MD14G1033100.v1.1

Iaa-amino acid hydrolase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
2947357 .. 2950167
2811 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1033100.v1.1.491

Sequence Viewer

Length: 1269 bp
ATGCTTTTGTGCTTATTAATGCAAACTATTTTGGGCCAATCATGGGCTTCGGAAACCAGTGAGACAGAGCTCGAGTTGCTGACTCGGGAGCTATTGGCATCGGCGAAGGAGGCCGAGTTCTTTGAGTGGATGAGGGGAGTGAGGAGGAGAATCCACCAGTACCCAGAGATTGGGTTCGAGGAGCACAGGACAAGTCAGCTCATCAGGACGGAGCTCGACACGCTAGGAATTGAGTACACGTGGCCTGTTGCCAAGACTGGTGTGGTGGCTTCCATTGGTTCTGGCTCCAAACCAGTGTTTGCTCTCAGGGCTGACATGGACGCCCTCCCTCTTCAGGAACAAGTAGAGTGGGAGTTCAAGAGCAAGATAGAGGGCAAAATGCACGCATGTGGTCACGATTCTCATGTGGCAATGTTGCTTGGCGCAGTCAAGTTACTCCAAAGTAAAAGAGACATTCTAAAGAAGAGGTTTATGCCGGAGCTTACCATATGTTACAACATGGCATTCTTAACGACATTGATGCCATTTTCTTTATACATGTTATGCCATCACTACCAACTACCAACTGGTGTCATTGCTTCACGGCCAGGTCCAATGCTAGCCGGTTCTGGCCTTTTTTCAGCAACAGTCAAAGGAAAAGGTGGGCATGCAGCTGCTCCACATAAGAATAAGGACTCGATTCTTGCAGCAGCATCAGCTGTTGTGGCTCTTCAGCAGATTGTTTCAAGAGAGACAAATCCTCTTGAGGCCGGGGTGGTGACCGTTGGGTACTTAAAGGGAGGTGAAGCAGGAAATGTGATCCCTGATTCTGTGAACTTTGGGGGAACTTTCAGGAGCTTGACAATGGAAGGACTCAGCCATATCCAAGAAAGGATCAAAGAGGTCATAGAACTGCAATCAGCCGTGCATCGATGTGAGGGCACGGTGGACTTTATGGAGGAAACACCGCTGCCTTATCCAGTGATGATTAACAATGAAGCATTGTATGAGCATGCAAAGAAGGTAGGTGAGGCCCTACTCGGGGAACCTAATGTGGAGCTTCACCCATTGATCATGGGAACAGAGGATTTCAGCTTCTACTCGCATAAGTTTGCGGCTGCAATTTTCTTTCTCGGGATAAAGAATGAAAGTCTAAAATCGGACCAGCCATTACACTCGTCTCTATTTGTCATCGACGAACAGGCTTCTTCTGTAGGAGCTGCTCTCAATGCTGCTGTTGCAATATCTTACTTGGATACCCATGATGTTGGGAACTTATTAAAAAGTTGA

Protein Analysis

423

Amino Acids

46.36

Weight (kDa)

5.75

Isoelectric Point (pI)

