Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003202

Physical Location & Seq

Genomic Coordinates Forward (+)

5398471 .. 5402450

Gene Structure 3980 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g09110.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGGTCTCGATGCGGGTCAGTCCGAGAATGCGCGCAGCTGGGCGAGGTTCGTCGCCACGTGTCTCGTCGGCGGCGTCGTCGTGGCGGTCGGGATCGGCGTCGGAGTCTCCATGCTCGGCTCCGACCGCGGCGGGCCCCACCTCCTCCCTCTGCCGATTCGGTGGCGCAGGAAGAAGAACCGCCCCGTCCGGGTCTACATGGACGGCTGCTTCGACATGATGCACTACGGCCACTGCAACGCGCTCCGTCAGGCGCGTGCCCTCGGCGACCAATTGGTCGTCGGCGTCGTCAGCGACGCCGAAATCATCGTCAATAAAGGTCCTCCGGTCACTCCTCTCAACGAAAGGATGATAATGGTTAAAGCTGTGAAATGGGTTGATGAGGTTATTCCGGATGCACCGTATGCTATAACCGAAGAGTTTATGAAGAAGTTGTTTGATGAGTATGATATAGACTATATAATCCACGGGGATGATCCTTGTGTTCTTCCTGATGGAACCGACGCGTATGCCCTTGCGAAGAAAGCCGGGCGCTACAAGCAGATCAAACGTACAGAAGGGGTTTCGAGCACTGACATTGTTGGGCGTATGCTTCTATGTGTGAGAGAGAGATCGGTTAATGAGAACCGGAACCATTCTTCATTGCAAAGACAGTTCAGCCATGGACACGGTCAGAAGCTTGAAGATGGTGGATCCGGCAGTGGAACTCGTGTGTCTCATTTCCTGCCAACATCTCGTAGAATTGTTCAGTTCTCTAATGGAAAAGGACCTCAGTCGGATGCGCGCATAATATATATAGATGGTGCATTTGATCTCTTTCATGCTGGACATGTCGAGATCTTGAGGGTTGCTCGAGAGCTTGGGGATTTTCTTCTTGTTGGAATACACACTGATCAAACTGTCAGTGCTAATAGAGGTGCACATCGCCCAATCATGAACCTTCATGAAAGAAGCCTAAGTGTTTTGGGTTGCCGCTATGTGGATGAGGTCATAATTGGTGCTCCGTGGGAAATTACAAAAGACGTGATTACTACTTTCAATATCTCTTTGGTTGTCCATGGGACAGTAGCTGAGAACAACAATTTTGAGAAGGAGACGGGCAATCCATATGAAGTTCCAATCAGTATGGGTATCTTTAAAGTTTTGGCAAGCCCTCTTGATATTACAACTTCCACGATAATTAGGAGGATTGTATCTAATCATGAAGCATACCAGAAACGAAATGATAAGAAGGCAGCTAGTGAGCAAAAGTATTATGAGGGCAAGTCTTATGTTACTGGTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004306 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006629 GO:0006644 GO:0006646 GO:0006650 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009987 GO:0016020 GO:0016021 GO:0016740 GO:0016772 GO:0016779 GO:0019637 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045017 GO:0046337 GO:0046474 GO:0046486 GO:0070567 GO:0071704 GO:0090407 GO:0098573 GO:0098588 GO:0098805 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00440 ko00564 ko01100 map00440 map00564 map01100

Pfam Domains

Protein Families

CTP_transf_like

Protein Analysis

429

Amino Acids

47.41

Weight (kDa)

8.13

Isoelectric Point (pI)

