RLG00000024311

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0011460
Physical Location & Seq
Reverse (-)
34361417 .. 34362778
1362 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024311

Sequence Viewer

Length: 1362 bp
ATGAGCGACCACCACCCGCGGCTCCACCACCTCCGGAGCACACCGCAGCTCCTCCGGCAAGCCTCGGCCTCCTTCTTCTCCAACCTCTTCACCTTCCTCTTCCTCTCCCTCCTCATCTTCTCCTTCCGCACAGTCGTCGAGAACGGGACCCACCTCCTCACCGCCTTCATCGACCGCGACCCTTCCCTCAAGTCCCTCCTCTCCCGCCTCGACATCGCCGCCAACCCCACCACCTCCCGATCCGCCCCCTCTCCGGTCACCCTCCGCCGCCGCCACCGCCCCTTCCTCCAGCTCACCCGCGTCGGAACCCTCGACGAGGACTTCTTCTCCGGCGAAGACGACGACGACGACTCCCGCGCCCTCTTCGGCTCCACCCGCAAAGCCCCAATCTTCATCTTCTCTCACTTCACCTCCAAATTAGGGTTTAATGGGACTAGGGTTTCCGACATGGCCCGCTCCGGCCTCTCCTTCAAAGCCGACCAATTGACCATCTCCAATGAGAAAGCGACACACAGAGACGGCGGCGATAATGAGGAAGAAGATGAAGAAGAAGAACAAGGCAATTCGGAAAATTCAGAAATGGATCGGATTGTGGATTTGCAATTCTTCATCAAGGGATTGGAGCTGGGTCAACGCGACGTGGCGGCCTTGTTCTTCCTTGTGAGTTTCTTATCTGCAGCATATGGCTGGGTCATTCTAGGGTTTCTTGTTACGTATTCTTGGGTTCTCGGCATTGTGTTCACCACAGTTGTTAATGATCTGATAGGGAGGTTTAATTCGTTCATTGGTTTAGTTTGGGATGGGTCTAGATTGGGTGTCAAGAGATTGTCTGGCTTCATTTTGATGAGGTGGGCTGTGAGAGACGCACTCACTCAGCTTCTAGGATTGTGGTATTTCGGTGAGATTGAGGACCAGTACTCTTTTTTTAAGCTCTTCATTAGGTTAAAGTTGATGCCTTTCTCTGTTATGCCTCCCTGGATTCGAGGTTTCGAGAAGGAGATTTCCGGGTTTCTGTTGATGTGGATATTTGTGGATACGATTGTGGCGTTTGTGTTTGCCGTGGATGCTTGGATTGCGATAGTCGATTCTAGGAAGAGTGGGAAGGAGATTGTTAAGGAGGGGTTGCAGTTGGTAGGATCCATGTTCAGCCAAGCTCTGCAAATAAAGTGCTTGGAACTTATATTTTGTGGGACGTCTGTAAAATGGGGTCTGACTCGAGTTTTTGGAAGATCGTTTGCCAAGGTCTTTCAGTCGACCATGGAAGTCTACTTTTTGGTGGCTTGGTTGATATTTTACTTTGCAGCAAGGGCGAGGTGTAGGCATGCTAGCTCACAGGGGGATAGAATTGGAGCACTTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

454

Amino Acids

51.51

Weight (kDa)

7.17

Isoelectric Point (pI)

37.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7813 PF25105 10 - 450 8.3e-194 Family of unknown function (DUF7813)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011460)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37035
fragaria_vesca FvH4_6g16100
malus_domestica MD04G1095900.v1.1 MD12G1115900.v1.1
prunus_persica Prupe.6G235000_v2.0.a1
pyrus_communis pycom04g09080 pycom12g11540 pycom15g07040
rosa_chinensis RchiOBHm_Chr3g0469941
rosa_laevigata RLG00000024311
rosa_multiflora Rmu_sc0008347.1_g000001
rosa_roxburghii Rroxscaffold_5G00354980 Rroxscaffold_6G00411350
rosa_rugosa Rorug03G0105600 Rorug05G0154500