44.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M20 PF01546 101 - 150 1.5e-14 Peptidase family M20/M25/M40
M20_dimer PF07687 202 - 297 3.1e-11 Peptidase dimerisation domain
Peptidase_M20 PF01546 256 - 376 1.2e-06 Peptidase family M20/M25/M40
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 170
AciI CCGC 2 cut(s) 947, 1094
AclWI GGATC 2 cut(s) 793, 881
AcoI YGGCCR 1 cut(s) 584
AcuI CTGAAG 2 cut(s) 317, 695
AcvI CACGTG 1 cut(s) 240
AcyI GRCGYC 1 cut(s) 321
AfaI GTAC 3 cut(s) 161, 236, 770
AfiI CCNNNNNNNGG 5 cut(s) 43, 170, 334, 1020, 1021
AflIII ACRYGT 2 cut(s) 237, 537
AgsI TTSAA 2 cut(s) 358, 726
AjnI CCWGG 1 cut(s) 586
AleI CACNNNNGTG 1 cut(s) 387
AloI GAACNNNNNNTCC 2 cut(s) 101, 133
Alw21I GWGCWC 3 cut(s) 72, 186, 216
Alw26I GTCTC 4 cut(s) 56, 444, 725, 1164
AlwI GGATC 2 cut(s) 793, 881
Ama87I CYCGRG 4 cut(s) 71, 84, 1019, 1112
AoxI GGCC 7 cut(s) 34, 111, 242, 584, 610, 747, 1011
ApeKI GCWGC 8 cut(s) 650, 653, 686, 689, 949, 1097, 1199, 1211
AseI ATTAAT 1 cut(s) 17
AspLEI GCGC 1 cut(s) 425
AspS9I GGNCC 4 cut(s) 34, 590, 1012, 1141
AsuC2I CCSGG 1 cut(s) 751
AsuHPI GGTGA 4 cut(s) 769, 794, 1019, 1034
AsuNHI GCTAGC 1 cut(s) 598
AvaI CYCGRG 4 cut(s) 71, 84, 1019, 1112
AvaII GGWCC 2 cut(s) 590, 1141
BaeGI GKGCMC 1 cut(s) 923
BanII GRGCYC 2 cut(s) 72, 216
BbrPI CACGTG 1 cut(s) 240
Bbv12I GWGCWC 3 cut(s) 72, 186, 216
BbvI GCAGC 8 cut(s) 640, 662, 698, 701, 936, 1084, 1186, 1198
BccI CCATC 1 cut(s) 555
BceAI ACGGC 2 cut(s) 599, 887
BcgI CGANNNNNNTGC 2 cut(s) 502, 536
BciT130I CCWGG 1 cut(s) 588
BciVI GTATCC 1 cut(s) 1228
BclI TGATCA 1 cut(s) 1050
BcnI CCSGG 1 cut(s) 751
BcoDI GTCTC 4 cut(s) 56, 444, 725, 1164
BfaI CTAG 2 cut(s) 224, 599
BfmI CTRYAG 1 cut(s) 1191
BfuI GTATCC 1 cut(s) 1228
BisI GCNGC 9 cut(s) 651, 654, 687, 690, 950, 1095, 1098, 1200, 1212
BlsI GCNGC 9 cut(s) 652, 655, 688, 691, 951, 1096, 1099, 1201, 1213
Bme1390I CCNGG 2 cut(s) 588, 751
Bme18I GGWCC 2 cut(s) 590, 1141
BmeT110I CYCGRG 4 cut(s) 71, 84, 1019, 1112
BmgT120I GGNCC 4 cut(s) 34, 590, 1012, 1141
BmiI GGNNCC 2 cut(s) 286, 1026
BmrFI CCNGG 2 cut(s) 588, 751
BmsI GCATC 4 cut(s) 107, 510, 701, 916
BmtI GCTAGC 1 cut(s) 602
BplI GAGNNNNNCTC 2 cut(s) 1188, 1220
BpuEI CTTGAG 1 cut(s) 764
