Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003836

Physical Location & Seq

Genomic Coordinates Forward (+)

20010285 .. 20014084

Gene Structure 3800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g25510.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

ATGGCCGTTATTATTTTTGAAATGTATTATATGTTTGCTCTTCTATTACTTTTCAAGACTTGGTTTCTATTCCTTTCTTCTGCAGAGAGACCATTATACTTATTATATGTATTCCTTTCTTCTGCTGAGAGACTATTATACTTATTATATGTTGATGCAGGTGTGATGGAGATATCATTGTTCAAAGCACTTCTTAATAACATCTCCTCTTTTTTCCATTTATCATCTCATAACAACATAAACTTTGACCCGGTTCTGAAGTACTACAAGAGCGCCGAAGAGATATTAAAACTGTTGAAGACTCTACTTGATGCCATTGCTGATTCTGAAATAGCTTCTTATGAAATACTTGATAAGCCATTTGAGGAACTGGGTCAGTATGTTGATGAGTTGAGGGAGCAAATTGAAGACTGGCAGCCATTGTCTAGTAAAGTCAATCTTATTCTTCAAGTTGAATCGTTGATATCAAAGATTTGGGCTTCTGGCCTGGATATCTTTCAACTGTTGAAAACTTCCCCCCAGCATCTTCCTGATGAAATGGGTTCAGCATCTCTTGAGCAATGCATACAAAAACTTGAGCACATGGGCTATGAACAAATGTCAACTGTCATTAAGGATGCTATAAGCGATCAAGTGGAGGGTGTTGGACCAAGCTCAGAGATCCTAGTGAAAATTGCAGAGGGCCTTAGCTTGAAGTCAAACCAGGAGATTCTTATTGAGGCTGTAGCACTTGAAAAGTTGAAGGAAAATGCTGAACAATCTGAAAAGATTGAGGAAGCGGAGTATATTGAGCAAATGATATCCCTTGTTACCCGTATGCACGAGCGCCTTATTACCATAAAGCAAGCCAGGAGCTGCAGCCCTGTTCCAATACCTGCTGATTTCTGTTGCCCCCTCTCTCTGGAGCTGATGACGGATCCAGTGATTGTGGCATCAGGACAAACCTATGAGAGAACTTTCATCAAGAACTGGATCGGTCTTGGCCTCACTGTTTGTCCAAAGACGCGGCAGACTTTGGCTCACACCAATTTGATACCTAATTACACTGTAAAGGCACTAATTGCAAATTGGTGTGAGTCAAACAATGTGAAACTGCCTGATCCGGTAAAGTCTGTTGGCTTAAATAAGTCAGCACACCTTCTTGGGCATGCAGAGCCTGATACACCAAAGGATTCTCCTATTTTTTCTCATTCCAGTGTCAATGAATCAATGTCACCTGAGTCTACTCGGTCTACTGGTTTGCCCTCTAAGAACATGTTTTCATCTGGTCCACTGCATCGGGAGAGAATTTCTCCTTTGCATCCTCGTTCAACATCAGAAGGTTCCTTGCCTTGTATAGTTGGAAATGGGCAGGCTTTGGATATTGAAAGAATATCACTAGCAAATTCTGAAGACAGGTCTGCCAACTTAGAAGAAAGGAGTACAGATCTAGATAGCCAGCACTCTATGTCGCCATCTCGAGATGAACTTCCTATTTCTATTGAAGATGAGCAGCCATCTCAAAGCCATAATAGAACTGCGTCAGCTTCTAGCGTACTTTTTAATGCCAATGGTACTCAAGGAACTTCTGTCAATGCCAATGGGGTCTTACAGGTATCGACGAATCTGTCAGGCGACAGCAGTGACGCTTCTGGGGAGTTGAAATCACAAGCACAAACTGTTGCTCCCTTGGCCCCCCAACTGAGAGAAACTGAGTCACCAACCAGAATGGCAGAGTCAAGACCTCGAAACCAAATGTGGCGCCGACCATCTAGCTTCCCGAGGATAGTTTCTTCTCCACCTATTGAAACAAGGCCTGATCGTTCTGAACTTGAAGCCCAAGTTCGTAACCTAGTTGATGATTTGAAAAGCACTTCACTTGATACACAAAGAGAGGCAACATTTAAACTCCGGCTACTTGCCAAACATAATATGGATAATCGGATTGTTATTGCAAATTGTGGGGCCATTGGCTTGTTGGTGGATTTGCTCCGCTCTACAGATACAAGAGTTCAAGAGAATGCTGTCACAGCACTTCTTAACTTATCGATTAATGATAACAACAAAACTGCAATTGCCACTGCCAATGCAATTGAACCTCTGATTCATGTCCTTGAGACAGGGAGTGCTGAGGCCAAGGAGAACTCAGCTGCCACTCTATTTAGCCTTTCGGTGATCGAGGACAACAAGGTTCGTATTGGAAGGTCAGGGGCTATTGGGCCTCTGGTTGATTTATTGGGGAATGGGAGTCCCAGAGGGAGGAAAGATGCAGCCACAGCTTTGTTTAATTTGTCAATTTTTCATGAGAACAAGGATAGAATTGTTCAAGCTGGTGCTGTAAAGTACCTAGTGGAGTTGATGGACCCTGCGGCGGGAATGGTTGACAAGGCAGTTGCTGTTTTGGCTAATCTTTCGACAATTCCCGAGGGAAGGACAGCAATTGGTCAGGAGGGTGGGATCCCTGTTCTTGTCGAGGTTGTTGAGTTGGGTTCTGCAAGAGGGAAGGAGAACGCAGCTGCTGCTCTTTTACAGCTCTGCACAAACAGTAACAGATTTTGCAGTCAGGTCCTCCAAGAAGGAGCTGTCCCACCATTAGTGGTATTGTCACAATCCGGCACCCCTAGGGCAAAAGAAAAGGCACAGACACTCCTTAGCTACTTCAGAAACCATAGACAAGGTAATGCTGGTAGAGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

892

Amino Acids

97.66

Weight (kDa)

5.33

Isoelectric Point (pI)

46.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003836)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23140 AT2G23140 AT2G23140 AT2G23140 AT2G23140 AT5G67340 AT5G67340
fragaria_vesca	FvH4_1g17050 FvH4_1g17050 FvH4_1g17050 FvH4_1g17050
malus_domestica	MD02G1180700.v1.1 MD15G1291600.v1.1
prunus_persica	Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1 Prupe.6G225600_v2.0.a1
pyrus_communis	pycom02g14670 pycom15g25510
rosa_chinensis	RchiOBHm_Chr2g0107211
rosa_laevigata	RLG00000017560
rosa_multiflora	Rmu_co8148606.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136540
rosa_rugosa	Rorug02G0140900 Rorug02G0140900 Rorug02G0140900
rosa_samantha	Rh2AG191600 Rh2BG203600 Rh2CG196800 Rh2DG198900
rosa_wichuraiana	Rw2G015150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	149
AasI	GACNNNNNNGTC	1 cut(s)	1606
Acc36I	ACCTGC	2 cut(s)	149, 883
AccB1I	GGYRCC	2 cut(s)	1740, 2594
AccBSI	CCGCTC	1 cut(s)	1974
AccI	GTMKAC	2 cut(s)	1223, 1232
AccII	CGCG	1 cut(s)	1006
AciI	CCGC	5 cut(s)	779, 1006, 1972, 2348, 2351
AclWI	GGATC	7 cut(s)	655, 911, 924, 980, 1094, 2431, 2444
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	1287, 1384
AcuI	CTGAAG	3 cut(s)	278, 1410, 2623
AcyI	GRCGYC	1 cut(s)	1741
AfaI	GTAC	5 cut(s)	263, 1423, 1536, 1555, 2324
AfiI	CCNNNNNNNGG	5 cut(s)	901, 2238, 2350, 2351, 2409
AflIII	ACRYGT	1 cut(s)	1254
AjnI	CCWGG	3 cut(s)	486, 702, 848
