Rh2BG203600

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0003836
Physical Location & Seq
Forward (+)
18823910 .. 18831500
7591 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG203600.1

Sequence Viewer

Length: 2088 bp
ATGAGCTATGAGCAAACATCAACTGTCATTAAAGATGCTATAAGTGATCTAGTGGAGGGTATTGCGCCTAGCTCAGAGATCCTAGTGAAAATTGCAGAGGGCCTTAGCTTGAGGTCGAATCAGGAGATCCTTATCGAGGCTGTGGCACTCGAAAAGCTGAAGGAGAATGCTGAACAATCTGAAAAGATCGAGGAAGCAGAATATATTGAGCATATGATAGCCCTCGTCACTCGTATGCATGAGCGTCTTATTACGATAAAGCAGTCTGAAAGCTGCAGCGCAGTTCCAATACCTGCTGATTTCTGCTGTCCTCTCTCTCTGGAGCTGATGACAGATCCAGTGATTGTGGCATCAGGGCAAACCTATGAGAGGACTTTCATCAAGAATTGGATTGATCTTGGCCTCACAGTTTGTCCTAAGACACGGCAGACTTTAGCTCACACCAATTTGATACCTAATTACACTGTAAAGGCACTGATTGCAAATTGGTGCGAGTCAAACAATGTGAAACTGCCTGATCCCACAAAGTCTGTGTGCTTAAATAAGCCAACACACCTTCTTGGACATGCAGAGCCTGGTGCGCCAAAGGACTCGCCTATTCTTCCTCATTCTAGGGTCAATTCATCAATGTCACCTGAGTCAACTCGATCTATGGGTTCCCCCACTAATAAATATATCTCATCTGGTGGATTGCATCGGGAAGGAAGTTCTCCATTCCATCCTCGTTCCGCATCAGAAGGTTCCTTGTCAGTAGCTGGAAATGGGCAGGTTTTGGATATCGCAAGAGTATCATCTACAAGTTCTGAAGACAGATCTGCCACTATAGACGAAAGGGGTACAGATCTAGTGAGCCAACAGTCTACATCACCATCCAGAAATGAATTTCCTATTACTACTGAAGCCAACCAGTTGTCGCAAAACCATAATAGAAGTGCCTCAGCATCCAGCATACTTTCTAATACCAATGGTACTCGAGAAAATGCAGTAGATGCCGATGGGTCCTTACAGACATCAGGCAACCTGTCAGGCTACAGCAGTGATGCTTCTGGGGAGTTTAGATCAGGACCACCGGCTGCTACCCCTCAACACAGAGAAACTGAGTTGCCAACCAGATTGCCGGAGGCAAGACCTCGAAACCCAATGTGGCGCCGATCTTCTGGGAACTTAATCCCAAGGATAGTTTTTAGTCCATCCACTGAAACAAGACCTGACCTTTCTGGACTAGAAGCCCAAGTTCGAACTCTGGTAGAGGACTTGAAAAGCACTTCACTTGATACTCAAAGAGAAGCAACATATGAACTCCGGATGCTTGCAAAGCATAATATGGATAATCGGATTGTTATTGCAAACTGTGGGGCCATTACCTTGTTGGTGGAATTACTCCGTTCTACAGATTCAAGGGTCCAGGAAAATTCTGTCACAGCACTTCTTAACTTGTCGATCAATGATAACAACAAAACTTTAATTGCTACTGCTAACGCAATTGAACCTCTTATTCATGTCCTTGAGACAGGGAGTGCTGAGGCCAAGGAGAACTCAGCCGCCACTCTGTTTAGCCTTTCGGTAATTGAGGATAACAAGGTTCGTATTGGAAGGTCAGGGGCTATTAGGCCTCTAGTTGATCTATTGGGGAATGGGACTCCTAGAGGGAGGAAAGATGCAGCCACGGCTTTGTTTAATTTGTCAATATTCCATGAGAACAAAGGTCGGATTGTTCAAGCTGGTGCTGTAAAGTACTTGGTGGAGTTAATGGACCCAGCTGCTGGAATGGTTGACAAGGCAGTTGCTGTTTTGGCTAATCTTTCTACAATTCCTGAAGGAAGGACGGCAATTGGTCAGGAGGGTGGGATCCCTGTTCTAGTTGAGGTGGTTGAGTTGGGTTCTGCTAGAGGGAAGGAGAATGCAGCTGCTGCTCTTTTACAGCTCTGCACAAATAGTAATAGGTATTGCAGTATGGTGCTCCAAGAAGGAGCTGTCCCGCCGTTAGTCGTATTGTCACAATCTGGCACCCCAAGGGCCAGAGAAAAGGCTCAGACACTACTTAGATACTTCAGAGACCATAGACATGGTAGTGCCGGTAGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

