MD14G1044300.v1.1

sucrose-phosphatase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
4185492 .. 4189931
4440 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1044300.v1.1.491

Sequence Viewer

Length: 1434 bp
ATGCATACCTTTCAATCACTCACTTCGTCATCTCACTCTCTCCTTCCCCCAATTCCTCGAAAACCTAATAATCCCAATCTTCGATCCCCAATCGCTTCGAATCGGACTTTTGCTCTCAAGTTTCCAGTGCAGGTTTGCGTTGGGTATAGGATAGTCATGGATCGGCTCGAAGCTCCTGCCCGGCTAATGATAGTTTCAGATCTTGATCATACAATGGTTGATCATCACGACACTGAGAACCTTTCCCTGCTCAGATTCAATTCTTTGTGGGAAGCAAATTACCGTCACGATTCTCTGCTAGTTTTTTCAACTGGAAGGTCACCGACACTGTACAAAGAATTGAGGAAAGAGAAACCCATGTTAACTCCAGATATAACAATTATGTCTGTGGGAACCGAGATAACATATGGTAACACAATGGTTCCTGATGATGGCTGGGTTGAGGTTCTGAATAAAAAATGGGATAGGAACATAGTCAAGGAGGAAGCCAGCAAATTTTCTGAACTTAAACTTCAGGCAGAAACAGAGCAACGGCCACACAAGGTTAGCTTTTATGTTGAGAAAGCCAAGGCTCAGGAAGTGACAAAGGCTCTTTCAGAAGTTTTGGTAAAGCGTAGGTTGGATGTGAAGATAATCTATAGTGGAGGAATGGATTTGGATATATTACCACAAGGTGCTGGCAAAGGACAAGCTCTTGCATATTTGCTTAAGAAATTTAAGAGTGAGGGAAGGCCACCTGTTAACACTCTTGTTTGTGGTGACTCTGGAAATGATGCTGAGCTTTTTAGCATTCCAGAAGTATATGGTGTCATGGTTAGCAATGCCCAAGAAGAATTGTTGCATTGGCATGCTAAAAATGCTAAGGGTAACACTAGGATTATTCATGCAACAGAGAGATGTGCAGCTGGAATCATACAAGCCATTGGCCACTTTAAGCTAGGTCCGAGTTTGCCCCCAAGAGATATTGCAGATTTTTCTGACTATAAACTGGAGAATCCAAATCCTGGTCACGAACTAGTAAAGTTTTTCTTGTTCTATGAGAAATGGAGACGCGCAGAAGTTGAGAATTCAGAGATCTATTTGGCAAGTTTGAAAGCAGATTGCTCTCCATCCGGTACGTTTGTCCATCCTTCTGGAGTTGAGCACTCTCTTTCTGACAGCATAAATGCTCTGAGAAACTGCTACGGAGACAAACAGGGAAAACAATTTCGGGTTTGGGTGGATGGGGTATTAGCTACACATGTTGGTTCAAACACATGGCTAGTGAAGTTCGATAAGTGGGAATTATCTGGTGAAGAACGTTATGCAACAAAGGGAACAGCTGTTATAAGTTCAAAGGGTTCCGGTGTTTCAGTTGGTTTCACTTGGATTCGAGTGCACCAGACATGGTACAAAGGATACGAAGCAAAAGATGATTCAACGTGGTTCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

478

Amino Acids

53.8

Weight (kDa)

8.11

Isoelectric Point (pI)

