Rh2DG198900

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0003836
Physical Location & Seq
Forward (+)
18305581 .. 18313135
7555 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG198900.1

Sequence Viewer

Length: 2502 bp
ATGGAGATATCGATGTTCAAAGCACTTCTTAATAAAATCTCCTCTTTTTTCCATTTTTCATCCCATGAGAACATAAATTTGGACCCTGTTCAGAAGTACTACAAAAAAACAGAAGAGATGTTAAAATTGTTGAAGAATGTACTTGATGCCATTGTTGATTCTGAGATAGCTTCTTATGAAGTGCTTAATAAGCCATTTGAAGAACTGGGTCACTATGTTGATGAATTGAGGGAGCAATTTCAAGACTGGCAGCCATTGTTGAGTAAAGTGAATCTTGTTCTGCAAGTTGAATCATTGATATCAAAGATTTCGACTTGTAGCCTGGATGTCTTTCAGCTGCTGAAGACTTCTGAGCAACATCTCCCTGATGAATTGGGTTCAGCATCTCTTGAGCTCTGCATACAGAAACTAAAGCATATGAGCTATGAGCAAACATCAACTGTCATTAAAGATGCTATAAGTGATCTAGTGGAGGGTATTGCGCCTAGCTCAGAGATCCTAGTGAAAATTGCAGAGGGCCTTAGCTTGAGGTCAAATCAGGAGATCCTTATCGAGGCTGTGGCACTCGAAAAGCTGAAGGAGAATGCTGAACAATCTGAAAAGATCGAGGAAGCAGAATATATTGAGCATATGATAGCCCTCGTCACTCGTATGCATGAGCGTCTTATTACGATAAAGCAGTCTGAAAGCTGCAGCGCAGTTCCAATACCTGCTGATTTCTGCTGTCCTCTCTCTCTGGAGCTGATGACAGATCCAGTGATTGTGGCATCAGGACAAACCTATGAGAGGACTTTCATCAAGAATTGGATTGATCTTGGCCTCACAGTTTGTCCTAAGACACGGCAGACTTTAGCTCACACCAATTTGATACCTAATTACACTGTAAAGGCACTGATTGCAAATTGGTGTGAGTCAAACAATGTGAAACTGCCTGATCCCACAAAGTCTGTGTGCTTAAATAAGCCAACACACCTTCTTGGACATGCAGAGCCTGGTGCGCCAAAGGACTCGCCTATTCTTCCTCATTCTAGGGTCAATTCATCAATGTCACCTGAGTCAACTCGATCTATGGGTTCCCCCACTAATAAATATATCTCATCTGGTGGATTGCATCGGGAAGGAAGTTCTCCATTCCATCCTCGTTCCGCATCAGAAGGTTCCTTGTCAGTAGCTGGAAATGGGCAGGTTTTGGATATCGCAAGAGTATCATCTACAAGTTCTGAAGACAGATCTGCCACTATAGACGAAAGGGGTACAGATCTAGTGAGCCAACAGTCTACATCACCATCCAGAAATGAATTTCCTATTACTACTGAAGCCAACCAGTCATCGCAAAACCATAATAGAAGTGCCTCAGCATCCAGCATACTTTCTAATACCAATGGTACTCGAGAAAATGCAGTAGATGCCGATGGGTCCTTACAGACATCAGGCAACCTGTCAGGCTACAGCAGTGATGCTTCTGGGGAGTTTAGATCAGGAACACCAGCTGCTACCCCTCAACATAGAGAAACTGAGTTGCCAACCAGATTGCCGGAGGCAAGACCTCGAAACCCAATGTGGCGCCGACCTTCTGGTAACTTAATCCCAAGGATTTTGACTCCATCCACTGAAACAAGACCTGACCTTTCTGGACTAGAAGCCCAAGTTCGAACTCTGGTAGAGGACTTGAAAAGCACTTCACTTGATACTCAAAGAGAAGCAACATATGAACTCCGGATGCTTGCAAAGCATAATATGGATAATCGGATTGTTATTGCAAACTGTGGGGCCATTACCTTGTTGGTGGAATTACTCCGTTCTACAGATTCAAGGGTCCAGGAAAATTCTGTCACAGCACTTCTTAACTTGTCGATCAATGATAACAACAAAACTTTAATTGCTACTGCTAACGCAATTGAACCTCTTATTCATGTCCTTGAGACAGGGAGTGCTGAGGCCAAGGAGAACTCAGCCGCCACTCTGTTTAGCCTTTCGGTGATTGAGGATAACAAGGTTCGTATTGGAAGGTCAGGGGCTATTAGGCCTCTAGTTGATCTATTGGGGAATGGGACTCCTAGAGGGAGGAAAGATGCTGCCACGGCTTTGTTTAATTTGTCAATATTCCATGAGAACAAAGGTCGGATTGTTCAAGCTGGTGCTGTAAAGTACTTGGTGGAGTTAATGGACCCAGCTGCTGGAATGGTTGACAAGGCCGTTGCTGTTTTGGCTAATCTTTCTACAATTCCTGAAGGAAGGACGGCAATTGGTCAGGAGGGTGGGATCCCTGTTCTAGTTGAGGTGGTTGAGTTGGGTTCTGCTAGAGGGAAGGAGAATGCAGCTGCTGCTCTTTTACAGCTCTGCACAAATAGTAATAGGTATTGCAGTATGGTGCTCCAAGAAGGAGCTGTCCCGCCGTTAGTCGTATTGTCACAATCTGGCACCCCAAGGGCCAGAGAAAAGGCTCAGACACTACTTAGATACTTCAGAGACCATAGACATGGTAGTGCCGGTAGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

833

Amino Acids

90.87

Weight (kDa)

5.77

Isoelectric Point (pI)

44.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 2 - 140 5.7e-59 PUB2-like, N-terminal domain
U-box PF04564 236 - 306 5.1e-22 U-box domain
ARM_PUB PF25598 549 - 825 5.2e-29 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 550 - 722 2.1e-09 ARMC5
Arm PF00514 581 - 618 2.9e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 663 - 700 2.2e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 718, 1174
AccB1I GGYRCC 2 cut(s) 1563, 2420
AccB7I CCANNNNNTGG 1 cut(s) 2177
AccI GTMKAC 1 cut(s) 1277
AccIII TCCGGA 1 cut(s) 1716
AciI CCGC 3 cut(s) 1146, 1956, 2393
AclWI GGATC 6 cut(s) 490, 538, 746, 929, 2257, 2270
AcsI RAATTY 3 cut(s) 76, 1298, 1825
AcuI CTGAAG 6 cut(s) 362, 596, 1242, 1335, 2250, 2449
AcyI GRCGYC 1 cut(s) 1564
AfaI GTAC 5 cut(s) 98, 141, 1255, 1387, 2150
AfiI CCNNNNNNNGG 3 cut(s) 553, 786, 2177
AgsI TTSAA 9 cut(s) 19, 133, 200, 242, 290, 1672, 1812, 1901, 2132
AjnI CCWGG 3 cut(s) 321, 991, 1818
AjuI GAANNNNNNNTTGG 2 cut(s) 62, 94
Alw21I GWGCWC 2 cut(s) 396, 2376
Alw26I GTCTC 2 cut(s) 1916, 2463
AlwI GGATC 6 cut(s) 490, 538, 746, 929, 2257, 2270
AlwNI CAGNNNCTG 5 cut(s) 340, 992, 1172, 2177, 2324
Ama87I CYCGRG 1 cut(s) 1389
Aor13HI TCCGGA 1 cut(s) 1716
AoxI GGCC 7 cut(s) 517, 817, 1770, 1938, 2024, 2193, 2430
ApoI RAATTY 3 cut(s) 76, 1298, 1825
