Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001332

Physical Location & Seq

Genomic Coordinates Forward (+)

631824 .. 634074

Gene Structure 2251 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G02875.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGGATTTCTCAGGGAGCTTCTTTGTCATCTTCGTTACCTTCTTCTTTCTCCCTCCTCTGTCTTCAGCTGGGAGCTACGATTCTGGTTCGGGTCTCGAGTCACTCGCTCGCGGGATGCTTCATTCAGCCAAGGATCCTGAGTTCTTCGAGTGGATGAGAGGAATTAGGAGAAAGATTCATGAGAACCCAGAGACAGGGTTTCAGGAGTTCAAAACGAGTCAACTCGTTCGAGACGAGCTTGACTCGCTTGGAGTGAAGTATAAGTATCCTGTGGCGAAGACTGGCGTCGTCGCTTGGATCGGATCCTGTTCGAAACCTGTTTTCGGACTTAGAGCCGACATGGACGCACTTCCGTTACAGGAATTAGTGGAATGGGAATCGAAAAGTAAAGTAGATGGAAAGATGCATGCTTGTGGTCATGATACTCATGTTGCTATGCTTCTTGGTGCTGCTAAGCTTCTTCAAACCACAAAACACCTCATCAAGGGGACAGTAAAACTTGTGTTTCAACCAGGCGAGGAAGGTTATGCAGGTGCTTATGAAATGCTAAAAGACGAGATTCTAGACGACTTAGATGGGATACTCAGTGTTCATGTCTTTCCATCGATCCCATCAGGTGGTATTGGTTCTAGGCCTGGGACCGTTCTTGCAGGTGCAGGATTGTTTACAGTCACGGTTCACGGTCAAGGTAGCCACGCAGCTACACCGCACTTCTCTAAAGACCCGGTTCTTGCAGCTTCTTCCGCTGTTGTTGCCTTGCAACAGATTGTTTCGCGGGAACTGGATCCACTCGAAGCTGGTGTGGTTACAGTTGGATATATTGAAGGAGGTCATGCTCAAAACGTAATACCGCAGAGTGCGAAATTTGGAGGTACTTTCAGAAGCTTAAGCAACGATGGGCTTCTATTTATCCAAAGACGGATCAAAGAGATTTCAGAGGCACAAGCATCGGTATACCGATGCAAAGCAGAAGTAAACTTCGAAGAGAAAAAGCCGTCGCTTCACCCGGTAATGAATAACGACGAGGGCTTATACGAGCACGGTAAAAAAGTAGCGGAAGCGATGATTGGAAAGAATAACTTCCATGATTTCCCGGTGACAATGGGAGGAGAGGATTTCAGCTTCTTCACTCAAAAGACTAAGGCTGCGATTTTCGTGCTGGGGGTAAAGAATGAGACGCTAGGCGCTGGTAAGCCGCTTCACTCGCCTTACTTCTTTGTTGATGAAGAAGCTCTTCCTGTTGGGGCTGCTCTTCACGCAGCTATGGCCGTTTCTTATTTGGACGAACATGGTCATAGCCATGAAGAAGAGGTTAAGAGTGAATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0008150 GO:0008152 GO:0009850 GO:0009987 GO:0010178 GO:0010210 GO:0010211 GO:0010817 GO:0012505 GO:0016787 GO:0016810 GO:0042445 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

M20_dimer Peptidase_M20

Protein Analysis

442

Amino Acids

48.01

Weight (kDa)

5.75

Isoelectric Point (pI)

33.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M20	PF01546	110 - 251	2.1e-28	Peptidase family M20/M25/M40

