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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37035 |
| fragaria_vesca | FvH4_6g16100 |
| malus_domestica | MD04G1095900.v1.1 MD12G1115900.v1.1 |
| prunus_persica | Prupe.6G235000_v2.0.a1 |
| pyrus_communis | pycom04g09080 pycom12g11540 pycom15g07040 |
| rosa_chinensis | RchiOBHm_Chr3g0469941 |
| rosa_laevigata | RLG00000024311 |
| rosa_multiflora | Rmu_sc0008347.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00354980 Rroxscaffold_6G00411350 |
| rosa_rugosa | Rorug03G0105600 Rorug05G0154500 |
| rosa_samantha | Rh3AG154500 Rh3BG178600 Rh3CG169200 Rh3DG196500 |
| rosa_wichuraiana | Rw3G014560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 311 |
| AccB1I | GGYRCC | 1 cut(s) | 311 |
| AccI | GTMKAC | 1 cut(s) | 192 |
| AccII | CGCG | 4 cut(s) | 38, 40, 262, 304 |
| AccIII | TCCGGA | 1 cut(s) | 419 |
| AciI | CCGC | 7 cut(s) | 40, 49, 508, 534, 668, 995, 1196 |
| AclWI | GGATC | 3 cut(s) | 344, 627, 1159 |
| AcuI | CTGAAG | 2 cut(s) | 278, 644 |
| AfaI | GTAC | 4 cut(s) | 58, 313, 917, 941 |
| AgsI | TTSAA | 4 cut(s) | 268, 371, 831, 932 |
| AjiI | CACGTC | 1 cut(s) | 281 |
| AleI | CACNNNNGTG | 1 cut(s) | 279 |
| Alw21I | GWGCWC | 2 cut(s) | 286, 573 |
| Alw26I | GTCTC | 1 cut(s) | 542 |
| AlwI | GGATC | 3 cut(s) | 344, 627, 1159 |
| Aor13HI | TCCGGA | 1 cut(s) | 419 |
| ApeKI | GCWGC | 4 cut(s) | 511, 665, 701, 1220 |
| Asp718I | GGTACC | 1 cut(s) | 311 |
| AspLEI | GCGC | 3 cut(s) | 40, 264, 306 |
| AsuHPI | GGTGA | 4 cut(s) | 266, 381, 697, 727 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1050, 1083 |
| BanI | GGYRCC | 1 cut(s) | 311 |
| BanII | GRGCYC | 1 cut(s) | 573 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 784, 816 |
| BbsI | GAAGAC | 2 cut(s) | 531, 549 |
| Bbv12I | GWGCWC | 2 cut(s) | 286, 573 |
| BbvI | GCAGC | 4 cut(s) | 523, 677, 688, 1232 |
| BccI | CCATC | 5 cut(s) | 401, 705, 867, 1241, 1283 |
| BcoDI | GTCTC | 1 cut(s) | 542 |
| BfaI | CTAG | 2 cut(s) | 650, 722 |
| BlpI | GCTNAGC | 1 cut(s) | 44 |
| BmcAI | AGTACT | 1 cut(s) | 941 |
| BmgBI | CACGTC | 1 cut(s) | 281 |
| BmiI | GGNNCC | 1 cut(s) | 313 |
| BmsI | GCATC | 4 cut(s) | 877, 966, 1078, 1225 |
| BpiI | GAAGAC | 2 cut(s) | 531, 549 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 44 |
| BpuEI | CTTGAG | 1 cut(s) | 536 |
| Bsa29I | ATCGAT | 2 cut(s) | 459, 1287 |
| BsaBI | GATNNNNATC | 1 cut(s) | 354 |
| BsaJI | CCNNGG | 3 cut(s) | 307, 529, 998 |
| BsaWI | WCCGGW | 2 cut(s) | 419, 494 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 57, 87, 230, 260, 317, 347 |
| Bse3DI | GCAATG | 1 cut(s) | 163 |
| Bse8I | GATNNNNATC | 1 cut(s) | 354 |
| BseAI | TCCGGA | 1 cut(s) | 419 |
| BseCI | ATCGAT | 2 cut(s) | 459, 1287 |
| BseDI | CCNNGG | 3 cut(s) | 307, 529, 998 |