Alw21I	GWGCWC	1 cut(s)	582
Alw26I	GTCTC	3 cut(s)	82, 124, 2090
AlwI	GGATC	7 cut(s)	655, 911, 924, 980, 1094, 2431, 2444
AlwNI	CAGNNNCTG	4 cut(s)	855, 1157, 2375, 2498
Ama87I	CYCGRG	3 cut(s)	1458, 1759, 2402
AoxI	GGCC	9 cut(s)	3, 484, 682, 982, 1671, 1793, 1944, 2112, 2198
ApeKI	GCWGC	9 cut(s)	415, 855, 858, 1492, 2129, 2249, 2492, 2495, 2498
ApoI	RAATTY	2 cut(s)	1287, 1384
AseI	ATTAAT	1 cut(s)	2031
AspA2I	CCTAGG	1 cut(s)	2600
AspLEI	GCGC	3 cut(s)	275, 828, 1743
AspS9I	GGNCC	8 cut(s)	647, 682, 1268, 1672, 1944, 2198, 2341, 2545
AsuC2I	CCSGG	1 cut(s)	251
AsuHPI	GGTGA	3 cut(s)	1206, 1689, 2164
AvaI	CYCGRG	3 cut(s)	1458, 1759, 2402
AvaII	GGWCC	4 cut(s)	647, 1268, 2341, 2545
AvrII	CCTAGG	1 cut(s)	2600
BaeI	ACNNNNGTAYC	2 cut(s)	1974, 2007
BamHI	GGATCC	2 cut(s)	916, 2436
BanI	GGYRCC	2 cut(s)	1740, 2594
BauI	CACGAG	1 cut(s)	821
BbsI	GAAGAC	3 cut(s)	305, 414, 1398
Bbv12I	GWGCWC	1 cut(s)	582
BbvCI	CCTCAGC	1 cut(s)	2109
BbvI	GCAGC	9 cut(s)	427, 842, 870, 1504, 2116, 2261, 2482, 2485, 2504
BccI	CCATC	5 cut(s)	160, 1462, 1504, 1756, 2332
BciT130I	CCWGG	3 cut(s)	488, 704, 850
BcnI	CCSGG	1 cut(s)	251
BcoDI	GTCTC	3 cut(s)	82, 124, 2090
BfaI	CTAG	9 cut(s)	426, 665, 1379, 1430, 1530, 1752, 1832, 2327, 2601
BfmI	CTRYAG	4 cut(s)	81, 723, 856, 1977
BfoI	RGCGCY	3 cut(s)	276, 829, 1744
BfuAI	ACCTGC	2 cut(s)	149, 883
BglII	AGATCT	1 cut(s)	1426
BlnI	CCTAGG	1 cut(s)	2600
BmcAI	AGTACT	1 cut(s)	263
Bme1390I	CCNGG	4 cut(s)	251, 488, 704, 850
Bme18I	GGWCC	4 cut(s)	647, 1268, 2341, 2545
BmeT110I	CYCGRG	3 cut(s)	1458, 1759, 2402
BmgT120I	GGNCC	8 cut(s)	647, 682, 1268, 1672, 1944, 2198, 2341, 2545
BmiI	GGNNCC	8 cut(s)	918, 1324, 1674, 1742, 1945, 2343, 2438, 2596
BmrFI	CCNGG	4 cut(s)	251, 488, 704, 850
BmrI	ACTGGG	1 cut(s)	380
BmsI	GCATC	9 cut(s)	145, 301, 532, 557, 607, 941, 1285, 1309, 2236
BmuI	ACTGGG	1 cut(s)	380
BpiI	GAAGAC	3 cut(s)	305, 414, 1398
BplI	GAGNNNNNCTC	2 cut(s)	1276, 1308
BpmI	CTGGAG	1 cut(s)	923
Bpu10I	CCTNAGC	3 cut(s)	686, 2109, 2630
BpuEI	CTTGAG	4 cut(s)	575, 596, 1542, 2114
BpuMI	CCSGG	1 cut(s)	251
Bsa29I	ATCGAT	1 cut(s)	2027
BsaHI	GRCGYC	1 cut(s)	1741
BsaI	GGTCTC	1 cut(s)	82
BsaJI	CCNNGG	5 cut(s)	1668, 1760, 2115, 2403, 2600
BsaWI	WCCGGW	1 cut(s)	1102
BsaXI	ACNNNNNCTCC	4 cut(s)	1648, 1678, 2610, 2640