AspLEI GCGC 4 cut(s) 484, 698, 1000, 1566
AspS9I GGNCC 7 cut(s) 82, 517, 1416, 1770, 1816, 2167, 2430
AsuHPI GGTGA 3 cut(s) 1041, 1275, 1990
AsuII TTCGAA 1 cut(s) 1651
AvaI CYCGRG 1 cut(s) 1389
AvaII GGWCC 4 cut(s) 82, 1416, 1816, 2167
BamHI GGATCC 1 cut(s) 2262
BanI GGYRCC 2 cut(s) 1563, 2420
BanII GRGCYC 1 cut(s) 396
BbsI GAAGAC 2 cut(s) 350, 1230
Bbv12I GWGCWC 2 cut(s) 396, 2376
BbvCI CCTCAGC 2 cut(s) 1354, 1935
BccI CCATC 4 cut(s) 1143, 1294, 1406, 1612
BceAI ACGGC 5 cut(s) 857, 2097, 2180, 2256, 2380
BciT130I CCWGG 3 cut(s) 323, 993, 1820
BcoDI GTCTC 2 cut(s) 1916, 2463
BfmI CTRYAG 4 cut(s) 691, 1239, 1447, 1803
BfoI RGCGCY 1 cut(s) 1567
BfuAI ACCTGC 2 cut(s) 718, 1174
BglII AGATCT 2 cut(s) 1229, 1258
BmcAI AGTACT 2 cut(s) 98, 2150
Bme1390I CCNGG 3 cut(s) 323, 993, 1820
Bme18I GGWCC 4 cut(s) 82, 1416, 1816, 2167
BmeT110I CYCGRG 1 cut(s) 1389
BmgT120I GGNCC 7 cut(s) 82, 517, 1416, 1770, 1816, 2167, 2430
BmrFI CCNGG 3 cut(s) 323, 993, 1820
BmrI ACTGGG 1 cut(s) 215
BmuI ACTGGG 1 cut(s) 215
BpiI GAAGAC 2 cut(s) 350, 1230
BpmI CTGGAG 1 cut(s) 758
Bpu10I CCTNAGC 3 cut(s) 521, 1354, 1935
Bpu14I TTCGAA 1 cut(s) 1651
BpuEI CTTGAG 3 cut(s) 410, 547, 1940
Bsa29I ATCGAT 1 cut(s) 11
BsaBI GATNNNNATC 1 cut(s) 548
BsaHI GRCGYC 1 cut(s) 1564
BsaI GGTCTC 1 cut(s) 2463
BsaJI CCNNGG 4 cut(s) 1589, 1941, 2079, 2426
BsaWI WCCGGW 1 cut(s) 1716
Bsc4I CCNNNNNNNGG 3 cut(s) 553, 786, 2177
Bse118I RCCGGY 1 cut(s) 2489
Bse1I ACTGG 4 cut(s) 210, 251, 755, 1324
Bse8I GATNNNNATC 1 cut(s) 548
BseAI TCCGGA 1 cut(s) 1716
BseBI CCWGG 3 cut(s) 323, 993, 1820
BseCI ATCGAT 1 cut(s) 11
BseDI CCNNGG 4 cut(s) 1589, 1941, 2079, 2426
BseGI GGATG 7 cut(s) 59, 331, 1135, 1286, 1358, 1604, 1725
BseJI GATNNNNATC 1 cut(s) 548
BseLI CCNNNNNNNGG 3 cut(s) 553, 786, 2177
BseMII CTCAG 9 cut(s) 153, 342, 504, 1044, 1368, 1506, 1926, 1965, 2459
BseNI ACTGG 4 cut(s) 210, 251, 755, 1324
BseRI GAGGAG 1 cut(s) 31
BseYI CCCAGC 1 cut(s) 2170
BsgI GTGCAG 1 cut(s) 2326
BshFI GGCC 7 cut(s) 519, 819, 1772, 1940, 2026, 2195, 2432
BshNI GGYRCC 2 cut(s) 1563, 2420
BshVI ATCGAT 1 cut(s) 11
BsiHKAI GWGCWC 2 cut(s) 396, 2376