rosa_samantha Rh3AG154500 Rh3BG178600 Rh3CG169200 Rh3DG196500
rosa_wichuraiana Rw3G014560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1196
AccBSI CCGCTC 1 cut(s) 456
AccI GTMKAC 2 cut(s) 1253, 1266
AccII CGCG 5 cut(s) 19, 177, 300, 357, 636
AccIII TCCGGA 1 cut(s) 33
AclWI GGATC 4 cut(s) 234, 591, 1131, 1144
AcsI RAATTY 1 cut(s) 571
AcyI GRCGYC 1 cut(s) 1193
AfaI GTAC 1 cut(s) 917
AfiI CCNNNNNNNGG 3 cut(s) 253, 316, 420
AgsI TTSAA 1 cut(s) 472
AjiI CACGTC 1 cut(s) 640
AjnI CCWGG 1 cut(s) 974
AluBI AGCT 7 cut(s) 49, 292, 625, 877, 931, 1154, 1329
AluI AGCT 7 cut(s) 49, 292, 625, 877, 931, 1154, 1329
Alw21I GWGCWC 2 cut(s) 41, 1354
Alw26I GTCTC 2 cut(s) 510, 855
AlwI GGATC 4 cut(s) 234, 591, 1131, 1144
Ama87I CYCGRG 1 cut(s) 1215
Aor13HI TCCGGA 1 cut(s) 33
AoxI GGCC 4 cut(s) 66, 450, 460, 645
ApeKI GCWGC 3 cut(s) 46, 677, 1301
ApoI RAATTY 1 cut(s) 571
AspLEI GCGC 1 cut(s) 359
AspS9I GGNCC 3 cut(s) 147, 451, 910
AsuC2I CCSGG 1 cut(s) 1006
AsuHPI GGTGA 7 cut(s) 82, 151, 250, 286, 400, 733, 911
AsuNHI GCTAGC 1 cut(s) 1325
AvaI CYCGRG 1 cut(s) 1215
AvaII GGWCC 2 cut(s) 147, 910
BaeI ACNNNNGTAYC 2 cut(s) 1026, 1059
BamHI GGATCC 1 cut(s) 1136
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 2 cut(s) 41, 1354
BbvI GCAGC 3 cut(s) 58, 689, 1313
BccI CCATC 2 cut(s) 497, 794
BceAI ACGGC 2 cut(s) 535, 1043
BcgI CGANNNNNNTGC 2 cut(s) 118, 152
BciT130I CCWGG 1 cut(s) 976
BciVI GTATCC 1 cut(s) 1027
BcnI CCSGG 1 cut(s) 1006
BcoDI GTCTC 2 cut(s) 510, 855
BfaI CTAG 6 cut(s) 435, 698, 807, 881, 1089, 1326
BfmI CTRYAG 1 cut(s) 675
BfuI GTATCC 1 cut(s) 1027
BisI GCNGC 9 cut(s) 20, 47, 219, 268, 271, 523, 645, 678, 1302
BlsI GCNGC 9 cut(s) 21, 48, 220, 269, 272, 524, 646, 679, 1303
BmcAI AGTACT 1 cut(s) 917
Bme1390I CCNGG 2 cut(s) 976, 1006
Bme18I GGWCC 2 cut(s) 147, 910
BmeT110I CYCGRG 1 cut(s) 1215
BmgBI CACGTC 1 cut(s) 640
BmgT120I GGNCC 3 cut(s) 147, 451, 910
BmiI GGNNCC 6 cut(s) 23, 148, 149, 307, 370, 1138
BmrFI CCNGG 2 cut(s) 976, 1006
BmsI GCATC 2 cut(s) 942, 1054
BmtI GCTAGC 1 cut(s) 1329
BpiI GAAGAC 1 cut(s) 342
BplI GAGNNNNNCTC 2 cut(s) 852, 884
BpmI CTGGAG 1 cut(s) 272
BpuEI CTTGAG 1 cut(s) 173
BpuMI CCSGG 1 cut(s) 1006
BsaAI YACGTR 1 cut(s) 714
BsaHI GRCGYC 1 cut(s) 1193
BsaJI CCNNGG 6 cut(s) 17, 63, 974, 1059, 1239, 1257
BsaWI WCCGGW 2 cut(s) 33, 253