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02875 AT3G02875 AT3G02875
fragaria_vesca	FvH4_6g19670 FvH4_6g19670 FvH4_6g19670 FvH4_6g19670 FvH4_6g19690 FvH4_6g19700 FvH4_6g19700
malus_domestica	MD14G1032600.v1.1 MD14G1032900.v1.1 MD14G1033000.v1.1 MD14G1033100.v1.1
prunus_persica	Prupe.7G099900_v2.0.a1 Prupe.7G100000_v2.0.a1 Prupe.7G100000_v2.0.a1
pyrus_communis	pycom14g02930 pycom14g02940
rosa_chinensis	RchiOBHm_Chr3g0475011 RchiOBHm_Chr3g0475021 RchiOBHm_Chr3g0475031
rosa_laevigata	RLG00000023869 RLG00000023870 RLG00000023871
rosa_multiflora	Rmu_sc0003093.1_g000010 Rmu_sc0003093.1_g000011 Rmu_sc0003093.1_g000012 Rmu_sc0003093.1_g000017
rosa_roxburghii	Rroxscaffold_6G00406610 Rroxscaffold_6G00406620 Rroxscaffold_6G00406630
rosa_rugosa	Rorug03G0146000 Rorug03G0146100 Rorug03G0146200 Rorug03G0146300 Rorug03G0146300 Rorug03G0146300
rosa_samantha	Rh3AG195700 Rh3AG195900 Rh3AG196000 Rh3BG225900 Rh3BG226100 Rh3BG226200 Rh3CG220700 Rh3CG221000 Rh3CG221200 Rh3DG221200 Rh3DG221300 Rh3DG221400
rosa_wichuraiana	Rw3G017820 Rw3G017830 Rw3G017840 Rw3G017860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	521, 641
Acc36I	ACCTGC	2 cut(s)	521, 641
AccB7I	CCANNNNNTGG	1 cut(s)	617
AccI	GTMKAC	1 cut(s)	954
AccII	CGCG	2 cut(s)	111, 775
AciI	CCGC	7 cut(s)	111, 707, 744, 775, 851, 1055, 1196
AclWI	GGATC	9 cut(s)	128, 141, 297, 305, 310, 601, 779, 792, 929
AcoI	YGGCCR	1 cut(s)	1266
AcsI	RAATTY	1 cut(s)	863
AcuI	CTGAAG	1 cut(s)	48
AcyI	GRCGYC	1 cut(s)	285
AfaI	GTAC	1 cut(s)	874
AfiI	CCNNNNNNNGG	4 cut(s)	194, 323, 484, 617
AflII	CTTAAG	1 cut(s)	886
AgsI	TTSAA	4 cut(s)	211, 464, 509, 824
AjnI	CCWGG	2 cut(s)	511, 634
AjuI	GAANNNNNNNTTGG	2 cut(s)	1050, 1082
AloI	GAACNNNNNNTCC	2 cut(s)	125, 157
Alw21I	GWGCWC	1 cut(s)	1041
Alw26I	GTCTC	4 cut(s)	98, 185, 225, 1169
AlwI	GGATC	9 cut(s)	128, 141, 297, 305, 310, 601, 779, 792, 929
Ama87I	CYCGRG	1 cut(s)	95
AoxI	GGCC	2 cut(s)	632, 1266
ApeKI	GCWGC	6 cut(s)	449, 698, 734, 1145, 1247, 1259
ApoI	RAATTY	1 cut(s)	863
Asp700I	GAANNNNTTC	2 cut(s)	1079, 1233
AspLEI	GCGC	1 cut(s)	1187
AspS9I	GGNCC	1 cut(s)	639
