Prupe.7G116500_v2.0.a1

fructose-bisphosphate aldolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0001206
Physical Location & Seq
Reverse (-)
14159140 .. 14162122
2983 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G116500.1

Sequence Viewer

Length: 1077 bp
ATGTCTGCTTTCAGGGGCAAATACGCTGATGAGCTCATTGCCAATGCTGCCTACATTGGCACCCCTGGAAAGGGTATTCTTGCTGCTGATGAGTCAACTGGAACAATCGGCAAACGTTTTGCCAGCATCAATGTTGAGAATGTTGAATCAAACAGGCGTGCTCTTCGTGAGCTCCTCTTCACCGCCCCTGATGTGCTCCAATACCTTAGTGGAGTGATTCTCTTTGAAGAAACTCTCTACCAGAAGACAGCCTCAGGCAAGCCATTCGTTGATGTCTTGAAGGAAGGAGGTGTTCTACCTGGAATCAAGGTTGACAAGGGCACCGTTGAGCTTGCCGGAACCAATGGTGAGACCACAACCCAGGGTCTAGATGGGCTCGCCCAGCGTTGCCAAAAGTACTATGAAGCTGGTGCCAGGTTCGCAAAATGGCGTGCTGTCCTCAAGATTGGTCCCAATGAGCCATCTCAGCTGTCCATTAACGAAAACGCTAATGGCTTGGCTCGGTATGCTATCATTTGCCAGGAGAATGGCCTAGTCCCCATCGTTGAGCCAGAGATCCTGGTTGATGGACCCCATGACATCGAGAAGTGTGCTGATGTGACTGAGCGTGTTCTTGCTGCATGCTACAAGGCTCTTAATGACCACCACGTCCTCCTTGAAGGAACTCTCTTGAAGCCCAACATGGTTACTCCAGGATCTGATGCCAAGAAGGCTTCACCCGAAGTGATTGCTGAGTACACAGTCCGTGCCTTGTTGCGCACTACCCCTGCAGCTGTCCCTGCTGTGGTGTTCTTGTCTGGTGGCCAGAGTGAAGAGGAGGCTACCCTCAACCTTAATGCCATGAACAAGCTCAAGGGGAAGAAGCCATGGTCTCTTTCCTTCTCATTCGGAAGGGCTCTTCAGCAGAGCACACTTAAAGCCTGGGCAGGAAAGGAGGAAAACATTGGAAAGGCACAGGCTGCTCTCCTCACAAGGGCCAAGGCCAACTCAGAGGCTACCCTCGGAACATACAAGGGTGATGCAAAGCTTGGTGAAGGCGCTGCCGAGAGTCTTCATGTTAAGGATTACAAGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00030 ko00051 ko00680 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00010 map00030 map00051 map00680 map00710 map01100 map01110 map01120 map01130 map01200 map01230
Pfam Domains
Protein Families
Glycolytic

Protein Analysis

359

Amino Acids

38.41

Weight (kDa)

6.92

Isoelectric Point (pI)