35.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_transf_like	PF01467	66 - 195	8e-26	Cytidylyltransferase-like
CTP_transf_like	PF01467	265 - 395	3.1e-19	Cytidylyltransferase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38670
fragaria_vesca	FvH4_4g06460 FvH4_4g06460 FvH4_4g06460 FvH4_4g06460 FvH4_4g06460 FvH4_4g06460 FvH4_6g09110
malus_domestica	MD04G1180800.v1.1 MD12G1196100.v1.1 MD13G1236200.v1.1 MD16G1241200.v1.1
prunus_persica	Prupe.1G067900_v2.0.a1 Prupe.1G067900_v2.0.a1 Prupe.6G300600_v2.0.a1
pyrus_communis	pycom04g15990 pycom13g20890 pycom16g20190
rosa_chinensis	RchiOBHm_Chr3g0459321 RchiOBHm_Chr4g0398251
rosa_laevigata	RLG00000009374 RLG00000025091
rosa_multiflora	Rmu_sc0006944.1_g000005 Rmu_ssc0000112.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343230 Rroxscaffold_6G00420270
rosa_rugosa	Rorug03G0035300 Rorug04G0007100 Rorug04G0007100 Rorug04G0007100
rosa_samantha	Rh3AG093300 Rh4AG084600 Rh4BG082000 Rh4CG092000 Rh4DG077100
rosa_wichuraiana	Rw3G008030 Rw4G007030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	275
AccI	GTMKAC	1 cut(s)	195
AccII	CGCG	6 cut(s)	34, 129, 242, 256, 506, 784
AccIII	TCCGGA	1 cut(s)	391
AciI	CCGC	8 cut(s)	14, 72, 86, 127, 129, 132, 181, 973
AclWI	GGATC	4 cut(s)	101, 470, 687, 700
AcoI	YGGCCR	1 cut(s)	229
AcvI	CACGTG	1 cut(s)	60
AcyI	GRCGYC	4 cut(s)	75, 99, 285, 297
AfaI	GTAC	1 cut(s)	553
AfiI	CCNNNNNNNGG	2 cut(s)	190, 979
AflIII	ACRYGT	3 cut(s)	59, 504, 829
AgsI	TTSAA	2 cut(s)	683, 1039
AjiI	CACGTC	1 cut(s)	1024
AluBI	AGCT	6 cut(s)	39, 365, 679, 859, 1070, 1238
AluI	AGCT	6 cut(s)	39, 365, 679, 859, 1070, 1238
Alw21I	GWGCWC	3 cut(s)	572, 922, 1003
Alw26I	GTCTC	5 cut(s)	11, 68, 112, 720, 1088
Alw44I	GTGCAC	1 cut(s)	918
AlwI	GGATC	4 cut(s)	101, 470, 687, 700
AlwNI	CAGNNNCTG	1 cut(s)	1070
Ama87I	CYCGRG	1 cut(s)	852
Aor13HI	TCCGGA	1 cut(s)	391
AoxI	GGCC	2 cut(s)	134, 229
ApaI	GGGCCC	1 cut(s)	138
ApaLI	GTGCAC	1 cut(s)	918
ApeKI	GCWGC	3 cut(s)	36, 207, 1235
ArsI	GACNNNNNNTTYG	4 cut(s)	194, 226, 294, 326
AspLEI	GCGC	8 cut(s)	34, 36, 168, 244, 256, 534, 784, 786
AspS9I	GGNCC	4 cut(s)	134, 135, 320, 767
AsuC2I	CCSGG	2 cut(s)	191, 529
AvaI	CYCGRG	1 cut(s)	852