BpuMI CCSGG 1 cut(s) 751
Bsa29I ATCGAT 1 cut(s) 910
BsaAI YACGTR 1 cut(s) 240
BsaHI GRCGYC 1 cut(s) 321
BsaJI CCNNGG 1 cut(s) 750
BsaXI ACNNNNNCTCC 2 cut(s) 101, 131
Bsc4I CCNNNNNNNGG 5 cut(s) 43, 170, 334, 1020, 1021
Bse118I RCCGGY 1 cut(s) 602
Bse1I ACTGG 6 cut(s) 57, 157, 262, 293, 571, 959
Bse3DI GCAATG 2 cut(s) 417, 573
BseBI CCWGG 1 cut(s) 588
BseCI ATCGAT 1 cut(s) 910
BseDI CCNNGG 1 cut(s) 750
BseGI GGATG 1 cut(s) 135
BseLI CCNNNNNNNGG 5 cut(s) 43, 170, 334, 1020, 1021
BseMI GCAATG 2 cut(s) 417, 573
BseMII CTCAG 2 cut(s) 319, 868
BseNI ACTGG 6 cut(s) 57, 157, 262, 293, 571, 959
BseRI GAGGAG 3 cut(s) 157, 160, 194
BseSI GKGCMC 1 cut(s) 923
BseXI GCAGC 8 cut(s) 640, 662, 698, 701, 936, 1084, 1186, 1198
BshFI GGCC 7 cut(s) 36, 113, 244, 586, 612, 749, 1013
BshVI ATCGAT 1 cut(s) 910
BsiHKAI GWGCWC 3 cut(s) 72, 186, 216
BsiHKCI CYCGRG 4 cut(s) 71, 84, 1019, 1112
BsiSI CCGG 3 cut(s) 476, 603, 750
BslI CCNNNNNNNGG 5 cut(s) 43, 170, 334, 1020, 1021
BsmAI GTCTC 4 cut(s) 56, 444, 725, 1164
BsmBI CGTCTC 1 cut(s) 1164
BsmI GAATGC 1 cut(s) 503
BsnI GGCC 7 cut(s) 36, 113, 244, 586, 612, 749, 1013
BsoBI CYCGRG 4 cut(s) 71, 84, 1019, 1112
Bsp1286I GDGCHC 4 cut(s) 72, 186, 216, 923
Bsp143I GATC 3 cut(s) 798, 873, 1050
BspACI CCGC 2 cut(s) 947, 1094
BspANI GGCC 7 cut(s) 36, 113, 244, 586, 612, 749, 1013
BspCNI CTCAG 2 cut(s) 318, 867
BspDI ATCGAT 1 cut(s) 910
BspLI GGNNCC 2 cut(s) 286, 1026
BspOI GCTAGC 1 cut(s) 602
BspPI GGATC 2 cut(s) 793, 881
BspQI GCTCTTC 1 cut(s) 714
BsrDI GCAATG 2 cut(s) 417, 573
BsrFI RCCGGY 1 cut(s) 602
BsrI ACTGG 6 cut(s) 57, 157, 262, 293, 571, 959
BssAI RCCGGY 1 cut(s) 602
BssECI CCNNGG 1 cut(s) 750
BssMI GATC 3 cut(s) 798, 873, 1050
BssNI GRCGYC 1 cut(s) 321
Bst2UI CCWGG 1 cut(s) 588
Bst4CI ACNGT 3 cut(s) 628, 763, 925
Bst6I CTCTTC 3 cut(s) 336, 458, 714
BstACI GRCGYC 1 cut(s) 321
BstBAI YACGTR 1 cut(s) 240
BstC8I GCNNGC 4 cut(s) 384, 600, 648, 993
BstDEI CTNAG 2 cut(s) 305, 854
BstEII GGTNACC 1 cut(s) 757
BstF5I GGATG 1 cut(s) 135
BstHHI GCGC 1 cut(s) 425
BstKTI GATC 3 cut(s) 801, 876, 1053
BstMAI GTCTC 4 cut(s) 56, 444, 725, 1164
BstMBI GATC 3 cut(s) 798, 873, 1050
BstMWI GCNNNNNNNGC 8 cut(s) 76, 110, 220, 308, 695, 704, 1208, 1217
BstNI CCWGG 1 cut(s) 588