33.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S6PP PF05116 61 - 312 6.2e-100 Sucrose-6F-phosphate phosphohydrolase
Hydrolase_3 PF08282 151 - 280 8.2e-12 haloacid dehalogenase-like hydrolase
S6PP_C PF08472 335 - 464 4.4e-54 Sucrose-6-phosphate phosphohydrolase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1328
Acc36I ACCTGC 1 cut(s) 121
AccB7I CCANNNNNTGG 1 cut(s) 1004
AccII CGCG 1 cut(s) 1053
AclI AACGTT 1 cut(s) 1300
AclWI GGATC 2 cut(s) 78, 168
AcoI YGGCCR 2 cut(s) 533, 925
AcsI RAATTY 3 cut(s) 494, 713, 1066
AcuI CTGAAG 1 cut(s) 497
AdeI CACNNNGTG 1 cut(s) 674
AfaI GTAC 3 cut(s) 332, 1117, 1391
AfiI CCNNNNNNNGG 2 cut(s) 431, 1004
AflII CTTAAG 1 cut(s) 707
AflIII ACRYGT 1 cut(s) 1240
AgsI TTSAA 7 cut(s) 14, 259, 309, 1093, 1251, 1335, 1419
AhlI ACTAGT 1 cut(s) 1015
AjnI CCWGG 1 cut(s) 1003
AluBI AGCT 8 cut(s) 173, 549, 692, 781, 905, 937, 1235, 1322
AluI AGCT 8 cut(s) 173, 549, 692, 781, 905, 937, 1235, 1322
Alw21I GWGCWC 2 cut(s) 1146, 1380
Alw26I GTCTC 2 cut(s) 1042, 1182
Alw44I GTGCAC 1 cut(s) 1376
AlwI GGATC 2 cut(s) 78, 168
AoxI GGCC 3 cut(s) 533, 731, 925
ApaLI GTGCAC 1 cut(s) 1376
ApeKI GCWGC 1 cut(s) 902
ApoI RAATTY 3 cut(s) 494, 713, 1066
AspLEI GCGC 1 cut(s) 1055
AspS9I GGNCC 1 cut(s) 941
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 3 cut(s) 312, 770, 1304
AsuII TTCGAA 1 cut(s) 98
AvaII GGWCC 1 cut(s) 941
BaeGI GKGCMC 1 cut(s) 1380
BaeI ACNNNNGTAYC 2 cut(s) 1107, 1140
BalI TGGCCA 1 cut(s) 927
Bbv12I GWGCWC 2 cut(s) 1146, 1380
BbvI GCAGC 1 cut(s) 914
BccI CCATC 4 cut(s) 425, 1117, 1134, 1217
BceAI ACGGC 1 cut(s) 548
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 1 cut(s) 1005
BciVI GTATCC 1 cut(s) 1391
BclI TGATCA 2 cut(s) 205, 220
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 2 cut(s) 1042, 1182
BcuI ACTAGT 1 cut(s) 1015
BfaI CTAG 5 cut(s) 299, 873, 938, 1016, 1262
BfmI CTRYAG 1 cut(s) 637
BfrI CTTAAG 1 cut(s) 707
BfuAI ACCTGC 1 cut(s) 121
BfuI GTATCC 1 cut(s) 1391
BglII AGATCT 2 cut(s) 199, 1074
BisI GCNGC 1 cut(s) 903
BlpI GCTNAGC 1 cut(s) 777
BlsI GCNGC 1 cut(s) 904
Bme1390I CCNGG 2 cut(s) 181, 1005
Bme18I GGWCC 1 cut(s) 941
BmgT120I GGNCC 1 cut(s) 941
BmiI GGNNCC 3 cut(s) 394, 423, 1342
BmrFI CCNGG 2 cut(s) 181, 1005
BmsI GCATC 1 cut(s) 763
BpmI CTGGAG 3 cut(s) 351, 1010, 1155
Bpu10I CCTNAGC 2 cut(s) 573, 861
Bpu1102I GCTNAGC 1 cut(s) 777
Bpu14I TTCGAA 1 cut(s) 98
BpuEI CTTGAG 1 cut(s) 101
BpuMI CCSGG 1 cut(s) 181
BsaBI GATNNNNATC 1 cut(s) 204
BsaJI CCNNGG 1 cut(s) 567
BsaWI WCCGGW 2 cut(s) 1112, 1343
Bsc4I CCNNNNNNNGG 2 cut(s) 431, 1004
Bse1I ACTGG 3 cut(s) 125, 316, 993
Bse3DI GCAATG 1 cut(s) 826
Bse8I GATNNNNATC 1 cut(s) 204
