AT2G35840

Sucrose-phosphatase 1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
15053483 .. 15057426
3944 bp
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UTR
Exon/CDS
Intron
AT2G35840.3

Sequence Viewer

Length: 1269 bp
ATGGAGCGTCTAACATCTCCTCCTCGTTTGATGATTGTCTCTGATCTTGATCATACTATGGTTGATCATCATGATCCTGAGAATCTATCTCTGCTGAGATTCAATTCGTTGTGGGAACACGCTTATCGCCATGACTCTCTTCTTGTGTTTTCTACGGGAAGATCACCGACATTGTATAAAGAACTCAGAAAGGAGAAACCTTTGTTGACCCCTGATATTACCATTATGTCTGTAGGAACTGAGATTACTTATGGTAACTCTATGGTTCCTGATCATGGTTGGGTTGAGGCTCTGAACAATAAATGGGATTTGGGTATTGTCAAACAAGAAGCTAGCAACTTCCCTGAGTTAAAGCTTCAGGCAGAAACTGAGCAGAGGCCACACAAGGTTAGCTTTTATGTTGAAAAGAGTAAGGCTCAGGAAGTTACTAAGGAGCTATCACAGAGGTTCCTGAAACGTGGGCTGGATGTCAAAATAATTTACAGTGGAGGTATGGATTTGGATATTTTACCACAAGGTGCCGGAAAGGGACAAGCGCTTGCATATCTGCTGAAGAAACTGAAGACTGAGGGGAAACTCCCTGTCAATACTCTTGCTTGTGGCGACTCTGGGAATGATGCTGAGCTGTTTAGTATTCCCGATGTTTATGGTGTTATGGTAAGCAATGCTCAAGAAGAGCTGTTGAAGTGGCATGCTGAAAATGCAAAAGACAACCCTAAGGTAATCCATGCAAAGGAGAGGTGTGCAGGTGGGATTATACAAGCCATTGGTCACTTCAAGCTTGGTCCGAACCTTTCTCCAAGAGATGTCTCTGATTTCTTAGAGATCAAGGTGGAGAATGTGAACCCTGGTCACGAGGTTGTGAAGTTTTTTTTGTTCTACGAGAGATGGAGACGGGGCGAGGTTGAGAACTCTGAGGCATACACAGCAAGCCTCAAAGCTTCAGTTCACCCCGGTGGTGTGTTTGTCCATCCATCTGGTACTGAAAAATCTCTGAGAGATACCATCGATGAGCTGCGCAAGTACCATGGAGACAAACAAGGGAAGAAGTTTCGCGTTTGGGCAGATCAAGTCCTGGCAACAGACACTACTCCTGGGACATGGATAGTAAAGCTTGATAAATGGGAGCAAGATGGGGACGAACGAAGATGCTGCACAACAACTGTCAAATTCACCTCAAAGGAAGGGGAGGGATTGGTGTGGGAACATGTACAACAAACCTGGTCGAAAGAAACAATGGTGAAGGATGATAGCAGCTGGATCATCTGA

Protein Analysis

422

Amino Acids

47.85

Weight (kDa)

6.13

Isoelectric Point (pI)