BsaXI ACNNNNNCTCC 8 cut(s) 33, 63, 311, 335, 341, 365, 395, 425
Bsc4I CCNNNNNNNGG 3 cut(s) 253, 316, 420
Bse1I ACTGG 1 cut(s) 913
BseAI TCCGGA 1 cut(s) 33
BseBI CCWGG 1 cut(s) 976
BseDI CCNNGG 6 cut(s) 17, 63, 974, 1059, 1239, 1257
BseGI GGATG 2 cut(s) 805, 1069
BseLI CCNNNNNNNGG 3 cut(s) 253, 316, 420
BseMII CTCAG 1 cut(s) 887
BseNI ACTGG 1 cut(s) 913
BseRI GAGGAG 4 cut(s) 41, 101, 146, 188
BseXI GCAGC 3 cut(s) 58, 689, 1313
BseYI CCCAGC 2 cut(s) 625, 687
Bsh1236I CGCG 5 cut(s) 19, 177, 300, 357, 636
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 4 cut(s) 68, 452, 462, 647
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 2 cut(s) 41, 1354
BsiHKCI CYCGRG 1 cut(s) 1215
BsiSI CCGG 6 cut(s) 34, 55, 254, 330, 459, 1005
BslFI GGGAC 4 cut(s) 160, 178, 445, 1204
BslI CCNNNNNNNGG 3 cut(s) 253, 316, 420
BsmAI GTCTC 2 cut(s) 510, 855
BsmBI CGTCTC 2 cut(s) 510, 855
BsmFI GGGAC 4 cut(s) 160, 178, 445, 1204
BsnI GGCC 4 cut(s) 68, 452, 462, 647
BsoBI CYCGRG 1 cut(s) 1215
Bsp1286I GDGCHC 2 cut(s) 41, 1354
Bsp13I TCCGGA 1 cut(s) 33
Bsp143I GATC 5 cut(s) 239, 583, 757, 1136, 1229
Bsp19I CCATGG 1 cut(s) 1257
BspANI GGCC 4 cut(s) 68, 452, 462, 647
BspCNI CTCAG 1 cut(s) 886
BspEI TCCGGA 1 cut(s) 33
BspFNI CGCG 5 cut(s) 19, 177, 300, 357, 636
BspLI GGNNCC 6 cut(s) 23, 148, 149, 307, 370, 1138
BspMAI CTGCAG 1 cut(s) 679
BspOI GCTAGC 1 cut(s) 1329
BspPI GGATC 4 cut(s) 234, 591, 1131, 1144
BspQI GCTCTTC 1 cut(s) 938
BsrBI CCGCTC 1 cut(s) 456
BsrI ACTGG 1 cut(s) 913
BssECI CCNNGG 6 cut(s) 17, 63, 974, 1059, 1239, 1257
BssMI GATC 5 cut(s) 239, 583, 757, 1136, 1229
BssNI GRCGYC 1 cut(s) 1193
BssT1I CCWWGG 2 cut(s) 1239, 1257
Bst2UI CCWGG 1 cut(s) 976
Bst4CI ACNGT 2 cut(s) 133, 748
Bst6I CTCTTC 5 cut(s) 92, 104, 368, 938, 1088
BstACI GRCGYC 1 cut(s) 1193
BstBAI YACGTR 1 cut(s) 714
BstC8I GCNNGC 4 cut(s) 60, 454, 1323, 1327
BstDEI CTNAG 1 cut(s) 873
BstDSI CCRYGG 3 cut(s) 17, 1059, 1257
BstEII GGTNACC 1 cut(s) 256
BstENI CCTNNNNNAGG 1 cut(s) 314
BstF5I GGATG 2 cut(s) 805, 1069
BstFNI CGCG 5 cut(s) 19, 177, 300, 357, 636
BstHHI GCGC 1 cut(s) 359
BstKTI GATC 5 cut(s) 242, 586, 760, 1139, 1232
BstMAI GTCTC 2 cut(s) 510, 855
BstMBI GATC 5 cut(s) 239, 583, 757, 1136, 1229
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 6 cut(s) 55, 276, 375, 1064, 1073, 1307
BstNI CCWGG 1 cut(s) 976
BstNSI RCATGY 1 cut(s) 1325
