AT5G67340

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0003836
Physical Location & Seq
Forward (+)
26864395 .. 26867847
3453 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G67340.1

Sequence Viewer

Length: 2124 bp
ATGATGGTACATATGGAGGTGTCTTGGTTAAGAGTTCTTCTAGATAACATCTCCTCCTATCTAAGTTTATCATCTATGGACGATTTATCTTCAAACCCTGCTCATAAGTACTACACCAGAGGAGAAGATATAGGAAAGCTTATCAAGCCTGTTCTTGAGAACCTCATTGACTCTGACGCGGCTCCTAGCGAGTTGCTTAACAATGGTTTTGAAGAATTAGCTCAATACGTTGATGAACTTAGAGAACAGTTTCAGAGTTGGCAACCTCTTTCAACTAGAATCTTTTATGTTCTTCGAATTGAATCATTAGCATCAAAGTTACGAGAATCCAGTTTGGAAGTCTTTCAGCTCCTCAAACACTGCGAACAACATTTGCCTGCTGACTTGATCTCACCTTCTTTTGAGGAGTGCATTGAATTGGTGAAGTTAGTGGCAAGAGACGAAATATCGTATACTATTGATCAAGCTCTAAAAGATCAAAAGAAAGGTGTTGGACCTACTTCAGAGGTTCTGGTGAAAATTGCCGAGAGTACTGGTTTAAGATCCAACCAGGAGATTCTTGTTGAAGGTGTGGTACTTACAAACATGAAGGAGGATGCTGAGCTTACCGATAATGACACCGAAGCCGAGTATCTAGACGGATTGATCTCTCTAACAACACAAATGCATGAGTACCTTAGCGACATAAAGCAGGCTCAGTTACGTTGTCCAGTACGCGTACCTTCTGATTTCCGCTGCTCTCTATCTCTTGAGCTTATGACTGATCCAGTCATTGTAGCATCTGGTCAAACATTCGAACGGGTTTTTATCCAGAAATGGATCGATATGGGACTCATGGTTTGTCCAAAGACAAGGCAGGCTTTATCTCATACCACTTTGACACCTAATTTCATTGTCAGAGCTTTTCTTGCAAGTTGGTGTGAAACTAACAATGTCTATCCTCCTGATCCATTGGAGTTGATTCACTCAAGTGAGCCATTCCCTCTTCTTGTTGAATCAGTGAGAGCTTCATCATCAGAGAATGGCCATTCAGAATCTTTAGATGCAGAGGAACTGCGTCAGGTCTTTAGTAGGTCTGCTTCGGCGCCAGGCATTGTCTCTGAAGTGGTTTGCAAAACCAAAAGAAACAACAATGCTGCTGCAGATAGATCACTGACACGGAGTAATACCCCTTGGAAATTTCCAGAAGAGAGGCATTGGCGTCACCCCGGGATCATCCCAGCGACCGTAAGAGAAACAGGAAGCAGTTCAAGTATCGAAACCGAGGTGAAGAAACTCATTGATGATCTCAAGAGTTCTTCATTGGATACACAGAGAGAGGCCACAGCTAGAATCAGGATACTAGCAAGAAACAGTACAGACAATCGCATTGTCATTGCGCGGTGCGAAGCAATCCCTTCGTTAGTCAGTCTTCTTTACTCAACGGATGAGAGAATCCAAGCAGACGCAGTGACTTGCTTACTAAACTTATCCATCAACGACAACAACAAGTCCCTCATCGCGGAAAGTGGAGCCATCGTACCGCTTATTCACGTTCTCAAAACAGGATACTTAGAAGAAGCTAAAGCAAACTCAGCAGCAACTCTATTCAGCTTGTCGGTGATCGAAGAGTACAAGACAGAGATAGGAGAAGCAGGAGCTATAGAGCCACTTGTTGACCTCTTAGGAAGTGGAAGTCTCAGTGGGAAGAAAGATGCAGCCACGGCTTTATTCAACCTCTCAATACACCATGAGAACAAAACGAAAGTAATCGAAGCTGGAGCAGTGAGATACTTAGTTGAACTGATGGATCCTGCTTTTGGGATGGTGGAGAAAGCTGTGGTGGTGCTAGCGAATCTTGCAACGGTTAGAGAAGGAAAGATTGCGATAGGCGAAGAAGGAGGAATACCGGTATTGGTGGAAGTTGTGGAGTTAGGTTCAGCAAGAGGCAAAGAGAATGCAACTGCAGCACTATTGCAGCTTTGTACGCATAGCCCGAAATTCTGCAACAATGTCATAAGAGAAGGAGTGATTCCACCTCTTGTGGCACTTACTAAATCAGGAACAGCTAGAGGCAAAGAGAAGGCACAGAATCTTCTGAAGTACTTTAAAGCACACAGACAAAGCAATCAGAGGAGAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

707

Amino Acids

78.12

Weight (kDa)

5.34

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 6 - 144 9.5e-48 PUB2-like, N-terminal domain
U-box PF04564 240 - 310 2.7e-17 U-box domain
ARM_PUB PF25598 422 - 702 2.8e-27 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 423 - 596 2.5e-10 ARMC5
Arm PF00514 452 - 491 1.5e-08 Armadillo/beta-catenin-like repeat
Arm PF00514 537 - 574 1.2e-07 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1084
AccI GTMKAC 1 cut(s) 452
AccII CGCG 4 cut(s) 179, 717, 1381, 1502
AciI CCGC 5 cut(s) 179, 733, 1381, 1502, 1523
AclWI GGATC 7 cut(s) 537, 758, 827, 941, 1220, 1784, 1797
AcoI YGGCCR 1 cut(s) 1024
AcsI RAATTY 2 cut(s) 1178, 1979
AcuI CTGAAG 3 cut(s) 486, 1122, 2099
AcyI GRCGYC 2 cut(s) 1085, 1201
AfiI CCNNNNNNNGG 2 cut(s) 1501, 1799
AflIII ACRYGT 1 cut(s) 715
AgeI ACCGGT 1 cut(s) 1888
AjnI CCWGG 2 cut(s) 549, 1087
AleI CACNNNNGTG 1 cut(s) 969
Alw26I GTCTC 3 cut(s) 432, 1102, 1682
AlwI GGATC 7 cut(s) 537, 758, 827, 941, 1220, 1784, 1797
Ama87I CYCGRG 1 cut(s) 1208
AoxI GGCC 2 cut(s) 1024, 1320
ApeKI GCWGC 7 cut(s) 735, 1136, 1139, 1577, 1697, 1946, 1957
ApoI RAATTY 2 cut(s) 1178, 1979
ArsI GACNNNNNNTTYG 2 cut(s) 822, 854
AsiGI ACCGGT 1 cut(s) 1888
Asp700I GAANNNNTTC 3 cut(s) 249, 342, 1246
AspLEI GCGC 2 cut(s) 1087, 1381
AspS9I GGNCC 1 cut(s) 494
AsuC2I CCSGG 2 cut(s) 1209, 1210
AsuHPI GGTGA 6 cut(s) 384, 433, 526, 1196, 1279, 1612
AsuII TTCGAA 2 cut(s) 295, 795
AsuNHI GCTAGC 1 cut(s) 1828
AvaI CYCGRG 1 cut(s) 1208
AvaII GGWCC 1 cut(s) 494
BalI TGGCCA 1 cut(s) 1026
BamHI GGATCC 1 cut(s) 1789
BanI GGYRCC 1 cut(s) 1084
BarI GAAGNNNNNNTAC 6 cut(s) 558, 590, 1063, 1095, 1869, 1901
BbsI GAAGAC 1 cut(s) 1403
BbvI GCAGC 7 cut(s) 722, 1123, 1126, 1589, 1709, 1958, 1969
