AT2G38670

pect1 pect1 (phosphorylethanolamine cytidylyltransferase 1)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
16168712 .. 16171918
3207 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G38670.1

Sequence Viewer

Length: 1266 bp
ATGGTTTGGGAGAAAGAGAAGATCGTCGGAAGTTGTATAGTCGGAGGAGCTGCGTTCGCCGTCGGAGCTTCTTTCCTTCATCTTTTCCTTAAAGGTGAGCTTCCGTTAGGATTAGGTTTAGGTTTGTCTTGTCCATGGCGCATTTTGAGAAAACGAAAACCTGTTCGCGTTTACATGGATGGTTGCTTCGATATGATGCACTATGGCCACTGCAACGCTCTTCGTCAAGCTCGTGCTCTCGGTGACCAATTGGTCGTCGGTGTTGTTTCCGACGAAGAAATTATAGCCAACAAAGGACCTCCTGTTACTCCTCTTCATGAAAGAATGACAATGGTGAAAGCTGTGAAGTGGGTGGATGAAGTTATATCTGATGCTCCTTACGCTATTACGGAAGATTTCATGAAGAAATTGTTCGATGAGTATCAGATCGATTACATTATCCATGGTGATGATCCTTGTGTTCTTCCTGATGGTACTGATGCTTATGCACTTGCTAAGAAGGCTGGTCGTTACAAGCAGATTAAGCGCACTGAAGGAGTTTCTAGCACTGATATCGTTGGTCGTATGCTTCTTTGTGTAAGAGAAAGATCCATTAGTGACACTCATAGTCGTTCCTCTCTGCAAAGGCAATTTAGTCATGGGCATAGTAGCCCAAAGTTTGAGGATGGAGCTTCTTCTGCTGGTACTCGTGTCTCGCATTTTCTTCCTACTTCCCGCAGGATTGTTCAGTTCTCCAATGGAAAGGGGCCAGGACCTGATGCACGCATTATCTACATAGATGGTGCTTTTGATCTTTTCCATGCTGGCCATGTTGAGATTCTTAGACGTGCTCGAGAGCTTGGAGACTTTCTTCTTGTTGGTATACATAATGACCAGACTGTCAGTGCTAAACGAGGAGCGCATCGCCCTATTATGAATCTCCATGAAAGGAGCTTAAGCGTTCTGGCGTGCCGCTACGTGGATGAGGTGATAATTGGTGCTCCATGGGAAGTGTCGAGAGATACGATCACGACATTTGACATCTCGTTGGTGGTACATGGGACAGTAGCCGAGAGCGATGATTTTCGAAAGGAGGAAGATAATCCGTATTCTGTACCAATTAGCATGGGCATATTCCAAGTTCTAGATAGCCCTCTTGATATCACAACGTCCACCATAATCAGGAGGATTGTAGCAAACCATGAAGCTTATCAGAAACGTAATGCGAAGAAGGAAGCTAGCGAGAAAAAGTATTACGAGCAGAAGTCGTTTGTGTCCGGAGACTGA

Protein Analysis

421

Amino Acids

46.98

Weight (kDa)

7.27

Isoelectric Point (pI)