28.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 647
Acc16I TGCGCA 1 cut(s) 758
AccB1I GGYRCC 3 cut(s) 59, 320, 410
AciI CCGC 1 cut(s) 183
AclI AACGTT 1 cut(s) 115
AclWI GGATC 2 cut(s) 550, 703
AcoI YGGCCR 1 cut(s) 802
AcuI CTGAAG 1 cut(s) 884
AfaI GTAC 3 cut(s) 398, 737, 1073
AfiI CCNNNNNNNGG 4 cut(s) 70, 71, 784, 973
AgsI TTSAA 5 cut(s) 146, 227, 280, 659, 673
AjiI CACGTC 1 cut(s) 649
AjnI CCWGG 8 cut(s) 64, 298, 360, 413, 519, 558, 691, 920
AluBI AGCT 8 cut(s) 34, 172, 331, 407, 469, 773, 850, 1027
AluI AGCT 8 cut(s) 34, 172, 331, 407, 469, 773, 850, 1027
Alw21I GWGCWC 5 cut(s) 36, 163, 174, 198, 911
Alw26I GTCTC 2 cut(s) 344, 876
AlwI GGATC 2 cut(s) 550, 703
AlwNI CAGNNNCTG 1 cut(s) 698
AoxI GGCC 4 cut(s) 529, 802, 975, 981
ApeKI GCWGC 6 cut(s) 47, 83, 617, 770, 959, 1040
AspLEI GCGC 2 cut(s) 759, 1040
AspS9I GGNCC 3 cut(s) 449, 569, 975
AsuHPI GGTGA 5 cut(s) 172, 359, 708, 1028, 1043
AvaII GGWCC 2 cut(s) 449, 569
AxyI CCTNAGG 1 cut(s) 253
BaeGI GKGCMC 1 cut(s) 323
BalI TGGCCA 1 cut(s) 804
BanI GGYRCC 3 cut(s) 59, 320, 410
BanII GRGCYC 4 cut(s) 36, 174, 378, 898
BbsI GAAGAC 2 cut(s) 251, 1043
Bbv12I GWGCWC 5 cut(s) 36, 163, 174, 198, 911
BbvI GCAGC 6 cut(s) 34, 70, 604, 782, 946, 1027
BccI CCATC 4 cut(s) 365, 469, 548, 560
BcgI CGANNNNNNTGC 6 cut(s) 247, 281, 572, 606, 710, 744
BciT130I CCWGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
BcoDI GTCTC 2 cut(s) 344, 876
BfaI CTAG 2 cut(s) 368, 533
BfmI CTRYAG 1 cut(s) 768
BfoI RGCGCY 1 cut(s) 1041
BglI GCCNNNNNGGC 1 cut(s) 710
BisI GCNGC 6 cut(s) 48, 84, 618, 771, 960, 1041
BlsI GCNGC 6 cut(s) 49, 85, 619, 772, 961, 1042
BmcAI AGTACT 2 cut(s) 398, 1073
Bme1390I CCNGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
Bme18I GGWCC 2 cut(s) 449, 569
BmgBI CACGTC 1 cut(s) 649
BmgT120I GGNCC 3 cut(s) 449, 569, 975
BmiI GGNNCC 6 cut(s) 61, 322, 340, 412, 451, 571
BmrFI CCNGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
BmsI GCATC 3 cut(s) 135, 691, 1009
BpiI GAAGAC 2 cut(s) 251, 1043
BplI GAGNNNNNCTC 2 cut(s) 204, 236
BpmI CTGGAG 1 cut(s) 675
BpuEI CTTGAG 2 cut(s) 425, 836
BsaI GGTCTC 2 cut(s) 344, 876
BsaJI CCNNGG 7 cut(s) 64, 360, 361, 866, 921, 978, 1000
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 71, 784, 973
Bse1I ACTGG 1 cut(s) 103
Bse21I CCTNAGG 1 cut(s) 253
Bse3DI GCAATG 1 cut(s) 36
BseBI CCWGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
BseDI CCNNGG 7 cut(s) 64, 360, 361, 866, 921, 978, 1000
BseLI CCNNNNNNNGG 4 cut(s) 70, 71, 784, 973
BseMI GCAATG 1 cut(s) 36
BseMII CTCAG 5 cut(s) 267, 479, 594, 723, 1002
BseNI ACTGG 1 cut(s) 103
BseRI GAGGAG 3 cut(s) 164, 830, 956
BseSI GKGCMC 1 cut(s) 323