Bsc4I	CCNNNNNNNGG	5 cut(s)	901, 2238, 2350, 2351, 2409
Bse1I	ACTGG	6 cut(s)	375, 416, 920, 974, 1194, 1240
Bse3DI	GCAATG	2 cut(s)	315, 566
BseBI	CCWGG	3 cut(s)	488, 704, 850
BseCI	ATCGAT	1 cut(s)	2027
BseDI	CCNNGG	5 cut(s)	1668, 1760, 2115, 2403, 2600
BseGI	GGATG	2 cut(s)	622, 1300
BseLI	CCNNNNNNNGG	5 cut(s)	901, 2238, 2350, 2351, 2409
BseMI	GCAATG	2 cut(s)	315, 566
BseMII	CTCAG	7 cut(s)	117, 669, 1209, 1673, 1683, 2100, 2139
BseNI	ACTGG	6 cut(s)	375, 416, 920, 974, 1194, 1240
BseRI	GAGGAG	1 cut(s)	196
BseXI	GCAGC	9 cut(s)	427, 842, 870, 1504, 2116, 2261, 2482, 2485, 2504
BseYI	CCCAGC	1 cut(s)	519
BsgI	GTGCAG	1 cut(s)	2500
Bsh1236I	CGCG	1 cut(s)	1006
BshFI	GGCC	9 cut(s)	5, 486, 684, 984, 1673, 1795, 1946, 2114, 2200
BshNI	GGYRCC	2 cut(s)	1740, 2594
BshVI	ATCGAT	1 cut(s)	2027
BsiHKAI	GWGCWC	1 cut(s)	582
BsiHKCI	CYCGRG	3 cut(s)	1458, 1759, 2402
BsiSI	CCGG	4 cut(s)	251, 1103, 1891, 2592
BslFI	GGGAC	2 cut(s)	2214, 2549
BslI	CCNNNNNNNGG	5 cut(s)	901, 2238, 2350, 2351, 2409
BsmAI	GTCTC	3 cut(s)	82, 124, 2090
BsmFI	GGGAC	2 cut(s)	2214, 2549
BsmI	GAATGC	1 cut(s)	2005
BsnI	GGCC	9 cut(s)	5, 486, 684, 984, 1673, 1795, 1946, 2114, 2200
Bso31I	GGTCTC	1 cut(s)	82
BsoBI	CYCGRG	3 cut(s)	1458, 1759, 2402
Bsp1286I	GDGCHC	1 cut(s)	582
Bsp143I	GATC	9 cut(s)	628, 660, 916, 972, 1099, 1426, 1798, 2154, 2436
BspACI	CCGC	5 cut(s)	779, 1006, 1972, 2348, 2351
BspANI	GGCC	9 cut(s)	5, 486, 684, 984, 1673, 1795, 1946, 2114, 2200
BspCNI	CTCAG	7 cut(s)	118, 668, 1210, 1674, 1684, 2101, 2138
BspDI	ATCGAT	1 cut(s)	2027
BspFNI	CGCG	1 cut(s)	1006
BspHI	TCATGA	1 cut(s)	2281
BspLI	GGNNCC	8 cut(s)	918, 1324, 1674, 1742, 1945, 2343, 2438, 2596
BspMAI	CTGCAG	2 cut(s)	85, 860
BspMI	ACCTGC	2 cut(s)	149, 883
BspPI	GGATC	7 cut(s)	655, 911, 924, 980, 1094, 2431, 2444
BspQI	GCTCTTC	1 cut(s)	45
BspT107I	GGYRCC	2 cut(s)	1740, 2594
BspTNI	GGTCTC	1 cut(s)	82
BsrBI	CCGCTC	1 cut(s)	1974
BsrDI	GCAATG	2 cut(s)	315, 566
BsrI	ACTGG	6 cut(s)	375, 416, 920, 974, 1194, 1240
BssECI	CCNNGG	5 cut(s)	1668, 1760, 2115, 2403, 2600
BssMI	GATC	9 cut(s)	628, 660, 916, 972, 1099, 1426, 1798, 2154, 2436
BssNI	GRCGYC	1 cut(s)	1741
BssSI	CACGAG	1 cut(s)	821
BssT1I	CCWWGG	3 cut(s)	1668, 2115, 2600
Bst2BI	CACGAG	1 cut(s)	821
Bst2UI	CCWGG	3 cut(s)	488, 704, 850