BseBI CCWGG 1 cut(s) 1005
BseDI CCNNGG 1 cut(s) 567
BseGI GGATG 4 cut(s) 628, 1109, 1126, 1228
BseJI GATNNNNATC 1 cut(s) 204
BseLI CCNNNNNNNGG 2 cut(s) 431, 1004
BseMI GCAATG 1 cut(s) 826
BseMII CTCAG 5 cut(s) 225, 265, 587, 768, 1163
BseNI ACTGG 3 cut(s) 125, 316, 993
BseSI GKGCMC 1 cut(s) 1380
BseXI GCAGC 1 cut(s) 914
BseYI CCCAGC 1 cut(s) 435
BsgI GTGCAG 2 cut(s) 149, 921
Bsh1236I CGCG 1 cut(s) 1053
BshFI GGCC 3 cut(s) 535, 733, 927
BsiHKAI GWGCWC 2 cut(s) 1146, 1380
BsiSI CCGG 3 cut(s) 181, 1113, 1344
BslI CCNNNNNNNGG 2 cut(s) 431, 1004
BsmAI GTCTC 2 cut(s) 1042, 1182
BsmBI CGTCTC 1 cut(s) 1042
BsmI GAATGC 1 cut(s) 789
BsnI GGCC 3 cut(s) 535, 733, 927
Bsp119I TTCGAA 1 cut(s) 98
Bsp1286I GDGCHC 2 cut(s) 1146, 1380
Bsp1407I TGTACA 1 cut(s) 330
Bsp143I GATC 6 cut(s) 83, 160, 199, 205, 220, 1074
Bsp1720I GCTNAGC 1 cut(s) 777
BspANI GGCC 3 cut(s) 535, 733, 927
BspCNI CTCAG 5 cut(s) 226, 264, 586, 769, 1164
BspFNI CGCG 1 cut(s) 1053
BspLI GGNNCC 3 cut(s) 394, 423, 1342
BspMI ACCTGC 1 cut(s) 121
BspPI GGATC 2 cut(s) 78, 168
BspT104I TTCGAA 1 cut(s) 98
BspTI CTTAAG 1 cut(s) 707
BsrDI GCAATG 1 cut(s) 826
BsrGI TGTACA 1 cut(s) 330
BsrI ACTGG 3 cut(s) 125, 316, 993
BssECI CCNNGG 1 cut(s) 567
BssMI GATC 6 cut(s) 83, 160, 199, 205, 220, 1074
BssT1I CCWWGG 1 cut(s) 567
Bst2UI CCWGG 1 cut(s) 1005
Bst4CI ACNGT 2 cut(s) 284, 330
BstAFI CTTAAG 1 cut(s) 707
BstAUI TGTACA 1 cut(s) 330
BstBI TTCGAA 1 cut(s) 98
BstC8I GCNNGC 3 cut(s) 490, 679, 849
BstDEI CTNAG 6 cut(s) 234, 251, 573, 777, 861, 1172
BstEII GGTNACC 1 cut(s) 318
BstF5I GGATG 4 cut(s) 628, 1109, 1126, 1228
BstFNI CGCG 1 cut(s) 1053
BstHHI GCGC 1 cut(s) 1055
BstKTI GATC 6 cut(s) 86, 163, 202, 208, 223, 1077
BstMAI GTCTC 2 cut(s) 1042, 1182
BstMBI GATC 6 cut(s) 83, 160, 199, 205, 220, 1074
BstMWI GCNNNNNNNGC 1 cut(s) 857
BstNI CCWGG 1 cut(s) 1005
BstNSI RCATGY 2 cut(s) 851, 1244
BstPI GGTNACC 1 cut(s) 318
BstSCI CCNGG 2 cut(s) 179, 1003
BstSFI CTRYAG 1 cut(s) 637
BstSLI GKGCMC 1 cut(s) 1380
BstUI CGCG 1 cut(s) 1053
BstV1I GCAGC 1 cut(s) 914
BstX2I RGATCY 2 cut(s) 199, 1074
BstXI CCANNNNNNTGG 1 cut(s) 1133
BstYI RGATCY 2 cut(s) 199, 1074
BsuI GTATCC 1 cut(s) 1391
BsuRI GGCC 3 cut(s) 535, 733, 927
BtsCI GGATG 4 cut(s) 628, 1109, 1126, 1228
BtsIMutI CAGTG 3 cut(s) 132, 231, 326
BveI ACCTGC 1 cut(s) 121
Cac8I GCNNGC 3 cut(s) 490, 679, 849
CfoI GCGC 1 cut(s) 1055
Cfr13I GGNCC 1 cut(s) 941
CseI GACGC 1 cut(s) 1059
Csp6I GTAC 3 cut(s) 331, 1116, 1390
CviAII CATG 8 cut(s) 157, 358, 811, 848, 884, 1241, 1257, 1386
CviQI GTAC 3 cut(s) 331, 1116, 1390
DdeI CTNAG 6 cut(s) 234, 251, 573, 777, 861, 1172
DpnI GATC 6 cut(s) 85, 162, 201, 207, 222, 1076
