Rh4DG077100

Ethanolamine-phosphate cytidylyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
11431726 .. 11436974
5249 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG077100.1

Sequence Viewer

Length: 1464 bp
ATGGTGGCCAAGCACGCACACACTTCAGCACCTTCGTCTCTGGGTGTACACATGAGGACGAAGCAAAGCTTTGCAAGAACCTTCGGGTTGTTTCACACACCACAAAAAGAGAAGAGAGAAGAGAGAAGAGGAGGCACAAAGCTTCTATTACACAAAGCCTTTATATTTTCAGGTTTTGTGTCTCCTCTGAGTAAGTTATTTGATAAAGTAGGCAACATGGAGTATGAGACTAACAACTGGATTTGGGATGGAGTGTATAACCACCCACATGTCTTTGGTGGTCTAATGCTCACGGCTGCCTTGCTCGGCTTGTCCACGAGCTATTTTGGTGGAATTTCGGTTCCTCAGTTGCCTTACCTATGGTCTGATTCGGGGATTTTCCATAAGAAGAAATCTGAGAAGAAGCGCATTCGGGTGTACATGGATGGGTGCTTTGATCTCATGCACTACGGTCATGCCAATGCTCTGAGGCAAGCCAAGGCTCTGGGGGATGAGTTAGTGGTTGGGGTTGTTAGTGACGAAGAGATCATTGCCAATAAAGGTCCCCCCGTTTTATCCATGGAAGAGAGACTGGCTCTCGTTAGCGGGTTGAAGTGGGTGGATGAAGTCATAGCCAGCGCTCCTTATGAAATCACTGAACAATTCATGAACAGACTCTTCAATGAGCATAGAATTGACTATATCATACATGGTGATGATCCTTGCCTGCTTCCAGATGGAACTGATGCCTATGCCTTGGCAAAGAAAGCTGGCCGCTACAAACAGATCAAACGCACTGAAGGTGTCTCCAGCACCGATATTGTAGGGAGGATACTTTCTTCTTTAAAGGAGACAAATAATACATCTTCACATGGAGACCCTTGTGAAGAAAGTCAATCCAAGAGCGCCCAATTATCTCAATTTCTGCCAACATCCCGACGAATTGTGCAATTCTCCAATGGAAAGGCTCCTGGACCAAATGCTCGTATTGTGTACATTGATGGGGCATTTGATCTCTTCCATGCTGGACATGTTGAGATTCTGAAGAATGCTAGGCAGCTTGGAGACTTTTTACTAGTTGGCATCCACAATGATCACACTGTGAGTGAACACAGAGGCAAGCATCCAATAATGCATTTACATGAACGTAGTCTTGGTGTGTTGGGTTGCCGCTATGTTGATGAGGTCATCATTGGTGCTCCTTGGGAAATTACCATGGATATGATAACAACTTTCAACATTTCATTGGTAGTGCGTGGGACAGTTTCTGAGTACAACTCCTCGTTTACTGGTGAAAGTGATCCTTATTCTGTTCCCAAGAGCATGGGGATTTTCCAAGTACTTGAAAGCCCAAAAGATATAACAACAACATCAGTATCTCAGAGGATAATTGCAAATCATGATGCTTACTTGAAACGCAACGCCAGGAAAACAGCAAGTGAAAAGAAATACTACGAACAGAAGAAATATGTTTCAGGGGACTAG

Protein Analysis

487

Amino Acids

54.46

Weight (kDa)