Bst4CI	ACNGT	7 cut(s)	294, 504, 607, 991, 1048, 1660, 2525
Bst6I	CTCTTC	2 cut(s)	45, 273
BstACI	GRCGYC	1 cut(s)	1741
BstAPI	GCANNNNNTGC	2 cut(s)	1061, 2498
BstC8I	GCNNGC	4 cut(s)	846, 1149, 1353, 1439
BstF5I	GGATG	2 cut(s)	622, 1300
BstFNI	CGCG	1 cut(s)	1006
BstH2I	RGCGCY	3 cut(s)	276, 829, 1744
BstHHI	GCGC	3 cut(s)	275, 828, 1743
BstKTI	GATC	9 cut(s)	631, 663, 919, 975, 1102, 1429, 1801, 2157, 2439
BstMAI	GTCTC	3 cut(s)	82, 124, 2090
BstMBI	GATC	9 cut(s)	628, 660, 916, 972, 1099, 1426, 1798, 2154, 2436
BstMWI	GCNNNNNNNGC	7 cut(s)	1061, 1153, 1670, 2009, 2255, 2381, 2498
BstNI	CCWGG	3 cut(s)	488, 704, 850
BstNSI	RCATGY	2 cut(s)	1151, 1258
BstSCI	CCNGG	4 cut(s)	249, 486, 702, 848
BstSFI	CTRYAG	4 cut(s)	81, 723, 856, 1977
BstUI	CGCG	1 cut(s)	1006
BstV1I	GCAGC	9 cut(s)	427, 842, 870, 1504, 2116, 2261, 2482, 2485, 2504
BstV2I	GAAGAC	3 cut(s)	305, 414, 1398
BstX2I	RGATCY	4 cut(s)	660, 916, 1426, 2436
BstYI	RGATCY	4 cut(s)	660, 916, 1426, 2436
Bsu15I	ATCGAT	1 cut(s)	2027
BsuRI	GGCC	9 cut(s)	5, 486, 684, 984, 1673, 1795, 1946, 2114, 2200
BsuTUI	ATCGAT	1 cut(s)	2027
BtsCI	GGATG	2 cut(s)	622, 1300
BtsI	GCAGTG	3 cut(s)	1271, 1627, 2058
BtsIMutI	CAGTG	7 cut(s)	927, 987, 1044, 1201, 1271, 1627, 2058
BveI	ACCTGC	2 cut(s)	149, 883
Cac8I	GCNNGC	4 cut(s)	846, 1149, 1353, 1439
CaiI	CAGNNNCTG	4 cut(s)	855, 1157, 2375, 2498
CciI	TCATGA	1 cut(s)	2281
CfoI	GCGC	3 cut(s)	275, 828, 1743
Cfr13I	GGNCC	8 cut(s)	647, 682, 1268, 1672, 1944, 2198, 2341, 2545
ClaI	ATCGAT	1 cut(s)	2027
CseI	GACGC	3 cut(s)	1012, 1509, 1634
Csp6I	GTAC	5 cut(s)	262, 1422, 1535, 1554, 2323
CviAII	CATG	5 cut(s)	583, 1148, 1255, 2087, 2282
CviQI	GTAC	5 cut(s)	262, 1422, 1535, 1554, 2323
DinI	GGCGCC	1 cut(s)	1742
DpnI	GATC	9 cut(s)	630, 662, 918, 974, 1101, 1428, 1800, 2156, 2438
DpnII	GATC	9 cut(s)	628, 660, 916, 972, 1099, 1426, 1798, 2154, 2436
DraI	TTTAAA	1 cut(s)	1885
DrdI	GACNNNNNNGTC	1 cut(s)	1606
DseDI	GACNNNNNNGTC	1 cut(s)	1606
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	45, 273
EarI	CTCTTC	2 cut(s)	45, 273
Eco130I	CCWWGG	3 cut(s)	1668, 2115, 2600
Eco147I	AGGCCT	1 cut(s)	1795
Eco31I	GGTCTC	1 cut(s)	82
Eco32I	GATATC	4 cut(s)	174, 465, 493, 801
Eco47I	GGWCC	4 cut(s)	647, 1268, 2341, 2545
Eco57I	CTGAAG	3 cut(s)	278, 1410, 2623