AsuC2I	CCSGG	3 cut(s)	725, 1007, 1094
AsuHPI	GGTGA	2 cut(s)	995, 1108
AsuII	TTCGAA	2 cut(s)	311, 981
AvaI	CYCGRG	1 cut(s)	95
AvaII	GGWCC	1 cut(s)	639
BaeI	ACNNNNGTAYC	2 cut(s)	414, 447
BamHI	GGATCC	3 cut(s)	133, 302, 784
BbsI	GAAGAC	2 cut(s)	54, 284
Bbv12I	GWGCWC	1 cut(s)	1041
BbvI	GCAGC	6 cut(s)	436, 710, 746, 1132, 1234, 1271
BccI	CCATC	5 cut(s)	389, 569, 610, 619, 890
BceAI	ACGGC	2 cut(s)	979, 1253
BcgI	CGANNNNNNTGC	4 cut(s)	930, 964, 1138, 1172
BciT130I	CCWGG	2 cut(s)	513, 636
BciVI	GTATCC	2 cut(s)	276, 573
BcnI	CCSGG	3 cut(s)	725, 1007, 1094
BcoDI	GTCTC	4 cut(s)	98, 185, 225, 1169
BfaI	CTAG	3 cut(s)	563, 630, 1181
BfoI	RGCGCY	1 cut(s)	1188
BfrI	CTTAAG	1 cut(s)	886
BfuAI	ACCTGC	2 cut(s)	521, 641
BfuI	GTATCC	2 cut(s)	276, 573
BisI	GCNGC	7 cut(s)	450, 699, 735, 1146, 1196, 1248, 1260
BlpI	GCTNAGC	1 cut(s)	453
BlsI	GCNGC	7 cut(s)	451, 700, 736, 1147, 1197, 1249, 1261
Bme1390I	CCNGG	5 cut(s)	513, 636, 725, 1007, 1094
Bme18I	GGWCC	1 cut(s)	639
BmeT110I	CYCGRG	1 cut(s)	95
BmgT120I	GGNCC	1 cut(s)	639
BmiI	GGNNCC	4 cut(s)	135, 304, 640, 786
BmrFI	CCNGG	5 cut(s)	513, 636, 725, 1007, 1094
BmsI	GCATC	4 cut(s)	105, 393, 950, 956
BoxI	GACNNNNGTC	1 cut(s)	284
BpiI	GAAGAC	2 cut(s)	54, 284
BplI	GAGNNNNNCTC	2 cut(s)	227, 259
Bpu1102I	GCTNAGC	1 cut(s)	453
Bpu14I	TTCGAA	2 cut(s)	311, 981
BpuMI	CCSGG	3 cut(s)	725, 1007, 1094
Bsa29I	ATCGAT	1 cut(s)	605
BsaHI	GRCGYC	1 cut(s)	285
BsaI	GGTCTC	1 cut(s)	98
BsaJI	CCNNGG	2 cut(s)	129, 635
Bsc4I	CCNNNNNNNGG	4 cut(s)	194, 323, 484, 617
Bse1I	ACTGG	2 cut(s)	286, 786
BseBI	CCWGG	2 cut(s)	513, 636
BseCI	ATCGAT	1 cut(s)	605
BseDI	CCNNGG	2 cut(s)	129, 635
BseGI	GGATG	2 cut(s)	120, 159
BseLI	CCNNNNNNNGG	4 cut(s)	194, 323, 484, 617
BseMII	CTCAG	3 cut(s)	24, 129, 598
BseNI	ACTGG	2 cut(s)	286, 786
BseRI	GAGGAG	2 cut(s)	45, 1122
BseXI	GCAGC	6 cut(s)	436, 710, 746, 1132, 1234, 1271
BseYI	CCCAGC	2 cut(s)	68, 1159
BsgI	GTGCAG	1 cut(s)	675
Bsh1236I	CGCG	2 cut(s)	111, 775
BshFI	GGCC	2 cut(s)	634, 1268
BshVI	ATCGAT	1 cut(s)	605
BsiHKAI	GWGCWC	1 cut(s)	1041
BsiHKCI	CYCGRG	1 cut(s)	95
BsiSI	CCGG	3 cut(s)	725, 1007, 1094
BslFI	GGGAC	2 cut(s)	502, 652