| BseGI | GGATG | 2 cut(s) | 565, 716 |
| BseJI | GATNNNNATC | 1 cut(s) | 354 |
| BseMI | GCAATG | 1 cut(s) | 163 |
| BseMII | CTCAG | 4 cut(s) | 35, 494, 558, 1286 |
| BseRI | GAGGAG | 4 cut(s) | 62, 125, 164, 209 |
| BseXI | GCAGC | 4 cut(s) | 523, 677, 688, 1232 |
| Bsh1236I | CGCG | 4 cut(s) | 38, 40, 262, 304 |
| Bsh1285I | CGRYCG | 2 cut(s) | 365, 577 |
| BshNI | GGYRCC | 1 cut(s) | 311 |
| BshVI | ATCGAT | 2 cut(s) | 459, 1287 |
| BsiEI | CGRYCG | 2 cut(s) | 365, 577 |
| BsiHKAI | GWGCWC | 2 cut(s) | 286, 573 |
| BsiSI | CCGG | 2 cut(s) | 420, 495 |
| BsmAI | GTCTC | 1 cut(s) | 542 |
| BsmBI | CGTCTC | 1 cut(s) | 542 |
| Bsp1286I | GDGCHC | 2 cut(s) | 286, 573 |
| Bsp13I | TCCGGA | 1 cut(s) | 419 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 44 |
| Bsp19I | CCATGG | 2 cut(s) | 529, 998 |
| BspACI | CCGC | 7 cut(s) | 40, 49, 508, 534, 668, 995, 1196 |
| BspCNI | CTCAG | 4 cut(s) | 36, 493, 559, 1287 |
| BspDI | ATCGAT | 2 cut(s) | 459, 1287 |
| BspEI | TCCGGA | 1 cut(s) | 419 |
| BspFNI | CGCG | 4 cut(s) | 38, 40, 262, 304 |
| BspLI | GGNNCC | 1 cut(s) | 313 |
| BspPI | GGATC | 3 cut(s) | 344, 627, 1159 |
| BspQI | GCTCTTC | 1 cut(s) | 382 |
| BspT107I | GGYRCC | 1 cut(s) | 311 |
| BsrDI | GCAATG | 1 cut(s) | 163 |
| BssECI | CCNNGG | 3 cut(s) | 307, 529, 998 |
| BssT1I | CCWWGG | 3 cut(s) | 307, 529, 998 |
| Bst4CI | ACNGT | 5 cut(s) | 197, 409, 736, 772, 988 |
| Bst6I | CTCTTC | 5 cut(s) | 103, 143, 213, 382, 1261 |
| BstDEI | CTNAG | 6 cut(s) | 44, 480, 567, 1216, 1224, 1295 |
| BstDSI | CCRYGG | 2 cut(s) | 529, 998 |
| BstF5I | GGATG | 2 cut(s) | 565, 716 |
| BstFNI | CGCG | 4 cut(s) | 38, 40, 262, 304 |
| BstHHI | GCGC | 3 cut(s) | 40, 264, 306 |
| BstMAI | GTCTC | 1 cut(s) | 542 |
| BstMCI | CGRYCG | 2 cut(s) | 365, 577 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 438, 1088, 1097 |
| BstUI | CGCG | 4 cut(s) | 38, 40, 262, 304 |
| BstV1I | GCAGC | 4 cut(s) | 523, 677, 688, 1232 |
| BstV2I | GAAGAC | 2 cut(s) | 531, 549 |
| BstX2I | RGATCY | 1 cut(s) | 619 |
| BstYI | RGATCY | 1 cut(s) | 619 |
| Bsu15I | ATCGAT | 2 cut(s) | 459, 1287 |
| BsuTUI | ATCGAT | 2 cut(s) | 459, 1287 |
| BtgI | CCRYGG | 2 cut(s) | 529, 998 |
| BtgZI | GCGATG | 2 cut(s) | 341, 552 |
| BtrI | CACGTC | 1 cut(s) | 281 |
| BtsCI | GGATG | 2 cut(s) | 565, 716 |
| BtsI | GCAGTG | 1 cut(s) | 885 |
| BtsIMutI | CAGTG | 4 cut(s) | 202, 405, 885, 984 |
| CfoI | GCGC | 3 cut(s) | 40, 264, 306 |
| ClaI | ATCGAT | 2 cut(s) | 459, 1287 |
| CseI | GACGC | 2 cut(s) | 268, 671 |
| Csp6I | GTAC | 4 cut(s) | 57, 312, 916, 940 |
| CviAII | CATG | 3 cut(s) | 530, 999, 1192 |
| CviQI | GTAC | 4 cut(s) | 57, 312, 916, 940 |
| DdeI | CTNAG | 6 cut(s) | 44, 480, 567, 1216, 1224, 1295 |
| DraI | TTTAAA | 1 cut(s) | 637 |
| Eam1104I | CTCTTC | 5 cut(s) | 103, 143, 213, 382, 1261 |