BseXI GCAGC 6 cut(s) 34, 70, 604, 782, 946, 1027
BseYI CCCAGC 1 cut(s) 381
BshFI GGCC 4 cut(s) 531, 804, 977, 983
BshNI GGYRCC 3 cut(s) 59, 320, 410
BsiHKAI GWGCWC 5 cut(s) 36, 163, 174, 198, 911
BsiSI CCGG 1 cut(s) 336
BslFI GGGAC 3 cut(s) 435, 521, 761
BslI CCNNNNNNNGG 4 cut(s) 70, 71, 784, 973
BsmAI GTCTC 2 cut(s) 344, 876
BsmFI GGGAC 3 cut(s) 435, 521, 761
BsnI GGCC 4 cut(s) 531, 804, 977, 983
Bso31I GGTCTC 2 cut(s) 344, 876
Bsp1286I GDGCHC 8 cut(s) 36, 163, 174, 198, 323, 378, 898, 911
Bsp143I GATC 2 cut(s) 555, 695
Bsp19I CCATGG 1 cut(s) 866
BspACI CCGC 1 cut(s) 183
BspANI GGCC 4 cut(s) 531, 804, 977, 983
BspCNI CTCAG 5 cut(s) 266, 478, 595, 724, 1001
BspLI GGNNCC 6 cut(s) 61, 322, 340, 412, 451, 571
BspMAI CTGCAG 1 cut(s) 772
BspPI GGATC 2 cut(s) 550, 703
BspQI GCTCTTC 2 cut(s) 168, 903
BspT107I GGYRCC 3 cut(s) 59, 320, 410
BspTNI GGTCTC 2 cut(s) 344, 876
BsrDI GCAATG 1 cut(s) 36
BsrI ACTGG 1 cut(s) 103
BssECI CCNNGG 7 cut(s) 64, 360, 361, 866, 921, 978, 1000
BssMI GATC 2 cut(s) 555, 695
BssT1I CCWWGG 2 cut(s) 866, 978
Bst2UI CCWGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
Bst4CI ACNGT 2 cut(s) 325, 742
Bst6I CTCTTC 4 cut(s) 168, 182, 807, 903
BstAPI GCANNNNNTGC 1 cut(s) 959
BstC8I GCNNGC 7 cut(s) 124, 159, 260, 333, 378, 432, 622
BstDEI CTNAG 6 cut(s) 206, 253, 465, 603, 732, 988
BstDSI CCRYGG 1 cut(s) 866
BstH2I RGCGCY 1 cut(s) 1041
BstHHI GCGC 2 cut(s) 759, 1040
BstKTI GATC 2 cut(s) 558, 698
BstMAI GTCTC 2 cut(s) 344, 876
BstMBI GATC 2 cut(s) 555, 695
BstMWI GCNNNNNNNGC 8 cut(s) 47, 382, 419, 466, 506, 710, 779, 959
BstNI CCWGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
BstNSI RCATGY 1 cut(s) 624
BstSCI CCNGG 8 cut(s) 64, 298, 360, 413, 519, 558, 691, 920
BstSFI CTRYAG 1 cut(s) 768
BstSLI GKGCMC 1 cut(s) 323
BstV1I GCAGC 6 cut(s) 34, 70, 604, 782, 946, 1027
BstV2I GAAGAC 2 cut(s) 251, 1043
BstX2I RGATCY 2 cut(s) 555, 695
BstXI CCANNNNNNTGG 1 cut(s) 527
BstYI RGATCY 2 cut(s) 555, 695
Bsu36I CCTNAGG 1 cut(s) 253
BsuRI GGCC 4 cut(s) 531, 804, 977, 983
BtgI CCRYGG 1 cut(s) 866
BtrI CACGTC 1 cut(s) 649
Cac8I GCNNGC 7 cut(s) 124, 159, 260, 333, 378, 432, 622
CaiI CAGNNNCTG 1 cut(s) 698
CfoI GCGC 2 cut(s) 759, 1040
Cfr13I GGNCC 3 cut(s) 449, 569, 975
Csp6I GTAC 3 cut(s) 397, 736, 1072
CviAII CATG 6 cut(s) 575, 621, 682, 841, 867, 1055
CviQI GTAC 3 cut(s) 397, 736, 1072
DdeI CTNAG 6 cut(s) 206, 253, 465, 603, 732, 988
DpnI GATC 2 cut(s) 557, 697
DpnII GATC 2 cut(s) 555, 695
DrdI GACNNNNNNGTC 1 cut(s) 647
DseDI GACNNNNNNGTC 1 cut(s) 647
EaeI YGGCCR 1 cut(s) 802
Eam1104I CTCTTC 4 cut(s) 168, 182, 807, 903
EarI CTCTTC 4 cut(s) 168, 182, 807, 903