BslI	CCNNNNNNNGG	4 cut(s)	194, 323, 484, 617
BsmAI	GTCTC	4 cut(s)	98, 185, 225, 1169
BsmBI	CGTCTC	2 cut(s)	225, 1169
BsmFI	GGGAC	2 cut(s)	502, 652
BsnI	GGCC	2 cut(s)	634, 1268
Bso31I	GGTCTC	1 cut(s)	98
BsoBI	CYCGRG	1 cut(s)	95
Bsp119I	TTCGAA	2 cut(s)	311, 981
Bsp1286I	GDGCHC	1 cut(s)	1041
Bsp143I	GATC	6 cut(s)	133, 297, 302, 606, 784, 921
Bsp1720I	GCTNAGC	1 cut(s)	453
BspACI	CCGC	7 cut(s)	111, 707, 744, 775, 851, 1055, 1196
BspANI	GGCC	2 cut(s)	634, 1268
BspCNI	CTCAG	3 cut(s)	23, 130, 597
BspDI	ATCGAT	1 cut(s)	605
BspFNI	CGCG	2 cut(s)	111, 775
BspHI	TCATGA	2 cut(s)	178, 418
BspLI	GGNNCC	4 cut(s)	135, 304, 640, 786
BspMI	ACCTGC	2 cut(s)	521, 641
BspPI	GGATC	9 cut(s)	128, 141, 297, 305, 310, 601, 779, 792, 929
BspQI	GCTCTTC	2 cut(s)	1239, 1257
BspT104I	TTCGAA	2 cut(s)	311, 981
BspTI	CTTAAG	1 cut(s)	886
BspTNI	GGTCTC	1 cut(s)	98
BsrI	ACTGG	2 cut(s)	286, 786
BssECI	CCNNGG	2 cut(s)	129, 635
BssMI	GATC	6 cut(s)	133, 297, 302, 606, 784, 921
BssNAI	GTATAC	1 cut(s)	955
BssNI	GRCGYC	1 cut(s)	285
BssT1I	CCWWGG	1 cut(s)	129
Bst1107I	GTATAC	1 cut(s)	955
Bst2UI	CCWGG	2 cut(s)	513, 636
Bst4CI	ACNGT	7 cut(s)	493, 643, 670, 676, 683, 811, 1043
Bst6I	CTCTTC	4 cut(s)	978, 1239, 1257, 1302
BstACI	GRCGYC	1 cut(s)	285
BstAFI	CTTAAG	1 cut(s)	886
BstBI	TTCGAA	2 cut(s)	311, 981
BstC8I	GCNNGC	2 cut(s)	109, 408
BstDEI	CTNAG	7 cut(s)	10, 138, 329, 453, 571, 584, 1140
BstENI	CCTNNNNNAGG	1 cut(s)	482
BstF5I	GGATG	2 cut(s)	120, 159
BstFNI	CGCG	2 cut(s)	111, 775
BstH2I	RGCGCY	1 cut(s)	1188
BstHHI	GCGC	1 cut(s)	1187
BstKTI	GATC	6 cut(s)	136, 300, 305, 609, 787, 924
BstMAI	GTCTC	4 cut(s)	98, 185, 225, 1169
BstMBI	GATC	6 cut(s)	133, 297, 302, 606, 784, 921
BstMWI	GCNNNNNNNGC	6 cut(s)	244, 743, 752, 1204, 1256, 1265
BstNI	CCWGG	2 cut(s)	513, 636
BstNSI	RCATGY	1 cut(s)	410
BstPAI	GACNNNNGTC	1 cut(s)	284
BstSCI	CCNGG	5 cut(s)	511, 634, 723, 1005, 1092
BstUI	CGCG	2 cut(s)	111, 775
BstV1I	GCAGC	6 cut(s)	436, 710, 746, 1132, 1234, 1271
BstV2I	GAAGAC	2 cut(s)	54, 284
BstX2I	RGATCY	3 cut(s)	133, 302, 784
BstYI	RGATCY	3 cut(s)	133, 302, 784
BstZ17I	GTATAC	1 cut(s)	955
Bsu15I	ATCGAT	1 cut(s)	605