AvaII	GGWCC	2 cut(s)	320, 767
BaeGI	GKGCMC	3 cut(s)	138, 262, 922
BamHI	GGATCC	1 cut(s)	692
BanII	GRGCYC	1 cut(s)	138
BauI	CACGAG	1 cut(s)	708
BbrPI	CACGTG	1 cut(s)	60
Bbv12I	GWGCWC	3 cut(s)	572, 922, 1003
BbvI	GCAGC	3 cut(s)	48, 194, 1247
BccI	CCATC	3 cut(s)	488, 680, 794
BceAI	ACGGC	2 cut(s)	220, 244
BcgI	CGANNNNNNTGC	2 cut(s)	491, 525
BclI	TGATCA	1 cut(s)	892
BcnI	CCSGG	2 cut(s)	191, 529
BcoDI	GTCTC	5 cut(s)	11, 68, 112, 720, 1088
BfaI	CTAG	1 cut(s)	1239
BfoI	RGCGCY	1 cut(s)	535
BglII	AGATCT	1 cut(s)	837
BisI	GCNGC	6 cut(s)	37, 73, 130, 208, 973, 1236
BlsI	GCNGC	6 cut(s)	38, 74, 131, 209, 974, 1237
Bme1390I	CCNGG	2 cut(s)	191, 529
Bme18I	GGWCC	2 cut(s)	320, 767
BmeT110I	CYCGRG	1 cut(s)	852
BmgBI	CACGTC	1 cut(s)	1024
BmgT120I	GGNCC	4 cut(s)	134, 135, 320, 767
BmiI	GGNNCC	6 cut(s)	121, 136, 137, 499, 632, 694
BmrFI	CCNGG	2 cut(s)	191, 529
BmsI	GCATC	3 cut(s)	210, 385, 769
BoxI	GACNNNNGTC	1 cut(s)	772
BplI	GAGNNNNNCTC	2 cut(s)	835, 867
BpuEI	CTTGAG	1 cut(s)	862
BpuMI	CCSGG	2 cut(s)	191, 529
BsaAI	YACGTR	1 cut(s)	60
BsaHI	GRCGYC	4 cut(s)	75, 99, 285, 297
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	6 cut(s)	127, 262, 466, 661, 1004, 1057
BsaWI	WCCGGW	3 cut(s)	325, 391, 627
Bsc4I	CCNNNNNNNGG	2 cut(s)	190, 979
Bse1I	ACTGG	1 cut(s)	1282
Bse3DI	GCAATG	1 cut(s)	641
BseAI	TCCGGA	1 cut(s)	391
BseDI	CCNNGG	6 cut(s)	127, 262, 466, 661, 1004, 1057
BseGI	GGATG	5 cut(s)	354, 400, 478, 784, 988
BseLI	CCNNNNNNNGG	2 cut(s)	190, 979
BseMI	GCAATG	1 cut(s)	641
BseMII	CTCAG	2 cut(s)	785, 1062
BseNI	ACTGG	1 cut(s)	1282
BsePI	GCGCGC	2 cut(s)	32, 782
BseRI	GAGGAG	2 cut(s)	134, 324
BseSI	GKGCMC	3 cut(s)	138, 262, 922
BseXI	GCAGC	3 cut(s)	48, 194, 1247
BseYI	CCCAGC	1 cut(s)	39
Bsh1236I	CGCG	6 cut(s)	34, 129, 242, 256, 506, 784
Bsh1285I	CGRYCG	2 cut(s)	90, 127
BshFI	GGCC	2 cut(s)	136, 231
BsiEI	CGRYCG	2 cut(s)	90, 127
BsiHKAI	GWGCWC	3 cut(s)	572, 922, 1003
BsiHKCI	CYCGRG	1 cut(s)	852
BsiSI	CCGG	6 cut(s)	190, 326, 392, 528, 628, 696
BslFI	GGGAC	1 cut(s)	1075
BslI	CCNNNNNNNGG	2 cut(s)	190, 979
BsmAI	GTCTC	5 cut(s)	11, 68, 112, 720, 1088
BsmBI	CGTCTC	1 cut(s)	1088
BsmFI	GGGAC	1 cut(s)	1075
BsmI	GAATGC	1 cut(s)	34