DpnII GATC 6 cut(s) 83, 160, 199, 205, 220, 1074
DraIII CACNNNGTG 1 cut(s) 674
EaeI YGGCCR 2 cut(s) 533, 925
Eco130I CCWWGG 1 cut(s) 567
Eco47I GGWCC 1 cut(s) 941
Eco57I CTGAAG 1 cut(s) 497
Eco91I GGTNACC 1 cut(s) 318
EcoO65I GGTNACC 1 cut(s) 318
EcoRI GAATTC 1 cut(s) 1066
EcoRII CCWGG 1 cut(s) 1003
EcoT14I CCWWGG 1 cut(s) 567
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 567
Esp3I CGTCTC 1 cut(s) 1042
FaeI CATG 8 cut(s) 160, 361, 814, 851, 887, 1244, 1260, 1389
FalI AAGNNNNNCTT 4 cut(s) 533, 565, 1013, 1045
FatI CATG 8 cut(s) 156, 357, 810, 847, 883, 1240, 1256, 1385
FauNDI CATATG 1 cut(s) 406
FbaI TGATCA 2 cut(s) 205, 220
Fnu4HI GCNGC 1 cut(s) 903
FokI GGATG 4 cut(s) 635, 1096, 1113, 1235
Fsp4HI GCNGC 1 cut(s) 903
FspBI CTAG 5 cut(s) 299, 873, 938, 1016, 1262
GlaI GCGC 1 cut(s) 1054
GluI GCNGC 1 cut(s) 903
GsaI CCCAGC 1 cut(s) 439
GsuI CTGGAG 3 cut(s) 351, 1010, 1155
HaeIII GGCC 3 cut(s) 535, 733, 927
HapII CCGG 3 cut(s) 181, 1113, 1344
HgaI GACGC 1 cut(s) 1059
HhaI GCGC 1 cut(s) 1055
Hin1II CATG 8 cut(s) 160, 361, 814, 851, 887, 1244, 1260, 1389
Hin6I GCGC 1 cut(s) 1053
HinP1I GCGC 1 cut(s) 1053
HincII GTYRAC 2 cut(s) 363, 742
HindII GTYRAC 2 cut(s) 363, 742
HinfI GANTC 8 cut(s) 100, 255, 290, 761, 909, 994, 1369, 1415
HpaI GTTAAC 2 cut(s) 363, 742
HpaII CCGG 3 cut(s) 181, 1113, 1344
HphI GGTGA 3 cut(s) 312, 770, 1304
Hpy166II GTNNAC 3 cut(s) 363, 742, 1378
Hpy8I GTNNAC 3 cut(s) 363, 742, 1378
HpyAV CCTTC 4 cut(s) 53, 309, 723, 1140
HpyCH4III ACNGT 2 cut(s) 284, 330
HpyCH4IV ACGT 3 cut(s) 1118, 1300, 1421
HpyCH4V TGCA 9 cut(s) 4, 130, 698, 841, 887, 902, 968, 1307, 1378
HpyF10VI GCNNNNNNNGC 1 cut(s) 857
HpyF3I CTNAG 6 cut(s) 234, 251, 573, 777, 861, 1172
HpySE526I ACGT 3 cut(s) 1118, 1300, 1421
Hsp92II CATG 8 cut(s) 160, 361, 814, 851, 887, 1244, 1260, 1389
HspAI GCGC 1 cut(s) 1053
Ksp22I TGATCA 2 cut(s) 205, 220
KspAI GTTAAC 2 cut(s) 363, 742
Kzo9I GATC 6 cut(s) 83, 160, 199, 205, 220, 1074
LmnI GCTCC 1 cut(s) 178
Lsp1109I GCAGC 1 cut(s) 914
LweI GCATC 1 cut(s) 763
MaeI CTAG 5 cut(s) 299, 873, 938, 1016, 1262
MaeII ACGT 3 cut(s) 1118, 1300, 1421
MaeIII GTNAC 7 cut(s) 284, 318, 410, 580, 758, 866, 1007
MalI GATC 6 cut(s) 85, 162, 201, 207, 222, 1076
MboI GATC 6 cut(s) 83, 160, 199, 205, 220, 1074
MboII GAAGA 5 cut(s) 71, 640, 842, 1307, 1420
MflI RGATCY 2 cut(s) 199, 1074
MhlI GDGCHC 2 cut(s) 1146, 1380
MlsI TGGCCA 1 cut(s) 927
MluNI TGGCCA 1 cut(s) 927
MlyI GAGTC 1 cut(s) 755
MmeI TCCRAC 1 cut(s) 600
MnlI CCTC 6 cut(s) 66, 336, 436, 475, 638, 718
Mox20I TGGCCA 1 cut(s) 927
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 1 cut(s) 927
MseI TTAA 6 cut(s) 362, 507, 708, 717, 741, 933
MslI CAYNNNNRTG 1 cut(s) 846