BccI CCATC 4 cut(s) 1481, 1523, 1780, 1798
BceAI ACGGC 1 cut(s) 1719
BcgI CGANNNNNNTGC 2 cut(s) 1380, 1414
BciT130I CCWGG 2 cut(s) 551, 1089
BciVI GTATCC 3 cut(s) 1300, 1332, 1541
BclI TGATCA 1 cut(s) 460
BcnI CCSGG 2 cut(s) 1209, 1210
BcoDI GTCTC 3 cut(s) 432, 1102, 1682
BfaI CTAG 8 cut(s) 41, 186, 276, 635, 1329, 1343, 1829, 2049
BfmI CTRYAG 3 cut(s) 1140, 1641, 1944
BfoI RGCGCY 1 cut(s) 1088
BfuI GTATCC 3 cut(s) 1300, 1332, 1541
BisI GCNGC 8 cut(s) 180, 736, 1137, 1140, 1578, 1698, 1947, 1958
BlpI GCTNAGC 1 cut(s) 600
BlsI GCNGC 8 cut(s) 181, 737, 1138, 1141, 1579, 1699, 1948, 1959
BmcAI AGTACT 3 cut(s) 110, 532, 2084
Bme1390I CCNGG 4 cut(s) 551, 1089, 1209, 1210
Bme18I GGWCC 1 cut(s) 494
BmeT110I CYCGRG 1 cut(s) 1208
BmgT120I GGNCC 1 cut(s) 494
BmiI GGNNCC 4 cut(s) 183, 1086, 1513, 1791
BmrFI CCNGG 4 cut(s) 551, 1089, 1209, 1210
BmsI GCATC 5 cut(s) 320, 586, 788, 1033, 1684
BmtI GCTAGC 1 cut(s) 1832
BpiI GAAGAC 1 cut(s) 1403
BpmI CTGGAG 1 cut(s) 1779
Bpu10I CCTNAGC 1 cut(s) 677
Bpu1102I GCTNAGC 1 cut(s) 600
Bpu14I TTCGAA 2 cut(s) 295, 795
BpuEI CTTGAG 4 cut(s) 176, 770, 952, 1274
BpuMI CCSGG 2 cut(s) 1209, 1210
Bsa29I ATCGAT 1 cut(s) 822
BsaHI GRCGYC 2 cut(s) 1085, 1201
BsaJI CCNNGG 5 cut(s) 1172, 1207, 1208, 1263, 1701
BsaWI WCCGGW 1 cut(s) 1888
BsaXI ACNNNNNCTCC 4 cut(s) 38, 68, 1503, 1533
Bsc4I CCNNNNNNNGG 2 cut(s) 1501, 1799
Bse118I RCCGGY 1 cut(s) 1888
Bse1I ACTGG 4 cut(s) 330, 538, 710, 767
Bse3DI GCAATG 1 cut(s) 1374
BseBI CCWGG 2 cut(s) 551, 1089
BseCI ATCGAT 1 cut(s) 822
BseDI CCNNGG 5 cut(s) 1172, 1207, 1208, 1263, 1701
BseGI GGATG 4 cut(s) 601, 1215, 1432, 1809
BseLI CCNNNNNNNGG 2 cut(s) 1501, 1799
BseMI GCAATG 1 cut(s) 1374
BseMII CTCAG 4 cut(s) 591, 710, 1587, 1693
BseNI ACTGG 4 cut(s) 330, 538, 710, 767
BseRI GAGGAG 4 cut(s) 43, 135, 341, 419
BseXI GCAGC 7 cut(s) 722, 1123, 1126, 1589, 1709, 1958, 1969
BseYI CCCAGC 1 cut(s) 1219
Bsh1236I CGCG 4 cut(s) 179, 717, 1381, 1502
Bsh1285I CGRYCG 1 cut(s) 1227
BshFI GGCC 2 cut(s) 1026, 1322
BshNI GGYRCC 1 cut(s) 1084
BshTI ACCGGT 1 cut(s) 1888
BshVI ATCGAT 1 cut(s) 822
BsiEI CGRYCG 1 cut(s) 1227
