MD04G1180800.v1.1

Ethanolamine-phosphate

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
27153163 .. 27157309
4147 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1180800.v1.1.491

Sequence Viewer

Length: 1281 bp
ATGGGTTTGGAAGATGGGAACTCAGAGAACGCGCGGAGCTGGGCGAGGTTTGTAGCCACGTGTCTCGTCGGTGGGGTGGTGGTGGCGGTGGGGGTCGGCGTCGGGGTTTCTCTTCTGGGCTCAGAAGGCGGACCTCAGCTTCCTTTGGGACTTCCATGGCGGAGGAAGAAGAACAGACCCGTCCGGGTTTACATGGACGGCTGCTTCGACATGATGCACTACGGCCACTGCAACGCCCTCCGTCAGGCGCGTGCGCTCGGCGACCAATTGGTGGTCGGAGTCGTCAGTGACGCCGAAATCATCGTCAATAAAGGCCCCCCTGTGACTCCTCTCAACGAAAGGATGATTATGGTTAATGCTGTGAAATGGGTTGACGAGGTGATTCCTGATGCACCTTATGCTATAACCGAAGAGTTCATGAAGAAGCTGTTTGATGAATACAATATAGACTATATCATTCATGGGGATGACCCATGTGTGCTTCCTGATGGGACTGATGCTTATGCTCTTGCGAAGAAGGCCGGCCGCTACAAGCAGATCAAACGGACAGAAGGCGTCTCCAGCACCGACATTGTTGGGCGTATGCTTCTCTGTGTAAGGGAGAGATCTGTTAATGAGAAGCAGCATCACTCTTCCTTGCAAAGACAATTCAGCCACGGTCACAGTCAGAAGTTCGAAGATGGTGGATCTGGAAGTGGAACCCGTGTGTCTCATTTCCTACCGACATCTCGGCGAATTGTTCAGTTTTCAAACGGAAAGGGGCCTCAGTCTGACGCACGCATAGTTTATATAGATGGTGCATTTGATCTTTTCCATGCTGGACATGTGGAGATCTTAAGGAAAGCACGAGAGCTTGGGGATTTTCTTCTTGTTGGAATACACACTGATCAGACTGTCAGTGCTACTAGAGGAGCACATCGCCCAATAATGAACCTTCACGAAAGAAGCTTAAGTGTTTTGGCTTGCCGCTATGTGGATGAGGTTATAATCGGTTCTCCATGGGAAATCTCAAAAGACATGCTCACAACCTTTAACATCTCCTTAGTGGTCCACGGAACAATAGCAGAGAATAGCAACTTTGAAAAGGAAGAAGGCAATCCTTATCAAGTCCCAATCAGTTTGGGCATCTTCAAAGTTTTGGATAGCTCGCTTGATATCACCACTTCCACGATAATTAGACGGATTGTATCCAATCACGAAGCATACCAGAAACGTAACGATAAAAAGGCAGCAAGTGAGAAAAGGTATTACGAAGGCAAGGTTTATGTTTCCGGTGACTGA

Protein Analysis

427

Amino Acids

47.23

Weight (kDa)