39.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTP_transf_like PF01467 58 - 187 1.8e-27 Cytidylyltransferase-like
CTP_transf_like PF01467 258 - 370 4e-19 Cytidylyltransferase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 251, 878
AccI GTMKAC 1 cut(s) 862
AccII CGCG 1 cut(s) 168
AccIII TCCGGA 1 cut(s) 1256
AciI CCGC 2 cut(s) 715, 952
AclWI GGATC 2 cut(s) 446, 582
AcoI YGGCCR 2 cut(s) 205, 805
AcuI CTGAAG 1 cut(s) 552
AfaI GTAC 4 cut(s) 475, 685, 1035, 1095
AfiI CCNNNNNNNGG 2 cut(s) 958, 1161
AflII CTTAAG 1 cut(s) 934
AjiI CACGTC 1 cut(s) 827
AjnI CCWGG 1 cut(s) 748
Alw21I GWGCWC 3 cut(s) 238, 832, 982
Alw26I GTCTC 3 cut(s) 697, 837, 1254
AlwI GGATC 2 cut(s) 446, 582
AlwNI CAGNNNCTG 1 cut(s) 755
Ama87I CYCGRG 1 cut(s) 831
Aor13HI TCCGGA 1 cut(s) 1256
AoxI GGCC 3 cut(s) 205, 746, 805
ApeKI GCWGC 1 cut(s) 50
Asp700I GAANNNNTTC 1 cut(s) 410
AspLEI GCGC 3 cut(s) 141, 528, 901
AspS9I GGNCC 3 cut(s) 296, 746, 752
AsuHPI GGTGA 5 cut(s) 107, 254, 346, 458, 979
AsuII TTCGAA 1 cut(s) 1066
AsuNHI GCTAGC 1 cut(s) 1217
AvaI CYCGRG 1 cut(s) 831
AvaII GGWCC 2 cut(s) 296, 752
BaeI ACNNNNGTAYC 2 cut(s) 675, 708
BalI TGGCCA 2 cut(s) 207, 807
BauI CACGAG 2 cut(s) 231, 687
Bbv12I GWGCWC 3 cut(s) 238, 832, 982
BbvI GCAGC 1 cut(s) 37
BccI CCATC 4 cut(s) 173, 464, 659, 773
BceAI ACGGC 1 cut(s) 44
BcgI CGANNNNNNTGC 2 cut(s) 535, 569
BciT130I CCWGG 1 cut(s) 750
BcoDI GTCTC 3 cut(s) 697, 837, 1254
BfaI CTAG 3 cut(s) 543, 1124, 1218
BfrI CTTAAG 1 cut(s) 934
BisI GCNGC 2 cut(s) 51, 952
BlsI GCNGC 2 cut(s) 52, 953
Bme1390I CCNGG 1 cut(s) 750
Bme18I GGWCC 2 cut(s) 296, 752
BmeT110I CYCGRG 1 cut(s) 831
BmgBI CACGTC 1 cut(s) 827
BmgT120I GGNCC 3 cut(s) 296, 746, 752
BmiI GGNNCC 1 cut(s) 747
BmrFI CCNGG 1 cut(s) 750
BmsI GCATC 5 cut(s) 186, 361, 469, 748, 910
BmtI GCTAGC 1 cut(s) 1221
Bpu14I TTCGAA 1 cut(s) 1066
Bsa29I ATCGAT 1 cut(s) 429
BsaAI YACGTR 1 cut(s) 958
BsaBI GATNNNNATC 1 cut(s) 420
BsaJI CCNNGG 3 cut(s) 134, 442, 983
BsaWI WCCGGW 1 cut(s) 1256
Bsc4I CCNNNNNNNGG 2 cut(s) 958, 1161
Bse8I GATNNNNATC 1 cut(s) 420
BseAI TCCGGA 1 cut(s) 1256
BseBI CCWGG 1 cut(s) 750
BseCI ATCGAT 1 cut(s) 429
BseDI CCNNGG 3 cut(s) 134, 442, 983
BseGI GGATG 4 cut(s) 184, 361, 670, 967
BseJI GATNNNNATC 1 cut(s) 420
BseLI CCNNNNNNNGG 2 cut(s) 958, 1161
BseRI GAGGAG 3 cut(s) 60, 300, 909
BseXI GCAGC 1 cut(s) 37
Bsh1236I CGCG 1 cut(s) 168
BshFI GGCC 3 cut(s) 207, 748, 807
BshVI ATCGAT 1 cut(s) 429
BsiHKAI GWGCWC 3 cut(s) 238, 832, 982
BsiHKCI CYCGRG 1 cut(s) 831
BsiSI CCGG 1 cut(s) 1257
BslFI GGGAC 1 cut(s) 1054