8.6

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTP_transf_like PF01467 140 - 269 2.7e-25 Cytidylyltransferase-like
CTP_transf_like PF01467 325 - 414 5.6e-17 Cytidylyltransferase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 585, 754, 1150
AclWI GGATC 2 cut(s) 692, 1274
AcoI YGGCCR 2 cut(s) 6, 751
AcsI RAATTY 1 cut(s) 333
AcuI CTGAAG 3 cut(s) 9, 798, 1043
AdeI CACNNNGTG 1 cut(s) 1081
AfaI GTAC 5 cut(s) 48, 419, 974, 1253, 1320
AfeI AGCGCT 1 cut(s) 619
AflIII ACRYGT 2 cut(s) 268, 1009
AgsI TTSAA 5 cut(s) 592, 661, 1216, 1325, 1393
AhlI ACTAGT 1 cut(s) 1054
AjnI CCWGG 2 cut(s) 949, 1403
AjuI GAANNNNNNNTTGG 2 cut(s) 1116, 1148
AloI GAACNNNNNNTCC 2 cut(s) 324, 356
AluBI AGCT 5 cut(s) 69, 142, 321, 749, 1039
AluI AGCT 5 cut(s) 69, 142, 321, 749, 1039
Alw21I GWGCWC 1 cut(s) 1180
Alw26I GTCTC 8 cut(s) 42, 186, 221, 562, 790, 824, 849, 1038
AlwI GGATC 2 cut(s) 692, 1274
AlwNI CAGNNNCTG 1 cut(s) 1247
Aor51HI AGCGCT 1 cut(s) 619
AoxI GGCC 2 cut(s) 6, 751
ApeKI GCWGC 2 cut(s) 296, 1036
ApoI RAATTY 1 cut(s) 333
AspLEI GCGC 3 cut(s) 408, 620, 887
AspS9I GGNCC 2 cut(s) 542, 953
AsuHPI GGTGA 2 cut(s) 704, 1283
AvaII GGWCC 2 cut(s) 542, 953
BaeI ACNNNNGTAYC 2 cut(s) 1338, 1371
BalI TGGCCA 1 cut(s) 8
BauI CACGAG 1 cut(s) 316
Bbv12I GWGCWC 1 cut(s) 1180
BbvI GCAGC 2 cut(s) 283, 1048
BccI CCATC 4 cut(s) 242, 419, 710, 974
BceAI ACGGC 1 cut(s) 309
BciT130I CCWGG 2 cut(s) 951, 1405
BciVI GTATCC 1 cut(s) 804
BclI TGATCA 1 cut(s) 1072
BcoDI GTCTC 8 cut(s) 42, 186, 221, 562, 790, 824, 849, 1038
BcuI ACTAGT 1 cut(s) 1054
BfaI CTAG 3 cut(s) 1032, 1055, 1462
BfoI RGCGCY 2 cut(s) 621, 888
BfuI GTATCC 1 cut(s) 804
BisI GCNGC 4 cut(s) 297, 754, 1037, 1150
BlsI GCNGC 4 cut(s) 298, 755, 1038, 1151
BmcAI AGTACT 1 cut(s) 1320
Bme1390I CCNGG 2 cut(s) 951, 1405
Bme18I GGWCC 2 cut(s) 542, 953
BmgT120I GGNCC 2 cut(s) 542, 953
BmiI GGNNCC 3 cut(s) 342, 544, 948
BmrFI CCNGG 2 cut(s) 951, 1405
BmsI GCATC 4 cut(s) 715, 1071, 1111, 1372
BplI GAGNNNNNCTC 4 cut(s) 559, 591, 1241, 1273
BpmI CTGGAG 1 cut(s) 772
BsaI GGTCTC 1 cut(s) 849
BsaJI CCNNGG 5 cut(s) 477, 558, 735, 1181, 1194
Bse1I ACTGG 3 cut(s) 242, 576, 1273
Bse3DI GCAATG 1 cut(s) 528
BseBI CCWGG 2 cut(s) 951, 1405
BseDI CCNNGG 5 cut(s) 477, 558, 735, 1181, 1194
BseGI GGATG 7 cut(s) 253, 430, 496, 607, 911, 1062, 1102
BseMI GCAATG 1 cut(s) 528
BseMII CTCAG 6 cut(s) 179, 359, 387, 458, 1239, 1373
BseNI ACTGG 3 cut(s) 242, 576, 1273
BseRI GAGGAG 3 cut(s) 144, 174, 1249
