, 1011, 1679, 1841
Bst4CI ACNGT 5 cut(s) 460, 844, 901, 1293, 1787
Bst6I CTCTTC 1 cut(s) 126
BstACI GRCGYC 1 cut(s) 1582
BstAPI GCANNNNNTGC 3 cut(s) 914, 1424, 2345
BstBI TTCGAA 1 cut(s) 1672
BstC8I GCNNGC 1 cut(s) 1746
BstDSI CCRYGG 1 cut(s) 2100
BstENI CCTNNNNNAGG 3 cut(s) 569, 802, 1682
BstF5I GGATG 7 cut(s) 77, 349, 1153, 1304, 1376, 1625, 1746
BstH2I RGCGCY 1 cut(s) 1585
BstHHI GCGC 4 cut(s) 502, 716, 1018, 1584
BstMAI GTCTC 2 cut(s) 1937, 2484
BstMWI GCNNNNNNNGC 8 cut(s) 208, 914, 1015, 1424, 1750, 2102, 2228, 2345
BstNI CCWGG 4 cut(s) 341, 1011, 1679, 1841
BstNSI RCATGY 1 cut(s) 1004
BstSCI CCNGG 4 cut(s) 339, 1009, 1677, 1839
BstSFI CTRYAG 4 cut(s) 709, 1257, 1465, 1824
BstV1I GCAGC 9 cut(s) 280, 695, 723, 1495, 2108, 2182, 2329, 2332, 2351
BstV2I GAAGAC 1 cut(s) 368
BstX2I RGATCY 6 cut(s) 513, 561, 769, 1247, 1276, 2283
BstXI CCANNNNNNTGG 1 cut(s) 2501
BstYI RGATCY 6 cut(s) 513, 561, 769, 1247, 1276, 2283
BsuRI GGCC 6 cut(s) 537, 837, 1793, 1961, 2047, 2453
BtgI CCRYGG 1 cut(s) 2100
BtsCI GGATG 7 cut(s) 77, 349, 1153, 1304, 1376, 1625, 1746
BtsI GCAGTG 1 cut(s) 1477
BtsIMutI CAGTG 5 cut(s) 780, 897, 908, 1477, 1629
BveI ACCTGC 2 cut(s) 736, 1192
Cac8I GCNNGC 1 cut(s) 1746
CaiI CAGNNNCTG 6 cut(s) 358, 1010, 1190, 2198, 2222, 2345
CfoI GCGC 4 cut(s) 502, 716, 1018, 1584
Cfr10I RCCGGY 2 cut(s) 1504, 2510
Cfr13I GGNCC 8 cut(s) 100, 535, 1434, 1499, 1791, 1837, 2188, 2451
CseI GACGC 1 cut(s) 668
Csp6I GTAC 5 cut(s) 115, 158, 1272, 1404, 2170
CviAII CATG 7 cut(s) 19, 83, 674, 1001, 1934, 2129, 2501
CviQI GTAC 5 cut(s) 115, 158, 1272, 1404, 2170
DinI GGCGCC 1 cut(s) 1583
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
Eco130I CCWWGG 4 cut(s) 994, 1607, 1962, 2447
Eco147I AGGCCT 1 cut(s) 2047
Eco24I GRGCYC 1 cut(s) 414
Eco31I GGTCTC 1 cut(s) 2484
Eco32I GATATC 2 cut(s) 318, 1213
Eco47I GGWCC 5 cut(s) 100, 1434, 1499, 1837, 2188
Eco57I CTGAAG 6 cut(s) 380, 614, 1260, 1353, 2271, 2470
Eco88I CYCGRG 1 cut(s) 1407
EcoNI CCTNNNNNAGG 3 cut(s) 569, 802, 1682
EcoO109I RGGNCCY 2 cut(s) 535, 1434
EcoRII CCWGG 4 cut(s) 339, 1009, 1677, 1839
EcoRV GATATC 2 cut(s) 318, 1213
EcoT14I CCWWGG 4 cut(s) 994, 1607, 1962, 2447
EcoT22I ATGCAT 1 cut(s) 675
EcoT38I GRGCYC 1 cut(s) 414
EgeI GGCGCC 1 cut(s) 1583
EheI GGCGCC 1 cut(s) 1583
ErhI CCWWGG 4 cut(s) 994, 1607, 1962, 2447
FaeI CATG 7 cut(s) 22, 86, 677, 1004, 1937, 2132, 2504
FalI AAGNNNNNCTT 4 cut(s) 30, 62, 276, 308
FaqI GGGAC 2 cut(s) 2086, 2396
FatI CATG 7 cut(s) 18, 82, 673, 1000, 1933, 2128, 2500