BstPI GGTNACC 1 cut(s) 256
BstSCI CCNGG 2 cut(s) 974, 1004
BstSFI CTRYAG 1 cut(s) 675
BstSNI TACGTA 1 cut(s) 714
BstUI CGCG 5 cut(s) 19, 177, 300, 357, 636
BstV1I GCAGC 3 cut(s) 58, 689, 1313
BstV2I GAAGAC 1 cut(s) 342
BstX2I RGATCY 1 cut(s) 1136
BstYI RGATCY 1 cut(s) 1136
BsuI GTATCC 1 cut(s) 1027
BsuRI GGCC 4 cut(s) 68, 452, 462, 647
BtgI CCRYGG 3 cut(s) 17, 1059, 1257
BtgZI GCGATG 1 cut(s) 199
BtrI CACGTC 1 cut(s) 640
BtsCI GGATG 2 cut(s) 805, 1069
Cac8I GCNNGC 4 cut(s) 60, 454, 1323, 1327
CfoI GCGC 1 cut(s) 359
Cfr13I GGNCC 3 cut(s) 147, 451, 910
Cfr42I CCGCGG 1 cut(s) 20
CseI GACGC 2 cut(s) 289, 872
Csp6I GTAC 1 cut(s) 916
CviAII CATG 4 cut(s) 448, 1141, 1258, 1322
CviQI GTAC 1 cut(s) 916
DdeI CTNAG 1 cut(s) 873
DpnI GATC 5 cut(s) 241, 585, 759, 1138, 1231
DpnII GATC 5 cut(s) 239, 583, 757, 1136, 1229
Eam1104I CTCTTC 5 cut(s) 92, 104, 368, 938, 1088
EarI CTCTTC 5 cut(s) 92, 104, 368, 938, 1088
EciI GGCGGA 2 cut(s) 232, 254
Eco105I TACGTA 1 cut(s) 714
Eco130I CCWWGG 2 cut(s) 1239, 1257
Eco47I GGWCC 2 cut(s) 147, 910
Eco88I CYCGRG 1 cut(s) 1215
Eco91I GGTNACC 1 cut(s) 256
EcoNI CCTNNNNNAGG 1 cut(s) 314
EcoO109I RGGNCCY 1 cut(s) 147
EcoO65I GGTNACC 1 cut(s) 256
EcoRII CCWGG 1 cut(s) 974
EcoT14I CCWWGG 2 cut(s) 1239, 1257
ErhI CCWWGG 2 cut(s) 1239, 1257
Esp3I CGTCTC 2 cut(s) 510, 855
FaeI CATG 4 cut(s) 451, 1144, 1261, 1325
FaiI YATR 8 cut(s) 449, 682, 684, 968, 1142, 1181, 1259, 1323
FaqI GGGAC 4 cut(s) 160, 178, 445, 1204
FatI CATG 4 cut(s) 447, 1140, 1257, 1321
FauI CCCGC 6 cut(s) 24, 212, 305, 362, 383, 461
FauNDI CATATG 1 cut(s) 682
FblI GTMKAC 2 cut(s) 1253, 1266
Fnu4HI GCNGC 9 cut(s) 20, 47, 219, 268, 271, 523, 645, 678, 1302
FokI GGATG 2 cut(s) 812, 1076
Fsp4HI GCNGC 9 cut(s) 20, 47, 219, 268, 271, 523, 645, 678, 1302
FspBI CTAG 6 cut(s) 435, 698, 807, 881, 1089, 1326
GlaI GCGC 1 cut(s) 358
GluI GCNGC 9 cut(s) 20, 47, 219, 268, 271, 523, 645, 678, 1302
GsaI CCCAGC 2 cut(s) 629, 691
GsuI CTGGAG 1 cut(s) 272
HaeIII GGCC 4 cut(s) 68, 452, 462, 647
HapII CCGG 6 cut(s) 34, 55, 254, 330, 459, 1005
HgaI GACGC 2 cut(s) 289, 872
HhaI GCGC 1 cut(s) 359
Hin1I GRCGYC 1 cut(s) 1193
Hin1II CATG 4 cut(s) 451, 1144, 1261, 1325
Hin6I GCGC 1 cut(s) 357
HinP1I GCGC 1 cut(s) 357
HincII GTYRAC 2 cut(s) 632, 1254
HindII GTYRAC 2 cut(s) 632, 1254
HinfI GANTC 4 cut(s) 350, 979, 1085, 1213