BsiHKCI CYCGRG 1 cut(s) 1208
BsiSI CCGG 2 cut(s) 1209, 1889
BslFI GGGAC 2 cut(s) 843, 1477
BslI CCNNNNNNNGG 2 cut(s) 1501, 1799
BsmAI GTCTC 3 cut(s) 432, 1102, 1682
BsmBI CGTCTC 1 cut(s) 432
BsmFI GGGAC 2 cut(s) 843, 1477
BsmI GAATGC 1 cut(s) 1942
BsnI GGCC 2 cut(s) 1026, 1322
BsoBI CYCGRG 1 cut(s) 1208
Bsp119I TTCGAA 2 cut(s) 295, 795
Bsp1720I GCTNAGC 1 cut(s) 600
BspACI CCGC 5 cut(s) 179, 733, 1381, 1502, 1523
BspANI GGCC 2 cut(s) 1026, 1322
BspCNI CTCAG 4 cut(s) 592, 709, 1586, 1692
BspDI ATCGAT 1 cut(s) 822
BspFNI CGCG 4 cut(s) 179, 717, 1381, 1502
BspLI GGNNCC 4 cut(s) 183, 1086, 1513, 1791
BspMAI CTGCAG 2 cut(s) 1144, 1948
BspOI GCTAGC 1 cut(s) 1832
BspPI GGATC 7 cut(s) 537, 758, 827, 941, 1220, 1784, 1797
BspT104I TTCGAA 2 cut(s) 295, 795
BspT107I GGYRCC 1 cut(s) 1084
BsrDI GCAATG 1 cut(s) 1374
BsrFI RCCGGY 1 cut(s) 1888
BsrI ACTGG 4 cut(s) 330, 538, 710, 767
BssAI RCCGGY 1 cut(s) 1888
BssECI CCNNGG 5 cut(s) 1172, 1207, 1208, 1263, 1701
BssNAI GTATAC 1 cut(s) 453
BssNI GRCGYC 2 cut(s) 1085, 1201
BssT1I CCWWGG 1 cut(s) 1172
Bst1107I GTATAC 1 cut(s) 453
Bst2UI CCWGG 2 cut(s) 551, 1089
Bst4CI ACNGT 4 cut(s) 249, 1228, 1355, 1846
Bst6I CTCTTC 3 cut(s) 990, 1182, 1602
BstACI GRCGYC 2 cut(s) 1085, 1201
BstBI TTCGAA 2 cut(s) 295, 795
BstC8I GCNNGC 4 cut(s) 378, 693, 858, 1830
BstDSI CCRYGG 1 cut(s) 1701
BstF5I GGATG 4 cut(s) 601, 1215, 1432, 1809
BstFNI CGCG 4 cut(s) 179, 717, 1381, 1502
BstH2I RGCGCY 1 cut(s) 1088
BstHHI GCGC 2 cut(s) 1087, 1381
BstMAI GTCTC 3 cut(s) 432, 1102, 1682
BstMCI CGRYCG 1 cut(s) 1227
BstMWI GCNNNNNNNGC 7 cut(s) 145, 908, 1574, 1703, 1838, 1946, 1966
BstNI CCWGG 2 cut(s) 551, 1089
BstSCI CCNGG 4 cut(s) 549, 1087, 1207, 1208
BstSFI CTRYAG 3 cut(s) 1140, 1641, 1944
BstUI CGCG 4 cut(s) 179, 717, 1381, 1502
BstV1I GCAGC 7 cut(s) 722, 1123, 1126, 1589, 1709, 1958, 1969
BstV2I GAAGAC 1 cut(s) 1403
BstX2I RGATCY 2 cut(s) 542, 1789
BstYI RGATCY 2 cut(s) 542, 1789
BstZ17I GTATAC 1 cut(s) 453
Bsu15I ATCGAT 1 cut(s) 822
BsuI GTATCC 3 cut(s) 1300, 1332, 1541
BsuRI GGCC 2 cut(s) 1026, 1322
BsuTUI ATCGAT 1 cut(s) 822
BtgI CCRYGG 1 cut(s) 1701