Ecl136II GAGCTC 2 cut(s) 34, 172
Eco130I CCWWGG 2 cut(s) 866, 978
Eco24I GRGCYC 4 cut(s) 36, 174, 378, 898
Eco31I GGTCTC 2 cut(s) 344, 876
Eco47I GGWCC 2 cut(s) 449, 569
Eco53kI GAGCTC 2 cut(s) 34, 172
Eco57I CTGAAG 1 cut(s) 884
Eco81I CCTNAGG 1 cut(s) 253
EcoICRI GAGCTC 2 cut(s) 34, 172
EcoRII CCWGG 8 cut(s) 64, 298, 360, 413, 519, 558, 691, 920
EcoT14I CCWWGG 2 cut(s) 866, 978
EcoT38I GRGCYC 4 cut(s) 36, 174, 378, 898
ErhI CCWWGG 2 cut(s) 866, 978
FaeI CATG 6 cut(s) 578, 624, 685, 844, 870, 1058
FaiI YATR 9 cut(s) 402, 507, 576, 622, 683, 842, 868, 1009, 1056
FaqI GGGAC 3 cut(s) 435, 521, 761
FatI CATG 6 cut(s) 574, 620, 681, 840, 866, 1054
Fnu4HI GCNGC 6 cut(s) 48, 84, 618, 771, 960, 1041
FriOI GRGCYC 4 cut(s) 36, 174, 378, 898
Fsp4HI GCNGC 6 cut(s) 48, 84, 618, 771, 960, 1041
FspBI CTAG 2 cut(s) 368, 533
FspI TGCGCA 1 cut(s) 758
GlaI GCGC 2 cut(s) 758, 1039
GluI GCNGC 6 cut(s) 48, 84, 618, 771, 960, 1041
GsaI CCCAGC 1 cut(s) 385
GsuI CTGGAG 1 cut(s) 675
HaeII RGCGCY 1 cut(s) 1041
HaeIII GGCC 4 cut(s) 531, 804, 977, 983
HapII CCGG 1 cut(s) 336
HhaI GCGC 2 cut(s) 759, 1040
Hin1II CATG 6 cut(s) 578, 624, 685, 844, 870, 1058
Hin6I GCGC 2 cut(s) 757, 1038
HinP1I GCGC 2 cut(s) 757, 1038
HincII GTYRAC 2 cut(s) 96, 313
HindII GTYRAC 2 cut(s) 96, 313
HindIII AAGCTT 1 cut(s) 1025
HinfI GANTC 5 cut(s) 92, 146, 217, 303, 1048
HpaII CCGG 1 cut(s) 336
HphI GGTGA 5 cut(s) 172, 359, 708, 1028, 1043
Hpy166II GTNNAC 3 cut(s) 96, 313, 738
Hpy188I TCNGA 4 cut(s) 700, 890, 991, 1004
Hpy188III TCNNGA 6 cut(s) 167, 277, 368, 442, 583, 670
Hpy8I GTNNAC 3 cut(s) 96, 313, 738
HpyAV CCTTC 7 cut(s) 274, 278, 653, 703, 885, 889, 1028
HpyCH4III ACNGT 2 cut(s) 325, 742
HpyCH4IV ACGT 2 cut(s) 115, 648
HpyCH4V TGCA 3 cut(s) 620, 770, 1022
HpyF10VI GCNNNNNNNGC 8 cut(s) 47, 382, 419, 466, 506, 710, 779, 959
HpyF3I CTNAG 6 cut(s) 206, 253, 465, 603, 732, 988
HpySE526I ACGT 2 cut(s) 115, 648
Hsp92II CATG 6 cut(s) 578, 624, 685, 844, 870, 1058
HspAI GCGC 2 cut(s) 757, 1038
Kzo9I GATC 2 cut(s) 555, 695
LguI GCTCTTC 2 cut(s) 168, 903
LmnI GCTCC 2 cut(s) 177, 201
Lsp1109I GCAGC 6 cut(s) 34, 70, 604, 782, 946, 1027
LweI GCATC 3 cut(s) 135, 691, 1009
MaeI CTAG 2 cut(s) 368, 533
MaeII ACGT 2 cut(s) 115, 648
MaeIII GTNAC 2 cut(s) 598, 685
MalI GATC 2 cut(s) 557, 697
MboI GATC 2 cut(s) 555, 695
MboII GAAGA 8 cut(s) 155, 169, 239, 256, 824, 871, 890, 1043
MflI RGATCY 2 cut(s) 555, 695
MhlI GDGCHC 8 cut(s) 36, 163, 174, 198, 323, 378, 898, 911
MlsI TGGCCA 1 cut(s) 804
MluNI TGGCCA 1 cut(s) 804
MlyI GAGTC 2 cut(s) 101, 1057
Mox20I TGGCCA 1 cut(s) 804
MscI TGGCCA 1 cut(s) 804
MseI TTAA 5 cut(s) 477, 636, 834, 915, 1059