BsiHKCI CYCGRG 1 cut(s) 1389
BsiSI CCGG 3 cut(s) 1535, 1717, 2490
BslFI GGGAC 2 cut(s) 2065, 2375
BslI CCNNNNNNNGG 3 cut(s) 553, 786, 2177
BsmAI GTCTC 2 cut(s) 1916, 2463
BsmFI GGGAC 2 cut(s) 2065, 2375
BsmI GAATGC 2 cut(s) 589, 2320
BsnI GGCC 7 cut(s) 519, 819, 1772, 1940, 2026, 2195, 2432
Bso31I GGTCTC 1 cut(s) 2463
BsoBI CYCGRG 1 cut(s) 1389
Bsp119I TTCGAA 1 cut(s) 1651
Bsp1286I GDGCHC 2 cut(s) 396, 2376
Bsp13I TCCGGA 1 cut(s) 1716
BspACI CCGC 3 cut(s) 1146, 1956, 2393
BspANI GGCC 7 cut(s) 519, 819, 1772, 1940, 2026, 2195, 2432
BspCNI CTCAG 9 cut(s) 154, 343, 503, 1045, 1367, 1507, 1927, 1964, 2458
BspDI ATCGAT 1 cut(s) 11
BspEI TCCGGA 1 cut(s) 1716
BspMAI CTGCAG 1 cut(s) 695
BspMI ACCTGC 2 cut(s) 718, 1174
BspPI GGATC 6 cut(s) 490, 538, 746, 929, 2257, 2270
BspT104I TTCGAA 1 cut(s) 1651
BspT107I GGYRCC 2 cut(s) 1563, 2420
BspTNI GGTCTC 1 cut(s) 2463
BsrFI RCCGGY 1 cut(s) 2489
BsrI ACTGG 4 cut(s) 210, 251, 755, 1324
BssAI RCCGGY 1 cut(s) 2489
BssECI CCNNGG 4 cut(s) 1589, 1941, 2079, 2426
BssNI GRCGYC 1 cut(s) 1564
BssT1I CCWWGG 3 cut(s) 1589, 1941, 2426
Bst2UI CCWGG 3 cut(s) 323, 993, 1820
Bst4CI ACNGT 5 cut(s) 442, 826, 883, 1275, 1766
Bst6I CTCTTC 1 cut(s) 108
BstACI GRCGYC 1 cut(s) 1564
BstAPI GCANNNNNTGC 3 cut(s) 896, 1406, 2324
BstBI TTCGAA 1 cut(s) 1651
BstC8I GCNNGC 1 cut(s) 1725
BstDSI CCRYGG 1 cut(s) 2079
BstENI CCTNNNNNAGG 2 cut(s) 551, 784
BstF5I GGATG 7 cut(s) 59, 331, 1135, 1286, 1358, 1604, 1725
BstH2I RGCGCY 1 cut(s) 1567
BstHHI GCGC 4 cut(s) 484, 698, 1000, 1566
BstMAI GTCTC 2 cut(s) 1916, 2463
BstMWI GCNNNNNNNGC 8 cut(s) 190, 896, 997, 1406, 1729, 2081, 2207, 2324
BstNI CCWGG 3 cut(s) 323, 993, 1820
BstNSI RCATGY 1 cut(s) 986
BstSCI CCNGG 3 cut(s) 321, 991, 1818
BstSFI CTRYAG 4 cut(s) 691, 1239, 1447, 1803
BstV2I GAAGAC 2 cut(s) 350, 1230
BstX2I RGATCY 6 cut(s) 495, 543, 751, 1229, 1258, 2262
BstXI CCANNNNNNTGG 1 cut(s) 2480
BstYI RGATCY 6 cut(s) 495, 543, 751, 1229, 1258, 2262
Bsu15I ATCGAT 1 cut(s) 11
BsuRI GGCC 7 cut(s) 519, 819, 1772, 1940, 2026, 2195, 2432
BsuTUI ATCGAT 1 cut(s) 11
BtgI CCRYGG 1 cut(s) 2079