BslI CCNNNNNNNGG 2 cut(s) 958, 1161
BsmAI GTCTC 3 cut(s) 697, 837, 1254
BsmFI GGGAC 1 cut(s) 1054
BsnI GGCC 3 cut(s) 207, 748, 807
BsoBI CYCGRG 1 cut(s) 831
Bsp119I TTCGAA 1 cut(s) 1066
Bsp1286I GDGCHC 3 cut(s) 238, 832, 982
Bsp13I TCCGGA 1 cut(s) 1256
Bsp143I GATC 6 cut(s) 21, 426, 451, 587, 790, 1005
Bsp19I CCATGG 3 cut(s) 134, 442, 983
BspACI CCGC 2 cut(s) 715, 952
BspANI GGCC 3 cut(s) 207, 748, 807
BspDI ATCGAT 1 cut(s) 429
BspEI TCCGGA 1 cut(s) 1256
BspFNI CGCG 1 cut(s) 168
BspHI TCATGA 2 cut(s) 316, 399
BspLI GGNNCC 1 cut(s) 747
BspOI GCTAGC 1 cut(s) 1221
BspPI GGATC 2 cut(s) 446, 582
BspQI GCTCTTC 1 cut(s) 225
BspT104I TTCGAA 1 cut(s) 1066
BspTI CTTAAG 1 cut(s) 934
BssECI CCNNGG 3 cut(s) 134, 442, 983
BssMI GATC 6 cut(s) 21, 426, 451, 587, 790, 1005
BssNAI GTATAC 1 cut(s) 863
BssSI CACGAG 2 cut(s) 231, 687
BssT1I CCWWGG 3 cut(s) 134, 442, 983
Bst1107I GTATAC 1 cut(s) 863
Bst2BI CACGAG 2 cut(s) 231, 687
Bst2UI CCWGG 1 cut(s) 750
Bst4CI ACNGT 2 cut(s) 880, 1045
Bst6I CTCTTC 2 cut(s) 225, 318
BstAFI CTTAAG 1 cut(s) 934
BstBAI YACGTR 1 cut(s) 958
BstBI TTCGAA 1 cut(s) 1066
BstC8I GCNNGC 4 cut(s) 763, 805, 949, 1219
BstDEI CTNAG 2 cut(s) 495, 821
BstDSI CCRYGG 3 cut(s) 134, 442, 983
BstEII GGTNACC 1 cut(s) 242
BstF5I GGATG 4 cut(s) 184, 361, 670, 967
BstFNI CGCG 1 cut(s) 168
BstHHI GCGC 3 cut(s) 141, 528, 901
BstKTI GATC 6 cut(s) 24, 429, 454, 590, 793, 1008
BstMAI GTCTC 3 cut(s) 697, 837, 1254
BstMBI GATC 6 cut(s) 21, 426, 451, 587, 790, 1005
BstMWI GCNNNNNNNGC 6 cut(s) 56, 65, 380, 500, 523, 677
BstNI CCWGG 1 cut(s) 750
BstPI GGTNACC 1 cut(s) 242
BstSCI CCNGG 1 cut(s) 748
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 1 cut(s) 37
BstX2I RGATCY 1 cut(s) 587
BstYI RGATCY 1 cut(s) 587
BstZ17I GTATAC 1 cut(s) 863
Bsu15I ATCGAT 1 cut(s) 429
BsuRI GGCC 3 cut(s) 207, 748, 807
BsuTUI ATCGAT 1 cut(s) 429
BtgI CCRYGG 3 cut(s) 134, 442, 983
BtgZI GCGATG 2 cut(s) 887, 1071
BtrI CACGTC 1 cut(s) 827
BtsCI GGATG 4 cut(s) 184, 361, 670, 967
BtsI GCAGTG 1 cut(s) 208
BtsIMutI CAGTG 4 cut(s) 208, 528, 546, 889
Cac8I GCNNGC 4 cut(s) 763, 805, 949, 1219
CaiI CAGNNNCTG 1 cut(s) 755
CciI TCATGA 2 cut(s) 316, 399
CfoI GCGC 3 cut(s) 141, 528, 901
Cfr13I GGNCC 3 cut(s) 296, 746, 752
ClaI ATCGAT 1 cut(s) 429
Csp6I GTAC 4 cut(s) 474, 684, 1034, 1094
CviQI GTAC 4 cut(s) 474, 684, 1034, 1094
DdeI CTNAG 2 cut(s) 495, 821
DpnI GATC 6 cut(s) 23, 428, 453, 589, 792, 1007
DpnII GATC 6 cut(s) 21, 426, 451, 587, 790, 1005
DrdI GACNNNNNNGTC 2 cut(s) 251, 878
DseDI GACNNNNNNGTC 2 cut(s) 251, 878