BsuI	GTATCC	2 cut(s)	276, 573
BsuRI	GGCC	2 cut(s)	634, 1268
BsuTUI	ATCGAT	1 cut(s)	605
BtgZI	GCGATG	1 cut(s)	1076
BtsCI	GGATG	2 cut(s)	120, 159
BtsIMutI	CAGTG	1 cut(s)	592
BveI	ACCTGC	2 cut(s)	521, 641
Cac8I	GCNNGC	2 cut(s)	109, 408
CciI	TCATGA	2 cut(s)	178, 418
CfoI	GCGC	1 cut(s)	1187
Cfr13I	GGNCC	1 cut(s)	639
ClaI	ATCGAT	1 cut(s)	605
CseI	GACGC	3 cut(s)	274, 353, 1186
Csp6I	GTAC	1 cut(s)	873
CviQI	GTAC	1 cut(s)	873
DdeI	CTNAG	7 cut(s)	10, 138, 329, 453, 571, 584, 1140
DpnI	GATC	6 cut(s)	135, 299, 304, 608, 786, 923
DpnII	GATC	6 cut(s)	133, 297, 302, 606, 784, 921
EaeI	YGGCCR	1 cut(s)	1266
Eam1104I	CTCTTC	4 cut(s)	978, 1239, 1257, 1302
EarI	CTCTTC	4 cut(s)	978, 1239, 1257, 1302
Eco130I	CCWWGG	1 cut(s)	129
Eco147I	AGGCCT	1 cut(s)	634
Eco31I	GGTCTC	1 cut(s)	98
Eco47I	GGWCC	1 cut(s)	639
Eco57I	CTGAAG	1 cut(s)	48
Eco88I	CYCGRG	1 cut(s)	95
EcoNI	CCTNNNNNAGG	1 cut(s)	482
EcoRII	CCWGG	2 cut(s)	511, 634
EcoT14I	CCWWGG	1 cut(s)	129
EcoT22I	ATGCAT	1 cut(s)	408
ErhI	CCWWGG	1 cut(s)	129
Esp3I	CGTCTC	2 cut(s)	225, 1169
FalI	AAGNNNNNCTT	4 cut(s)	1064, 1096, 1218, 1250
FaqI	GGGAC	2 cut(s)	502, 652
FauI	CCCGC	2 cut(s)	104, 768
FblI	GTMKAC	1 cut(s)	954
Fnu4HI	GCNGC	7 cut(s)	450, 699, 735, 1146, 1196, 1248, 1260
FokI	GGATG	2 cut(s)	127, 166
Fsp4HI	GCNGC	7 cut(s)	450, 699, 735, 1146, 1196, 1248, 1260
FspBI	CTAG	3 cut(s)	563, 630, 1181
GlaI	GCGC	1 cut(s)	1186
GluI	GCNGC	7 cut(s)	450, 699, 735, 1146, 1196, 1248, 1260
GsaI	CCCAGC	2 cut(s)	72, 1163
HaeII	RGCGCY	1 cut(s)	1188
HaeIII	GGCC	2 cut(s)	634, 1268
HapII	CCGG	3 cut(s)	725, 1007, 1094
HgaI	GACGC	3 cut(s)	274, 353, 1186
HhaI	GCGC	1 cut(s)	1187
Hin1I	GRCGYC	1 cut(s)	285
Hin6I	GCGC	1 cut(s)	1185
HinP1I	GCGC	1 cut(s)	1185
HincII	GTYRAC	1 cut(s)	221
HindII	GTYRAC	1 cut(s)	221
HindIII	AAGCTT	2 cut(s)	455, 883
HinfI	GANTC	7 cut(s)	80, 98, 175, 217, 242, 377, 559
HpaII	CCGG	3 cut(s)	725, 1007, 1094
HphI	GGTGA	2 cut(s)	995, 1108
Hpy166II	GTNNAC	5 cut(s)	221, 666, 679, 955, 976
Hpy188I	TCNGA	4 cut(s)	302, 326, 881, 937
Hpy188III	TCNNGA	7 cut(s)	95, 137, 179, 203, 230, 419, 563
Hpy8I	GTNNAC	5 cut(s)	221, 666, 679, 955, 976