BtgZI GCGATG 1 cut(s) 1314
BtsCI GGATG 7 cut(s) 59, 331, 1135, 1286, 1358, 1604, 1725
BtsI GCAGTG 1 cut(s) 1459
BtsIMutI CAGTG 5 cut(s) 762, 879, 890, 1459, 1608
BveI ACCTGC 2 cut(s) 718, 1174
Cac8I GCNNGC 1 cut(s) 1725
CaiI CAGNNNCTG 5 cut(s) 340, 992, 1172, 2177, 2324
CfoI GCGC 4 cut(s) 484, 698, 1000, 1566
Cfr10I RCCGGY 1 cut(s) 2489
Cfr13I GGNCC 7 cut(s) 82, 517, 1416, 1770, 1816, 2167, 2430
ClaI ATCGAT 1 cut(s) 11
CseI GACGC 1 cut(s) 650
Csp6I GTAC 5 cut(s) 97, 140, 1254, 1386, 2149
CviAII CATG 6 cut(s) 65, 656, 983, 1913, 2108, 2480
CviQI GTAC 5 cut(s) 97, 140, 1254, 1386, 2149
DinI GGCGCC 1 cut(s) 1565
Eam1104I CTCTTC 1 cut(s) 108
EarI CTCTTC 1 cut(s) 108
Ecl136II GAGCTC 1 cut(s) 394
Eco130I CCWWGG 3 cut(s) 1589, 1941, 2426
Eco147I AGGCCT 1 cut(s) 2026
Eco24I GRGCYC 1 cut(s) 396
Eco31I GGTCTC 1 cut(s) 2463
Eco32I GATATC 3 cut(s) 9, 300, 1195
Eco47I GGWCC 4 cut(s) 82, 1416, 1816, 2167
Eco53kI GAGCTC 1 cut(s) 394
Eco57I CTGAAG 6 cut(s) 362, 596, 1242, 1335, 2250, 2449
Eco88I CYCGRG 1 cut(s) 1389
EcoICRI GAGCTC 1 cut(s) 394
EcoNI CCTNNNNNAGG 2 cut(s) 551, 784
EcoO109I RGGNCCY 2 cut(s) 517, 1416
EcoRII CCWGG 3 cut(s) 321, 991, 1818
EcoRV GATATC 3 cut(s) 9, 300, 1195
EcoT14I CCWWGG 3 cut(s) 1589, 1941, 2426
EcoT22I ATGCAT 1 cut(s) 657
EcoT38I GRGCYC 1 cut(s) 396
EgeI GGCGCC 1 cut(s) 1565
EheI GGCGCC 1 cut(s) 1565
ErhI CCWWGG 3 cut(s) 1589, 1941, 2426
FaeI CATG 6 cut(s) 68, 659, 986, 1916, 2111, 2483
FalI AAGNNNNNCTT 4 cut(s) 12, 44, 258, 290
FaqI GGGAC 2 cut(s) 2065, 2375
FatI CATG 6 cut(s) 64, 655, 982, 1912, 2107, 2479
FauI CCCGC 1 cut(s) 2400
FauNDI CATATG 3 cut(s) 417, 630, 1708
FblI GTMKAC 1 cut(s) 1277
FokI GGATG 7 cut(s) 46, 338, 1122, 1273, 1345, 1591, 1732
FriOI GRGCYC 1 cut(s) 396
GlaI GCGC 4 cut(s) 483, 697, 999, 1565
GsaI CCCAGC 1 cut(s) 2174
GsuI CTGGAG 1 cut(s) 758
HaeII RGCGCY 1 cut(s) 1567
HaeIII GGCC 7 cut(s) 519, 819, 1772, 1940, 2026, 2195, 2432
HapII CCGG 3 cut(s) 1535, 1717, 2490
HgaI GACGC 1 cut(s) 650
HhaI GCGC 4 cut(s) 484, 698, 1000, 1566
Hin1I GRCGYC 1 cut(s) 1564
Hin1II CATG 6 cut(s) 68, 659, 986, 1916, 2111, 2483