EaeI YGGCCR 2 cut(s) 205, 805
Eam1104I CTCTTC 2 cut(s) 225, 318
EarI CTCTTC 2 cut(s) 225, 318
Eco130I CCWWGG 3 cut(s) 134, 442, 983
Eco32I GATATC 2 cut(s) 553, 1141
Eco47I GGWCC 2 cut(s) 296, 752
Eco57I CTGAAG 1 cut(s) 552
Eco88I CYCGRG 1 cut(s) 831
Eco91I GGTNACC 1 cut(s) 242
EcoO109I RGGNCCY 2 cut(s) 296, 752
EcoO65I GGTNACC 1 cut(s) 242
EcoRII CCWGG 1 cut(s) 748
EcoRV GATATC 2 cut(s) 553, 1141
EcoT14I CCWWGG 3 cut(s) 134, 442, 983
ErhI CCWWGG 3 cut(s) 134, 442, 983
FalI AAGNNNNNCTT 2 cut(s) 84, 116
FaqI GGGAC 1 cut(s) 1054
FauI CCCGC 1 cut(s) 722
FblI GTMKAC 1 cut(s) 862
Fnu4HI GCNGC 2 cut(s) 51, 952
FokI GGATG 4 cut(s) 191, 368, 677, 974
Fsp4HI GCNGC 2 cut(s) 51, 952
FspBI CTAG 3 cut(s) 543, 1124, 1218
GlaI GCGC 3 cut(s) 140, 527, 900
GluI GCNGC 2 cut(s) 51, 952
HaeIII GGCC 3 cut(s) 207, 748, 807
HapII CCGG 1 cut(s) 1257
HhaI GCGC 3 cut(s) 141, 528, 901
Hin6I GCGC 3 cut(s) 139, 526, 899
HinP1I GCGC 3 cut(s) 139, 526, 899
HindIII AAGCTT 1 cut(s) 1185
HinfI GANTC 2 cut(s) 817, 916
HpaII CCGG 1 cut(s) 1257
HphI GGTGA 5 cut(s) 107, 254, 346, 458, 979
Hpy166II GTNNAC 3 cut(s) 172, 863, 1152
Hpy188I TCNGA 7 cut(s) 29, 44, 65, 271, 370, 426, 1194
Hpy8I GTNNAC 3 cut(s) 172, 863, 1152
Hpy99I CGWCG 4 cut(s) 29, 65, 260, 275
HpyAV CCTTC 4 cut(s) 86, 493, 527, 1204
HpyCH4III ACNGT 2 cut(s) 880, 1045
HpyCH4IV ACGT 4 cut(s) 826, 957, 1148, 1198
HpyCH4V TGCA 5 cut(s) 199, 213, 488, 622, 761
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 65, 380, 500, 523, 677
HpyF3I CTNAG 2 cut(s) 495, 821
HpySE526I ACGT 4 cut(s) 826, 957, 1148, 1198
HspAI GCGC 3 cut(s) 139, 526, 899
Kpn2I TCCGGA 1 cut(s) 1256
Kzo9I GATC 6 cut(s) 21, 426, 451, 587, 790, 1005
LguI GCTCTTC 1 cut(s) 225
LmnI GCTCC 7 cut(s) 47, 65, 379, 668, 896, 930, 985
Lsp1109I GCAGC 1 cut(s) 37
LweI GCATC 5 cut(s) 186, 361, 469, 748, 910
MaeI CTAG 3 cut(s) 543, 1124, 1218
MaeII ACGT 4 cut(s) 826, 957, 1148, 1198
MaeIII GTNAC 4 cut(s) 242, 304, 509, 596
MalI GATC 6 cut(s) 23, 428, 453, 589, 792, 1007
MboI GATC 6 cut(s) 21, 426, 451, 587, 790, 1005
MfeI CAATTG 1 cut(s) 248
MflI RGATCY 1 cut(s) 587
MhlI GDGCHC 3 cut(s) 238, 832, 982
MlsI TGGCCA 2 cut(s) 207, 807
MluCI AATT 6 cut(s) 248, 279, 407, 629, 972, 1098
MluNI TGGCCA 2 cut(s) 207, 807
MmeI TCCRAC 4 cut(s) 7, 22, 43, 294
Mox20I TGGCCA 2 cut(s) 207, 807
MroI TCCGGA 1 cut(s) 1256
MroXI GAANNNNTTC 1 cut(s) 410
MscI TGGCCA 2 cut(s) 207, 807
MseI TTAA 3 cut(s) 90, 522, 935
MslI CAYNNNNRTG 1 cut(s) 447
Msp20I TGGCCA 2 cut(s) 207, 807
MspCI CTTAAG 1 cut(s) 934