30.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S6PP PF05116 9 - 260 1e-100 Sucrose-6F-phosphate phosphohydrolase
Hydrolase_3 PF08282 119 - 229 7.9e-13 haloacid dehalogenase-like hydrolase
S6PP_C PF08472 283 - 410 4.8e-57 Sucrose-6-phosphate phosphohydrolase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 737
Acc16I TGCGCA 1 cut(s) 1019
Acc36I ACCTGC 1 cut(s) 737
AccB1I GGYRCC 1 cut(s) 518
AccII CGCG 1 cut(s) 1056
AclWI GGATC 2 cut(s) 68, 1268
AcsI RAATTY 1 cut(s) 1169
AcuI CTGAAG 4 cut(s) 341, 572, 581, 927
AdeI CACNNNGTG 1 cut(s) 518
AfaI GTAC 3 cut(s) 982, 1025, 1212
AfeI AGCGCT 1 cut(s) 537
AfiI CCNNNNNNNGG 2 cut(s) 275, 733
AflIII ACRYGT 1 cut(s) 1207
AgsI TTSAA 4 cut(s) 103, 404, 685, 778
AjnI CCWGG 4 cut(s) 847, 1074, 1093, 1220
AleI CACNNNNGTG 1 cut(s) 954
Alw26I GTCTC 4 cut(s) 43, 814, 886, 1026
AlwI GGATC 2 cut(s) 68, 1268
AlwNI CAGNNNCTG 1 cut(s) 368
Aor51HI AGCGCT 1 cut(s) 537
AoxI GGCC 1 cut(s) 377
ApeKI GCWGC 3 cut(s) 1015, 1152, 1254
ApoI RAATTY 1 cut(s) 1169
AspLEI GCGC 2 cut(s) 538, 1020
AspS9I GGNCC 1 cut(s) 785
AsuC2I CCSGG 1 cut(s) 954
AsuHPI GGTGA 4 cut(s) 156, 941, 1165, 1252
AsuNHI GCTAGC 1 cut(s) 332
AvaII GGWCC 1 cut(s) 785
AxyI CCTNAGG 1 cut(s) 717
BanI GGYRCC 1 cut(s) 518
BauI CACGAG 1 cut(s) 854
BbsI GAAGAC 1 cut(s) 569
BbvI GCAGC 2 cut(s) 1002, 1139
BccI CCATC 5 cut(s) 882, 978, 982, 1013, 1127
BcgI CGANNNNNNTGC 2 cut(s) 1134, 1168
BciT130I CCWGG 4 cut(s) 849, 1076, 1095, 1222
BclI TGATCA 3 cut(s) 49, 64, 271
BcnI CCSGG 1 cut(s) 954
BcoDI GTCTC 4 cut(s) 43, 814, 886, 1026
BfaI CTAG 1 cut(s) 333
BfmI CTRYAG 1 cut(s) 231
BfoI RGCGCY 1 cut(s) 539
BfuAI ACCTGC 1 cut(s) 737
BisI GCNGC 3 cut(s) 1016, 1153, 1255
BlpI GCTNAGC 1 cut(s) 621
BlsI GCNGC 3 cut(s) 1017, 1154, 1256
Bme1390I CCNGG 5 cut(s) 849, 954, 1076, 1095, 1222
Bme18I GGWCC 1 cut(s) 785
BmgT120I GGNCC 1 cut(s) 785
BmiI GGNNCC 3 cut(s) 267, 449, 520
BmrFI CCNGG 5 cut(s) 849, 954, 1076, 1095, 1222
BmsI GCATC 2 cut(s) 607, 1139
BmtI GCTAGC 1 cut(s) 336
BpiI GAAGAC 1 cut(s) 569
BplI GAGNNNNNCTC 2 cut(s) 400, 432
Bpu10I CCTNAGC 1 cut(s) 417
Bpu1102I GCTNAGC 1 cut(s) 621
BpuEI CTTGAG 1 cut(s) 654
BpuMI CCSGG 1 cut(s) 954
Bsa29I ATCGAT 1 cut(s) 1008
BsaBI GATNNNNATC 1 cut(s) 48
BsaJI CCNNGG 4 cut(s) 847, 952, 1027, 1094
BsaXI ACNNNNNCTCC 1 cut(s) 34
Bsc4I CCNNNNNNNGG 2 cut(s) 275, 733
Bse21I CCTNAGG 1 cut(s) 717
Bse3DI GCAATG 1 cut(s) 670
Bse8I GATNNNNATC 1 cut(s) 48
BseBI CCWGG 4 cut(s) 849, 1076, 1095, 1222
BseCI ATCGAT 1 cut(s) 1008
