RLG00000025091

Ethanolamine-phosphate

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
41898542 .. 41901995
3454 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025091

Sequence Viewer

Length: 1284 bp
ATGGGTTTCGATGCGGGTCCGTCCGAGAATGAACGCAGCTGGGCGCGGTTCGTCGCCACGTGTCTCGTTGGCGGTGTGGTTGTGGCGGTCGGGATCGGCGTCGGAGTCTCCATGCTCGGCTCCTCCGAGCGTGGGCCCCACCTCCCTCTGCCAATTCGATGGAGGAGGAAGAAGAACAGACCCGTCCGAGTCTACATGGACGGCTGCTTTGATATGATGCACTACGGCCACTGCAACGCGCTCCGTCAGGCGCGTGCCCTCGGCGACCAATTGGTCGTCGGCGTTGTCAGCGACGCCGAAATCATCGTCAATAAAGGCCCCCCTGTAACCCCTCTCAACGAAAGGATGATTATGGTTAAAGCAGTGAAATGGGTTGATGAGGTTATTCCGGATGCACCATATGCTATAACTGAAGAGTTTATGAAGAAGTTGTTTGATGAGTATGATATAGACTATATCATTCATGGGGATGACCCATGTGTTCTTCCTGACGGAACCGACGCTTATGCCCTCGCAAAGAAAGCTGGGCGCTACAAGCAGATCAAACGTACCGAAGGGGTCTCCAGCACTGACATTGTTGGTCGTATGCTTCTGTGTGTGAGAGAGAGGTCAGTTACTGAAAACCGCAACCATTCTTCCTTGCAAAGACAGTTCAGCCATGGTCACAGTCAGAAGCTTGAAGATGGTGGATCGGGTAGTGGAACTCGTGTGTCTCACTTCCTGCCAACATCTCGTAGAATTGTTCAGTTTTCTAATGGAAAAGGACCTCAGTCGGATGCGCGCATTATATATATAGATGGTGCATTTGATCTTTTTCATGCTGGACATGTCGAGATCTTGAGGCTTGCTCGAGAACTTGGGGATTTTCTTCTTGTTGGAATACACACTGATCAAACTGTCAGTGCTAGTAGAGGTGCACATCGCCCCATCATGAACCTTCATGAAAGAAGCCTAAGTGTTTTGGGTTGCCGCTATGTGGATGAGGTTATAATTGGTGCTCCATGGGAAATTACAAAAGATGTGATCACTACTTTCAACATCTCTTTGGTTGTCCACGGGACAGTAGCTGAGAATAACAATTTTGAGAAGGAGACAGGCAATCCATATGAAGTTCCAATCAGTATGGGTATCTTTAAAGTTTTGGAAAGCCCGCTTGATATTACAACTTCCACCATAATTAGGAGGATTGTATCTAATCATGAAGCATACCAGAAACGAAATGAGAAGAAGGCAGCCAGTGAGAAGAAGTATTATGAAGGCAAGTCTTATGTCACTGGTGATTGA

Protein Analysis

428

Amino Acids

47.48

Weight (kDa)

7.7

Isoelectric Point (pI)