| EarI | CTCTTC | 5 cut(s) | 103, 143, 213, 382, 1261 |
| Ecl136II | GAGCTC | 1 cut(s) | 571 |
| Eco130I | CCWWGG | 3 cut(s) | 307, 529, 998 |
| Eco24I | GRGCYC | 1 cut(s) | 573 |
| Eco32I | GATATC | 1 cut(s) | 1026 |
| Eco53kI | GAGCTC | 1 cut(s) | 571 |
| Eco57I | CTGAAG | 2 cut(s) | 278, 644 |
| EcoICRI | GAGCTC | 1 cut(s) | 571 |
| EcoRV | GATATC | 1 cut(s) | 1026 |
| EcoT14I | CCWWGG | 3 cut(s) | 307, 529, 998 |
| EcoT38I | GRGCYC | 1 cut(s) | 573 |
| ErhI | CCWWGG | 3 cut(s) | 307, 529, 998 |
| Esp3I | CGTCTC | 1 cut(s) | 542 |
| FaeI | CATG | 3 cut(s) | 533, 1002, 1195 |
| FaiI | YATR | 9 cut(s) | 27, 252, 531, 708, 761, 913, 992, 1000, 1193 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1141, 1173 |
| FatI | CATG | 3 cut(s) | 529, 998, 1191 |
| FblI | GTMKAC | 1 cut(s) | 192 |
| FokI | GGATG | 2 cut(s) | 572, 723 |
| FriOI | GRGCYC | 1 cut(s) | 573 |
| FspBI | CTAG | 2 cut(s) | 650, 722 |
| GlaI | GCGC | 3 cut(s) | 39, 263, 305 |
| HapII | CCGG | 2 cut(s) | 420, 495 |
| HgaI | GACGC | 2 cut(s) | 268, 671 |
| HhaI | GCGC | 3 cut(s) | 40, 264, 306 |
| Hin1II | CATG | 3 cut(s) | 533, 1002, 1195 |
| Hin6I | GCGC | 3 cut(s) | 38, 262, 304 |
| HinP1I | GCGC | 3 cut(s) | 38, 262, 304 |
| HincII | GTYRAC | 1 cut(s) | 193 |
| HindII | GTYRAC | 1 cut(s) | 193 |
| HindIII | AAGCTT | 1 cut(s) | 1150 |
| HinfI | GANTC | 4 cut(s) | 228, 563, 718, 1109 |
| HpaII | CCGG | 2 cut(s) | 420, 495 |
| HphI | GGTGA | 4 cut(s) | 266, 381, 697, 727 |
| Hpy166II | GTNNAC | 5 cut(s) | 193, 389, 729, 739, 1186 |
| Hpy188I | TCNGA | 4 cut(s) | 483, 568, 624, 923 |
| Hpy188III | TCNNGA | 5 cut(s) | 225, 420, 578, 831, 1113 |
| Hpy8I | GTNNAC | 5 cut(s) | 193, 389, 729, 739, 1186 |
| Hpy99I | CGWCG | 6 cut(s) | 161, 194, 262, 282, 323, 326 |
| HpyAV | CCTTC | 9 cut(s) | 213, 485, 514, 810, 1012, 1110, 1119, 1132, 1136 |
| HpyCH4III | ACNGT | 5 cut(s) | 197, 409, 736, 772, 988 |
| HpyCH4IV | ACGT | 2 cut(s) | 280, 655 |
| HpyCH4V | TGCA | 1 cut(s) | 1238 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 438, 1088, 1097 |
| HpyF3I | CTNAG | 6 cut(s) | 44, 480, 567, 1216, 1224, 1295 |
| HpySE526I | ACGT | 2 cut(s) | 280, 655 |
| Hsp92II | CATG | 3 cut(s) | 533, 1002, 1195 |
| HspAI | GCGC | 3 cut(s) | 38, 262, 304 |
| Kpn2I | TCCGGA | 1 cut(s) | 419 |
| KpnI | GGTACC | 1 cut(s) | 315 |
| LguI | GCTCTTC | 1 cut(s) | 382 |
| LmnI | GCTCC | 5 cut(s) | 75, 251, 289, 497, 646 |
| LpnPI | CCDG | 6 cut(s) | 423, 433, 508, 840, 937, 1014 |
| Lsp1109I | GCAGC | 4 cut(s) | 523, 677, 688, 1232 |
| LweI | GCATC | 4 cut(s) | 877, 966, 1078, 1225 |
| MaeI | CTAG | 2 cut(s) | 650, 722 |
| MaeII | ACGT | 2 cut(s) | 280, 655 |
| MaeIII | GTNAC | 4 cut(s) | 197, 659, 766, 850 |
| MflI | RGATCY | 1 cut(s) | 619 |
| MhlI | GDGCHC | 2 cut(s) | 286, 573 |
