AT2G36460

fructose-bisphosphate aldolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0001206
Physical Location & Seq
Reverse (-)
15296613 .. 15298754
2142 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G36460.2

Sequence Viewer

Length: 1077 bp
ATGTCTTCCTTCACCTCCAAATTCGCCGATGAGCTGATTGCTAACGCTGCTTACATCGGAACACCTGGAAAAGGTATCCTTGCGGCAGATGAATCAACTGGTACTATTGGGAAACGTCTCGCTAGCATCAACGTTGAGAACGTTGAATCCAACAGACGTGCTCTTCGTGAGCTTCTCTTCACTACTCCTGGAGCTCTTCCTTGCCTCAGTGGTGTTATCCTCTTTGAAGAAACTCTTTACCAGAAGAGCTCTGATGGTACGCCTTTTGTTGATATGTTGAAGAGTGCAGGAGTTTTGCCTGGTATTAAGGTTGATAAGGGTACCGTTGAGCTTGCTGGAACCAATGGTGAGACTACTACTCAAGGTCTTGATGGTCTTGGTGACCGTTGCAAGAAATACTACGAGGCTGGTGCTCGTTTCGCCAAGTGGCGTGCGGTTCTTAAGATTGGTGTTAATGAGCCATCTCAGTTAGCTATCCATGAGAACGCTTATGGATTGGCTAGGTATGCTGTCATTTGTCAGGAGAACGGTCTTGTGCCGATTGTGGAGCCTGAGATTCTTGTTGATGGCTCTCATGACATTCAGAAGTGTGCCGCGGTGACAGAGCGTGTTCTTGCAGCTTGCTACAAGGCTCTGAGTGATCACCATGTCTTGCTAGAAGGAACACTCTTGAAACCTAACATGGTTACTCCAGGATCAGAGAGTGCGAAGGTTGCACCAGAGGTGATTGCTGAGCACACTGTCCGTGCTCTTCAGAGGACAGTTCCAGCTGCTGTTCCAGCCATAGTGTTCTTGTCTGGTGGACAGAGCGAGGAAGAGGCGACAAGAAACCTTAACGCGATGAACCAGTTGAAGACAAAGAAGCCTTGGTCGTTGTCTTTCTCCTTTGGAAGGGCGTTGCAGCAGAGCACTTTGAAGACTTGGGGAGGAAAAGAGGAGAATGTGAAGAAGGCTCAAGAAGCGTTCTTGGTCAGATGCAAAGCTAACTCTGAAGCAACACTTGGTGCTTACAAGGGTGATGCTAAGCTCGGTGAAGGTGCAGCTGAGAGCCTTCACGTTAAGGATTACAAGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004332 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005740 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0005975 GO:0005996 GO:0006006 GO:0006082 GO:0006090 GO:0006091 GO:0006094 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016051 GO:0016052 GO:0016053 GO:0016310 GO:0016829 GO:0016830 GO:0016832 GO:0017144 GO:0018130 GO:0019318 GO:0019319 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0023052 GO:0030054 GO:0030312 GO:0031090 GO:0031930 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042221 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046364 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046686 GO:0046700 GO:0046872 GO:0046914 GO:0046939 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051716 GO:0055044 GO:0055086 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0080167 GO:0090407 GO:0098588 GO:0098805 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00030 ko00051 ko00680 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00010 map00030 map00051 map00680 map00710 map01100 map01110 map01120 map01130 map01200 map01230
Pfam Domains
Protein Families
Glycolytic

Protein Analysis

358

Amino Acids

38.39

Weight (kDa)

7.01

Isoelectric Point (pI)