Msp20I TGGCCA 1 cut(s) 804
MspA1I CMGCKG 2 cut(s) 469, 773
MspI CCGG 1 cut(s) 336
MspR9I CCNGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
MvaI CCWGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
MwoI GCNNNNNNNGC 8 cut(s) 47, 382, 419, 466, 506, 710, 779, 959
NcoI CCATGG 1 cut(s) 866
NdeII GATC 2 cut(s) 555, 695
NlaIII CATG 6 cut(s) 578, 624, 685, 844, 870, 1058
NlaIV GGNNCC 6 cut(s) 61, 322, 340, 412, 451, 571
NmeAIII GCCGAG 1 cut(s) 1069
NmuCI GTSAC 1 cut(s) 598
NsbI TGCGCA 1 cut(s) 758
NspI RCATGY 1 cut(s) 624
PaeI GCATGC 1 cut(s) 624
PasI CCCWGGG 1 cut(s) 361
PciSI GCTCTTC 2 cut(s) 168, 903
PfeI GAWTC 3 cut(s) 146, 217, 303
PfoI TCCNGGA 1 cut(s) 691
PkrI GCNGC 6 cut(s) 49, 85, 619, 772, 961, 1042
PleI GAGTC 2 cut(s) 100, 1056
PpsI GAGTC 2 cut(s) 100, 1056
Psp124BI GAGCTC 2 cut(s) 36, 174
Psp1406I AACGTT 1 cut(s) 115
Psp6I CCWGG 8 cut(s) 64, 298, 360, 413, 519, 558, 691, 920
PspFI CCCAGC 1 cut(s) 381
PspGI CCWGG 8 cut(s) 64, 298, 360, 413, 519, 558, 691, 920
PspN4I GGNNCC 6 cut(s) 61, 322, 340, 412, 451, 571
PspPI GGNCC 3 cut(s) 449, 569, 975
PstI CTGCAG 1 cut(s) 772
PstNI CAGNNNCTG 1 cut(s) 698
PsuI RGATCY 2 cut(s) 555, 695
PvuII CAGCTG 2 cut(s) 469, 773
RsaI GTAC 3 cut(s) 398, 737, 1073
RsaNI GTAC 3 cut(s) 397, 736, 1072
SacI GAGCTC 2 cut(s) 36, 174
SapI GCTCTTC 2 cut(s) 168, 903
SaqAI TTAA 5 cut(s) 477, 636, 834, 915, 1059
SatI GCNGC 6 cut(s) 48, 84, 618, 771, 960, 1041
Sau3AI GATC 2 cut(s) 555, 695
Sau96I GGNCC 3 cut(s) 449, 569, 975
ScaI AGTACT 2 cut(s) 398, 1073
SchI GAGTC 2 cut(s) 101, 1057
ScrFI CCNGG 8 cut(s) 66, 300, 362, 415, 521, 560, 693, 922
SduI GDGCHC 8 cut(s) 36, 163, 174, 198, 323, 378, 898, 911
SfaNI GCATC 3 cut(s) 135, 691, 1009
SfcI CTRYAG 1 cut(s) 768
SinI GGWCC 2 cut(s) 449, 569
SmlI CTYRAG 2 cut(s) 440, 851
SmoI CTYRAG 2 cut(s) 440, 851
SphI GCATGC 1 cut(s) 624
SsiI CCGC 1 cut(s) 183
SspMI CTAG 2 cut(s) 368, 533
SstI GAGCTC 2 cut(s) 36, 174
StyD4I CCNGG 8 cut(s) 64, 298, 360, 413, 519, 558, 691, 920
StyI CCWWGG 2 cut(s) 866, 978
TaaI ACNGT 2 cut(s) 325, 742
TaiI ACGT 2 cut(s) 118, 651
TaqI TCGA 1 cut(s) 582
TatI WGTACW 3 cut(s) 396, 735, 1071
TfiI GAWTC 3 cut(s) 146, 217, 303
Tru1I TTAA 5 cut(s) 477, 636, 834, 915, 1059
Tru9I TTAA 5 cut(s) 477, 636, 834, 915, 1059
TseFI GTSAC 1 cut(s) 598
TseI GCWGC 6 cut(s) 47, 83, 617, 770, 959, 1040
Tsp45I GTSAC 1 cut(s) 598
TspDTI ATGAA 3 cut(s) 417, 857, 1043
TspGWI ACGGA 1 cut(s) 734
VpaK11BI GGWCC 2 cut(s) 449, 569
XbaI TCTAGA 1 cut(s) 367
XceI RCATGY 1 cut(s) 624
XcmI CCANNNNNNNNNTGG 2 cut(s) 206, 368
XspI CTAG 2 cut(s) 368, 533
ZrmI AGTACT 2 cut(s) 398, 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.