| MluCI | AATT | 1 cut(s) | 554 |
| MlyI | GAGTC | 1 cut(s) | 222 |
| MmeI | TCCRAC | 1 cut(s) | 1158 |
| MroI | TCCGGA | 1 cut(s) | 419 |
| MseI | TTAA | 6 cut(s) | 179, 237, 636, 843, 866, 968 |
| MslI | CAYNNNNRTG | 3 cut(s) | 279, 989, 1245 |
| MspA1I | CMGCKG | 2 cut(s) | 668, 701 |
| MspI | CCGG | 2 cut(s) | 420, 495 |
| MvnI | CGCG | 4 cut(s) | 38, 40, 262, 304 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 438, 1088, 1097 |
| NcoI | CCATGG | 2 cut(s) | 529, 998 |
| NlaIII | CATG | 3 cut(s) | 533, 1002, 1195 |
| NlaIV | GGNNCC | 1 cut(s) | 313 |
| NmuCI | GTSAC | 2 cut(s) | 197, 659 |
| OliI | CACNNNNGTG | 1 cut(s) | 279 |
| PciSI | GCTCTTC | 1 cut(s) | 382 |
| PfeI | GAWTC | 3 cut(s) | 563, 718, 1109 |
| Ple19I | CGATCG | 2 cut(s) | 365, 577 |
| PleI | GAGTC | 1 cut(s) | 222 |
| PpsI | GAGTC | 1 cut(s) | 222 |
| Psp124BI | GAGCTC | 1 cut(s) | 573 |
| PspN4I | GGNNCC | 1 cut(s) | 313 |
| PsuI | RGATCY | 1 cut(s) | 619 |
| PvuI | CGATCG | 2 cut(s) | 365, 577 |
| PvuII | CAGCTG | 1 cut(s) | 701 |
| RsaI | GTAC | 4 cut(s) | 58, 313, 917, 941 |
| RsaNI | GTAC | 4 cut(s) | 57, 312, 916, 940 |
| RseI | CAYNNNNRTG | 3 cut(s) | 279, 989, 1245 |
| SacI | GAGCTC | 1 cut(s) | 573 |
| SalI | GTCGAC | 1 cut(s) | 191 |
| SapI | GCTCTTC | 1 cut(s) | 382 |
| SaqAI | TTAA | 6 cut(s) | 179, 237, 636, 843, 866, 968 |
| ScaI | AGTACT | 1 cut(s) | 941 |
| SchI | GAGTC | 1 cut(s) | 222 |
| SduI | GDGCHC | 2 cut(s) | 286, 573 |
| SfaNI | GCATC | 4 cut(s) | 877, 966, 1078, 1225 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 279, 989, 1245 |
| SmlI | CTYRAG | 1 cut(s) | 515 |
| SmoI | CTYRAG | 1 cut(s) | 515 |
| Sse9I | AATT | 1 cut(s) | 554 |
| SsiI | CCGC | 7 cut(s) | 40, 49, 508, 534, 668, 995, 1196 |
| SspMI | CTAG | 2 cut(s) | 650, 722 |
| SstI | GAGCTC | 1 cut(s) | 573 |
| StyI | CCWWGG | 3 cut(s) | 307, 529, 998 |
| TaaI | ACNGT | 5 cut(s) | 197, 409, 736, 772, 988 |
| TaiI | ACGT | 2 cut(s) | 283, 658 |
| TaqI | TCGA | 8 cut(s) | 159, 192, 226, 318, 459, 573, 1112, 1287 |
| TaqII | GACCGA | 1 cut(s) | 20 |
| TasI | AATT | 1 cut(s) | 554 |
| TatI | WGTACW | 1 cut(s) | 939 |
| TauI | GCSGC | 7 cut(s) | 43, 51, 511, 537, 671, 997, 1199 |
| TfiI | GAWTC | 3 cut(s) | 563, 718, 1109 |
| Tru1I | TTAA | 6 cut(s) | 179, 237, 636, 843, 866, 968 |
| Tru9I | TTAA | 6 cut(s) | 179, 237, 636, 843, 866, 968 |
| TscAI | CASTG | 4 cut(s) | 202, 412, 885, 991 |
| TseFI | GTSAC | 2 cut(s) | 197, 659 |
| TseI | GCWGC | 4 cut(s) | 511, 665, 701, 1220 |
| Tsp45I | GTSAC | 2 cut(s) | 197, 659 |
| TspDTI | ATGAA | 4 cut(s) | 106, 555, 576, 1180 |
| TspGWI | ACGGA | 5 cut(s) | 44, 65, 276, 480, 566 |
| TspRI | CASTG | 4 cut(s) | 202, 412, 885, 991 |
| XmiI | GTMKAC | 1 cut(s) | 192 |
| XspI | CTAG | 2 cut(s) | 650, 722 |
| ZrmI | AGTACT | 1 cut(s) | 941 |