Eco88I	CYCGRG	3 cut(s)	1458, 1759, 2402
EcoO109I	RGGNCCY	2 cut(s)	682, 2545
EcoRII	CCWGG	3 cut(s)	486, 702, 848
EcoRV	GATATC	4 cut(s)	174, 465, 493, 801
EcoT14I	CCWWGG	3 cut(s)	1668, 2115, 2600
EcoT22I	ATGCAT	1 cut(s)	566
EgeI	GGCGCC	1 cut(s)	1742
EheI	GGCGCC	1 cut(s)	1742
ErhI	CCWWGG	3 cut(s)	1668, 2115, 2600
FaeI	CATG	5 cut(s)	586, 1151, 1258, 2090, 2285
FalI	AAGNNNNNCTT	4 cut(s)	177, 209, 423, 455
FaqI	GGGAC	2 cut(s)	2214, 2549
FatI	CATG	5 cut(s)	582, 1147, 1254, 2086, 2281
FauI	CCCGC	1 cut(s)	2344
FblI	GTMKAC	2 cut(s)	1223, 1232
FokI	GGATG	2 cut(s)	629, 1287
FspBI	CTAG	9 cut(s)	426, 665, 1379, 1430, 1530, 1752, 1832, 2327, 2601
GlaI	GCGC	3 cut(s)	274, 827, 1742
GsaI	CCCAGC	1 cut(s)	523
GsuI	CTGGAG	1 cut(s)	923
HaeII	RGCGCY	3 cut(s)	276, 829, 1744
HaeIII	GGCC	9 cut(s)	5, 486, 684, 984, 1673, 1795, 1946, 2114, 2200
HapII	CCGG	4 cut(s)	251, 1103, 1891, 2592
HgaI	GACGC	3 cut(s)	1012, 1509, 1634
HhaI	GCGC	3 cut(s)	275, 828, 1743
Hin1I	GRCGYC	1 cut(s)	1741
Hin1II	CATG	5 cut(s)	586, 1151, 1258, 2090, 2285
Hin6I	GCGC	3 cut(s)	273, 826, 1741
HinP1I	GCGC	3 cut(s)	273, 826, 1741
HincII	GTYRAC	2 cut(s)	603, 2362
HindII	GTYRAC	2 cut(s)	603, 2362
HpaII	CCGG	4 cut(s)	251, 1103, 1891, 2592
HphI	GGTGA	3 cut(s)	1206, 1689, 2164
Hpy166II	GTNNAC	5 cut(s)	603, 1224, 1233, 1271, 2362
Hpy8I	GTNNAC	5 cut(s)	603, 1224, 1233, 1271, 2362
Hpy99I	CGWCG	1 cut(s)	1603
HpyAV	CCTTC	7 cut(s)	736, 1148, 1313, 2175, 2403, 2476, 2549
HpyCH4III	ACNGT	7 cut(s)	294, 504, 607, 991, 1048, 1660, 2525
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1061, 1153, 1670, 2009, 2255, 2381, 2498
Hsp92I	GRCGYC	1 cut(s)	1741
Hsp92II	CATG	5 cut(s)	586, 1151, 1258, 2090, 2285
HspAI	GCGC	3 cut(s)	273, 826, 1741
KasI	GGCGCC	1 cut(s)	1740
Kzo9I	GATC	9 cut(s)	628, 660, 916, 972, 1099, 1426, 1798, 2154, 2436
LguI	GCTCTTC	1 cut(s)	45
LmnI	GCTCC	6 cut(s)	397, 852, 904, 1669, 1974, 2558
Lsp1109I	GCAGC	9 cut(s)	427, 842, 870, 1504, 2116, 2261, 2482, 2485, 2504
LweI	GCATC	9 cut(s)	145, 301, 532, 557, 607, 941, 1285, 1309, 2236
MaeI	CTAG	9 cut(s)	426, 665, 1379, 1430, 1530, 1752, 1832, 2327, 2601
MaeIII	GTNAC	8 cut(s)	808, 1212, 1622, 1695, 1826, 2005, 2525, 2583
MalI	GATC	9 cut(s)	630, 662, 918, 974, 1101, 1428, 1800, 2156, 2438