BtgZI GCGATG 1 cut(s) 1483
BtsCI GGATG 4 cut(s) 601, 1215, 1432, 1809
BtsI GCAGTG 3 cut(s) 358, 1455, 1770
BtsIMutI CAGTG 6 cut(s) 358, 1005, 1151, 1455, 1687, 1770
Cac8I GCNNGC 4 cut(s) 378, 693, 858, 1830
CfoI GCGC 2 cut(s) 1087, 1381
Cfr10I RCCGGY 1 cut(s) 1888
Cfr13I GGNCC 1 cut(s) 494
Cfr9I CCCGGG 1 cut(s) 1208
ClaI ATCGAT 1 cut(s) 822
CseI GACGC 4 cut(s) 185, 1046, 1190, 1454
CspAI ACCGGT 1 cut(s) 1888
CviAII CATG 4 cut(s) 586, 668, 835, 1730
DinI GGCGCC 1 cut(s) 1086
DraI TTTAAA 1 cut(s) 2089
EaeI YGGCCR 1 cut(s) 1024
Eam1104I CTCTTC 3 cut(s) 990, 1182, 1602
EarI CTCTTC 3 cut(s) 990, 1182, 1602
Eco130I CCWWGG 1 cut(s) 1172
Eco47I GGWCC 1 cut(s) 494
Eco57I CTGAAG 3 cut(s) 486, 1122, 2099
Eco88I CYCGRG 1 cut(s) 1208
EcoRII CCWGG 2 cut(s) 549, 1087
EcoT14I CCWWGG 1 cut(s) 1172
EcoT22I ATGCAT 1 cut(s) 669
EgeI GGCGCC 1 cut(s) 1086
EheI GGCGCC 1 cut(s) 1086
ErhI CCWWGG 1 cut(s) 1172
Esp3I CGTCTC 1 cut(s) 432
FaeI CATG 4 cut(s) 589, 671, 838, 1733
FalI AAGNNNNNCTT 2 cut(s) 844, 876
FaqI GGGAC 2 cut(s) 843, 1477
FatI CATG 4 cut(s) 585, 667, 834, 1729
FauNDI CATATG 1 cut(s) 12
FbaI TGATCA 1 cut(s) 460
FblI GTMKAC 1 cut(s) 452
Fnu4HI GCNGC 8 cut(s) 180, 736, 1137, 1140, 1578, 1698, 1947, 1958
FokI GGATG 4 cut(s) 608, 1202, 1439, 1816
Fsp4HI GCNGC 8 cut(s) 180, 736, 1137, 1140, 1578, 1698, 1947, 1958
FspBI CTAG 8 cut(s) 41, 186, 276, 635, 1329, 1343, 1829, 2049
GlaI GCGC 2 cut(s) 1086, 1380
GluI GCNGC 8 cut(s) 180, 736, 1137, 1140, 1578, 1698, 1947, 1958
GsaI CCCAGC 1 cut(s) 1223
GsuI CTGGAG 1 cut(s) 1779
HaeII RGCGCY 1 cut(s) 1088
HaeIII GGCC 2 cut(s) 1026, 1322
HapII CCGG 2 cut(s) 1209, 1889
HgaI GACGC 4 cut(s) 185, 1046, 1190, 1454
HhaI GCGC 2 cut(s) 1087, 1381
Hin1I GRCGYC 2 cut(s) 1085, 1201
Hin1II CATG 4 cut(s) 589, 671, 838, 1733
Hin6I GCGC 2 cut(s) 1085, 1379
HinP1I GCGC 2 cut(s) 1085, 1379
HincII GTYRAC 1 cut(s) 1657
HindII GTYRAC 1 cut(s) 1657
HindIII AAGCTT 1 cut(s) 137
HpaII CCGG 2 cut(s) 1209, 1889
HphI GGTGA 6 cut(s) 384, 433, 526, 1196, 1279, 1612
Hpy166II GTNNAC 2 cut(s) 453, 1657
Hpy8I GTNNAC 2 cut(s) 453, 1657