7.25

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTP_transf_like PF01467 64 - 193 7.1e-26 Cytidylyltransferase-like
CTP_transf_like PF01467 263 - 392 6.3e-19 Cytidylyltransferase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 986
AccB7I CCANNNNNTGG 1 cut(s) 271
AccII CGCG 3 cut(s) 32, 34, 250
AciI CCGC 6 cut(s) 34, 86, 129, 160, 526, 967
AclWI GGATC 1 cut(s) 694
AcoI YGGCCR 2 cut(s) 223, 523
AcvI CACGTG 1 cut(s) 60
AcyI GRCGYC 3 cut(s) 99, 291, 555
AfiI CCNNNNNNNGG 3 cut(s) 244, 271, 973
AflII CTTAAG 2 cut(s) 835, 949
AflIII ACRYGT 2 cut(s) 59, 823
AgsI TTSAA 3 cut(s) 750, 1082, 1132
AluBI AGCT 6 cut(s) 39, 139, 427, 853, 948, 1146
AluI AGCT 6 cut(s) 39, 139, 427, 853, 948, 1146
Alw21I GWGCWC 1 cut(s) 916
Alw26I GTCTC 3 cut(s) 68, 562, 714
AlwI GGATC 1 cut(s) 694
AoxI GGCC 5 cut(s) 223, 313, 519, 523, 761
ApeKI GCWGC 3 cut(s) 201, 622, 1229
ArsI GACNNNNNNTTYG 4 cut(s) 188, 220, 288, 320
AspLEI GCGC 3 cut(s) 34, 250, 256
AspS9I GGNCC 4 cut(s) 131, 314, 761, 1048
AsuC2I CCSGG 1 cut(s) 185
AsuHPI GGTGA 2 cut(s) 391, 1150
AsuII TTCGAA 1 cut(s) 675
AvaII GGWCC 2 cut(s) 131, 1048
BanII GRGCYC 1 cut(s) 122
BauI CACGAG 1 cut(s) 846
BbrPI CACGTG 1 cut(s) 60
Bbv12I GWGCWC 1 cut(s) 916
BbvCI CCTCAGC 1 cut(s) 135
BbvI GCAGC 3 cut(s) 188, 634, 1241
BccI CCATC 4 cut(s) 8, 482, 674, 788
BceAI ACGGC 2 cut(s) 214, 238
BciVI GTATCC 1 cut(s) 1198
BclI TGATCA 1 cut(s) 886
BcnI CCSGG 1 cut(s) 185
BcoDI GTCTC 3 cut(s) 68, 562, 714
BfaI CTAG 1 cut(s) 906
BfrI CTTAAG 2 cut(s) 835, 949
BfuI GTATCC 1 cut(s) 1198
BglII AGATCT 2 cut(s) 605, 831
BisI GCNGC 5 cut(s) 202, 526, 623, 967, 1230
BlsI GCNGC 5 cut(s) 203, 527, 624, 968, 1231
Bme1390I CCNGG 1 cut(s) 185
Bme18I GGWCC 2 cut(s) 131, 1048
BmgT120I GGNCC 4 cut(s) 131, 314, 761, 1048
BmiI GGNNCC 3 cut(s) 316, 700, 762
BmrFI CCNGG 1 cut(s) 185
BmsI GCATC 5 cut(s) 204, 379, 487, 634, 1134
BpmI CTGGAG 1 cut(s) 544
Bpu10I CCTNAGC 1 cut(s) 135
Bpu14I TTCGAA 1 cut(s) 675
BpuMI CCSGG 1 cut(s) 185
BsaAI YACGTR 1 cut(s) 60
BsaHI GRCGYC 3 cut(s) 99, 291, 555
BsaJI CCNNGG 4 cut(s) 155, 655, 998, 1051
BsaWI WCCGGW 1 cut(s) 1271
Bsc4I CCNNNNNNNGG 3 cut(s) 244, 271, 973
Bse118I RCCGGY 1 cut(s) 521
BseDI CCNNGG 4 cut(s) 155, 655, 998, 1051
BseGI GGATG 3 cut(s) 348, 472, 982
BseLI CCNNNNNNNGG 3 cut(s) 244, 271, 973
BseMII CTCAG 4 cut(s) 36, 135, 149, 779
BseRI GAGGAG 2 cut(s) 318, 924
BseX3I CGGCCG 1 cut(s) 523
BseXI GCAGC 3 cut(s) 188, 634, 1241
BseYI CCCAGC 1 cut(s) 39
Bsh1236I CGCG 3 cut(s) 32, 34, 250
Bsh1285I CGRYCG 1 cut(s) 526
BshFI GGCC 5 cut(s) 225, 315, 521, 525, 763
BsiEI CGRYCG 1 cut(s) 526
BsiHKAI GWGCWC 1 cut(s) 916