HpaII CCGG 6 cut(s) 34, 55, 254, 330, 459, 1005
HphI GGTGA 7 cut(s) 82, 151, 250, 286, 400, 733, 911
Hpy166II GTNNAC 4 cut(s) 632, 741, 1254, 1267
Hpy188I TCNGA 7 cut(s) 305, 445, 568, 577, 588, 762, 1212
Hpy188III TCNNGA 6 cut(s) 34, 139, 237, 807, 820, 991
Hpy8I GTNNAC 4 cut(s) 632, 741, 1254, 1267
Hpy99I CGWCG 7 cut(s) 140, 305, 317, 344, 347, 350, 641
HpyAV CCTTC 9 cut(s) 82, 103, 133, 175, 192, 292, 478, 988, 1096
HpyCH4III ACNGT 2 cut(s) 133, 748
HpyCH4IV ACGT 3 cut(s) 639, 713, 1193
HpyCH4V TGCA 5 cut(s) 601, 677, 1126, 1159, 1301
HpyF10VI GCNNNNNNNGC 6 cut(s) 55, 276, 375, 1064, 1073, 1307
HpyF3I CTNAG 1 cut(s) 873
HpySE526I ACGT 3 cut(s) 639, 713, 1193
Hsp92I GRCGYC 1 cut(s) 1193
Hsp92II CATG 4 cut(s) 451, 1144, 1261, 1325
HspAI GCGC 1 cut(s) 357
KflI GGGWCCC 1 cut(s) 147
Kpn2I TCCGGA 1 cut(s) 33
KspI CCGCGG 1 cut(s) 20
Kzo9I GATC 5 cut(s) 239, 583, 757, 1136, 1229
LguI GCTCTTC 1 cut(s) 938
LmnI GCTCC 7 cut(s) 27, 36, 54, 374, 461, 622, 1349
Lsp1109I GCAGC 3 cut(s) 58, 689, 1313
LweI GCATC 2 cut(s) 942, 1054
MaeI CTAG 6 cut(s) 435, 698, 807, 881, 1089, 1326
MaeII ACGT 3 cut(s) 639, 713, 1193
MaeIII GTNAC 2 cut(s) 256, 709
MalI GATC 5 cut(s) 241, 585, 759, 1138, 1231
MbiI CCGCTC 1 cut(s) 456
MboI GATC 5 cut(s) 239, 583, 757, 1136, 1229
MfeI CAATTG 1 cut(s) 482
MflI RGATCY 1 cut(s) 1136
MhlI GDGCHC 2 cut(s) 41, 1354
MluCI AATT 7 cut(s) 416, 482, 562, 571, 602, 775, 1344
MlyI GAGTC 2 cut(s) 344, 1207
MmeI TCCRAC 3 cut(s) 105, 283, 468
MroI TCCGGA 1 cut(s) 33
MseI TTAA 6 cut(s) 426, 753, 774, 927, 944, 1113
MslI CAYNNNNRTG 1 cut(s) 842
MspA1I CMGCKG 1 cut(s) 19
MspI CCGG 6 cut(s) 34, 55, 254, 330, 459, 1005
MspR9I CCNGG 2 cut(s) 976, 1006
MunI CAATTG 1 cut(s) 482
MvaI CCWGG 1 cut(s) 976
MvnI CGCG 5 cut(s) 19, 177, 300, 357, 636
MwoI GCNNNNNNNGC 6 cut(s) 55, 276, 375, 1064, 1073, 1307
NciI CCSGG 1 cut(s) 1006
NcoI CCATGG 1 cut(s) 1257
NdeI CATATG 1 cut(s) 682
NdeII GATC 5 cut(s) 239, 583, 757, 1136, 1229
NheI GCTAGC 1 cut(s) 1325
NlaIII CATG 4 cut(s) 451, 1144, 1261, 1325
NlaIV GGNNCC 6 cut(s) 23, 148, 149, 307, 370, 1138
NmeAIII GCCGAG 2 cut(s) 44, 708
NmuCI GTSAC 1 cut(s) 256
NspI RCATGY 1 cut(s) 1325
PaeI GCATGC 1 cut(s) 1325
PaeR7I CTCGAG 1 cut(s) 1215
PciSI GCTCTTC 1 cut(s) 938
PcsI WCGNNNNNNNCGW 3 cut(s) 309, 345, 1043
PfeI GAWTC 2 cut(s) 979, 1085
PkrI GCNGC 9 cut(s) 21, 48, 220, 269, 272, 524, 646, 679, 1303