BseDI CCNNGG 4 cut(s) 847, 952, 1027, 1094
BseGI GGATG 3 cut(s) 472, 970, 1252
BseJI GATNNNNATC 1 cut(s) 48
BseLI CCNNNNNNNGG 2 cut(s) 275, 733
BseMI GCAATG 1 cut(s) 670
BseRI GAGGAG 2 cut(s) 9, 12
BseXI GCAGC 2 cut(s) 1002, 1139
BsgI GTGCAG 2 cut(s) 765, 1138
Bsh1236I CGCG 1 cut(s) 1056
BshFI GGCC 1 cut(s) 379
BshNI GGYRCC 1 cut(s) 518
BshVI ATCGAT 1 cut(s) 1008
BsiSI CCGG 2 cut(s) 522, 954
BslFI GGGAC 3 cut(s) 543, 1111, 1151
BslI CCNNNNNNNGG 2 cut(s) 275, 733
BsmAI GTCTC 4 cut(s) 43, 814, 886, 1026
BsmBI CGTCTC 1 cut(s) 886
BsmFI GGGAC 3 cut(s) 543, 1111, 1151
BsnI GGCC 1 cut(s) 379
Bsp1407I TGTACA 1 cut(s) 1210
Bsp143I GATC 9 cut(s) 43, 49, 64, 73, 161, 271, 825, 1066, 1260
Bsp1720I GCTNAGC 1 cut(s) 621
Bsp19I CCATGG 1 cut(s) 1027
BspANI GGCC 1 cut(s) 379
BspDI ATCGAT 1 cut(s) 1008
BspFNI CGCG 1 cut(s) 1056
BspHI TCATGA 1 cut(s) 70
BspLI GGNNCC 3 cut(s) 267, 449, 520
BspMI ACCTGC 1 cut(s) 737
BspOI GCTAGC 1 cut(s) 336
BspPI GGATC 2 cut(s) 68, 1268
BspQI GCTCTTC 1 cut(s) 669
BspT107I GGYRCC 1 cut(s) 518
BsrDI GCAATG 1 cut(s) 670
BsrGI TGTACA 1 cut(s) 1210
BssECI CCNNGG 4 cut(s) 847, 952, 1027, 1094
BssMI GATC 9 cut(s) 43, 49, 64, 73, 161, 271, 825, 1066, 1260
BssSI CACGAG 1 cut(s) 854
BssT1I CCWWGG 1 cut(s) 1027
Bst2BI CACGAG 1 cut(s) 854
Bst2UI CCWGG 4 cut(s) 849, 1076, 1095, 1222
Bst4CI ACNGT 2 cut(s) 485, 1165
Bst6I CTCTTC 2 cut(s) 144, 669
BstAUI TGTACA 1 cut(s) 1210
BstC8I GCNNGC 4 cut(s) 334, 540, 693, 931
BstDSI CCRYGG 1 cut(s) 1027
BstF5I GGATG 3 cut(s) 472, 970, 1252
BstFNI CGCG 1 cut(s) 1056
BstH2I RGCGCY 1 cut(s) 539
BstHHI GCGC 2 cut(s) 538, 1020
BstKTI GATC 9 cut(s) 46, 52, 67, 76, 164, 274, 828, 1069, 1263
BstMAI GTCTC 4 cut(s) 43, 814, 886, 1026
BstMBI GATC 9 cut(s) 43, 49, 64, 73, 161, 271, 825, 1066, 1260
BstMWI GCNNNNNNNGC 2 cut(s) 701, 926
BstNI CCWGG 4 cut(s) 849, 1076, 1095, 1222
BstNSI RCATGY 2 cut(s) 695, 1211
BstSCI CCNGG 5 cut(s) 847, 952, 1074, 1093, 1220
BstSFI CTRYAG 1 cut(s) 231
BstUI CGCG 1 cut(s) 1056
BstV1I GCAGC 2 cut(s) 1002, 1139
BstV2I GAAGAC 1 cut(s) 569
BstXI CCANNNNNNTGG 1 cut(s) 977
Bsu15I ATCGAT 1 cut(s) 1008
Bsu36I CCTNAGG 1 cut(s) 717
BsuRI GGCC 1 cut(s) 379
BsuTUI ATCGAT 1 cut(s) 1008
BtgI CCRYGG 1 cut(s) 1027
BtsCI GGATG 3 cut(s) 472, 970, 1252
BtsIMutI CAGTG 1 cut(s) 490
BveI ACCTGC 1 cut(s) 737
Cac8I GCNNGC 4 cut(s) 334, 540, 693, 931
CaiI CAGNNNCTG 1 cut(s) 368
CciI TCATGA 1 cut(s) 70
CfoI GCGC 2 cut(s) 538, 1020
Cfr13I GGNCC 1 cut(s) 785
ClaI ATCGAT 1 cut(s) 1008
CsiI ACCWGGT 1 cut(s) 1220