BsiSI CCGG 3 cut(s) 184, 522, 1272
BslFI GGGAC 3 cut(s) 162, 505, 1094
BslI CCNNNNNNNGG 3 cut(s) 244, 271, 973
BsmAI GTCTC 3 cut(s) 68, 562, 714
BsmBI CGTCTC 1 cut(s) 562
BsmFI GGGAC 3 cut(s) 162, 505, 1094
BsnI GGCC 5 cut(s) 225, 315, 521, 525, 763
Bsp119I TTCGAA 1 cut(s) 675
Bsp1286I GDGCHC 2 cut(s) 122, 916
Bsp143I GATC 6 cut(s) 537, 605, 686, 805, 831, 886
Bsp19I CCATGG 2 cut(s) 155, 998
BspACI CCGC 6 cut(s) 34, 86, 129, 160, 526, 967
BspANI GGCC 5 cut(s) 225, 315, 521, 525, 763
BspCNI CTCAG 4 cut(s) 35, 134, 148, 778
BspFNI CGCG 3 cut(s) 32, 34, 250
BspHI TCATGA 1 cut(s) 417
BspLI GGNNCC 3 cut(s) 316, 700, 762
BspPI GGATC 1 cut(s) 694
BspT104I TTCGAA 1 cut(s) 675
BspTI CTTAAG 2 cut(s) 835, 949
BsrFI RCCGGY 1 cut(s) 521
BssAI RCCGGY 1 cut(s) 521
BssECI CCNNGG 4 cut(s) 155, 655, 998, 1051
BssMI GATC 6 cut(s) 537, 605, 686, 805, 831, 886
BssNI GRCGYC 3 cut(s) 99, 291, 555
BssSI CACGAG 1 cut(s) 846
BssT1I CCWWGG 2 cut(s) 155, 998
Bst2BI CACGAG 1 cut(s) 846
Bst4CI ACNGT 3 cut(s) 659, 665, 895
Bst6I CTCTTC 3 cut(s) 117, 405, 637
BstACI GRCGYC 3 cut(s) 99, 291, 555
BstAFI CTTAAG 2 cut(s) 835, 949
BstAPI GCANNNNNTGC 1 cut(s) 398
BstBAI YACGTR 1 cut(s) 60
BstBI TTCGAA 1 cut(s) 675
BstC8I GCNNGC 5 cut(s) 252, 523, 778, 964, 1148
BstDEI CTNAG 5 cut(s) 22, 121, 135, 765, 1042
BstDSI CCRYGG 4 cut(s) 155, 655, 998, 1051
BstENI CCTNNNNNAGG 1 cut(s) 242
BstF5I GGATG 3 cut(s) 348, 472, 982
BstFNI CGCG 3 cut(s) 32, 34, 250
BstHHI GCGC 3 cut(s) 34, 250, 256
BstKTI GATC 6 cut(s) 540, 608, 689, 808, 834, 889
BstMAI GTCTC 3 cut(s) 68, 562, 714
BstMBI GATC 6 cut(s) 537, 605, 686, 805, 831, 886
BstMCI CGRYCG 1 cut(s) 526
BstMWI GCNNNNNNNGC 4 cut(s) 126, 398, 518, 561
BstNSI RCATGY 2 cut(s) 827, 1021
BstSCI CCNGG 1 cut(s) 183
BstUI CGCG 3 cut(s) 32, 34, 250
BstV1I GCAGC 3 cut(s) 188, 634, 1241
BstX2I RGATCY 3 cut(s) 605, 686, 831
BstYI RGATCY 3 cut(s) 605, 686, 831
BstZI CGGCCG 1 cut(s) 523
BsuI GTATCC 1 cut(s) 1198
BsuRI GGCC 5 cut(s) 225, 315, 521, 525, 763
BtgI CCRYGG 4 cut(s) 155, 655, 998, 1051
BtgZI GCGATG 1 cut(s) 902
BtsCI GGATG 3 cut(s) 348, 472, 982
BtsI GCAGTG 1 cut(s) 226
BtsIMutI CAGTG 4 cut(s) 226, 292, 882, 904
Cac8I GCNNGC 5 cut(s) 252, 523, 778, 964, 1148
CciI TCATGA 1 cut(s) 417
CfoI GCGC 3 cut(s) 34, 250, 256
Cfr10I RCCGGY 1 cut(s) 521
Cfr13I GGNCC 4 cut(s) 131, 314, 761, 1048
CseI GACGC 4 cut(s) 88, 299, 544, 782
DdeI CTNAG 5 cut(s) 22, 121, 135, 765, 1042
DpnI GATC 6 cut(s) 539, 607, 688, 807, 833, 888
DpnII GATC 6 cut(s) 537, 605, 686, 805, 831, 886
EaeI YGGCCR 2 cut(s) 223, 523
EagI CGGCCG 1 cut(s) 523
Eam1104I CTCTTC 3 cut(s) 117, 405, 637
EarI CTCTTC 3 cut(s) 117, 405, 637