Hpy99I	CGWCG	4 cut(s)	290, 293, 1000, 1025
HpyAV	CCTTC	3 cut(s)	49, 515, 818
HpyCH4III	ACNGT	7 cut(s)	493, 643, 670, 676, 683, 811, 1043
HpyCH4IV	ACGT	1 cut(s)	843
HpyCH4V	TGCA	7 cut(s)	406, 530, 650, 656, 734, 760, 963
HpyF10VI	GCNNNNNNNGC	6 cut(s)	244, 743, 752, 1204, 1256, 1265
HpyF3I	CTNAG	7 cut(s)	10, 138, 329, 453, 571, 584, 1140
HpySE526I	ACGT	1 cut(s)	843
Hsp92I	GRCGYC	1 cut(s)	285
HspAI	GCGC	1 cut(s)	1185
Kzo9I	GATC	6 cut(s)	133, 297, 302, 606, 784, 921
LguI	GCTCTTC	2 cut(s)	1239, 1257
LmnI	GCTCC	2 cut(s)	15, 72
Lsp1109I	GCAGC	6 cut(s)	436, 710, 746, 1132, 1234, 1271
LweI	GCATC	4 cut(s)	105, 393, 950, 956
MaeI	CTAG	3 cut(s)	563, 630, 1181
MaeII	ACGT	1 cut(s)	843
MaeIII	GTNAC	6 cut(s)	34, 99, 354, 670, 805, 1096
MalI	GATC	6 cut(s)	135, 299, 304, 608, 786, 923
MboI	GATC	6 cut(s)	133, 297, 302, 606, 784, 921
MflI	RGATCY	3 cut(s)	133, 302, 784
MhlI	GDGCHC	1 cut(s)	1041
MluCI	AATT	4 cut(s)	162, 362, 863, 1322
MlyI	GAGTC	3 cut(s)	107, 226, 236
MmeI	TCCRAC	1 cut(s)	793
Mph1103I	ATGCAT	1 cut(s)	408
MroXI	GAANNNNTTC	2 cut(s)	1079, 1233
MseI	TTAA	2 cut(s)	887, 1314
MslI	CAYNNNNRTG	2 cut(s)	411, 1299
MspA1I	CMGCKG	2 cut(s)	68, 746
MspCI	CTTAAG	1 cut(s)	886
MspI	CCGG	3 cut(s)	725, 1007, 1094
MspR9I	CCNGG	5 cut(s)	513, 636, 725, 1007, 1094
MvaI	CCWGG	2 cut(s)	513, 636
MvnI	CGCG	2 cut(s)	111, 775
MwoI	GCNNNNNNNGC	6 cut(s)	244, 743, 752, 1204, 1256, 1265
NciI	CCSGG	3 cut(s)	725, 1007, 1094
NdeII	GATC	6 cut(s)	133, 297, 302, 606, 784, 921
NlaIV	GGNNCC	4 cut(s)	135, 304, 640, 786
NmuCI	GTSAC	3 cut(s)	99, 670, 1096
NsiI	ATGCAT	1 cut(s)	408
NspI	RCATGY	1 cut(s)	410
NspV	TTCGAA	2 cut(s)	311, 981
PaeI	GCATGC	1 cut(s)	410
PaeR7I	CTCGAG	1 cut(s)	95
PagI	TCATGA	2 cut(s)	178, 418
PaqCI	CACCTGC	2 cut(s)	521, 641
PceI	AGGCCT	1 cut(s)	634
PciSI	GCTCTTC	2 cut(s)	1239, 1257
PcsI	WCGNNNNNNNCGW	1 cut(s)	231
PdmI	GAANNNNTTC	2 cut(s)	1079, 1233
PfeI	GAWTC	4 cut(s)	80, 175, 377, 559
PflMI	CCANNNNNTGG	1 cut(s)	617
PkrI	GCNGC	7 cut(s)	451, 700, 736, 1147, 1197, 1249, 1261
PleI	GAGTC	3 cut(s)	106, 225, 236
PpsI	GAGTC	3 cut(s)	106, 225, 236
PshAI	GACNNNNGTC	1 cut(s)	284