695

Amino Acids

74.9

Weight (kDa)

6.0

Isoelectric Point (pI)

45.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
U-box PF04564 97 - 167 4e-22 U-box domain
ARM_PUB PF25598 411 - 687 3.5e-29 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 412 - 584 1.4e-09 ARMC5
Arm PF00514 443 - 480 2.4e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 525 - 562 1.8e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 301, 757
AccB1I GGYRCC 2 cut(s) 1146, 2006
AccB7I CCANNNNNTGG 1 cut(s) 1763
AccI GTMKAC 1 cut(s) 860
AccIII TCCGGA 1 cut(s) 1302
AciI CCGC 3 cut(s) 729, 1542, 1979
AclWI GGATC 6 cut(s) 73, 121, 329, 512, 1843, 1856
AcsI RAATTY 2 cut(s) 881, 1411
AcuI CTGAAG 5 cut(s) 179, 825, 918, 1836, 2035
AcyI GRCGYC 1 cut(s) 1147
AfaI GTAC 3 cut(s) 838, 970, 1736
AfiI CCNNNNNNNGG 3 cut(s) 136, 369, 1763
AgsI TTSAA 4 cut(s) 1258, 1398, 1487, 1718
AjnI CCWGG 2 cut(s) 574, 1404
Alw21I GWGCWC 1 cut(s) 1962
Alw26I GTCTC 2 cut(s) 1502, 2049
AlwI GGATC 6 cut(s) 73, 121, 329, 512, 1843, 1856
AlwNI CAGNNNCTG 5 cut(s) 575, 755, 1763, 1787, 1910
Ama87I CYCGRG 1 cut(s) 972
Aor13HI TCCGGA 1 cut(s) 1302
AoxI GGCC 6 cut(s) 100, 400, 1356, 1524, 1610, 2016
ApeKI GCWGC 8 cut(s) 273, 276, 1073, 1661, 1760, 1904, 1907, 1910
ApoI RAATTY 2 cut(s) 881, 1411
AspLEI GCGC 4 cut(s) 67, 281, 583, 1149
AspS9I GGNCC 7 cut(s) 100, 999, 1064, 1356, 1402, 1753, 2016
AsuHPI GGTGA 2 cut(s) 624, 858
AsuII TTCGAA 1 cut(s) 1237
AvaI CYCGRG 1 cut(s) 972
AvaII GGWCC 4 cut(s) 999, 1064, 1402, 1753
BamHI GGATCC 1 cut(s) 1848
BanI GGYRCC 2 cut(s) 1146, 2006
BbsI GAAGAC 1 cut(s) 813
Bbv12I GWGCWC 1 cut(s) 1962
BbvCI CCTCAGC 2 cut(s) 937, 1521
BbvI GCAGC 8 cut(s) 260, 288, 1060, 1673, 1747, 1894, 1897, 1916
BccI CCATC 4 cut(s) 726, 877, 989, 1198
BceAI ACGGC 4 cut(s) 440, 1683, 1842, 1966