FauI CCCGC 1 cut(s) 2421
FauNDI CATATG 3 cut(s) 435, 648, 1729
FblI GTMKAC 1 cut(s) 1295
FokI GGATG 7 cut(s) 64, 356, 1140, 1291, 1363, 1612, 1753
FriOI GRGCYC 1 cut(s) 414
GlaI GCGC 4 cut(s) 501, 715, 1017, 1583
GsaI CCCAGC 1 cut(s) 2195
GsuI CTGGAG 1 cut(s) 776
HaeII RGCGCY 1 cut(s) 1585
HaeIII GGCC 6 cut(s) 537, 837, 1793, 1961, 2047, 2453
HapII CCGG 4 cut(s) 1505, 1553, 1738, 2511
HgaI GACGC 1 cut(s) 668
HhaI GCGC 4 cut(s) 502, 716, 1018, 1584
Hin1I GRCGYC 1 cut(s) 1582
Hin1II CATG 7 cut(s) 22, 86, 677, 1004, 1937, 2132, 2504
Hin6I GCGC 4 cut(s) 500, 714, 1016, 1582
HinP1I GCGC 4 cut(s) 500, 714, 1016, 1582
HincII GTYRAC 2 cut(s) 1077, 2209
HindII GTYRAC 2 cut(s) 1077, 2209
HinfI GANTC 9 cut(s) 176, 289, 308, 553, 929, 1073, 1621, 1829, 2074
HpaII CCGG 4 cut(s) 1505, 1553, 1738, 2511
HphI GGTGA 4 cut(s) 16, 1059, 1293, 2011
Hpy166II GTNNAC 3 cut(s) 1077, 1296, 2209
Hpy8I GTNNAC 3 cut(s) 1077, 1296, 2209
HpyAV CCTTC 9 cut(s) 589, 1130, 1166, 1599, 2022, 2246, 2250, 2323, 2396
HpyCH4III ACNGT 5 cut(s) 460, 844, 901, 1293, 1787
HpyF10VI GCNNNNNNNGC 8 cut(s) 208, 914, 1015, 1424, 1750, 2102, 2228, 2345
Hsp92I GRCGYC 1 cut(s) 1582
Hsp92II CATG 7 cut(s) 22, 86, 677, 1004, 1937, 2132, 2504
HspAI GCGC 4 cut(s) 500, 714, 1016, 1582
KasI GGCGCC 1 cut(s) 1581
Kpn2I TCCGGA 1 cut(s) 1737
LmnI GCTCC 4 cut(s) 250, 757, 2400, 2405
Lsp1109I GCAGC 9 cut(s) 280, 695, 723, 1495, 2108, 2182, 2329, 2332, 2351
MaeIII GTNAC 6 cut(s) 227, 661, 1065, 1347, 1852, 2430
MboII GAAGA 6 cut(s) 143, 163, 230, 373, 1028, 1253
MfeI CAATTG 2 cut(s) 1917, 2265
MflI RGATCY 6 cut(s) 513, 561, 769, 1247, 1276, 2283
MhlI GDGCHC 2 cut(s) 414, 2397
Mly113I GGCGCC 1 cut(s) 1582
MlyI GAGTC 4 cut(s) 938, 1082, 1615, 2068
MmeI TCCRAC 1 cut(s) 2123
Mph1103I ATGCAT 1 cut(s) 675
MroI TCCGGA 1 cut(s) 1737
MslI CAYNNNNRTG 3 cut(s) 668, 2499, 2505
MspA1I CMGCKG 2 cut(s) 2195, 2342
MspI CCGG 4 cut(s) 1505, 1553, 1738, 2511
MspR9I CCNGG 4 cut(s) 341, 1011, 1679, 1841
MunI CAATTG 2 cut(s) 1917, 2265
Mva1269I GAATGC 2 cut(s) 607, 2341
MvaI CCWGG 4 cut(s) 341, 1011, 1679, 1841
MwoI GCNNNNNNNGC 8 cut(s) 208, 914, 1015, 1424, 1750, 2102, 2228, 2345
NarI GGCGCC 1 cut(s) 1582
NdeI CATATG 3 cut(s) 435, 648, 1729
NlaIII CATG 7 cut(s) 22, 86, 677, 1004, 1937, 2132, 2504
NmuCI GTSAC 6 cut(s) 227, 661, 1065, 1347, 1852, 2430
NsiI ATGCAT 1 cut(s) 675
NspI RCATGY 1 cut(s) 1004
NspV TTCGAA 1 cut(s) 1672
PaeR7I CTCGAG 1 cut(s) 1407
PceI AGGCCT 1 cut(s) 2047
PctI GAATGC 2 cut(s) 607, 2341