Psp6I	CCWGG	2 cut(s)	511, 634
PspFI	CCCAGC	2 cut(s)	68, 1159
PspGI	CCWGG	2 cut(s)	511, 634
PspN4I	GGNNCC	4 cut(s)	135, 304, 640, 786
PspPI	GGNCC	1 cut(s)	639
PsuI	RGATCY	3 cut(s)	133, 302, 784
PvuII	CAGCTG	1 cut(s)	68
RsaI	GTAC	1 cut(s)	874
RsaNI	GTAC	1 cut(s)	873
RseI	CAYNNNNRTG	2 cut(s)	411, 1299
SapI	GCTCTTC	2 cut(s)	1239, 1257
SaqAI	TTAA	2 cut(s)	887, 1314
SatI	GCNGC	7 cut(s)	450, 699, 735, 1146, 1196, 1248, 1260
Sau3AI	GATC	6 cut(s)	133, 297, 302, 606, 784, 921
Sau96I	GGNCC	1 cut(s)	639
SchI	GAGTC	3 cut(s)	107, 226, 236
ScrFI	CCNGG	5 cut(s)	513, 636, 725, 1007, 1094
SduI	GDGCHC	1 cut(s)	1041
SfaNI	GCATC	4 cut(s)	105, 393, 950, 956
Sfr274I	CTCGAG	1 cut(s)	95
SfuI	TTCGAA	2 cut(s)	311, 981
SinI	GGWCC	1 cut(s)	639
SlaI	CTCGAG	1 cut(s)	95
SmiMI	CAYNNNNRTG	2 cut(s)	411, 1299
SmlI	CTYRAG	2 cut(s)	95, 886
SmoI	CTYRAG	2 cut(s)	95, 886
SphI	GCATGC	1 cut(s)	410
Sse9I	AATT	4 cut(s)	162, 362, 863, 1322
SseBI	AGGCCT	1 cut(s)	634
SsiI	CCGC	7 cut(s)	111, 707, 744, 775, 851, 1055, 1196
SspMI	CTAG	3 cut(s)	563, 630, 1181
StuI	AGGCCT	1 cut(s)	634
StyD4I	CCNGG	5 cut(s)	511, 634, 723, 1005, 1092
StyI	CCWWGG	1 cut(s)	129
TaaI	ACNGT	7 cut(s)	493, 643, 670, 676, 683, 811, 1043
TaiI	ACGT	1 cut(s)	846
TaqI	TCGA	8 cut(s)	96, 147, 229, 311, 380, 605, 792, 981
TasI	AATT	4 cut(s)	162, 362, 863, 1322
TauI	GCSGC	1 cut(s)	1198
TfiI	GAWTC	4 cut(s)	80, 175, 377, 559
Tru1I	TTAA	2 cut(s)	887, 1314
Tru9I	TTAA	2 cut(s)	887, 1314
TscAI	CASTG	1 cut(s)	592
TseFI	GTSAC	3 cut(s)	99, 670, 1096
TseI	GCWGC	6 cut(s)	449, 698, 734, 1145, 1247, 1259
Tsp45I	GTSAC	3 cut(s)	99, 670, 1096
TspDTI	ATGAA	7 cut(s)	110, 167, 555, 581, 1028, 1239, 1317
TspGWI	ACGGA	2 cut(s)	342, 934
TspRI	CASTG	1 cut(s)	592
Van91I	CCANNNNNTGG	1 cut(s)	617
Vha464I	CTTAAG	1 cut(s)	886
VpaK11BI	GGWCC	1 cut(s)	639
XagI	CCTNNNNNAGG	1 cut(s)	482
XapI	RAATTY	1 cut(s)	863
XbaI	TCTAGA	1 cut(s)	562
XceI	RCATGY	1 cut(s)	410
XhoI	CTCGAG	1 cut(s)	95
XmiI	GTMKAC	1 cut(s)	954
XmnI	GAANNNNTTC	2 cut(s)	1079, 1233
XspI	CTAG	3 cut(s)	563, 630, 1181
Zsp2I	ATGCAT	1 cut(s)	408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.