BciT130I CCWGG 2 cut(s) 576, 1406
BcoDI GTCTC 2 cut(s) 1502, 2049
BfmI CTRYAG 4 cut(s) 274, 822, 1030, 1389
BfoI RGCGCY 1 cut(s) 1150
BfuAI ACCTGC 2 cut(s) 301, 757
BglII AGATCT 2 cut(s) 812, 841
BisI GCNGC 9 cut(s) 274, 277, 1074, 1542, 1662, 1761, 1905, 1908, 1911
BlsI GCNGC 9 cut(s) 275, 278, 1075, 1543, 1663, 1762, 1906, 1909, 1912
BmcAI AGTACT 1 cut(s) 1736
Bme1390I CCNGG 2 cut(s) 576, 1406
Bme18I GGWCC 4 cut(s) 999, 1064, 1402, 1753
BmeT110I CYCGRG 1 cut(s) 972
BmgT120I GGNCC 7 cut(s) 100, 999, 1064, 1356, 1402, 1753, 2016
BmiI GGNNCC 9 cut(s) 658, 742, 1000, 1148, 1357, 1403, 1755, 1850, 2008
BmrFI CCNGG 2 cut(s) 576, 1406
BmsI GCATC 9 cut(s) 25, 359, 703, 740, 950, 979, 1030, 1296, 1648
BpiI GAAGAC 1 cut(s) 813
BpmI CTGGAG 1 cut(s) 341
Bpu10I CCTNAGC 3 cut(s) 104, 937, 1521
Bpu14I TTCGAA 1 cut(s) 1237
BpuEI CTTGAG 2 cut(s) 130, 1526
BsaBI GATNNNNATC 1 cut(s) 131
BsaHI GRCGYC 1 cut(s) 1147
BsaI GGTCTC 1 cut(s) 2049
BsaJI CCNNGG 4 cut(s) 1172, 1527, 1665, 2012
BsaWI WCCGGW 1 cut(s) 1302
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 369, 1763
Bse118I RCCGGY 2 cut(s) 1069, 2075
Bse1I ACTGG 2 cut(s) 338, 907
Bse8I GATNNNNATC 1 cut(s) 131
BseAI TCCGGA 1 cut(s) 1302
BseBI CCWGG 2 cut(s) 576, 1406
BseDI CCNNGG 4 cut(s) 1172, 1527, 1665, 2012
BseGI GGATG 5 cut(s) 718, 869, 941, 1190, 1311
BseJI GATNNNNATC 1 cut(s) 131
BseLI CCNNNNNNNGG 3 cut(s) 136, 369, 1763
BseMII CTCAG 7 cut(s) 87, 627, 951, 1089, 1512, 1551, 2045
BseNI ACTGG 2 cut(s) 338, 907
BseXI GCAGC 8 cut(s) 260, 288, 1060, 1673, 1747, 1894, 1897, 1916
BseYI CCCAGC 1 cut(s) 1756
BsgI GTGCAG 1 cut(s) 1912
BshFI GGCC 6 cut(s) 102, 402, 1358, 1526, 1612, 2018
BshNI GGYRCC 2 cut(s) 1146, 2006
BsiHKAI GWGCWC 1 cut(s) 1962
BsiHKCI CYCGRG 1 cut(s) 972
BsiSI CCGG 4 cut(s) 1070, 1118, 1303, 2076
BslFI GGGAC 2 cut(s) 1651, 1961
BslI CCNNNNNNNGG 3 cut(s) 136, 369, 1763
BsmAI GTCTC 2 cut(s) 1502, 2049
BsmFI GGGAC 2 cut(s) 1651, 1961
BsmI GAATGC 2 cut(s) 172, 1906
BsnI GGCC 6 cut(s) 102, 402, 1358, 1526, 1612, 2018
Bso31I GGTCTC 1 cut(s) 2049
BsoBI CYCGRG 1 cut(s) 972
Bsp119I TTCGAA 1 cut(s) 1237