Msp20I TGGCCA 1 cut(s) 927
MspA1I CMGCKG 2 cut(s) 905, 1322
MspCI CTTAAG 1 cut(s) 707
MspI CCGG 3 cut(s) 181, 1113, 1344
MspR9I CCNGG 2 cut(s) 181, 1005
Mva1269I GAATGC 1 cut(s) 789
MvaI CCWGG 1 cut(s) 1005
MvnI CGCG 1 cut(s) 1053
MwoI GCNNNNNNNGC 1 cut(s) 857
NciI CCSGG 1 cut(s) 181
NdeI CATATG 1 cut(s) 406
NdeII GATC 6 cut(s) 83, 160, 199, 205, 220, 1074
NlaIII CATG 8 cut(s) 160, 361, 814, 851, 887, 1244, 1260, 1389
NlaIV GGNNCC 3 cut(s) 394, 423, 1342
NmuCI GTSAC 5 cut(s) 284, 318, 580, 758, 1007
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 851, 1244
NspV TTCGAA 1 cut(s) 98
PaeI GCATGC 1 cut(s) 851
PciI ACATGT 1 cut(s) 1240
PctI GAATGC 1 cut(s) 789
PfeI GAWTC 7 cut(s) 100, 255, 290, 909, 994, 1369, 1415
PflMI CCANNNNNTGG 1 cut(s) 1004
PkrI GCNGC 1 cut(s) 904
PleI GAGTC 1 cut(s) 755
PpsI GAGTC 1 cut(s) 755
PscI ACATGT 1 cut(s) 1240
PsiI TTATAA 1 cut(s) 1328
Psp1406I AACGTT 1 cut(s) 1300
Psp6I CCWGG 1 cut(s) 1003
PspEI GGTNACC 1 cut(s) 318
PspFI CCCAGC 1 cut(s) 435
PspGI CCWGG 1 cut(s) 1003
PspN4I GGNNCC 3 cut(s) 394, 423, 1342
PspPI GGNCC 1 cut(s) 941
PsuI RGATCY 2 cut(s) 199, 1074
PvuII CAGCTG 2 cut(s) 905, 1322
RsaI GTAC 3 cut(s) 332, 1117, 1391
RsaNI GTAC 3 cut(s) 331, 1116, 1390
RseI CAYNNNNRTG 1 cut(s) 846
SaqAI TTAA 6 cut(s) 362, 507, 708, 717, 741, 933
SatI GCNGC 1 cut(s) 903
Sau3AI GATC 6 cut(s) 83, 160, 199, 205, 220, 1074
Sau96I GGNCC 1 cut(s) 941
SchI GAGTC 1 cut(s) 755
ScrFI CCNGG 2 cut(s) 181, 1005
SduI GDGCHC 2 cut(s) 1146, 1380
SfaNI GCATC 1 cut(s) 763
SfcI CTRYAG 1 cut(s) 637
SfuI TTCGAA 1 cut(s) 98
SinI GGWCC 1 cut(s) 941
SmiMI CAYNNNNRTG 1 cut(s) 846
SmlI CTYRAG 2 cut(s) 116, 707
SmoI CTYRAG 2 cut(s) 116, 707
SpeI ACTAGT 1 cut(s) 1015
SphI GCATGC 1 cut(s) 851
SspMI CTAG 5 cut(s) 299, 873, 938, 1016, 1262
StyD4I CCNGG 2 cut(s) 179, 1003
StyI CCWWGG 1 cut(s) 567
TaaI ACNGT 2 cut(s) 284, 330
TaiI ACGT 3 cut(s) 1121, 1303, 1424
TaqI TCGA 6 cut(s) 58, 82, 98, 168, 1272, 1372
TatI WGTACW 1 cut(s) 330
TfiI GAWTC 7 cut(s) 100, 255, 290, 909, 994, 1369, 1415
Tru1I TTAA 6 cut(s) 362, 507, 708, 717, 741, 933
Tru9I TTAA 6 cut(s) 362, 507, 708, 717, 741, 933
TscAI CASTG 3 cut(s) 132, 238, 333
TseFI GTSAC 5 cut(s) 284, 318, 580, 758, 1007
TseI GCWGC 1 cut(s) 902
Tsp45I GTSAC 5 cut(s) 284, 318, 580, 758, 1007
TspDTI ATGAA 1 cut(s) 872
TspGWI ACGGA 1 cut(s) 1200
TspRI CASTG 3 cut(s) 132, 238, 333
Van91I CCANNNNNTGG 1 cut(s) 1004
Vha464I CTTAAG 1 cut(s) 707
VneI GTGCAC 1 cut(s) 1376
VpaK11BI GGWCC 1 cut(s) 941
XapI RAATTY 3 cut(s) 494, 713, 1066
XceI RCATGY 2 cut(s) 851, 1244
XspI CTAG 5 cut(s) 299, 873, 938, 1016, 1262
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.