Hin6I GCGC 4 cut(s) 482, 696, 998, 1564
HinP1I GCGC 4 cut(s) 482, 696, 998, 1564
HincII GTYRAC 2 cut(s) 1059, 2188
HindII GTYRAC 2 cut(s) 1059, 2188
HinfI GANTC 9 cut(s) 158, 271, 290, 911, 1007, 1055, 1600, 1808, 2053
HpaII CCGG 3 cut(s) 1535, 1717, 2490
HphI GGTGA 3 cut(s) 1041, 1275, 1990
Hpy166II GTNNAC 3 cut(s) 1059, 1278, 2188
Hpy8I GTNNAC 3 cut(s) 1059, 1278, 2188
HpyCH4III ACNGT 5 cut(s) 442, 826, 883, 1275, 1766
HpyF10VI GCNNNNNNNGC 8 cut(s) 190, 896, 997, 1406, 1729, 2081, 2207, 2324
Hsp92I GRCGYC 1 cut(s) 1564
Hsp92II CATG 6 cut(s) 68, 659, 986, 1916, 2111, 2483
HspAI GCGC 4 cut(s) 482, 696, 998, 1564
KasI GGCGCC 1 cut(s) 1563
Kpn2I TCCGGA 1 cut(s) 1716
LmnI GCTCC 4 cut(s) 232, 739, 2379, 2384
MaeIII GTNAC 6 cut(s) 209, 643, 1047, 1577, 1831, 2409
MboII GAAGA 6 cut(s) 125, 145, 212, 355, 1010, 1235
MfeI CAATTG 2 cut(s) 1896, 2244
MflI RGATCY 6 cut(s) 495, 543, 751, 1229, 1258, 2262
MhlI GDGCHC 2 cut(s) 396, 2376
Mly113I GGCGCC 1 cut(s) 1564
MlyI GAGTC 5 cut(s) 920, 1001, 1064, 1594, 2047
MmeI TCCRAC 1 cut(s) 2102
Mph1103I ATGCAT 1 cut(s) 657
MroI TCCGGA 1 cut(s) 1716
MslI CAYNNNNRTG 3 cut(s) 650, 2478, 2484
MspA1I CMGCKG 4 cut(s) 337, 1490, 2174, 2321
MspI CCGG 3 cut(s) 1535, 1717, 2490
MspR9I CCNGG 3 cut(s) 323, 993, 1820
MunI CAATTG 2 cut(s) 1896, 2244
Mva1269I GAATGC 2 cut(s) 589, 2320
MvaI CCWGG 3 cut(s) 323, 993, 1820
MwoI GCNNNNNNNGC 8 cut(s) 190, 896, 997, 1406, 1729, 2081, 2207, 2324
NarI GGCGCC 1 cut(s) 1564
NdeI CATATG 3 cut(s) 417, 630, 1708
NlaIII CATG 6 cut(s) 68, 659, 986, 1916, 2111, 2483
NmuCI GTSAC 5 cut(s) 209, 643, 1047, 1831, 2409
NsiI ATGCAT 1 cut(s) 657
NspI RCATGY 1 cut(s) 986
NspV TTCGAA 1 cut(s) 1651
PaeR7I CTCGAG 1 cut(s) 1389
PceI AGGCCT 1 cut(s) 2026
PctI GAATGC 2 cut(s) 589, 2320
PfeI GAWTC 4 cut(s) 158, 271, 290, 1808
PflMI CCANNNNNTGG 1 cut(s) 2177
PfoI TCCNGGA 1 cut(s) 1818
PleI GAGTC 5 cut(s) 919, 1001, 1063, 1594, 2047
PluTI GGCGCC 1 cut(s) 1567
PpsI GAGTC 5 cut(s) 919, 1001, 1063, 1594, 2047
PpuMI RGGWCCY 1 cut(s) 1416
Psp124BI GAGCTC 1 cut(s) 396
Psp5II RGGWCCY 1 cut(s) 1416