37.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTP_transf_like PF01467 65 - 194 7.9e-26 Cytidylyltransferase-like
CTP_transf_like PF01467 264 - 395 1.6e-18 Cytidylyltransferase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 989
AasI GACNNNNNNGTC 1 cut(s) 272
AccI GTMKAC 1 cut(s) 192
AccII CGCG 4 cut(s) 46, 239, 253, 781
AccIII TCCGGA 1 cut(s) 388
AciI CCGC 7 cut(s) 14, 46, 72, 86, 625, 970, 1151
AclWI GGATC 2 cut(s) 101, 697
AcoI YGGCCR 1 cut(s) 226
AcuI CTGAAG 1 cut(s) 432
AcvI CACGTG 1 cut(s) 60
AcyI GRCGYC 2 cut(s) 99, 294
AfaI GTAC 1 cut(s) 550
AfiI CCNNNNNNNGG 3 cut(s) 132, 976, 1179
AflIII ACRYGT 2 cut(s) 59, 826
AgsI TTSAA 2 cut(s) 680, 1036
AluBI AGCT 4 cut(s) 39, 524, 676, 1067
AluI AGCT 4 cut(s) 39, 524, 676, 1067
Alw21I GWGCWC 2 cut(s) 919, 1000
Alw26I GTCTC 5 cut(s) 68, 112, 565, 717, 1085
Alw44I GTGCAC 1 cut(s) 915
AlwI GGATC 2 cut(s) 101, 697
AlwNI CAGNNNCTG 2 cut(s) 617, 1067
Ama87I CYCGRG 1 cut(s) 849
Aor13HI TCCGGA 1 cut(s) 388
AoxI GGCC 3 cut(s) 134, 226, 316
ApaI GGGCCC 1 cut(s) 138
ApaLI GTGCAC 1 cut(s) 915
ApeKI GCWGC 3 cut(s) 36, 204, 1232
ArsI GACNNNNNNTTYG 4 cut(s) 191, 223, 291, 323
AspLEI GCGC 6 cut(s) 46, 241, 253, 531, 781, 783
AspS9I GGNCC 5 cut(s) 17, 134, 135, 317, 764
AvaI CYCGRG 1 cut(s) 849
AvaII GGWCC 2 cut(s) 17, 764
BaeGI GKGCMC 3 cut(s) 138, 259, 919
BanII GRGCYC 1 cut(s) 138
BauI CACGAG 1 cut(s) 705
BbrPI CACGTG 1 cut(s) 60
Bbv12I GWGCWC 2 cut(s) 919, 1000
BbvI GCAGC 3 cut(s) 48, 191, 1244
BccI CCATC 4 cut(s) 153, 677, 791, 935
BceAI ACGGC 2 cut(s) 217, 241
BcgI CGANNNNNNTGC 2 cut(s) 488, 522
BclI TGATCA 2 cut(s) 889, 1023
BcoDI GTCTC 5 cut(s) 68, 112, 565, 717, 1085
BfaI CTAG 1 cut(s) 906
BfoI RGCGCY 1 cut(s) 532
BglII AGATCT 1 cut(s) 834
BisI GCNGC 4 cut(s) 37, 205, 970, 1233
BlsI GCNGC 4 cut(s) 38, 206, 971, 1234
Bme18I GGWCC 2 cut(s) 17, 764
BmeT110I CYCGRG 1 cut(s) 849
BmgT120I GGNCC 5 cut(s) 17, 134, 135, 317, 764
BmiI GGNNCC 6 cut(s) 18, 121, 136, 137, 319, 496
BmsI GCATC 3 cut(s) 207, 382, 766
BoxI GACNNNNGTC 1 cut(s) 769
BplI GAGNNNNNCTC 2 cut(s) 832, 864
BpmI CTGGAG 1 cut(s) 547
BpuEI CTTGAG 1 cut(s) 859
BsaAI YACGTR 1 cut(s) 60
BsaHI GRCGYC 2 cut(s) 99, 294