BsnI	GGCC	2 cut(s)	136, 231
Bso31I	GGTCTC	1 cut(s)	11
BsoBI	CYCGRG	1 cut(s)	852
Bsp120I	GGGCCC	1 cut(s)	134
Bsp1286I	GDGCHC	5 cut(s)	138, 262, 572, 922, 1003
Bsp13I	TCCGGA	1 cut(s)	391
Bsp143I	GATC	8 cut(s)	93, 475, 543, 611, 692, 811, 837, 892
Bsp19I	CCATGG	2 cut(s)	661, 1057
BspACI	CCGC	8 cut(s)	14, 72, 86, 127, 129, 132, 181, 973
BspANI	GGCC	2 cut(s)	136, 231
BspCNI	CTCAG	2 cut(s)	784, 1063
BspEI	TCCGGA	1 cut(s)	391
BspFNI	CGCG	6 cut(s)	34, 129, 242, 256, 506, 784
BspHI	TCATGA	3 cut(s)	933, 943, 1201
BspLI	GGNNCC	6 cut(s)	121, 136, 137, 499, 632, 694
BspPI	GGATC	4 cut(s)	101, 470, 687, 700
BspTNI	GGTCTC	1 cut(s)	11
BsrDI	GCAATG	1 cut(s)	641
BsrI	ACTGG	1 cut(s)	1282
BssECI	CCNNGG	6 cut(s)	127, 262, 466, 661, 1004, 1057
BssHII	GCGCGC	2 cut(s)	32, 782
BssMI	GATC	8 cut(s)	93, 475, 543, 611, 692, 811, 837, 892
BssNI	GRCGYC	4 cut(s)	75, 99, 285, 297
BssSI	CACGAG	1 cut(s)	708
BssT1I	CCWWGG	2 cut(s)	661, 1057
Bst2BI	CACGAG	1 cut(s)	708
Bst4CI	ACNGT	5 cut(s)	402, 654, 671, 901, 1066
Bst6I	CTCTTC	1 cut(s)	411
BstACI	GRCGYC	4 cut(s)	75, 99, 285, 297
BstAPI	GCANNNNNTGC	1 cut(s)	404
BstBAI	YACGTR	1 cut(s)	60
BstC8I	GCNNGC	5 cut(s)	34, 134, 258, 784, 1150
BstDEI	CTNAG	3 cut(s)	771, 956, 1071
BstDSI	CCRYGG	5 cut(s)	127, 466, 661, 1004, 1057
BstF5I	GGATG	5 cut(s)	354, 400, 478, 784, 988
BstFNI	CGCG	6 cut(s)	34, 129, 242, 256, 506, 784
BstH2I	RGCGCY	1 cut(s)	535
BstHHI	GCGC	8 cut(s)	34, 36, 168, 244, 256, 534, 784, 786
BstKTI	GATC	8 cut(s)	96, 478, 546, 614, 695, 814, 840, 895
BstMAI	GTCTC	5 cut(s)	11, 68, 112, 720, 1088
BstMBI	GATC	8 cut(s)	93, 475, 543, 611, 692, 811, 837, 892
BstMCI	CGRYCG	2 cut(s)	90, 127
BstMWI	GCNNNNNNNGC	5 cut(s)	126, 291, 404, 524, 538
BstNSI	RCATGY	1 cut(s)	833
BstPAI	GACNNNNGTC	1 cut(s)	772
BstSCI	CCNGG	2 cut(s)	189, 527
BstSLI	GKGCMC	3 cut(s)	138, 262, 922
BstUI	CGCG	6 cut(s)	34, 129, 242, 256, 506, 784
BstV1I	GCAGC	3 cut(s)	48, 194, 1247
BstX2I	RGATCY	2 cut(s)	692, 837
BstYI	RGATCY	2 cut(s)	692, 837
BsuRI	GGCC	2 cut(s)	136, 231
BtgI	CCRYGG	5 cut(s)	127, 466, 661, 1004, 1057
BtgZI	GCGATG	1 cut(s)	908
BtrI	CACGTC	1 cut(s)	1024
BtsCI	GGATG	5 cut(s)	354, 400, 478, 784, 988
BtsI	GCAGTG	2 cut(s)	232, 706