HpyAV CCTTC 9 cut(s) 405, 560, 583, 732, 1407, 1847, 1871, 1997, 2056
HpyCH4III ACNGT 4 cut(s) 249, 1228, 1355, 1846
HpyCH4IV ACGT 3 cut(s) 228, 703, 1533
HpyF10VI GCNNNNNNNGC 7 cut(s) 145, 908, 1574, 1703, 1838, 1946, 1966
HpySE526I ACGT 3 cut(s) 228, 703, 1533
Hsp92I GRCGYC 2 cut(s) 1085, 1201
Hsp92II CATG 4 cut(s) 589, 671, 838, 1733
HspAI GCGC 2 cut(s) 1085, 1379
KasI GGCGCC 1 cut(s) 1084
Ksp22I TGATCA 1 cut(s) 460
LmnI GCTCC 5 cut(s) 187, 354, 1511, 1637, 1760
Lsp1109I GCAGC 7 cut(s) 722, 1123, 1126, 1589, 1709, 1958, 1969
LweI GCATC 5 cut(s) 320, 586, 788, 1033, 1684
MaeI CTAG 8 cut(s) 41, 186, 276, 635, 1329, 1343, 1829, 2049
MaeII ACGT 3 cut(s) 228, 703, 1533
MaeIII GTNAC 4 cut(s) 318, 699, 1202, 1450
MflI RGATCY 2 cut(s) 542, 1789
MlsI TGGCCA 1 cut(s) 1026
MluCI AATT 7 cut(s) 215, 297, 416, 519, 886, 1178, 1979
MluI ACGCGT 1 cut(s) 715
MluNI TGGCCA 1 cut(s) 1026
Mly113I GGCGCC 1 cut(s) 1085
MlyI GAGTC 2 cut(s) 164, 825
MmeI TCCRAC 2 cut(s) 472, 570
Mox20I TGGCCA 1 cut(s) 1026
Mph1103I ATGCAT 1 cut(s) 669
MroXI GAANNNNTTC 3 cut(s) 249, 342, 1246
MscI TGGCCA 1 cut(s) 1026
MseI TTAA 4 cut(s) 29, 198, 539, 2088
MslI CAYNNNNRTG 1 cut(s) 969
Msp20I TGGCCA 1 cut(s) 1026
MspA1I CMGCKG 1 cut(s) 735
MspI CCGG 2 cut(s) 1209, 1889
MspR9I CCNGG 4 cut(s) 551, 1089, 1209, 1210
Mva1269I GAATGC 1 cut(s) 1942
MvaI CCWGG 2 cut(s) 551, 1089
MvnI CGCG 4 cut(s) 179, 717, 1381, 1502
MwoI GCNNNNNNNGC 7 cut(s) 145, 908, 1574, 1703, 1838, 1946, 1966
NarI GGCGCC 1 cut(s) 1085
NciI CCSGG 2 cut(s) 1209, 1210
NdeI CATATG 1 cut(s) 12
NheI GCTAGC 1 cut(s) 1828
NlaIII CATG 4 cut(s) 589, 671, 838, 1733
NlaIV GGNNCC 4 cut(s) 183, 1086, 1513, 1791
NmeAIII GCCGAG 2 cut(s) 550, 652
NmuCI GTSAC 2 cut(s) 1202, 1450
NsiI ATGCAT 1 cut(s) 669
NspV TTCGAA 2 cut(s) 295, 795
OliI CACNNNNGTG 1 cut(s) 969
PcsI WCGNNNNNNNCGW 1 cut(s) 1973
PctI GAATGC 1 cut(s) 1942
PdmI GAANNNNTTC 3 cut(s) 249, 342, 1246
PinAI ACCGGT 1 cut(s) 1888
PkrI GCNGC 8 cut(s) 181, 737, 1138, 1141, 1579, 1699, 1948, 1959
PleI GAGTC 2 cut(s) 164, 825
PluTI GGCGCC 1 cut(s) 1088
PpsI GAGTC 2 cut(s) 164, 825