BsaI GGTCTC 1 cut(s) 565
BsaJI CCNNGG 4 cut(s) 259, 658, 1001, 1054
BsaWI WCCGGW 1 cut(s) 388
Bsc4I CCNNNNNNNGG 3 cut(s) 132, 976, 1179
Bse1I ACTGG 2 cut(s) 1236, 1279
BseAI TCCGGA 1 cut(s) 388
BseDI CCNNGG 4 cut(s) 259, 658, 1001, 1054
BseGI GGATG 5 cut(s) 351, 397, 475, 781, 985
BseLI CCNNNNNNNGG 3 cut(s) 132, 976, 1179
BseMII CTCAG 2 cut(s) 782, 1059
BseNI ACTGG 2 cut(s) 1236, 1279
BsePI GCGCGC 1 cut(s) 779
BseRI GAGGAG 2 cut(s) 112, 178
BseSI GKGCMC 3 cut(s) 138, 259, 919
BseXI GCAGC 3 cut(s) 48, 191, 1244
BseYI CCCAGC 2 cut(s) 39, 524
Bsh1236I CGCG 4 cut(s) 46, 239, 253, 781
Bsh1285I CGRYCG 1 cut(s) 90
BshFI GGCC 3 cut(s) 136, 228, 318
BsiEI CGRYCG 1 cut(s) 90
BsiHKAI GWGCWC 2 cut(s) 919, 1000
BsiHKCI CYCGRG 1 cut(s) 849
BsiSI CCGG 1 cut(s) 389
BslFI GGGAC 1 cut(s) 1072
BslI CCNNNNNNNGG 3 cut(s) 132, 976, 1179
BsmAI GTCTC 5 cut(s) 68, 112, 565, 717, 1085
BsmFI GGGAC 1 cut(s) 1072
BsnI GGCC 3 cut(s) 136, 228, 318
Bso31I GGTCTC 1 cut(s) 565
BsoBI CYCGRG 1 cut(s) 849
Bsp120I GGGCCC 1 cut(s) 134
Bsp1286I GDGCHC 4 cut(s) 138, 259, 919, 1000
Bsp13I TCCGGA 1 cut(s) 388
Bsp143I GATC 7 cut(s) 93, 540, 689, 808, 834, 889, 1023
Bsp19I CCATGG 2 cut(s) 658, 1001
BspACI CCGC 7 cut(s) 14, 46, 72, 86, 625, 970, 1151
BspANI GGCC 3 cut(s) 136, 228, 318
BspCNI CTCAG 2 cut(s) 781, 1060
BspEI TCCGGA 1 cut(s) 388
BspFNI CGCG 4 cut(s) 46, 239, 253, 781
BspHI TCATGA 3 cut(s) 930, 940, 1198
BspLI GGNNCC 6 cut(s) 18, 121, 136, 137, 319, 496
BspPI GGATC 2 cut(s) 101, 697
BspTNI GGTCTC 1 cut(s) 565
BsrI ACTGG 2 cut(s) 1236, 1279
BssECI CCNNGG 4 cut(s) 259, 658, 1001, 1054
BssHII GCGCGC 1 cut(s) 779
BssMI GATC 7 cut(s) 93, 540, 689, 808, 834, 889, 1023
BssNI GRCGYC 2 cut(s) 99, 294
BssSI CACGAG 1 cut(s) 705
BssT1I CCWWGG 2 cut(s) 658, 1001
Bst2BI CACGAG 1 cut(s) 705
Bst4CI ACNGT 4 cut(s) 651, 668, 898, 1063
Bst6I CTCTTC 1 cut(s) 408
BstACI GRCGYC 2 cut(s) 99, 294
BstAPI GCANNNNNTGC 1 cut(s) 401
BstBAI YACGTR 1 cut(s) 60
BstC8I GCNNGC 4 cut(s) 255, 781, 846, 1151
BstDEI CTNAG 3 cut(s) 768, 953, 1068
BstDSI CCRYGG 3 cut(s) 658, 1001, 1054
BstF5I GGATG 5 cut(s) 351, 397, 475, 781, 985
BstFNI CGCG 4 cut(s) 46, 239, 253, 781
BstH2I RGCGCY 1 cut(s) 532