EciI GGCGGA 2 cut(s) 144, 175
EclXI CGGCCG 1 cut(s) 523
Eco130I CCWWGG 2 cut(s) 155, 998
Eco24I GRGCYC 1 cut(s) 122
Eco32I GATATC 1 cut(s) 1156
Eco47I GGWCC 2 cut(s) 131, 1048
Eco52I CGGCCG 1 cut(s) 523
Eco72I CACGTG 1 cut(s) 60
EcoNI CCTNNNNNAGG 1 cut(s) 242
EcoO109I RGGNCCY 2 cut(s) 314, 761
EcoRV GATATC 1 cut(s) 1156
EcoT14I CCWWGG 2 cut(s) 155, 998
EcoT38I GRGCYC 1 cut(s) 122
ErhI CCWWGG 2 cut(s) 155, 998
Esp3I CGTCTC 1 cut(s) 562
FaqI GGGAC 3 cut(s) 162, 505, 1094
FbaI TGATCA 1 cut(s) 886
Fnu4HI GCNGC 5 cut(s) 202, 526, 623, 967, 1230
FokI GGATG 3 cut(s) 355, 479, 989
FriOI GRGCYC 1 cut(s) 122
FseI GGCCGGCC 1 cut(s) 525
Fsp4HI GCNGC 5 cut(s) 202, 526, 623, 967, 1230
FspBI CTAG 1 cut(s) 906
GlaI GCGC 3 cut(s) 33, 249, 255
GluI GCNGC 5 cut(s) 202, 526, 623, 967, 1230
GsaI CCCAGC 1 cut(s) 43
GsuI CTGGAG 1 cut(s) 544
HaeIII GGCC 5 cut(s) 225, 315, 521, 525, 763
HapII CCGG 3 cut(s) 184, 522, 1272
HgaI GACGC 4 cut(s) 88, 299, 544, 782
HhaI GCGC 3 cut(s) 34, 250, 256
Hin1I GRCGYC 3 cut(s) 99, 291, 555
Hin6I GCGC 3 cut(s) 32, 248, 254
HinP1I GCGC 3 cut(s) 32, 248, 254
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HindIII AAGCTT 1 cut(s) 946
HinfI GANTC 3 cut(s) 279, 325, 382
HpaII CCGG 3 cut(s) 184, 522, 1272
HphI GGTGA 2 cut(s) 391, 1150
Hpy166II GTNNAC 3 cut(s) 190, 373, 1051
Hpy188I TCNGA 6 cut(s) 25, 124, 278, 669, 772, 891
Hpy188III TCNNGA 6 cut(s) 386, 418, 485, 690, 938, 1196
Hpy8I GTNNAC 3 cut(s) 190, 373, 1051
Hpy99I CGWCG 2 cut(s) 71, 104
HpyAV CCTTC 6 cut(s) 119, 511, 545, 944, 1085, 1247
HpyCH4III ACNGT 3 cut(s) 659, 665, 895
HpyCH4IV ACGT 2 cut(s) 59, 1213
HpyCH4V TGCA 5 cut(s) 217, 231, 392, 640, 800
HpyF10VI GCNNNNNNNGC 4 cut(s) 126, 398, 518, 561
HpyF3I CTNAG 5 cut(s) 22, 121, 135, 765, 1042
HpySE526I ACGT 2 cut(s) 59, 1213
Hsp92I GRCGYC 3 cut(s) 99, 291, 555
HspAI GCGC 3 cut(s) 32, 248, 254
KroI GCCGGC 1 cut(s) 521
KroNI GCCGGC 1 cut(s) 523
Ksp22I TGATCA 1 cut(s) 886
Kzo9I GATC 6 cut(s) 537, 605, 686, 805, 831, 886
LmnI GCTCC 2 cut(s) 36, 911
Lsp1109I GCAGC 3 cut(s) 188, 634, 1241
LweI GCATC 5 cut(s) 204, 379, 487, 634, 1134
MaeI CTAG 1 cut(s) 906
MaeII ACGT 2 cut(s) 59, 1213
MaeIII GTNAC 5 cut(s) 287, 322, 659, 1214, 1274
MalI GATC 6 cut(s) 539, 607, 688, 807, 833, 888
MboI GATC 6 cut(s) 537, 605, 686, 805, 831, 886
MfeI CAATTG 1 cut(s) 266
MflI RGATCY 3 cut(s) 605, 686, 831
MhlI GDGCHC 2 cut(s) 122, 916
MluCI AATT 4 cut(s) 266, 647, 735, 1173
MlyI GAGTC 2 cut(s) 288, 319
MmeI TCCRAC 2 cut(s) 256, 853
MnlI CCTC 9 cut(s) 39, 144, 156, 248, 339, 370, 774, 902, 973
MroNI GCCGGC 1 cut(s) 521
MseI TTAA 5 cut(s) 354, 612, 836, 950, 1032