BseXI GCAGC 2 cut(s) 283, 1048
BshFI GGCC 2 cut(s) 8, 753
BsiHKAI GWGCWC 1 cut(s) 1180
BslFI GGGAC 2 cut(s) 528, 1252
BsmAI GTCTC 8 cut(s) 42, 186, 221, 562, 790, 824, 849, 1038
BsmBI CGTCTC 1 cut(s) 42
BsmFI GGGAC 2 cut(s) 528, 1252
BsmI GAATGC 2 cut(s) 408, 1033
BsnI GGCC 2 cut(s) 8, 753
Bso31I GGTCTC 1 cut(s) 849
Bsp1286I GDGCHC 1 cut(s) 1180
Bsp1407I TGTACA 3 cut(s) 46, 417, 972
Bsp143I GATC 7 cut(s) 436, 525, 697, 765, 991, 1072, 1279
Bsp19I CCATGG 2 cut(s) 558, 1194
BspACI CCGC 3 cut(s) 585, 754, 1150
BspANI GGCC 2 cut(s) 8, 753
BspCNI CTCAG 6 cut(s) 180, 358, 388, 459, 1240, 1372
BspHI TCATGA 2 cut(s) 645, 1378
BspLI GGNNCC 3 cut(s) 342, 544, 948
BspPI GGATC 2 cut(s) 692, 1274
BspTNI GGTCTC 1 cut(s) 849
BsrDI GCAATG 1 cut(s) 528
BsrGI TGTACA 3 cut(s) 46, 417, 972
BsrI ACTGG 3 cut(s) 242, 576, 1273
BssECI CCNNGG 5 cut(s) 477, 558, 735, 1181, 1194
BssMI GATC 7 cut(s) 436, 525, 697, 765, 991, 1072, 1279
BssSI CACGAG 1 cut(s) 316
BssT1I CCWWGG 5 cut(s) 477, 558, 735, 1181, 1194
Bst2BI CACGAG 1 cut(s) 316
Bst2UI CCWGG 2 cut(s) 951, 1405
Bst4CI ACNGT 3 cut(s) 452, 1081, 1243
Bst6I CTCTTC 7 cut(s) 107, 114, 121, 516, 558, 662, 1001
BstAUI TGTACA 3 cut(s) 46, 417, 972
BstC8I GCNNGC 6 cut(s) 15, 474, 616, 707, 751, 1100
BstDEI CTNAG 6 cut(s) 188, 345, 396, 467, 1248, 1359
BstDSI CCRYGG 2 cut(s) 558, 1194
BstF5I GGATG 7 cut(s) 253, 430, 496, 607, 911, 1062, 1102
BstH2I RGCGCY 2 cut(s) 621, 888
BstHHI GCGC 3 cut(s) 408, 620, 887
BstKTI GATC 7 cut(s) 439, 528, 700, 768, 994, 1075, 1282
BstMAI GTCTC 8 cut(s) 42, 186, 221, 562, 790, 824, 849, 1038
BstMBI GATC 7 cut(s) 436, 525, 697, 765, 991, 1072, 1279
BstMWI GCNNNNNNNGC 2 cut(s) 14, 746
BstNI CCWGG 2 cut(s) 951, 1405
BstNSI RCATGY 2 cut(s) 272, 1013
BstSCI CCNGG 2 cut(s) 949, 1403
BstV1I GCAGC 2 cut(s) 283, 1048
BstXI CCANNNNNNTGG 2 cut(s) 484, 1303
BsuI GTATCC 1 cut(s) 804
BsuRI GGCC 2 cut(s) 8, 753
BtgI CCRYGG 2 cut(s) 558, 1194
BtsCI GGATG 7 cut(s) 253, 430, 496, 607, 911, 1062, 1102
BtsIMutI CAGTG 3 cut(s) 633, 774, 1077
Cac8I GCNNGC 6 cut(s) 15, 474, 616, 707, 751, 1100
CaiI CAGNNNCTG 1 cut(s) 1247
CciI TCATGA 2 cut(s) 645, 1378
CfoI GCGC 3 cut(s) 408, 620, 887
Cfr13I GGNCC 2 cut(s) 542, 953
Csp6I GTAC 5 cut(s) 47, 418, 973, 1252, 1319
CviQI GTAC 5 cut(s) 47, 418, 973, 1252, 1319
DdeI CTNAG 6 cut(s) 188, 345, 396, 467, 1248, 1359
DpnI GATC 7 cut(s) 438, 527, 699, 767, 993, 1074, 1281
DpnII GATC 7 cut(s) 436, 525, 697, 765, 991, 1072, 1279
DraI TTTAAA 1 cut(s) 825