Bsp1286I GDGCHC 1 cut(s) 1962
Bsp13I TCCGGA 1 cut(s) 1302
BspACI CCGC 3 cut(s) 729, 1542, 1979
BspANI GGCC 6 cut(s) 102, 402, 1358, 1526, 1612, 2018
BspCNI CTCAG 7 cut(s) 86, 628, 950, 1090, 1513, 1550, 2044
BspEI TCCGGA 1 cut(s) 1302
BspLI GGNNCC 9 cut(s) 658, 742, 1000, 1148, 1357, 1403, 1755, 1850, 2008
BspMAI CTGCAG 1 cut(s) 278
BspMI ACCTGC 2 cut(s) 301, 757
BspPI GGATC 6 cut(s) 73, 121, 329, 512, 1843, 1856
BspT104I TTCGAA 1 cut(s) 1237
BspT107I GGYRCC 2 cut(s) 1146, 2006
BspTNI GGTCTC 1 cut(s) 2049
BsrFI RCCGGY 2 cut(s) 1069, 2075
BsrI ACTGG 2 cut(s) 338, 907
BssAI RCCGGY 2 cut(s) 1069, 2075
BssECI CCNNGG 4 cut(s) 1172, 1527, 1665, 2012
BssNI GRCGYC 1 cut(s) 1147
BssT1I CCWWGG 3 cut(s) 1172, 1527, 2012
Bst2UI CCWGG 2 cut(s) 576, 1406
Bst4CI ACNGT 5 cut(s) 25, 409, 466, 858, 1352
BstACI GRCGYC 1 cut(s) 1147
BstAPI GCANNNNNTGC 3 cut(s) 479, 989, 1910
BstBI TTCGAA 1 cut(s) 1237
BstC8I GCNNGC 1 cut(s) 1311
BstDSI CCRYGG 1 cut(s) 1665
BstENI CCTNNNNNAGG 2 cut(s) 134, 367
BstF5I GGATG 5 cut(s) 718, 869, 941, 1190, 1311
BstH2I RGCGCY 1 cut(s) 1150
BstHHI GCGC 4 cut(s) 67, 281, 583, 1149
BstMAI GTCTC 2 cut(s) 1502, 2049
BstMWI GCNNNNNNNGC 7 cut(s) 479, 580, 989, 1315, 1667, 1793, 1910
BstNI CCWGG 2 cut(s) 576, 1406
BstNSI RCATGY 1 cut(s) 569
BstSCI CCNGG 2 cut(s) 574, 1404
BstSFI CTRYAG 4 cut(s) 274, 822, 1030, 1389
BstV1I GCAGC 8 cut(s) 260, 288, 1060, 1673, 1747, 1894, 1897, 1916
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 6 cut(s) 78, 126, 334, 812, 841, 1848
BstXI CCANNNNNNTGG 1 cut(s) 2066
BstYI RGATCY 6 cut(s) 78, 126, 334, 812, 841, 1848
BsuRI GGCC 6 cut(s) 102, 402, 1358, 1526, 1612, 2018
BtgI CCRYGG 1 cut(s) 1665
BtsCI GGATG 5 cut(s) 718, 869, 941, 1190, 1311
BtsI GCAGTG 1 cut(s) 1042
BtsIMutI CAGTG 5 cut(s) 345, 462, 473, 1042, 1194
BveI ACCTGC 2 cut(s) 301, 757
Cac8I GCNNGC 1 cut(s) 1311
CaiI CAGNNNCTG 5 cut(s) 575, 755, 1763, 1787, 1910
CfoI GCGC 4 cut(s) 67, 281, 583, 1149
Cfr10I RCCGGY 2 cut(s) 1069, 2075
Cfr13I GGNCC 7 cut(s) 100, 999, 1064, 1356, 1402, 1753, 2016
CseI GACGC 1 cut(s) 233