MbiI	CCGCTC	1 cut(s)	1974
MboI	GATC	9 cut(s)	628, 660, 916, 972, 1099, 1426, 1798, 2154, 2436
MfeI	CAATTG	3 cut(s)	2052, 2070, 2418
MflI	RGATCY	4 cut(s)	660, 916, 1426, 2436
MhlI	GDGCHC	1 cut(s)	582
Mly113I	GGCGCC	1 cut(s)	1741
MlyI	GAGTC	6 cut(s)	295, 1085, 1229, 1703, 1724, 2236
MmeI	TCCRAC	2 cut(s)	625, 1321
Mph1103I	ATGCAT	1 cut(s)	566
MseI	TTAA	9 cut(s)	195, 287, 612, 1121, 1542, 1884, 2019, 2031, 2265
MslI	CAYNNNNRTG	1 cut(s)	1194
MspA1I	CMGCKG	2 cut(s)	2129, 2495
MspI	CCGG	4 cut(s)	251, 1103, 1891, 2592
MspR9I	CCNGG	4 cut(s)	251, 488, 704, 850
MunI	CAATTG	3 cut(s)	2052, 2070, 2418
Mva1269I	GAATGC	1 cut(s)	2005
MvaI	CCWGG	3 cut(s)	488, 704, 850
MvnI	CGCG	1 cut(s)	1006
MwoI	GCNNNNNNNGC	7 cut(s)	1061, 1153, 1670, 2009, 2255, 2381, 2498
NarI	GGCGCC	1 cut(s)	1741
NciI	CCSGG	1 cut(s)	251
NdeII	GATC	9 cut(s)	628, 660, 916, 972, 1099, 1426, 1798, 2154, 2436
NlaIII	CATG	5 cut(s)	586, 1151, 1258, 2090, 2285
NlaIV	GGNNCC	8 cut(s)	918, 1324, 1674, 1742, 1945, 2343, 2438, 2596
NmuCI	GTSAC	5 cut(s)	1212, 1622, 1695, 2005, 2583
NsiI	ATGCAT	1 cut(s)	566
NspI	RCATGY	2 cut(s)	1151, 1258
PaeI	GCATGC	1 cut(s)	1151
PaeR7I	CTCGAG	1 cut(s)	1458
PagI	TCATGA	1 cut(s)	2281
PaqCI	CACCTGC	1 cut(s)	149
PceI	AGGCCT	1 cut(s)	1795
PciI	ACATGT	1 cut(s)	1254
PciSI	GCTCTTC	1 cut(s)	45
PctI	GAATGC	1 cut(s)	2005
PfeI	GAWTC	7 cut(s)	323, 455, 709, 1172, 1205, 1603, 2083
PleI	GAGTC	6 cut(s)	295, 1084, 1228, 1702, 1723, 2235
PluTI	GGCGCC	1 cut(s)	1744
PpsI	GAGTC	6 cut(s)	295, 1084, 1228, 1702, 1723, 2235
PpuMI	RGGWCCY	1 cut(s)	2545
PscI	ACATGT	1 cut(s)	1254
PshBI	ATTAAT	1 cut(s)	2031
Psp5II	RGGWCCY	1 cut(s)	2545
Psp6I	CCWGG	3 cut(s)	486, 702, 848
PspFI	CCCAGC	1 cut(s)	519
PspGI	CCWGG	3 cut(s)	486, 702, 848
PspN4I	GGNNCC	8 cut(s)	918, 1324, 1674, 1742, 1945, 2343, 2438, 2596
PspPI	GGNCC	8 cut(s)	647, 682, 1268, 1672, 1944, 2198, 2341, 2545
PspPPI	RGGWCCY	1 cut(s)	2545
PstI	CTGCAG	2 cut(s)	85, 860
PstNI	CAGNNNCTG	4 cut(s)	855, 1157, 2375, 2498
PsuI	RGATCY	4 cut(s)	660, 916, 1426, 2436
PvuII	CAGCTG	2 cut(s)	2129, 2495
RsaI	GTAC	5 cut(s)	263, 1423, 1536, 1555, 2324
RsaNI	GTAC	5 cut(s)	262, 1422, 1535, 1554, 2323
RseI	CAYNNNNRTG	1 cut(s)	1194
SapI	GCTCTTC	1 cut(s)	45
SaqAI	TTAA	9 cut(s)	195, 287, 612, 1121, 1542, 1884, 2019, 2031, 2265