MspI CCGG 1 cut(s) 1257
MspR9I CCNGG 1 cut(s) 750
MunI CAATTG 1 cut(s) 248
MvaI CCWGG 1 cut(s) 750
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 6 cut(s) 56, 65, 380, 500, 523, 677
NcoI CCATGG 3 cut(s) 134, 442, 983
NdeII GATC 6 cut(s) 21, 426, 451, 587, 790, 1005
NheI GCTAGC 1 cut(s) 1217
NlaIV GGNNCC 1 cut(s) 747
NmeAIII GCCGAG 1 cut(s) 1075
NmuCI GTSAC 2 cut(s) 242, 596
NspV TTCGAA 1 cut(s) 1066
PaeR7I CTCGAG 1 cut(s) 831
PagI TCATGA 2 cut(s) 316, 399
PciSI GCTCTTC 1 cut(s) 225
PcsI WCGNNNNNNNCGW 2 cut(s) 229, 1001
PdmI GAANNNNTTC 1 cut(s) 410
PfeI GAWTC 2 cut(s) 817, 916
PkrI GCNGC 2 cut(s) 52, 953
Ppu21I YACGTR 1 cut(s) 958
PpuMI RGGWCCY 2 cut(s) 296, 752
Psp5II RGGWCCY 2 cut(s) 296, 752
Psp6I CCWGG 1 cut(s) 748
PspEI GGTNACC 1 cut(s) 242
PspGI CCWGG 1 cut(s) 748
PspN4I GGNNCC 1 cut(s) 747
PspPI GGNCC 3 cut(s) 296, 746, 752
PspPPI RGGWCCY 2 cut(s) 296, 752
PstNI CAGNNNCTG 1 cut(s) 755
PsuI RGATCY 1 cut(s) 587
RsaI GTAC 4 cut(s) 475, 685, 1035, 1095
RsaNI GTAC 4 cut(s) 474, 684, 1034, 1094
RseI CAYNNNNRTG 1 cut(s) 447
SapI GCTCTTC 1 cut(s) 225
SaqAI TTAA 3 cut(s) 90, 522, 935
SatI GCNGC 2 cut(s) 51, 952
Sau3AI GATC 6 cut(s) 21, 426, 451, 587, 790, 1005
Sau96I GGNCC 3 cut(s) 296, 746, 752
ScrFI CCNGG 1 cut(s) 750
SduI GDGCHC 3 cut(s) 238, 832, 982
SfaNI GCATC 5 cut(s) 186, 361, 469, 748, 910
Sfr274I CTCGAG 1 cut(s) 831
SfuI TTCGAA 1 cut(s) 1066
SinI GGWCC 2 cut(s) 296, 752
SlaI CTCGAG 1 cut(s) 831
SmiMI CAYNNNNRTG 1 cut(s) 447
SmlI CTYRAG 2 cut(s) 831, 934
SmoI CTYRAG 2 cut(s) 831, 934
Sse9I AATT 6 cut(s) 248, 279, 407, 629, 972, 1098
SsiI CCGC 2 cut(s) 715, 952
SspMI CTAG 3 cut(s) 543, 1124, 1218
StyD4I CCNGG 1 cut(s) 748
StyI CCWWGG 3 cut(s) 134, 442, 983
TaaI ACNGT 2 cut(s) 880, 1045
TaiI ACGT 4 cut(s) 829, 960, 1151, 1201
TaqI TCGA 6 cut(s) 189, 414, 429, 832, 995, 1066
TasI AATT 6 cut(s) 248, 279, 407, 629, 972, 1098
TauI GCSGC 1 cut(s) 954
TfiI GAWTC 2 cut(s) 817, 916
Tru1I TTAA 3 cut(s) 90, 522, 935
Tru9I TTAA 3 cut(s) 90, 522, 935
TscAI CASTG 4 cut(s) 215, 535, 553, 889
TseFI GTSAC 2 cut(s) 242, 596
TseI GCWGC 1 cut(s) 50
Tsp45I GTSAC 2 cut(s) 242, 596
TspDTI ATGAA 9 cut(s) 68, 305, 333, 372, 388, 416, 929, 939, 1197
TspGWI ACGGA 3 cut(s) 93, 404, 1074
TspRI CASTG 4 cut(s) 215, 535, 553, 889
Vha464I CTTAAG 1 cut(s) 934
VpaK11BI GGWCC 2 cut(s) 296, 752
XbaI TCTAGA 1 cut(s) 1123
XhoI CTCGAG 1 cut(s) 831
XmiI GTMKAC 1 cut(s) 862
XmnI GAANNNNTTC 1 cut(s) 410
XspI CTAG 3 cut(s) 543, 1124, 1218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.