Psp6I CCWGG 3 cut(s) 321, 991, 1818
PspFI CCCAGC 1 cut(s) 2170
PspGI CCWGG 3 cut(s) 321, 991, 1818
PspPI GGNCC 7 cut(s) 82, 517, 1416, 1770, 1816, 2167, 2430
PspPPI RGGWCCY 1 cut(s) 1416
PstI CTGCAG 1 cut(s) 695
PstNI CAGNNNCTG 5 cut(s) 340, 992, 1172, 2177, 2324
PsuI RGATCY 6 cut(s) 495, 543, 751, 1229, 1258, 2262
PvuII CAGCTG 4 cut(s) 337, 1490, 2174, 2321
RsaI GTAC 5 cut(s) 98, 141, 1255, 1387, 2150
RsaNI GTAC 5 cut(s) 97, 140, 1254, 1386, 2149
RseI CAYNNNNRTG 3 cut(s) 650, 2478, 2484
SacI GAGCTC 1 cut(s) 396
Sau96I GGNCC 7 cut(s) 82, 517, 1416, 1770, 1816, 2167, 2430
ScaI AGTACT 2 cut(s) 98, 2150
SchI GAGTC 5 cut(s) 920, 1001, 1064, 1594, 2047
ScrFI CCNGG 3 cut(s) 323, 993, 1820
SduI GDGCHC 2 cut(s) 396, 2376
SfcI CTRYAG 4 cut(s) 691, 1239, 1447, 1803
SfoI GGCGCC 1 cut(s) 1565
Sfr274I CTCGAG 1 cut(s) 1389
SfuI TTCGAA 1 cut(s) 1651
SinI GGWCC 4 cut(s) 82, 1416, 1816, 2167
SlaI CTCGAG 1 cut(s) 1389
SmiMI CAYNNNNRTG 3 cut(s) 650, 2478, 2484
SmlI CTYRAG 4 cut(s) 389, 526, 1389, 1919
SmoI CTYRAG 4 cut(s) 389, 526, 1389, 1919
SseBI AGGCCT 1 cut(s) 2026
SsiI CCGC 3 cut(s) 1146, 1956, 2393
SspDI GGCGCC 1 cut(s) 1563
SspI AATATT 1 cut(s) 2103
SstI GAGCTC 1 cut(s) 396
StuI AGGCCT 1 cut(s) 2026
StyD4I CCNGG 3 cut(s) 321, 991, 1818
StyI CCWWGG 3 cut(s) 1589, 1941, 2426
TaaI ACNGT 5 cut(s) 442, 826, 883, 1275, 1766
TatI WGTACW 3 cut(s) 96, 139, 2148
TauI GCSGC 1 cut(s) 1958
TfiI GAWTC 4 cut(s) 158, 271, 290, 1808
TscAI CASTG 5 cut(s) 762, 886, 897, 1459, 1615
TseFI GTSAC 5 cut(s) 209, 643, 1047, 1831, 2409
Tsp45I GTSAC 5 cut(s) 209, 643, 1047, 1831, 2409
TspDTI ATGAA 9 cut(s) 48, 192, 237, 384, 784, 1029, 1311, 1725, 1901
TspGWI ACGGA 1 cut(s) 1787
TspRI CASTG 5 cut(s) 762, 886, 897, 1459, 1615
Van91I CCANNNNNTGG 1 cut(s) 2177
VpaK11BI GGWCC 4 cut(s) 82, 1416, 1816, 2167
XagI CCTNNNNNAGG 2 cut(s) 551, 784
XapI RAATTY 3 cut(s) 76, 1298, 1825
XceI RCATGY 1 cut(s) 986
XcmI CCANNNNNNNNNTGG 1 cut(s) 1780
XhoI CTCGAG 1 cut(s) 1389
XmiI GTMKAC 1 cut(s) 1277
ZrmI AGTACT 2 cut(s) 98, 2150
Zsp2I ATGCAT 1 cut(s) 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.