BtsIMutI	CAGTG	5 cut(s)	232, 570, 706, 888, 910
Cac8I	GCNNGC	5 cut(s)	34, 134, 258, 784, 1150
CaiI	CAGNNNCTG	1 cut(s)	1070
CciI	TCATGA	3 cut(s)	933, 943, 1201
CfoI	GCGC	8 cut(s)	34, 36, 168, 244, 256, 534, 784, 786
Cfr13I	GGNCC	4 cut(s)	134, 135, 320, 767
Cfr42I	CCGCGG	1 cut(s)	130
CseI	GACGC	5 cut(s)	64, 88, 274, 305, 512
Csp6I	GTAC	1 cut(s)	552
CviQI	GTAC	1 cut(s)	552
DdeI	CTNAG	3 cut(s)	771, 956, 1071
DpnI	GATC	8 cut(s)	95, 477, 545, 613, 694, 813, 839, 894
DpnII	GATC	8 cut(s)	93, 475, 543, 611, 692, 811, 837, 892
DraI	TTTAAA	1 cut(s)	1138
DrdI	GACNNNNNNGTC	1 cut(s)	275
DseDI	GACNNNNNNGTC	1 cut(s)	275
EaeI	YGGCCR	1 cut(s)	229
Eam1104I	CTCTTC	1 cut(s)	411
EarI	CTCTTC	1 cut(s)	411
Eco130I	CCWWGG	2 cut(s)	661, 1057
Eco24I	GRGCYC	1 cut(s)	138
Eco31I	GGTCTC	1 cut(s)	11
Eco47I	GGWCC	2 cut(s)	320, 767
Eco72I	CACGTG	1 cut(s)	60
Eco88I	CYCGRG	1 cut(s)	852
EcoO109I	RGGNCCY	3 cut(s)	135, 320, 767
EcoT14I	CCWWGG	2 cut(s)	661, 1057
EcoT38I	GRGCYC	1 cut(s)	138
ErhI	CCWWGG	2 cut(s)	661, 1057
Esp3I	CGTCTC	1 cut(s)	1088
FaqI	GGGAC	1 cut(s)	1075
FauI	CCCGC	2 cut(s)	7, 125
FauNDI	CATATG	1 cut(s)	1108
FbaI	TGATCA	1 cut(s)	892
FblI	GTMKAC	1 cut(s)	195
Fnu4HI	GCNGC	6 cut(s)	37, 73, 130, 208, 973, 1236
FokI	GGATG	5 cut(s)	361, 407, 485, 791, 995
FriOI	GRGCYC	1 cut(s)	138
Fsp4HI	GCNGC	6 cut(s)	37, 73, 130, 208, 973, 1236
FspBI	CTAG	1 cut(s)	1239
GlaI	GCGC	8 cut(s)	33, 35, 167, 243, 255, 533, 783, 785
GluI	GCNGC	6 cut(s)	37, 73, 130, 208, 973, 1236
GsaI	CCCAGC	1 cut(s)	43
HaeII	RGCGCY	1 cut(s)	535
HaeIII	GGCC	2 cut(s)	136, 231
HapII	CCGG	6 cut(s)	190, 326, 392, 528, 628, 696
HgaI	GACGC	5 cut(s)	64, 88, 274, 305, 512
HhaI	GCGC	8 cut(s)	34, 36, 168, 244, 256, 534, 784, 786
Hin1I	GRCGYC	4 cut(s)	75, 99, 285, 297
Hin6I	GCGC	8 cut(s)	32, 34, 166, 242, 254, 532, 782, 784
HinP1I	GCGC	8 cut(s)	32, 34, 166, 242, 254, 532, 782, 784
HindIII	AAGCTT	1 cut(s)	677
HinfI	GANTC	2 cut(s)	105, 157
HpaII	CCGG	6 cut(s)	190, 326, 392, 528, 628, 696
Hpy166II	GTNNAC	2 cut(s)	196, 920
Hpy188I	TCNGA	5 cut(s)	25, 104, 124, 675, 778
Hpy8I	GTNNAC	2 cut(s)	196, 920
Hpy99I	CGWCG	9 cut(s)	56, 71, 80, 83, 104, 284, 290, 299, 506
HpyAV	CCTTC	4 cut(s)	551, 950, 1084, 1225