BstHHI GCGC 6 cut(s) 46, 241, 253, 531, 781, 783
BstKTI GATC 7 cut(s) 96, 543, 692, 811, 837, 892, 1026
BstMAI GTCTC 5 cut(s) 68, 112, 565, 717, 1085
BstMBI GATC 7 cut(s) 93, 540, 689, 808, 834, 889, 1023
BstMCI CGRYCG 1 cut(s) 90
BstMWI GCNNNNNNNGC 4 cut(s) 288, 401, 521, 535
BstNSI RCATGY 1 cut(s) 830
BstPAI GACNNNNGTC 1 cut(s) 769
BstSLI GKGCMC 3 cut(s) 138, 259, 919
BstUI CGCG 4 cut(s) 46, 239, 253, 781
BstV1I GCAGC 3 cut(s) 48, 191, 1244
BstX2I RGATCY 1 cut(s) 834
BstXI CCANNNNNNTGG 1 cut(s) 159
BstYI RGATCY 1 cut(s) 834
BsuRI GGCC 3 cut(s) 136, 228, 318
BtgI CCRYGG 3 cut(s) 658, 1001, 1054
BtgZI GCGATG 1 cut(s) 905
BtsCI GGATG 5 cut(s) 351, 397, 475, 781, 985
BtsI GCAGTG 2 cut(s) 229, 369
BtsIMutI CAGTG 7 cut(s) 229, 369, 567, 885, 907, 1243, 1272
Cac8I GCNNGC 4 cut(s) 255, 781, 846, 1151
CaiI CAGNNNCTG 2 cut(s) 617, 1067
CciI TCATGA 3 cut(s) 930, 940, 1198
CfoI GCGC 6 cut(s) 46, 241, 253, 531, 781, 783
Cfr13I GGNCC 5 cut(s) 17, 134, 135, 317, 764
CseI GACGC 3 cut(s) 88, 302, 509
Csp6I GTAC 1 cut(s) 549
CviQI GTAC 1 cut(s) 549
DdeI CTNAG 3 cut(s) 768, 953, 1068
DpnI GATC 7 cut(s) 95, 542, 691, 810, 836, 891, 1025
DpnII GATC 7 cut(s) 93, 540, 689, 808, 834, 889, 1023
DraI TTTAAA 1 cut(s) 1135
DrdI GACNNNNNNGTC 1 cut(s) 272
DseDI GACNNNNNNGTC 1 cut(s) 272
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 1 cut(s) 408
EarI CTCTTC 1 cut(s) 408
Eco130I CCWWGG 2 cut(s) 658, 1001
Eco24I GRGCYC 1 cut(s) 138
Eco31I GGTCTC 1 cut(s) 565
Eco47I GGWCC 2 cut(s) 17, 764
Eco57I CTGAAG 1 cut(s) 432
Eco72I CACGTG 1 cut(s) 60
Eco88I CYCGRG 1 cut(s) 849
EcoO109I RGGNCCY 3 cut(s) 135, 317, 764
EcoT14I CCWWGG 2 cut(s) 658, 1001
EcoT38I GRGCYC 1 cut(s) 138
ErhI CCWWGG 2 cut(s) 658, 1001
FaqI GGGAC 1 cut(s) 1072
FauI CCCGC 2 cut(s) 7, 1158
FauNDI CATATG 2 cut(s) 400, 1105
FbaI TGATCA 2 cut(s) 889, 1023
FblI GTMKAC 1 cut(s) 192
Fnu4HI GCNGC 4 cut(s) 37, 205, 970, 1233
FokI GGATG 5 cut(s) 358, 404, 482, 788, 992
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 4 cut(s) 37, 205, 970, 1233
FspBI CTAG 1 cut(s) 906
GlaI GCGC 6 cut(s) 45, 240, 252, 530, 780, 782
GluI GCNGC 4 cut(s) 37, 205, 970, 1233
GsaI CCCAGC 2 cut(s) 43, 528