Csp6I GTAC 3 cut(s) 837, 969, 1735
CviAII CATG 5 cut(s) 239, 566, 1499, 1694, 2066
CviQI GTAC 3 cut(s) 837, 969, 1735
DinI GGCGCC 1 cut(s) 1148
Eco130I CCWWGG 3 cut(s) 1172, 1527, 2012
Eco147I AGGCCT 1 cut(s) 1612
Eco31I GGTCTC 1 cut(s) 2049
Eco32I GATATC 1 cut(s) 778
Eco47I GGWCC 4 cut(s) 999, 1064, 1402, 1753
Eco57I CTGAAG 5 cut(s) 179, 825, 918, 1836, 2035
Eco88I CYCGRG 1 cut(s) 972
EcoNI CCTNNNNNAGG 2 cut(s) 134, 367
EcoO109I RGGNCCY 2 cut(s) 100, 999
EcoRII CCWGG 2 cut(s) 574, 1404
EcoRV GATATC 1 cut(s) 778
EcoT14I CCWWGG 3 cut(s) 1172, 1527, 2012
EcoT22I ATGCAT 1 cut(s) 240
EgeI GGCGCC 1 cut(s) 1148
EheI GGCGCC 1 cut(s) 1148
ErhI CCWWGG 3 cut(s) 1172, 1527, 2012
FaeI CATG 5 cut(s) 242, 569, 1502, 1697, 2069
FaqI GGGAC 2 cut(s) 1651, 1961
FatI CATG 5 cut(s) 238, 565, 1498, 1693, 2065
FauI CCCGC 1 cut(s) 1986
FauNDI CATATG 2 cut(s) 213, 1294
FblI GTMKAC 1 cut(s) 860
Fnu4HI GCNGC 9 cut(s) 274, 277, 1074, 1542, 1662, 1761, 1905, 1908, 1911
FokI GGATG 5 cut(s) 705, 856, 928, 1177, 1318
Fsp4HI GCNGC 9 cut(s) 274, 277, 1074, 1542, 1662, 1761, 1905, 1908, 1911
GlaI GCGC 4 cut(s) 66, 280, 582, 1148
GluI GCNGC 9 cut(s) 274, 277, 1074, 1542, 1662, 1761, 1905, 1908, 1911
GsaI CCCAGC 1 cut(s) 1760
GsuI CTGGAG 1 cut(s) 341
HaeII RGCGCY 1 cut(s) 1150
HaeIII GGCC 6 cut(s) 102, 402, 1358, 1526, 1612, 2018
HapII CCGG 4 cut(s) 1070, 1118, 1303, 2076
HgaI GACGC 1 cut(s) 233
HhaI GCGC 4 cut(s) 67, 281, 583, 1149
Hin1I GRCGYC 1 cut(s) 1147
Hin1II CATG 5 cut(s) 242, 569, 1502, 1697, 2069
Hin6I GCGC 4 cut(s) 65, 279, 581, 1147
HinP1I GCGC 4 cut(s) 65, 279, 581, 1147
HincII GTYRAC 2 cut(s) 642, 1774
HindII GTYRAC 2 cut(s) 642, 1774
HinfI GANTC 6 cut(s) 118, 494, 590, 638, 1394, 1639
HpaII CCGG 4 cut(s) 1070, 1118, 1303, 2076
HphI GGTGA 2 cut(s) 624, 858
Hpy166II GTNNAC 3 cut(s) 642, 861, 1774
Hpy188I TCNGA 9 cut(s) 76, 181, 268, 736, 805, 1335, 1710, 2034, 2054
Hpy8I GTNNAC 3 cut(s) 642, 861, 1774
HpyAV CCTTC 9 cut(s) 154, 566, 695, 731, 1587, 1811, 1815, 1888, 1961
HpyCH4III ACNGT 5 cut(s) 25, 409, 466, 858, 1352
HpyF10VI GCNNNNNNNGC 7 cut(s) 479, 580, 989, 1315, 1667, 1793, 1910