28.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycolytic PF00274 1 - 267 5.2e-134 Fructose-bisphosphate aldolase class-I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 320
AccB1I GGYRCC 1 cut(s) 320
AccII CGCG 2 cut(s) 596, 839
AciI CCGC 4 cut(s) 83, 434, 594, 596
AclI AACGTT 2 cut(s) 132, 141
AclWI GGATC 1 cut(s) 703
AcsI RAATTY 1 cut(s) 20
AcuI CTGAAG 2 cut(s) 737, 1011
AdeI CACNNNGTG 1 cut(s) 1004
AfaI GTAC 4 cut(s) 103, 259, 322, 1073
AfiI CCNNNNNNNGG 2 cut(s) 71, 891
AflII CTTAAG 1 cut(s) 440
AgsI TTSAA 6 cut(s) 146, 227, 280, 673, 853, 916
AjiI CACGTC 1 cut(s) 158
AjnI CCWGG 4 cut(s) 64, 187, 298, 691
AjuI GAANNNNNNNTTGG 2 cut(s) 984, 1016
AloI GAACNNNNNNTCC 2 cut(s) 131, 163
Alw21I GWGCWC 7 cut(s) 163, 196, 251, 415, 738, 751, 911
Alw26I GTCTC 2 cut(s) 122, 344
AlwI GGATC 1 cut(s) 703
AlwNI CAGNNNCTG 1 cut(s) 773
ApeKI GCWGC 5 cut(s) 47, 617, 770, 901, 1040
ApoI RAATTY 1 cut(s) 20
ArsI GACNNNNNNTTYG 2 cut(s) 147, 179
Asp718I GGTACC 1 cut(s) 320
AsuHPI GGTGA 8 cut(s) 4, 359, 392, 610, 635, 736, 1028, 1043
AsuNHI GCTAGC 1 cut(s) 122
BanI GGYRCC 1 cut(s) 320
BanII GRGCYC 2 cut(s) 196, 251
BbsI GAAGAC 2 cut(s) 860, 923
Bbv12I GWGCWC 7 cut(s) 163, 196, 251, 415, 738, 751, 911
BbvI GCAGC 5 cut(s) 34, 629, 757, 913, 1052
BccI CCATC 4 cut(s) 248, 365, 469, 560
BcgI CGANNNNNNTGC 2 cut(s) 392, 426
BciT130I CCWGG 4 cut(s) 66, 189, 300, 693
BciVI GTATCC 1 cut(s) 86
BclI TGATCA 1 cut(s) 640
BcoDI GTCTC 2 cut(s) 122, 344
BfaI CTAG 3 cut(s) 123, 501, 656
BfrI CTTAAG 1 cut(s) 440
BfuI GTATCC 1 cut(s) 86
BisI GCNGC 7 cut(s) 48, 84, 594, 618, 771, 902, 1041
BlpI GCTNAGC 2 cut(s) 732, 1023
BlsI GCNGC 7 cut(s) 49, 85, 595, 619, 772, 903, 1042
BmcAI AGTACT 1 cut(s) 1073
Bme1390I CCNGG 4 cut(s) 66, 189, 300, 693
BmgBI CACGTC 1 cut(s) 158
BmiI GGNNCC 3 cut(s) 322, 340, 549
BmrFI CCNGG 4 cut(s) 66, 189, 300, 693
BmsI GCATC 3 cut(s) 135, 965, 1009
BmtI GCTAGC 1 cut(s) 126
BpiI GAAGAC 2 cut(s) 860, 923
BpmI CTGGAG 2 cut(s) 210, 675
Bpu1102I GCTNAGC 2 cut(s) 732, 1023
BpuEI CTTGAG 2 cut(s) 345, 939
BsaJI CCNNGG 2 cut(s) 594, 866
Bsc4I CCNNNNNNNGG 2 cut(s) 71, 891
Bse1I ACTGG 2 cut(s) 103, 847
BseBI CCWGG 4 cut(s) 66, 189, 300, 693
BseDI CCNNGG 2 cut(s) 594, 866
BseLI CCNNNNNNNGG 2 cut(s) 71, 891
BseMII CTCAG 6 cut(s) 220, 479, 543, 626, 723, 1035