Psp6I CCWGG 2 cut(s) 549, 1087
PspFI CCCAGC 1 cut(s) 1219
PspGI CCWGG 2 cut(s) 549, 1087
PspN4I GGNNCC 4 cut(s) 183, 1086, 1513, 1791
PspPI GGNCC 1 cut(s) 494
PstI CTGCAG 2 cut(s) 1144, 1948
PsuI RGATCY 2 cut(s) 542, 1789
RseI CAYNNNNRTG 1 cut(s) 969
SaqAI TTAA 4 cut(s) 29, 198, 539, 2088
SatI GCNGC 8 cut(s) 180, 736, 1137, 1140, 1578, 1698, 1947, 1958
Sau96I GGNCC 1 cut(s) 494
ScaI AGTACT 3 cut(s) 110, 532, 2084
SchI GAGTC 2 cut(s) 164, 825
ScrFI CCNGG 4 cut(s) 551, 1089, 1209, 1210
SfaNI GCATC 5 cut(s) 320, 586, 788, 1033, 1684
SfcI CTRYAG 3 cut(s) 1140, 1641, 1944
SfoI GGCGCC 1 cut(s) 1086
SfuI TTCGAA 2 cut(s) 295, 795
SinI GGWCC 1 cut(s) 494
SmaI CCCGGG 1 cut(s) 1210
SmiMI CAYNNNNRTG 1 cut(s) 969
SmlI CTYRAG 4 cut(s) 155, 749, 967, 1289
SmoI CTYRAG 4 cut(s) 155, 749, 967, 1289
Sse9I AATT 7 cut(s) 215, 297, 416, 519, 886, 1178, 1979
SsiI CCGC 5 cut(s) 179, 733, 1381, 1502, 1523
SspDI GGCGCC 1 cut(s) 1084
SspMI CTAG 8 cut(s) 41, 186, 276, 635, 1329, 1343, 1829, 2049
StyD4I CCNGG 4 cut(s) 549, 1087, 1207, 1208
StyI CCWWGG 1 cut(s) 1172
TaaI ACNGT 4 cut(s) 249, 1228, 1355, 1846
TaiI ACGT 3 cut(s) 231, 706, 1536
TaqI TCGA 6 cut(s) 295, 795, 822, 1257, 1605, 1752
TasI AATT 7 cut(s) 215, 297, 416, 519, 886, 1178, 1979
TatI WGTACW 5 cut(s) 108, 530, 1355, 1611, 2082
TauI GCSGC 1 cut(s) 182
Tru1I TTAA 4 cut(s) 29, 198, 539, 2088
Tru9I TTAA 4 cut(s) 29, 198, 539, 2088
TscAI CASTG 6 cut(s) 365, 1005, 1158, 1455, 1687, 1770
TseFI GTSAC 2 cut(s) 1202, 1450
TseI GCWGC 7 cut(s) 735, 1136, 1139, 1577, 1697, 1946, 1957
Tsp45I GTSAC 2 cut(s) 1202, 1450
TspDTI ATGAA 5 cut(s) 249, 602, 880, 999, 1290
TspGWI ACGGA 3 cut(s) 654, 1174, 1439
TspMI CCCGGG 1 cut(s) 1208
TspRI CASTG 6 cut(s) 365, 1005, 1158, 1455, 1687, 1770
VpaK11BI GGWCC 1 cut(s) 494
XapI RAATTY 2 cut(s) 1178, 1979
XbaI TCTAGA 2 cut(s) 40, 634
XmaI CCCGGG 1 cut(s) 1208
XmiI GTMKAC 1 cut(s) 452
XmnI GAANNNNTTC 3 cut(s) 249, 342, 1246
XspI CTAG 8 cut(s) 41, 186, 276, 635, 1329, 1343, 1829, 2049
ZrmI AGTACT 3 cut(s) 110, 532, 2084
Zsp2I ATGCAT 1 cut(s) 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.