HpyCH4III	ACNGT	5 cut(s)	402, 654, 671, 901, 1066
HpyCH4IV	ACGT	3 cut(s)	59, 550, 1023
HpyCH4V	TGCA	6 cut(s)	223, 237, 398, 646, 806, 920
HpyF10VI	GCNNNNNNNGC	5 cut(s)	126, 291, 404, 524, 538
HpyF3I	CTNAG	3 cut(s)	771, 956, 1071
HpySE526I	ACGT	3 cut(s)	59, 550, 1023
Hsp92I	GRCGYC	4 cut(s)	75, 99, 285, 297
HspAI	GCGC	8 cut(s)	32, 34, 166, 242, 254, 532, 782, 784
Kpn2I	TCCGGA	1 cut(s)	391
Ksp22I	TGATCA	1 cut(s)	892
KspI	CCGCGG	1 cut(s)	130
Kzo9I	GATC	8 cut(s)	93, 475, 543, 611, 692, 811, 837, 892
LmnI	GCTCC	3 cut(s)	125, 249, 1006
Lsp1109I	GCAGC	3 cut(s)	48, 194, 1247
LweI	GCATC	3 cut(s)	210, 385, 769
MaeI	CTAG	1 cut(s)	1239
MaeII	ACGT	3 cut(s)	59, 550, 1023
MaeIII	GTNAC	2 cut(s)	328, 1273
MalI	GATC	8 cut(s)	95, 477, 545, 613, 694, 813, 839, 894
MboI	GATC	8 cut(s)	93, 475, 543, 611, 692, 811, 837, 892
MboII	GAAGA	9 cut(s)	184, 187, 428, 439, 479, 532, 630, 695, 863
MfeI	CAATTG	1 cut(s)	272
MflI	RGATCY	2 cut(s)	692, 837
MhlI	GDGCHC	5 cut(s)	138, 262, 572, 922, 1003
MluCI	AATT	6 cut(s)	272, 741, 993, 1011, 1081, 1179
MluI	ACGCGT	1 cut(s)	504
MlyI	GAGTC	1 cut(s)	114
MmeI	TCCRAC	4 cut(s)	82, 147, 756, 859
MroI	TCCGGA	1 cut(s)	391
MseI	TTAA	3 cut(s)	360, 618, 1137
MslI	CAYNNNNRTG	1 cut(s)	471
MspA1I	CMGCKG	2 cut(s)	39, 129
MspI	CCGG	6 cut(s)	190, 326, 392, 528, 628, 696
MspR9I	CCNGG	2 cut(s)	191, 529
MunI	CAATTG	1 cut(s)	272
Mva1269I	GAATGC	1 cut(s)	34
MvnI	CGCG	6 cut(s)	34, 129, 242, 256, 506, 784
MwoI	GCNNNNNNNGC	5 cut(s)	126, 291, 404, 524, 538
NciI	CCSGG	2 cut(s)	191, 529
NcoI	CCATGG	2 cut(s)	661, 1057
NdeI	CATATG	1 cut(s)	1108
NdeII	GATC	8 cut(s)	93, 475, 543, 611, 692, 811, 837, 892
NlaIV	GGNNCC	6 cut(s)	121, 136, 137, 499, 632, 694
NmeAIII	GCCGAG	2 cut(s)	96, 243
NmuCI	GTSAC	1 cut(s)	328
NspI	RCATGY	1 cut(s)	833
PaeR7I	CTCGAG	1 cut(s)	852
PagI	TCATGA	3 cut(s)	933, 943, 1201
PauI	GCGCGC	2 cut(s)	32, 782
PciI	ACATGT	1 cut(s)	829
PcsI	WCGNNNNNNNCGW	5 cut(s)	72, 75, 96, 210, 285
PctI	GAATGC	1 cut(s)	34
PfeI	GAWTC	1 cut(s)	157
PflFI	GACNNNGTC	1 cut(s)	669
PkrI	GCNGC	6 cut(s)	38, 74, 131, 209, 974, 1237
PleI	GAGTC	1 cut(s)	113
PmaCI	CACGTG	1 cut(s)	60
PmlI	CACGTG	1 cut(s)	60
PpsI	GAGTC	1 cut(s)	113