BseNI ACTGG 2 cut(s) 103, 847
BseRI GAGGAG 1 cut(s) 950
BseXI GCAGC 5 cut(s) 34, 629, 757, 913, 1052
BsgI GTGCAG 2 cut(s) 306, 1059
Bsh1236I CGCG 2 cut(s) 596, 839
BshNI GGYRCC 1 cut(s) 320
BsiHKAI GWGCWC 7 cut(s) 163, 196, 251, 415, 738, 751, 911
BslI CCNNNNNNNGG 2 cut(s) 71, 891
BsmAI GTCTC 2 cut(s) 122, 344
BsmBI CGTCTC 1 cut(s) 122
Bsp1286I GDGCHC 7 cut(s) 163, 196, 251, 415, 738, 751, 911
Bsp143I GATC 2 cut(s) 640, 695
Bsp1720I GCTNAGC 2 cut(s) 732, 1023
BspACI CCGC 4 cut(s) 83, 434, 594, 596
BspCNI CTCAG 6 cut(s) 219, 478, 544, 627, 724, 1036
BspFNI CGCG 2 cut(s) 596, 839
BspHI TCATGA 1 cut(s) 574
BspLI GGNNCC 3 cut(s) 322, 340, 549
BspOI GCTAGC 1 cut(s) 126
BspPI GGATC 1 cut(s) 703
BspQI GCTCTTC 4 cut(s) 168, 201, 239, 756
BspT107I GGYRCC 1 cut(s) 320
BspTI CTTAAG 1 cut(s) 440
BsrI ACTGG 2 cut(s) 103, 847
BssECI CCNNGG 2 cut(s) 594, 866
BssMI GATC 2 cut(s) 640, 695
BssT1I CCWWGG 1 cut(s) 866
Bst2UI CCWGG 4 cut(s) 66, 189, 300, 693
Bst4CI ACNGT 5 cut(s) 325, 386, 530, 742, 763
Bst6I CTCTTC 7 cut(s) 168, 182, 201, 239, 275, 756, 810
BstAFI CTTAAG 1 cut(s) 440
BstC8I GCNNGC 4 cut(s) 124, 333, 432, 622
BstDEI CTNAG 7 cut(s) 206, 465, 552, 635, 732, 1023, 1044
BstDSI CCRYGG 1 cut(s) 594
BstEII GGTNACC 1 cut(s) 380
BstENI CCTNNNNNAGG 2 cut(s) 69, 889
BstFNI CGCG 2 cut(s) 596, 839
BstKTI GATC 2 cut(s) 643, 698
BstMAI GTCTC 2 cut(s) 122, 344
BstMBI GATC 2 cut(s) 640, 695
BstMWI GCNNNNNNNGC 6 cut(s) 47, 419, 506, 713, 779, 959
BstNI CCWGG 4 cut(s) 66, 189, 300, 693
BstPI GGTNACC 1 cut(s) 380
BstSCI CCNGG 4 cut(s) 64, 187, 298, 691
BstUI CGCG 2 cut(s) 596, 839
BstV1I GCAGC 5 cut(s) 34, 629, 757, 913, 1052
BstV2I GAAGAC 2 cut(s) 860, 923
BsuI GTATCC 1 cut(s) 86
BtgI CCRYGG 1 cut(s) 594
BtgZI GCGATG 1 cut(s) 854
BtrI CACGTC 1 cut(s) 158
BtsIMutI CAGTG 2 cut(s) 214, 738
Cac8I GCNNGC 4 cut(s) 124, 333, 432, 622
CaiI CAGNNNCTG 1 cut(s) 773
CciI TCATGA 1 cut(s) 574
Cfr42I CCGCGG 1 cut(s) 597
Csp6I GTAC 4 cut(s) 102, 258, 321, 1072
CviAII CATG 4 cut(s) 479, 575, 647, 682
CviQI GTAC 4 cut(s) 102, 258, 321, 1072
DdeI CTNAG 7 cut(s) 206, 465, 552, 635, 732, 1023, 1044
DpnI GATC 2 cut(s) 642, 697
DpnII GATC 2 cut(s) 640, 695
DraIII CACNNNGTG 1 cut(s) 1004
Eam1104I CTCTTC 7 cut(s) 168, 182, 201, 239, 275, 756, 810
EarI CTCTTC 7 cut(s) 168, 182, 201, 239, 275, 756, 810