Hsp92I GRCGYC 1 cut(s) 1147
Hsp92II CATG 5 cut(s) 242, 569, 1502, 1697, 2069
HspAI GCGC 4 cut(s) 65, 279, 581, 1147
KasI GGCGCC 1 cut(s) 1146
Kpn2I TCCGGA 1 cut(s) 1302
LmnI GCTCC 3 cut(s) 322, 1965, 1970
Lsp1109I GCAGC 8 cut(s) 260, 288, 1060, 1673, 1747, 1894, 1897, 1916
LweI GCATC 9 cut(s) 25, 359, 703, 740, 950, 979, 1030, 1296, 1648
MaeIII GTNAC 4 cut(s) 226, 630, 1417, 1995
MboII GAAGA 3 cut(s) 593, 818, 1146
MfeI CAATTG 2 cut(s) 1482, 1830
MflI RGATCY 6 cut(s) 78, 126, 334, 812, 841, 1848
MhlI GDGCHC 1 cut(s) 1962
Mly113I GGCGCC 1 cut(s) 1147
MlyI GAGTC 4 cut(s) 503, 584, 647, 1633
MmeI TCCRAC 1 cut(s) 1688
Mph1103I ATGCAT 1 cut(s) 240
MroI TCCGGA 1 cut(s) 1302
MseI TTAA 7 cut(s) 30, 539, 1166, 1431, 1463, 1677, 1748
MslI CAYNNNNRTG 3 cut(s) 233, 2064, 2070
MspA1I CMGCKG 2 cut(s) 1760, 1907
MspI CCGG 4 cut(s) 1070, 1118, 1303, 2076
MspR9I CCNGG 2 cut(s) 576, 1406
MunI CAATTG 2 cut(s) 1482, 1830
Mva1269I GAATGC 2 cut(s) 172, 1906
MvaI CCWGG 2 cut(s) 576, 1406
MwoI GCNNNNNNNGC 7 cut(s) 479, 580, 989, 1315, 1667, 1793, 1910
NarI GGCGCC 1 cut(s) 1147
NdeI CATATG 2 cut(s) 213, 1294
NlaIII CATG 5 cut(s) 242, 569, 1502, 1697, 2069
NlaIV GGNNCC 9 cut(s) 658, 742, 1000, 1148, 1357, 1403, 1755, 1850, 2008
NmuCI GTSAC 4 cut(s) 226, 630, 1417, 1995
NsiI ATGCAT 1 cut(s) 240
NspI RCATGY 1 cut(s) 569
NspV TTCGAA 1 cut(s) 1237
PaeR7I CTCGAG 1 cut(s) 972
PceI AGGCCT 1 cut(s) 1612
PctI GAATGC 2 cut(s) 172, 1906
PfeI GAWTC 2 cut(s) 118, 1394
PflMI CCANNNNNTGG 1 cut(s) 1763
PfoI TCCNGGA 1 cut(s) 1404
PkrI GCNGC 9 cut(s) 275, 278, 1075, 1543, 1663, 1762, 1906, 1909, 1912
PleI GAGTC 4 cut(s) 502, 584, 646, 1633
PluTI GGCGCC 1 cut(s) 1150
PpsI GAGTC 4 cut(s) 502, 584, 646, 1633
PpuMI RGGWCCY 1 cut(s) 999
Psp5II RGGWCCY 1 cut(s) 999
Psp6I CCWGG 2 cut(s) 574, 1404
PspFI CCCAGC 1 cut(s) 1756
PspGI CCWGG 2 cut(s) 574, 1404
PspN4I GGNNCC 9 cut(s) 658, 742, 1000, 1148, 1357, 1403, 1755, 1850, 2008
PspPI GGNCC 7 cut(s) 100, 999, 1064, 1356, 1402, 1753, 2016
PspPPI RGGWCCY 1 cut(s) 999
PstI CTGCAG 1 cut(s) 278
PstNI CAGNNNCTG 5 cut(s) 575, 755, 1763, 1787, 1910