Ppu21I	YACGTR	1 cut(s)	60
PpuMI	RGGWCCY	2 cut(s)	320, 767
PscI	ACATGT	1 cut(s)	829
PshAI	GACNNNNGTC	1 cut(s)	772
Psp5II	RGGWCCY	2 cut(s)	320, 767
PspCI	CACGTG	1 cut(s)	60
PspFI	CCCAGC	1 cut(s)	39
PspN4I	GGNNCC	6 cut(s)	121, 136, 137, 499, 632, 694
PspOMI	GGGCCC	1 cut(s)	134
PspPI	GGNCC	4 cut(s)	134, 135, 320, 767
PspPPI	RGGWCCY	2 cut(s)	320, 767
PstNI	CAGNNNCTG	1 cut(s)	1070
PsuI	RGATCY	2 cut(s)	692, 837
PsyI	GACNNNGTC	1 cut(s)	669
PteI	GCGCGC	2 cut(s)	32, 782
PvuII	CAGCTG	1 cut(s)	39
RsaI	GTAC	1 cut(s)	553
RsaNI	GTAC	1 cut(s)	552
RseI	CAYNNNNRTG	1 cut(s)	471
SacII	CCGCGG	1 cut(s)	130
SaqAI	TTAA	3 cut(s)	360, 618, 1137
SatI	GCNGC	6 cut(s)	37, 73, 130, 208, 973, 1236
Sau3AI	GATC	8 cut(s)	93, 475, 543, 611, 692, 811, 837, 892
Sau96I	GGNCC	4 cut(s)	134, 135, 320, 767
SchI	GAGTC	1 cut(s)	114
ScrFI	CCNGG	2 cut(s)	191, 529
SduI	GDGCHC	5 cut(s)	138, 262, 572, 922, 1003
SfaNI	GCATC	3 cut(s)	210, 385, 769
Sfr274I	CTCGAG	1 cut(s)	852
Sfr303I	CCGCGG	1 cut(s)	130
SgrBI	CCGCGG	1 cut(s)	130
SinI	GGWCC	2 cut(s)	320, 767
SlaI	CTCGAG	1 cut(s)	852
SmiMI	CAYNNNNRTG	1 cut(s)	471
SmlI	CTYRAG	2 cut(s)	841, 852
SmoI	CTYRAG	2 cut(s)	841, 852
Sse9I	AATT	6 cut(s)	272, 741, 993, 1011, 1081, 1179
SsiI	CCGC	8 cut(s)	14, 72, 86, 127, 129, 132, 181, 973
SspMI	CTAG	1 cut(s)	1239
StyD4I	CCNGG	2 cut(s)	189, 527
StyI	CCWWGG	2 cut(s)	661, 1057
TaaI	ACNGT	5 cut(s)	402, 654, 671, 901, 1066
TaiI	ACGT	3 cut(s)	62, 553, 1026
TaqI	TCGA	5 cut(s)	9, 213, 566, 834, 853
TasI	AATT	6 cut(s)	272, 741, 993, 1011, 1081, 1179
TauI	GCSGC	3 cut(s)	75, 132, 975
TfiI	GAWTC	1 cut(s)	157
Tru1I	TTAA	3 cut(s)	360, 618, 1137
Tru9I	TTAA	3 cut(s)	360, 618, 1137
TscAI	CASTG	5 cut(s)	239, 577, 706, 895, 910
TseFI	GTSAC	1 cut(s)	328
TseI	GCWGC	3 cut(s)	36, 207, 1235
Tsp45I	GTSAC	1 cut(s)	328
TspDTI	ATGAA	8 cut(s)	440, 630, 809, 932, 950, 960, 1125, 1218
TspGWI	ACGGA	2 cut(s)	236, 993
TspRI	CASTG	5 cut(s)	239, 577, 706, 895, 910
Tth111I	GACNNNGTC	1 cut(s)	669
VneI	GTGCAC	1 cut(s)	918
VpaK11BI	GGWCC	2 cut(s)	320, 767
XceI	RCATGY	1 cut(s)	833
XhoI	CTCGAG	1 cut(s)	852
XmiI	GTMKAC	1 cut(s)	195
XspI	CTAG	1 cut(s)	1239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.