DraIII CACNNNGTG 1 cut(s) 1081
EaeI YGGCCR 2 cut(s) 6, 751
Eam1104I CTCTTC 7 cut(s) 107, 114, 121, 516, 558, 662, 1001
EarI CTCTTC 7 cut(s) 107, 114, 121, 516, 558, 662, 1001
Eco130I CCWWGG 5 cut(s) 477, 558, 735, 1181, 1194
Eco31I GGTCTC 1 cut(s) 849
Eco47I GGWCC 2 cut(s) 542, 953
Eco47III AGCGCT 1 cut(s) 619
Eco57I CTGAAG 3 cut(s) 9, 798, 1043
EcoO109I RGGNCCY 1 cut(s) 542
EcoRII CCWGG 2 cut(s) 949, 1403
EcoT14I CCWWGG 5 cut(s) 477, 558, 735, 1181, 1194
EcoT22I ATGCAT 1 cut(s) 1116
ErhI CCWWGG 5 cut(s) 477, 558, 735, 1181, 1194
Esp3I CGTCTC 1 cut(s) 42
FalI AAGNNNNNCTT 4 cut(s) 53, 85, 1267, 1299
FaqI GGGAC 2 cut(s) 528, 1252
FauI CCCGC 1 cut(s) 578
FbaI TGATCA 1 cut(s) 1072
Fnu4HI GCNGC 4 cut(s) 297, 754, 1037, 1150
FokI GGATG 7 cut(s) 260, 437, 503, 614, 898, 1049, 1089
Fsp4HI GCNGC 4 cut(s) 297, 754, 1037, 1150
FspBI CTAG 3 cut(s) 1032, 1055, 1462
GlaI GCGC 3 cut(s) 407, 619, 886
GluI GCNGC 4 cut(s) 297, 754, 1037, 1150
GsuI CTGGAG 1 cut(s) 772
HaeII RGCGCY 2 cut(s) 621, 888
HaeIII GGCC 2 cut(s) 8, 753
HhaI GCGC 3 cut(s) 408, 620, 887
Hin6I GCGC 3 cut(s) 406, 618, 885
HinP1I GCGC 3 cut(s) 406, 618, 885
HindIII AAGCTT 2 cut(s) 67, 140
HinfI GANTC 3 cut(s) 368, 654, 1018
HphI GGTGA 2 cut(s) 704, 1283
Hpy166II GTNNAC 7 cut(s) 47, 49, 315, 418, 973, 1088, 1266
Hpy188I TCNGA 7 cut(s) 189, 367, 397, 468, 1023, 1249, 1362
Hpy188III TCNNGA 4 cut(s) 646, 713, 915, 1379
Hpy8I GTNNAC 7 cut(s) 47, 49, 315, 418, 973, 1088, 1266
Hpy99I CGWCG 1 cut(s) 921
HpyAV CCTTC 3 cut(s) 42, 91, 773
HpyCH4III ACNGT 3 cut(s) 452, 1081, 1243
HpyCH4IV ACGT 1 cut(s) 1126
HpyCH4V TGCA 5 cut(s) 74, 445, 928, 1114, 1373
HpyF10VI GCNNNNNNNGC 2 cut(s) 14, 746
HpyF3I CTNAG 6 cut(s) 188, 345, 396, 467, 1248, 1359
HpySE526I ACGT 1 cut(s) 1126
HspAI GCGC 3 cut(s) 406, 618, 885
Ksp22I TGATCA 1 cut(s) 1072
Kzo9I GATC 7 cut(s) 436, 525, 697, 765, 991, 1072, 1279
LmnI GCTCC 3 cut(s) 625, 952, 1183
Lsp1109I GCAGC 2 cut(s) 283, 1048
LweI GCATC 4 cut(s) 715, 1071, 1111, 1372
MaeI CTAG 3 cut(s) 1032, 1055, 1462
MaeII ACGT 1 cut(s) 1126
MaeIII GTNAC 1 cut(s) 515
MalI GATC 7 cut(s) 438, 527, 699, 767, 993, 1074, 1281
MboI GATC 7 cut(s) 436, 525, 697, 765, 991, 1072, 1279
MhlI GDGCHC 1 cut(s) 1180
MlsI TGGCCA 1 cut(s) 8
MluCI AATT 9 cut(s) 333, 641, 672, 890, 899, 921, 929, 1188, 1368
MluNI TGGCCA 1 cut(s) 8
MlyI GAGTC 1 cut(s) 648
Mox20I TGGCCA 1 cut(s) 8
Mph1103I ATGCAT 1 cut(s) 1116
MscI TGGCCA 1 cut(s) 8
MseI TTAA 1 cut(s) 824