PfeI GAWTC 5 cut(s) 176, 289, 308, 553, 1829
PflMI CCANNNNNTGG 1 cut(s) 2198
PfoI TCCNGGA 1 cut(s) 1839
PleI GAGTC 4 cut(s) 937, 1081, 1615, 2068
PluTI GGCGCC 1 cut(s) 1585
PpsI GAGTC 4 cut(s) 937, 1081, 1615, 2068
PpuMI RGGWCCY 1 cut(s) 1434
Psp5II RGGWCCY 1 cut(s) 1434
Psp6I CCWGG 4 cut(s) 339, 1009, 1677, 1839
PspFI CCCAGC 1 cut(s) 2191
PspGI CCWGG 4 cut(s) 339, 1009, 1677, 1839
PspPI GGNCC 8 cut(s) 100, 535, 1434, 1499, 1791, 1837, 2188, 2451
PspPPI RGGWCCY 1 cut(s) 1434
PstI CTGCAG 1 cut(s) 713
PstNI CAGNNNCTG 6 cut(s) 358, 1010, 1190, 2198, 2222, 2345
PsuI RGATCY 6 cut(s) 513, 561, 769, 1247, 1276, 2283
PvuII CAGCTG 2 cut(s) 2195, 2342
RsaI GTAC 5 cut(s) 116, 159, 1273, 1405, 2171
RsaNI GTAC 5 cut(s) 115, 158, 1272, 1404, 2170
RseI CAYNNNNRTG 3 cut(s) 668, 2499, 2505
Sau96I GGNCC 8 cut(s) 100, 535, 1434, 1499, 1791, 1837, 2188, 2451
ScaI AGTACT 2 cut(s) 116, 2171
SchI GAGTC 4 cut(s) 938, 1082, 1615, 2068
ScrFI CCNGG 4 cut(s) 341, 1011, 1679, 1841
SduI GDGCHC 2 cut(s) 414, 2397
SfcI CTRYAG 4 cut(s) 709, 1257, 1465, 1824
SfoI GGCGCC 1 cut(s) 1583
Sfr274I CTCGAG 1 cut(s) 1407
SfuI TTCGAA 1 cut(s) 1672
SinI GGWCC 5 cut(s) 100, 1434, 1499, 1837, 2188
SlaI CTCGAG 1 cut(s) 1407
SmiMI CAYNNNNRTG 3 cut(s) 668, 2499, 2505
SmlI CTYRAG 4 cut(s) 407, 544, 1407, 1940
SmoI CTYRAG 4 cut(s) 407, 544, 1407, 1940
SseBI AGGCCT 1 cut(s) 2047
SsiI CCGC 3 cut(s) 1164, 1977, 2414
SspDI GGCGCC 1 cut(s) 1581
SspI AATATT 1 cut(s) 2124
StuI AGGCCT 1 cut(s) 2047
StyD4I CCNGG 4 cut(s) 339, 1009, 1677, 1839
StyI CCWWGG 4 cut(s) 994, 1607, 1962, 2447
TaaI ACNGT 5 cut(s) 460, 844, 901, 1293, 1787
TatI WGTACW 3 cut(s) 114, 157, 2169
TauI GCSGC 1 cut(s) 1979
TfiI GAWTC 5 cut(s) 176, 289, 308, 553, 1829
TscAI CASTG 5 cut(s) 780, 904, 915, 1477, 1636
TseFI GTSAC 6 cut(s) 227, 661, 1065, 1347, 1852, 2430
TseI GCWGC 9 cut(s) 268, 708, 711, 1508, 2096, 2195, 2339, 2342, 2345
Tsp45I GTSAC 6 cut(s) 227, 661, 1065, 1347, 1852, 2430
TspDTI ATGAA 9 cut(s) 66, 210, 255, 402, 802, 1047, 1329, 1746, 1922
TspGWI ACGGA 1 cut(s) 1808
TspRI CASTG 5 cut(s) 780, 904, 915, 1477, 1636
Van91I CCANNNNNTGG 1 cut(s) 2198
VpaK11BI GGWCC 5 cut(s) 100, 1434, 1499, 1837, 2188
XagI CCTNNNNNAGG 3 cut(s) 569, 802, 1682
XapI RAATTY 3 cut(s) 94, 1316, 1846
XceI RCATGY 1 cut(s) 1004
XcmI CCANNNNNNNNNTGG 1 cut(s) 1801
XhoI CTCGAG 1 cut(s) 1407
XmiI GTMKAC 1 cut(s) 1295
ZrmI AGTACT 2 cut(s) 116, 2171
Zsp2I ATGCAT 1 cut(s) 675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.