Sau3AI	GATC	9 cut(s)	628, 660, 916, 972, 1099, 1426, 1798, 2154, 2436
Sau96I	GGNCC	8 cut(s)	647, 682, 1268, 1672, 1944, 2198, 2341, 2545
ScaI	AGTACT	1 cut(s)	263
SchI	GAGTC	6 cut(s)	295, 1085, 1229, 1703, 1724, 2236
ScrFI	CCNGG	4 cut(s)	251, 488, 704, 850
SduI	GDGCHC	1 cut(s)	582
SfaNI	GCATC	9 cut(s)	145, 301, 532, 557, 607, 941, 1285, 1309, 2236
SfcI	CTRYAG	4 cut(s)	81, 723, 856, 1977
SfoI	GGCGCC	1 cut(s)	1742
Sfr274I	CTCGAG	1 cut(s)	1458
SinI	GGWCC	4 cut(s)	647, 1268, 2341, 2545
SlaI	CTCGAG	1 cut(s)	1458
SmiMI	CAYNNNNRTG	1 cut(s)	1194
SmlI	CTYRAG	5 cut(s)	554, 575, 1458, 1557, 2093
SmoI	CTYRAG	5 cut(s)	554, 575, 1458, 1557, 2093
SphI	GCATGC	1 cut(s)	1151
SseBI	AGGCCT	1 cut(s)	1795
SsiI	CCGC	5 cut(s)	779, 1006, 1972, 2348, 2351
SspDI	GGCGCC	1 cut(s)	1740
SspMI	CTAG	9 cut(s)	426, 665, 1379, 1430, 1530, 1752, 1832, 2327, 2601
StuI	AGGCCT	1 cut(s)	1795
StyD4I	CCNGG	4 cut(s)	249, 486, 702, 848
StyI	CCWWGG	3 cut(s)	1668, 2115, 2600
TaaI	ACNGT	7 cut(s)	294, 504, 607, 991, 1048, 1660, 2525
TaqI	TCGA	7 cut(s)	1459, 1598, 1726, 2027, 2157, 2393, 2451
TaqII	GACCGA	2 cut(s)	965, 1218
TatI	WGTACW	2 cut(s)	261, 1421
TauI	GCSGC	2 cut(s)	1009, 2351
TfiI	GAWTC	7 cut(s)	323, 455, 709, 1172, 1205, 1603, 2083
Tru1I	TTAA	9 cut(s)	195, 287, 612, 1121, 1542, 1884, 2019, 2031, 2265
Tru9I	TTAA	9 cut(s)	195, 287, 612, 1121, 1542, 1884, 2019, 2031, 2265
TscAI	CASTG	7 cut(s)	927, 994, 1051, 1201, 1278, 1627, 2065
TseFI	GTSAC	5 cut(s)	1212, 1622, 1695, 2005, 2583
TseI	GCWGC	9 cut(s)	415, 855, 858, 1492, 2129, 2249, 2492, 2495, 2498
Tsp45I	GTSAC	5 cut(s)	1212, 1622, 1695, 2005, 2583
TspDTI	ATGAA	9 cut(s)	357, 549, 606, 949, 1218, 1251, 1479, 2075, 2270
TspGWI	ACGGA	1 cut(s)	929
TspRI	CASTG	7 cut(s)	927, 994, 1051, 1201, 1278, 1627, 2065
VpaK11BI	GGWCC	4 cut(s)	647, 1268, 2341, 2545
VspI	ATTAAT	1 cut(s)	2031
XapI	RAATTY	2 cut(s)	1287, 1384
XbaI	TCTAGA	1 cut(s)	1429
XceI	RCATGY	2 cut(s)	1151, 1258
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1909, 1954
XhoI	CTCGAG	1 cut(s)	1458
XmaJI	CCTAGG	1 cut(s)	2600
XmiI	GTMKAC	2 cut(s)	1223, 1232
XspI	CTAG	9 cut(s)	426, 665, 1379, 1430, 1530, 1752, 1832, 2327, 2601
ZrmI	AGTACT	1 cut(s)	263
Zsp2I	ATGCAT	1 cut(s)	566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.