GsuI CTGGAG 1 cut(s) 547
HaeII RGCGCY 1 cut(s) 532
HaeIII GGCC 3 cut(s) 136, 228, 318
HapII CCGG 1 cut(s) 389
HgaI GACGC 3 cut(s) 88, 302, 509
HhaI GCGC 6 cut(s) 46, 241, 253, 531, 781, 783
Hin1I GRCGYC 2 cut(s) 99, 294
Hin6I GCGC 6 cut(s) 44, 239, 251, 529, 779, 781
HinP1I GCGC 6 cut(s) 44, 239, 251, 529, 779, 781
HindIII AAGCTT 1 cut(s) 674
HinfI GANTC 2 cut(s) 105, 189
HpaII CCGG 1 cut(s) 389
Hpy166II GTNNAC 3 cut(s) 193, 917, 1054
Hpy188I TCNGA 6 cut(s) 25, 104, 127, 188, 672, 775
Hpy188III TCNNGA 9 cut(s) 91, 389, 488, 832, 838, 851, 931, 941, 1199
Hpy8I GTNNAC 3 cut(s) 193, 917, 1054
Hpy99I CGWCG 5 cut(s) 56, 104, 281, 296, 503
HpyAV CCTTC 5 cut(s) 548, 947, 1081, 1222, 1250
HpyCH4III ACNGT 4 cut(s) 651, 668, 898, 1063
HpyCH4IV ACGT 2 cut(s) 59, 547
HpyCH4V TGCA 6 cut(s) 220, 234, 395, 643, 803, 917
HpyF10VI GCNNNNNNNGC 4 cut(s) 288, 401, 521, 535
HpyF3I CTNAG 3 cut(s) 768, 953, 1068
HpySE526I ACGT 2 cut(s) 59, 547
Hsp92I GRCGYC 2 cut(s) 99, 294
HspAI GCGC 6 cut(s) 44, 239, 251, 529, 779, 781
Kpn2I TCCGGA 1 cut(s) 388
Ksp22I TGATCA 2 cut(s) 889, 1023
Kzo9I GATC 7 cut(s) 93, 540, 689, 808, 834, 889, 1023
LmnI GCTCC 3 cut(s) 125, 246, 1003
Lsp1109I GCAGC 3 cut(s) 48, 191, 1244
LweI GCATC 3 cut(s) 207, 382, 766
MaeI CTAG 1 cut(s) 906
MaeII ACGT 2 cut(s) 59, 547
MaeIII GTNAC 4 cut(s) 325, 613, 662, 1270
MalI GATC 7 cut(s) 95, 542, 691, 810, 836, 891, 1025
MboI GATC 7 cut(s) 93, 540, 689, 808, 834, 889, 1023
MfeI CAATTG 1 cut(s) 269
MflI RGATCY 1 cut(s) 834
MhlI GDGCHC 4 cut(s) 138, 259, 919, 1000
MluCI AATT 7 cut(s) 153, 269, 738, 990, 1008, 1078, 1176
MlyI GAGTC 2 cut(s) 114, 198
MmeI TCCRAC 3 cut(s) 82, 753, 856
MroI TCCGGA 1 cut(s) 388
MseI TTAA 2 cut(s) 357, 1134
MslI CAYNNNNRTG 1 cut(s) 468
MspA1I CMGCKG 1 cut(s) 39
MspI CCGG 1 cut(s) 389
MunI CAATTG 1 cut(s) 269
MvnI CGCG 4 cut(s) 46, 239, 253, 781
MwoI GCNNNNNNNGC 4 cut(s) 288, 401, 521, 535
NcoI CCATGG 2 cut(s) 658, 1001
NdeI CATATG 2 cut(s) 400, 1105
NdeII GATC 7 cut(s) 93, 540, 689, 808, 834, 889, 1023
NlaIV GGNNCC 6 cut(s) 18, 121, 136, 137, 319, 496
NmeAIII GCCGAG 2 cut(s) 96, 240
NmuCI GTSAC 2 cut(s) 662, 1270
NspI RCATGY 1 cut(s) 830
PaeR7I CTCGAG 1 cut(s) 849