Ecl136II GAGCTC 2 cut(s) 194, 249
Eco130I CCWWGG 1 cut(s) 866
Eco24I GRGCYC 2 cut(s) 196, 251
Eco53kI GAGCTC 2 cut(s) 194, 249
Eco57I CTGAAG 2 cut(s) 737, 1011
Eco91I GGTNACC 1 cut(s) 380
EcoICRI GAGCTC 2 cut(s) 194, 249
EcoNI CCTNNNNNAGG 2 cut(s) 69, 889
EcoO65I GGTNACC 1 cut(s) 380
EcoRII CCWGG 4 cut(s) 64, 187, 298, 691
EcoT14I CCWWGG 1 cut(s) 866
EcoT38I GRGCYC 2 cut(s) 196, 251
ErhI CCWWGG 1 cut(s) 866
Esp3I CGTCTC 1 cut(s) 122
FaeI CATG 4 cut(s) 482, 578, 650, 685
FaiI YATR 8 cut(s) 275, 480, 492, 507, 576, 648, 683, 785
FalI AAGNNNNNCTT 6 cut(s) 63, 95, 219, 251, 984, 1016
FatI CATG 4 cut(s) 478, 574, 646, 681
FbaI TGATCA 1 cut(s) 640
Fnu4HI GCNGC 7 cut(s) 48, 84, 594, 618, 771, 902, 1041
FriOI GRGCYC 2 cut(s) 196, 251
Fsp4HI GCNGC 7 cut(s) 48, 84, 594, 618, 771, 902, 1041
FspBI CTAG 3 cut(s) 123, 501, 656
GluI GCNGC 7 cut(s) 48, 84, 594, 618, 771, 902, 1041
GsuI CTGGAG 2 cut(s) 210, 675
Hin1II CATG 4 cut(s) 482, 578, 650, 685
HinfI GANTC 3 cut(s) 92, 146, 556
HphI GGTGA 8 cut(s) 4, 359, 392, 610, 635, 736, 1028, 1043
Hpy166II GTNNAC 1 cut(s) 803
Hpy188I TCNGA 8 cut(s) 59, 253, 585, 636, 700, 756, 974, 991
Hpy188III TCNNGA 6 cut(s) 167, 368, 521, 575, 670, 956
Hpy8I GTNNAC 1 cut(s) 803
HpyAV CCTTC 7 cut(s) 19, 653, 703, 885, 943, 1028, 1061
HpyCH4III ACNGT 5 cut(s) 325, 386, 530, 742, 763
HpyCH4IV ACGT 5 cut(s) 115, 132, 141, 157, 1056
HpyCH4V TGCA 7 cut(s) 287, 390, 617, 716, 901, 978, 1040
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 419, 506, 713, 779, 959
HpyF3I CTNAG 7 cut(s) 206, 465, 552, 635, 732, 1023, 1044
HpySE526I ACGT 5 cut(s) 115, 132, 141, 157, 1056
Hsp92II CATG 4 cut(s) 482, 578, 650, 685
KpnI GGTACC 1 cut(s) 324
Ksp22I TGATCA 1 cut(s) 640
KspI CCGCGG 1 cut(s) 597
Kzo9I GATC 2 cut(s) 640, 695
LguI GCTCTTC 4 cut(s) 168, 201, 239, 756
LmnI GCTCC 2 cut(s) 191, 547
Lsp1109I GCAGC 5 cut(s) 34, 629, 757, 913, 1052
LweI GCATC 3 cut(s) 135, 965, 1009
MaeI CTAG 3 cut(s) 123, 501, 656
MaeII ACGT 5 cut(s) 115, 132, 141, 157, 1056
MaeIII GTNAC 3 cut(s) 380, 598, 685
MalI GATC 2 cut(s) 642, 697
MboI GATC 2 cut(s) 640, 695
MhlI GDGCHC 7 cut(s) 163, 196, 251, 415, 738, 751, 911
MluCI AATT 1 cut(s) 20
MmeI TCCRAC 1 cut(s) 174
MseI TTAA 5 cut(s) 306, 441, 453, 834, 1059
MspA1I CMGCKG 3 cut(s) 596, 770, 1043
MspCI CTTAAG 1 cut(s) 440