Csp6I GTAC 3 cut(s) 981, 1024, 1211
CviAII CATG 8 cut(s) 71, 131, 275, 692, 728, 1028, 1101, 1208
CviQI GTAC 3 cut(s) 981, 1024, 1211
DpnI GATC 9 cut(s) 45, 51, 66, 75, 163, 273, 827, 1068, 1262
DpnII GATC 9 cut(s) 43, 49, 64, 73, 161, 271, 825, 1066, 1260
DraIII CACNNNGTG 1 cut(s) 518
Eam1104I CTCTTC 2 cut(s) 144, 669
EarI CTCTTC 2 cut(s) 144, 669
Eco130I CCWWGG 1 cut(s) 1027
Eco47I GGWCC 1 cut(s) 785
Eco47III AGCGCT 1 cut(s) 537
Eco57I CTGAAG 4 cut(s) 341, 572, 581, 927
Eco81I CCTNAGG 1 cut(s) 717
EcoRII CCWGG 4 cut(s) 847, 1074, 1093, 1220
EcoT14I CCWWGG 1 cut(s) 1027
ErhI CCWWGG 1 cut(s) 1027
Esp3I CGTCTC 1 cut(s) 886
FaeI CATG 8 cut(s) 74, 134, 278, 695, 731, 1031, 1104, 1211
FalI AAGNNNNNCTT 2 cut(s) 377, 409
FaqI GGGAC 3 cut(s) 543, 1111, 1151
FatI CATG 8 cut(s) 70, 130, 274, 691, 727, 1027, 1100, 1207
FbaI TGATCA 3 cut(s) 49, 64, 271
Fnu4HI GCNGC 3 cut(s) 1016, 1153, 1255
FokI GGATG 3 cut(s) 479, 957, 1259
Fsp4HI GCNGC 3 cut(s) 1016, 1153, 1255
FspBI CTAG 1 cut(s) 333
FspI TGCGCA 1 cut(s) 1019
GlaI GCGC 2 cut(s) 537, 1019
GluI GCNGC 3 cut(s) 1016, 1153, 1255
HaeII RGCGCY 1 cut(s) 539
HaeIII GGCC 1 cut(s) 379
HapII CCGG 2 cut(s) 522, 954
HhaI GCGC 2 cut(s) 538, 1020
Hin1II CATG 8 cut(s) 74, 134, 278, 695, 731, 1031, 1104, 1211
Hin6I GCGC 2 cut(s) 536, 1018
HinP1I GCGC 2 cut(s) 536, 1018
HincII GTYRAC 1 cut(s) 207
HindII GTYRAC 1 cut(s) 207
HindIII AAGCTT 4 cut(s) 353, 779, 939, 1112
HinfI GANTC 4 cut(s) 82, 99, 134, 605
HpaII CCGG 2 cut(s) 522, 954
HphI GGTGA 4 cut(s) 156, 941, 1165, 1252
Hpy166II GTNNAC 3 cut(s) 207, 844, 949
Hpy188I TCNGA 8 cut(s) 43, 188, 294, 789, 814, 916, 996, 1268
Hpy188III TCNNGA 9 cut(s) 47, 71, 77, 269, 419, 451, 638, 671, 854
Hpy8I GTNNAC 3 cut(s) 207, 844, 949
HpyAV CCTTC 2 cut(s) 1178, 1237
HpyCH4III ACNGT 2 cut(s) 485, 1165
HpyCH4IV ACGT 1 cut(s) 457
HpyCH4V TGCA 5 cut(s) 542, 704, 731, 746, 1155
HpyF10VI GCNNNNNNNGC 2 cut(s) 701, 926
HpySE526I ACGT 1 cut(s) 457
Hsp92II CATG 8 cut(s) 74, 134, 278, 695, 731, 1031, 1104, 1211
HspAI GCGC 2 cut(s) 536, 1018
Ksp22I TGATCA 3 cut(s) 49, 64, 271
Kzo9I GATC 9 cut(s) 43, 49, 64, 73, 161, 271, 825, 1066, 1260
LguI GCTCTTC 1 cut(s) 669
LmnI GCTCC 3 cut(s) 4, 433, 1126
Lsp1109I GCAGC 2 cut(s) 1002, 1139
LweI GCATC 2 cut(s) 607, 1139
MabI ACCWGGT 1 cut(s) 1220
MaeI CTAG 1 cut(s) 333
MaeII ACGT 1 cut(s) 457
MaeIII GTNAC 4 cut(s) 254, 424, 770, 851
MalI GATC 9 cut(s) 45, 51, 66, 75, 163, 273, 827, 1068, 1262
MboI GATC 9 cut(s) 43, 49, 64, 73, 161, 271, 825, 1066, 1260