PagI TCATGA 3 cut(s) 930, 940, 1198
PauI GCGCGC 1 cut(s) 779
PciI ACATGT 1 cut(s) 826
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 123
PkrI GCNGC 4 cut(s) 38, 206, 971, 1234
PleI GAGTC 2 cut(s) 113, 197
PmaCI CACGTG 1 cut(s) 60
PmlI CACGTG 1 cut(s) 60
PpsI GAGTC 2 cut(s) 113, 197
Ppu21I YACGTR 1 cut(s) 60
PpuMI RGGWCCY 1 cut(s) 764
PscI ACATGT 1 cut(s) 826
PshAI GACNNNNGTC 1 cut(s) 769
PsiI TTATAA 1 cut(s) 989
Psp5II RGGWCCY 1 cut(s) 764
PspCI CACGTG 1 cut(s) 60
PspFI CCCAGC 2 cut(s) 39, 524
PspN4I GGNNCC 6 cut(s) 18, 121, 136, 137, 319, 496
PspOMI GGGCCC 1 cut(s) 134
PspPI GGNCC 5 cut(s) 17, 134, 135, 317, 764
PspPPI RGGWCCY 1 cut(s) 764
PstNI CAGNNNCTG 2 cut(s) 617, 1067
PsuI RGATCY 1 cut(s) 834
PteI GCGCGC 1 cut(s) 779
PvuII CAGCTG 1 cut(s) 39
RsaI GTAC 1 cut(s) 550
RsaNI GTAC 1 cut(s) 549
RseI CAYNNNNRTG 1 cut(s) 468
SaqAI TTAA 2 cut(s) 357, 1134
SatI GCNGC 4 cut(s) 37, 205, 970, 1233
Sau3AI GATC 7 cut(s) 93, 540, 689, 808, 834, 889, 1023
Sau96I GGNCC 5 cut(s) 17, 134, 135, 317, 764
SchI GAGTC 2 cut(s) 114, 198
SduI GDGCHC 4 cut(s) 138, 259, 919, 1000
SfaNI GCATC 3 cut(s) 207, 382, 766
Sfr274I CTCGAG 1 cut(s) 849
SinI GGWCC 2 cut(s) 17, 764
SlaI CTCGAG 1 cut(s) 849
SmiMI CAYNNNNRTG 1 cut(s) 468
SmlI CTYRAG 2 cut(s) 838, 849
SmoI CTYRAG 2 cut(s) 838, 849
Sse9I AATT 7 cut(s) 153, 269, 738, 990, 1008, 1078, 1176
SsiI CCGC 7 cut(s) 14, 46, 72, 86, 625, 970, 1151
SspMI CTAG 1 cut(s) 906
StyI CCWWGG 2 cut(s) 658, 1001
TaaI ACNGT 4 cut(s) 651, 668, 898, 1063
TaiI ACGT 2 cut(s) 62, 550
TaqI TCGA 4 cut(s) 9, 157, 831, 850
TasI AATT 7 cut(s) 153, 269, 738, 990, 1008, 1078, 1176
TauI GCSGC 1 cut(s) 972
Tru1I TTAA 2 cut(s) 357, 1134
Tru9I TTAA 2 cut(s) 357, 1134
TscAI CASTG 7 cut(s) 236, 369, 574, 892, 907, 1243, 1279
TseFI GTSAC 2 cut(s) 662, 1270
TseI GCWGC 3 cut(s) 36, 204, 1232
Tsp45I GTSAC 2 cut(s) 662, 1270
TspGWI ACGGA 3 cut(s) 9, 233, 507
TspRI CASTG 7 cut(s) 236, 369, 574, 892, 907, 1243, 1279
VneI GTGCAC 1 cut(s) 915
VpaK11BI GGWCC 2 cut(s) 17, 764
XceI RCATGY 1 cut(s) 830
XhoI CTCGAG 1 cut(s) 849
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 1 cut(s) 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.