MslI CAYNNNNRTG 6 cut(s) 267, 413, 459, 693, 1119, 1199
Msp20I TGGCCA 1 cut(s) 8
MspR9I CCNGG 2 cut(s) 951, 1405
Mva1269I GAATGC 2 cut(s) 408, 1033
MvaI CCWGG 2 cut(s) 951, 1405
MwoI GCNNNNNNNGC 2 cut(s) 14, 746
NcoI CCATGG 2 cut(s) 558, 1194
NdeII GATC 7 cut(s) 436, 525, 697, 765, 991, 1072, 1279
NlaIV GGNNCC 3 cut(s) 342, 544, 948
NmeAIII GCCGAG 1 cut(s) 285
NmuCI GTSAC 1 cut(s) 515
NsiI ATGCAT 1 cut(s) 1116
NspI RCATGY 2 cut(s) 272, 1013
PagI TCATGA 2 cut(s) 645, 1378
PciI ACATGT 2 cut(s) 268, 1009
PctI GAATGC 2 cut(s) 408, 1033
PfeI GAWTC 2 cut(s) 368, 1018
PfoI TCCNGGA 1 cut(s) 949
PkrI GCNGC 4 cut(s) 298, 755, 1038, 1151
PleI GAGTC 1 cut(s) 648
PpsI GAGTC 1 cut(s) 648
PpuMI RGGWCCY 1 cut(s) 542
PscI ACATGT 2 cut(s) 268, 1009
Psp5II RGGWCCY 1 cut(s) 542
Psp6I CCWGG 2 cut(s) 949, 1403
PspGI CCWGG 2 cut(s) 949, 1403
PspN4I GGNNCC 3 cut(s) 342, 544, 948
PspPI GGNCC 2 cut(s) 542, 953
PspPPI RGGWCCY 1 cut(s) 542
PstNI CAGNNNCTG 1 cut(s) 1247
RsaI GTAC 5 cut(s) 48, 419, 974, 1253, 1320
RsaNI GTAC 5 cut(s) 47, 418, 973, 1252, 1319
RseI CAYNNNNRTG 6 cut(s) 267, 413, 459, 693, 1119, 1199
SaqAI TTAA 1 cut(s) 824
SatI GCNGC 4 cut(s) 297, 754, 1037, 1150
Sau3AI GATC 7 cut(s) 436, 525, 697, 765, 991, 1072, 1279
Sau96I GGNCC 2 cut(s) 542, 953
ScaI AGTACT 1 cut(s) 1320
SchI GAGTC 1 cut(s) 648
ScrFI CCNGG 2 cut(s) 951, 1405
SduI GDGCHC 1 cut(s) 1180
SfaNI GCATC 4 cut(s) 715, 1071, 1111, 1372
SinI GGWCC 2 cut(s) 542, 953
SmiMI CAYNNNNRTG 6 cut(s) 267, 413, 459, 693, 1119, 1199
SpeI ACTAGT 1 cut(s) 1054
Sse9I AATT 9 cut(s) 333, 641, 672, 890, 899, 921, 929, 1188, 1368
SsiI CCGC 3 cut(s) 585, 754, 1150
SspMI CTAG 3 cut(s) 1032, 1055, 1462
StyD4I CCNGG 2 cut(s) 949, 1403
StyI CCWWGG 5 cut(s) 477, 558, 735, 1181, 1194
TaaI ACNGT 3 cut(s) 452, 1081, 1243
TaiI ACGT 1 cut(s) 1129
TasI AATT 9 cut(s) 333, 641, 672, 890, 899, 921, 929, 1188, 1368
TatI WGTACW 5 cut(s) 46, 417, 972, 1251, 1318
TauI GCSGC 2 cut(s) 756, 1152
TfiI GAWTC 2 cut(s) 368, 1018
Tru1I TTAA 1 cut(s) 824
Tru9I TTAA 1 cut(s) 824
TscAI CASTG 3 cut(s) 640, 781, 1084
TseFI GTSAC 1 cut(s) 515
TseI GCWGC 2 cut(s) 296, 1036
Tsp45I GTSAC 1 cut(s) 515
TspDTI ATGAA 6 cut(s) 618, 634, 642, 662, 1137, 1212
TspRI CASTG 3 cut(s) 640, 781, 1084
VpaK11BI GGWCC 2 cut(s) 542, 953
XapI RAATTY 1 cut(s) 333
XceI RCATGY 2 cut(s) 272, 1013
XspI CTAG 3 cut(s) 1032, 1055, 1462
ZrmI AGTACT 1 cut(s) 1320
Zsp2I ATGCAT 1 cut(s) 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.