PsuI RGATCY 6 cut(s) 78, 126, 334, 812, 841, 1848
PvuII CAGCTG 2 cut(s) 1760, 1907
RsaI GTAC 3 cut(s) 838, 970, 1736
RsaNI GTAC 3 cut(s) 837, 969, 1735
RseI CAYNNNNRTG 3 cut(s) 233, 2064, 2070
SaqAI TTAA 7 cut(s) 30, 539, 1166, 1431, 1463, 1677, 1748
SatI GCNGC 9 cut(s) 274, 277, 1074, 1542, 1662, 1761, 1905, 1908, 1911
Sau96I GGNCC 7 cut(s) 100, 999, 1064, 1356, 1402, 1753, 2016
ScaI AGTACT 1 cut(s) 1736
SchI GAGTC 4 cut(s) 503, 584, 647, 1633
ScrFI CCNGG 2 cut(s) 576, 1406
SduI GDGCHC 1 cut(s) 1962
SfaNI GCATC 9 cut(s) 25, 359, 703, 740, 950, 979, 1030, 1296, 1648
SfcI CTRYAG 4 cut(s) 274, 822, 1030, 1389
SfoI GGCGCC 1 cut(s) 1148
Sfr274I CTCGAG 1 cut(s) 972
SfuI TTCGAA 1 cut(s) 1237
SinI GGWCC 4 cut(s) 999, 1064, 1402, 1753
SlaI CTCGAG 1 cut(s) 972
SmiMI CAYNNNNRTG 3 cut(s) 233, 2064, 2070
SmlI CTYRAG 3 cut(s) 109, 972, 1505
SmoI CTYRAG 3 cut(s) 109, 972, 1505
SseBI AGGCCT 1 cut(s) 1612
SsiI CCGC 3 cut(s) 729, 1542, 1979
SspDI GGCGCC 1 cut(s) 1146
SspI AATATT 1 cut(s) 1689
StuI AGGCCT 1 cut(s) 1612
StyD4I CCNGG 2 cut(s) 574, 1404
StyI CCWWGG 3 cut(s) 1172, 1527, 2012
TaaI ACNGT 5 cut(s) 25, 409, 466, 858, 1352
TaqI TCGA 9 cut(s) 116, 135, 150, 189, 646, 973, 1132, 1237, 1439
TatI WGTACW 1 cut(s) 1734
TauI GCSGC 1 cut(s) 1544
TfiI GAWTC 2 cut(s) 118, 1394
Tru1I TTAA 7 cut(s) 30, 539, 1166, 1431, 1463, 1677, 1748
Tru9I TTAA 7 cut(s) 30, 539, 1166, 1431, 1463, 1677, 1748
TscAI CASTG 5 cut(s) 345, 469, 480, 1042, 1201
TseFI GTSAC 4 cut(s) 226, 630, 1417, 1995
TseI GCWGC 8 cut(s) 273, 276, 1073, 1661, 1760, 1904, 1907, 1910
Tsp45I GTSAC 4 cut(s) 226, 630, 1417, 1995
TspDTI ATGAA 5 cut(s) 367, 612, 894, 1311, 1487
TspGWI ACGGA 1 cut(s) 1373
TspRI CASTG 5 cut(s) 345, 469, 480, 1042, 1201
Van91I CCANNNNNTGG 1 cut(s) 1763
VpaK11BI GGWCC 4 cut(s) 999, 1064, 1402, 1753
XagI CCTNNNNNAGG 2 cut(s) 134, 367
XapI RAATTY 2 cut(s) 881, 1411
XceI RCATGY 1 cut(s) 569
XcmI CCANNNNNNNNNTGG 1 cut(s) 1366
XhoI CTCGAG 1 cut(s) 972
XmiI GTMKAC 1 cut(s) 860
ZrmI AGTACT 1 cut(s) 1736
Zsp2I ATGCAT 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.