PleI GAGTC 2 cut(s) 344, 1207
PpsI GAGTC 2 cut(s) 344, 1207
Ppu21I YACGTR 1 cut(s) 714
PpuMI RGGWCCY 1 cut(s) 147
Psp5II RGGWCCY 1 cut(s) 147
Psp6I CCWGG 1 cut(s) 974
PspEI GGTNACC 1 cut(s) 256
PspFI CCCAGC 2 cut(s) 625, 687
PspGI CCWGG 1 cut(s) 974
PspN4I GGNNCC 6 cut(s) 23, 148, 149, 307, 370, 1138
PspPI GGNCC 3 cut(s) 147, 451, 910
PspPPI RGGWCCY 1 cut(s) 147
PspXI VCTCGAGB 1 cut(s) 1215
PstI CTGCAG 1 cut(s) 679
PsuI RGATCY 1 cut(s) 1136
RsaI GTAC 1 cut(s) 917
RsaNI GTAC 1 cut(s) 916
RseI CAYNNNNRTG 1 cut(s) 842
SacII CCGCGG 1 cut(s) 20
SalI GTCGAC 1 cut(s) 1252
SapI GCTCTTC 1 cut(s) 938
SaqAI TTAA 6 cut(s) 426, 753, 774, 927, 944, 1113
SatI GCNGC 9 cut(s) 20, 47, 219, 268, 271, 523, 645, 678, 1302
Sau3AI GATC 5 cut(s) 239, 583, 757, 1136, 1229
Sau96I GGNCC 3 cut(s) 147, 451, 910
ScaI AGTACT 1 cut(s) 917
SchI GAGTC 2 cut(s) 344, 1207
ScrFI CCNGG 2 cut(s) 976, 1006
SduI GDGCHC 2 cut(s) 41, 1354
SfaNI GCATC 2 cut(s) 942, 1054
SfcI CTRYAG 1 cut(s) 675
Sfr274I CTCGAG 1 cut(s) 1215
Sfr303I CCGCGG 1 cut(s) 20
SgrBI CCGCGG 1 cut(s) 20
SinI GGWCC 2 cut(s) 147, 910
SlaI CTCGAG 1 cut(s) 1215
SmiMI CAYNNNNRTG 1 cut(s) 842
SmlI CTYRAG 2 cut(s) 188, 1215
SmoI CTYRAG 2 cut(s) 188, 1215
SnaBI TACGTA 1 cut(s) 714
SphI GCATGC 1 cut(s) 1325
Sse9I AATT 7 cut(s) 416, 482, 562, 571, 602, 775, 1344
SspMI CTAG 6 cut(s) 435, 698, 807, 881, 1089, 1326
StyD4I CCNGG 2 cut(s) 974, 1004
StyI CCWWGG 2 cut(s) 1239, 1257
TaaI ACNGT 2 cut(s) 133, 748
TaiI ACGT 3 cut(s) 642, 716, 1196
TaqI TCGA 9 cut(s) 138, 171, 210, 312, 982, 990, 1083, 1216, 1253
TasI AATT 7 cut(s) 416, 482, 562, 571, 602, 775, 1344
TatI WGTACW 1 cut(s) 915
TauI GCSGC 6 cut(s) 22, 221, 270, 273, 525, 647
TfiI GAWTC 2 cut(s) 979, 1085
Tru1I TTAA 6 cut(s) 426, 753, 774, 927, 944, 1113
Tru9I TTAA 6 cut(s) 426, 753, 774, 927, 944, 1113
TseFI GTSAC 1 cut(s) 256
TseI GCWGC 3 cut(s) 46, 677, 1301
Tsp45I GTSAC 1 cut(s) 256
TspDTI ATGAA 8 cut(s) 157, 382, 558, 598, 772, 826, 925, 1346
VpaK11BI GGWCC 2 cut(s) 147, 910
XagI CCTNNNNNAGG 1 cut(s) 314
XapI RAATTY 1 cut(s) 571
XbaI TCTAGA 1 cut(s) 806
XceI RCATGY 1 cut(s) 1325
XhoI CTCGAG 1 cut(s) 1215
XmiI GTMKAC 2 cut(s) 1253, 1266
XspI CTAG 6 cut(s) 435, 698, 807, 881, 1089, 1326
ZraI GACGTC 1 cut(s) 1194
ZrmI AGTACT 1 cut(s) 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.