MslI CAYNNNNRTG 1 cut(s) 465
MspCI CTTAAG 2 cut(s) 835, 949
MspI CCGG 3 cut(s) 184, 522, 1272
MspR9I CCNGG 1 cut(s) 185
MunI CAATTG 1 cut(s) 266
MvnI CGCG 3 cut(s) 32, 34, 250
MwoI GCNNNNNNNGC 4 cut(s) 126, 398, 518, 561
NaeI GCCGGC 1 cut(s) 523
NciI CCSGG 1 cut(s) 185
NcoI CCATGG 2 cut(s) 155, 998
NdeII GATC 6 cut(s) 537, 605, 686, 805, 831, 886
NgoMIV GCCGGC 1 cut(s) 521
NlaIV GGNNCC 3 cut(s) 316, 700, 762
NmeAIII GCCGAG 2 cut(s) 237, 709
NmuCI GTSAC 4 cut(s) 287, 322, 659, 1274
NspI RCATGY 2 cut(s) 827, 1021
NspV TTCGAA 1 cut(s) 675
PagI TCATGA 1 cut(s) 417
PciI ACATGT 1 cut(s) 823
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PdiI GCCGGC 1 cut(s) 523
PfeI GAWTC 1 cut(s) 382
PflMI CCANNNNNTGG 1 cut(s) 271
PkrI GCNGC 5 cut(s) 203, 527, 624, 968, 1231
PleI GAGTC 2 cut(s) 287, 319
PmaCI CACGTG 1 cut(s) 60
PmlI CACGTG 1 cut(s) 60
PpsI GAGTC 2 cut(s) 287, 319
Ppu21I YACGTR 1 cut(s) 60
PscI ACATGT 1 cut(s) 823
PsiI TTATAA 1 cut(s) 986
PspCI CACGTG 1 cut(s) 60
PspFI CCCAGC 1 cut(s) 39
PspN4I GGNNCC 3 cut(s) 316, 700, 762
PspPI GGNCC 4 cut(s) 131, 314, 761, 1048
PsuI RGATCY 3 cut(s) 605, 686, 831
RigI GGCCGGCC 1 cut(s) 525
RseI CAYNNNNRTG 1 cut(s) 465
SaqAI TTAA 5 cut(s) 354, 612, 836, 950, 1032
SatI GCNGC 5 cut(s) 202, 526, 623, 967, 1230
Sau3AI GATC 6 cut(s) 537, 605, 686, 805, 831, 886
Sau96I GGNCC 4 cut(s) 131, 314, 761, 1048
SchI GAGTC 2 cut(s) 288, 319
ScrFI CCNGG 1 cut(s) 185
SduI GDGCHC 2 cut(s) 122, 916
SfaNI GCATC 5 cut(s) 204, 379, 487, 634, 1134
SfuI TTCGAA 1 cut(s) 675
SinI GGWCC 2 cut(s) 131, 1048
SmiMI CAYNNNNRTG 1 cut(s) 465
SmlI CTYRAG 2 cut(s) 835, 949
SmoI CTYRAG 2 cut(s) 835, 949
Sse9I AATT 4 cut(s) 266, 647, 735, 1173
SsiI CCGC 6 cut(s) 34, 86, 129, 160, 526, 967
SspMI CTAG 1 cut(s) 906
StyD4I CCNGG 1 cut(s) 183
StyI CCWWGG 2 cut(s) 155, 998
TaaI ACNGT 3 cut(s) 659, 665, 895
TaiI ACGT 2 cut(s) 62, 1216
TaqI TCGA 2 cut(s) 207, 675
TasI AATT 4 cut(s) 266, 647, 735, 1173
TauI GCSGC 2 cut(s) 528, 969
TfiI GAWTC 1 cut(s) 382
Tru1I TTAA 5 cut(s) 354, 612, 836, 950, 1032
Tru9I TTAA 5 cut(s) 354, 612, 836, 950, 1032
TscAI CASTG 4 cut(s) 233, 292, 889, 904
TseFI GTSAC 4 cut(s) 287, 322, 659, 1274
TseI GCWGC 3 cut(s) 201, 622, 1229
Tsp45I GTSAC 4 cut(s) 287, 322, 659, 1274
TspDTI ATGAA 5 cut(s) 406, 434, 449, 450, 944
TspGWI ACGGA 5 cut(s) 230, 559, 768, 1068, 1195
TspRI CASTG 4 cut(s) 233, 292, 889, 904
Van91I CCANNNNNTGG 1 cut(s) 271
Vha464I CTTAAG 2 cut(s) 835, 949
VpaK11BI GGWCC 2 cut(s) 131, 1048
XagI CCTNNNNNAGG 1 cut(s) 242
XceI RCATGY 2 cut(s) 827, 1021
XspI CTAG 1 cut(s) 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.