MspR9I CCNGG 4 cut(s) 66, 189, 300, 693
MvaI CCWGG 4 cut(s) 66, 189, 300, 693
MvnI CGCG 2 cut(s) 596, 839
MwoI GCNNNNNNNGC 6 cut(s) 47, 419, 506, 713, 779, 959
NdeII GATC 2 cut(s) 640, 695
NheI GCTAGC 1 cut(s) 122
NlaIII CATG 4 cut(s) 482, 578, 650, 685
NlaIV GGNNCC 3 cut(s) 322, 340, 549
NmuCI GTSAC 2 cut(s) 380, 598
PagI TCATGA 1 cut(s) 574
PciSI GCTCTTC 4 cut(s) 168, 201, 239, 756
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 163
PfeI GAWTC 3 cut(s) 92, 146, 556
PfoI TCCNGGA 2 cut(s) 187, 691
PkrI GCNGC 7 cut(s) 49, 85, 595, 619, 772, 903, 1042
Psp124BI GAGCTC 2 cut(s) 196, 251
Psp1406I AACGTT 2 cut(s) 132, 141
Psp6I CCWGG 4 cut(s) 64, 187, 298, 691
PspEI GGTNACC 1 cut(s) 380
PspGI CCWGG 4 cut(s) 64, 187, 298, 691
PspN4I GGNNCC 3 cut(s) 322, 340, 549
PstNI CAGNNNCTG 1 cut(s) 773
PvuII CAGCTG 2 cut(s) 770, 1043
RsaI GTAC 4 cut(s) 103, 259, 322, 1073
RsaNI GTAC 4 cut(s) 102, 258, 321, 1072
SacI GAGCTC 2 cut(s) 196, 251
SacII CCGCGG 1 cut(s) 597
SapI GCTCTTC 4 cut(s) 168, 201, 239, 756
SaqAI TTAA 5 cut(s) 306, 441, 453, 834, 1059
SatI GCNGC 7 cut(s) 48, 84, 594, 618, 771, 902, 1041
Sau3AI GATC 2 cut(s) 640, 695
ScaI AGTACT 1 cut(s) 1073
ScrFI CCNGG 4 cut(s) 66, 189, 300, 693
SduI GDGCHC 7 cut(s) 163, 196, 251, 415, 738, 751, 911
SfaNI GCATC 3 cut(s) 135, 965, 1009
Sfr303I CCGCGG 1 cut(s) 597
SgrBI CCGCGG 1 cut(s) 597
SmlI CTYRAG 3 cut(s) 360, 440, 954
SmoI CTYRAG 3 cut(s) 360, 440, 954
Sse9I AATT 1 cut(s) 20
SsiI CCGC 4 cut(s) 83, 434, 594, 596
SspMI CTAG 3 cut(s) 123, 501, 656
SstI GAGCTC 2 cut(s) 196, 251
StyD4I CCNGG 4 cut(s) 64, 187, 298, 691
StyI CCWWGG 1 cut(s) 866
TaaI ACNGT 5 cut(s) 325, 386, 530, 742, 763
TaiI ACGT 5 cut(s) 118, 135, 144, 160, 1059
TasI AATT 1 cut(s) 20
TatI WGTACW 1 cut(s) 1071
TauI GCSGC 2 cut(s) 86, 596
TfiI GAWTC 3 cut(s) 92, 146, 556
Tru1I TTAA 5 cut(s) 306, 441, 453, 834, 1059
Tru9I TTAA 5 cut(s) 306, 441, 453, 834, 1059
TscAI CASTG 2 cut(s) 214, 745
TseFI GTSAC 2 cut(s) 380, 598
TseI GCWGC 5 cut(s) 47, 617, 770, 901, 1040
Tsp45I GTSAC 2 cut(s) 380, 598
TspDTI ATGAA 2 cut(s) 105, 857
TspGWI ACGGA 1 cut(s) 734
TspRI CASTG 2 cut(s) 214, 745
Vha464I CTTAAG 1 cut(s) 440
XagI CCTNNNNNAGG 2 cut(s) 69, 889
XapI RAATTY 1 cut(s) 20
XspI CTAG 3 cut(s) 123, 501, 656
ZrmI AGTACT 1 cut(s) 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.