MboII GAAGA 7 cut(s) 131, 171, 565, 574, 686, 1057, 1158
MluCI AATT 3 cut(s) 103, 477, 1169
MlyI GAGTC 2 cut(s) 128, 599
MseI TTAA 1 cut(s) 350
MslI CAYNNNNRTG 1 cut(s) 954
MspA1I CMGCKG 1 cut(s) 1257
MspI CCGG 2 cut(s) 522, 954
MspR9I CCNGG 5 cut(s) 849, 954, 1076, 1095, 1222
MvaI CCWGG 4 cut(s) 849, 1076, 1095, 1222
MvnI CGCG 1 cut(s) 1056
MwoI GCNNNNNNNGC 2 cut(s) 701, 926
NciI CCSGG 1 cut(s) 954
NcoI CCATGG 1 cut(s) 1027
NdeII GATC 9 cut(s) 43, 49, 64, 73, 161, 271, 825, 1066, 1260
NheI GCTAGC 1 cut(s) 332
NlaIII CATG 8 cut(s) 74, 134, 278, 695, 731, 1031, 1104, 1211
NlaIV GGNNCC 3 cut(s) 267, 449, 520
NmuCI GTSAC 2 cut(s) 770, 851
NsbI TGCGCA 1 cut(s) 1019
NspI RCATGY 2 cut(s) 695, 1211
OliI CACNNNNGTG 1 cut(s) 954
PaeI GCATGC 1 cut(s) 695
PagI TCATGA 1 cut(s) 70
PaqCI CACCTGC 1 cut(s) 737
PciI ACATGT 1 cut(s) 1207
PciSI GCTCTTC 1 cut(s) 669
PfeI GAWTC 2 cut(s) 82, 99
PkrI GCNGC 3 cut(s) 1017, 1154, 1256
PleI GAGTC 2 cut(s) 128, 599
PpsI GAGTC 2 cut(s) 128, 599
PscI ACATGT 1 cut(s) 1207
Psp6I CCWGG 4 cut(s) 847, 1074, 1093, 1220
PspGI CCWGG 4 cut(s) 847, 1074, 1093, 1220
PspN4I GGNNCC 3 cut(s) 267, 449, 520
PspPI GGNCC 1 cut(s) 785
PsrI GAACNNNNNNTAC 2 cut(s) 229, 261
PstNI CAGNNNCTG 1 cut(s) 368
PvuII CAGCTG 1 cut(s) 1257
RsaI GTAC 3 cut(s) 982, 1025, 1212
RsaNI GTAC 3 cut(s) 981, 1024, 1211
RseI CAYNNNNRTG 1 cut(s) 954
SapI GCTCTTC 1 cut(s) 669
SaqAI TTAA 1 cut(s) 350
SatI GCNGC 3 cut(s) 1016, 1153, 1255
Sau3AI GATC 9 cut(s) 43, 49, 64, 73, 161, 271, 825, 1066, 1260
Sau96I GGNCC 1 cut(s) 785
SchI GAGTC 2 cut(s) 128, 599
ScrFI CCNGG 5 cut(s) 849, 954, 1076, 1095, 1222
SexAI ACCWGGT 1 cut(s) 1220
SfaNI GCATC 2 cut(s) 607, 1139
SfcI CTRYAG 1 cut(s) 231
SinI GGWCC 1 cut(s) 785
SmiMI CAYNNNNRTG 1 cut(s) 954
SmlI CTYRAG 1 cut(s) 669
SmoI CTYRAG 1 cut(s) 669
SphI GCATGC 1 cut(s) 695
Sse9I AATT 3 cut(s) 103, 477, 1169
SspMI CTAG 1 cut(s) 333
StyD4I CCNGG 5 cut(s) 847, 952, 1074, 1093, 1220
StyI CCWWGG 1 cut(s) 1027
TaaI ACNGT 2 cut(s) 485, 1165
TaiI ACGT 1 cut(s) 460
TaqI TCGA 2 cut(s) 1008, 1226
TasI AATT 3 cut(s) 103, 477, 1169
TatI WGTACW 1 cut(s) 1210
TfiI GAWTC 2 cut(s) 82, 99
Tru1I TTAA 1 cut(s) 350
Tru9I TTAA 1 cut(s) 350
TscAI CASTG 1 cut(s) 490
TseFI GTSAC 2 cut(s) 770, 851
TseI GCWGC 3 cut(s) 1015, 1152, 1254
Tsp45I GTSAC 2 cut(s) 770, 851
TspRI CASTG 1 cut(s) 490
VpaK11BI GGWCC 1 cut(s) 785
XapI RAATTY 1 cut(s) 1169
XceI RCATGY 2 cut(s) 695, 1211
XspI CTAG 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.