BstNSI RCATGY 4 cut(s) 390, 541, 650, 995
BstPI GGTNACC 1 cut(s) 757
BstSCI CCNGG 2 cut(s) 586, 749
BstSFI CTRYAG 1 cut(s) 1191
BstSLI GKGCMC 1 cut(s) 923
BstV1I GCAGC 8 cut(s) 640, 662, 698, 701, 936, 1084, 1186, 1198
BstXI CCANNNNNNTGG 1 cut(s) 1247
Bsu15I ATCGAT 1 cut(s) 910
BsuI GTATCC 1 cut(s) 1228
BsuRI GGCC 7 cut(s) 36, 113, 244, 586, 612, 749, 1013
BsuTUI ATCGAT 1 cut(s) 910
BtsCI GGATG 1 cut(s) 135
BtsIMutI CAGTG 3 cut(s) 64, 300, 966
Cac8I GCNNGC 4 cut(s) 384, 600, 648, 993
CfoI GCGC 1 cut(s) 425
Cfr10I RCCGGY 1 cut(s) 602
Cfr13I GGNCC 4 cut(s) 34, 590, 1012, 1141
ClaI ATCGAT 1 cut(s) 910
CseI GACGC 1 cut(s) 329
Csp6I GTAC 3 cut(s) 160, 235, 769
CspCI CAANNNNNGTGG 2 cut(s) 329, 364
CviQI GTAC 3 cut(s) 160, 235, 769
DdeI CTNAG 2 cut(s) 305, 854
DpnI GATC 3 cut(s) 800, 875, 1052
DpnII GATC 3 cut(s) 798, 873, 1050
EaeI YGGCCR 1 cut(s) 584
Eam1104I CTCTTC 3 cut(s) 336, 458, 714
EarI CTCTTC 3 cut(s) 336, 458, 714
Ecl136II GAGCTC 2 cut(s) 70, 214
Eco24I GRGCYC 2 cut(s) 72, 216
Eco47I GGWCC 2 cut(s) 590, 1141
Eco53kI GAGCTC 2 cut(s) 70, 214
Eco57I CTGAAG 2 cut(s) 317, 695
Eco72I CACGTG 1 cut(s) 240
Eco88I CYCGRG 4 cut(s) 71, 84, 1019, 1112
Eco91I GGTNACC 1 cut(s) 757
EcoICRI GAGCTC 2 cut(s) 70, 214
EcoO109I RGGNCCY 1 cut(s) 1012
EcoO65I GGTNACC 1 cut(s) 757
EcoRII CCWGG 1 cut(s) 586
EcoT38I GRGCYC 2 cut(s) 72, 216
Esp3I CGTCTC 1 cut(s) 1164
FauNDI CATATG 1 cut(s) 488
FbaI TGATCA 1 cut(s) 1050
Fnu4HI GCNGC 9 cut(s) 651, 654, 687, 690, 950, 1095, 1098, 1200, 1212
FokI GGATG 1 cut(s) 142
FriOI GRGCYC 2 cut(s) 72, 216
Fsp4HI GCNGC 9 cut(s) 651, 654, 687, 690, 950, 1095, 1098, 1200, 1212
FspBI CTAG 2 cut(s) 224, 599
GlaI GCGC 1 cut(s) 424
GluI GCNGC 9 cut(s) 651, 654, 687, 690, 950, 1095, 1098, 1200, 1212
HaeIII GGCC 7 cut(s) 36, 113, 244, 586, 612, 749, 1013
HapII CCGG 3 cut(s) 476, 603, 750
HgaI GACGC 1 cut(s) 329
HhaI GCGC 1 cut(s) 425
Hin1I GRCGYC 1 cut(s) 321
Hin6I GCGC 1 cut(s) 423
HinP1I GCGC 1 cut(s) 423
HinfI GANTC 7 cut(s) 82, 150, 398, 674, 679, 806, 852
HpaII CCGG 3 cut(s) 476, 603, 750
HphI GGTGA 4 cut(s) 769, 794, 1019, 1034
Hpy166II GTNNAC 3 cut(s) 237, 814, 928
Hpy188I TCNGA 2 cut(s) 52, 1141
Hpy188III TCNNGA 9 cut(s) 86, 205, 335, 358, 395, 726, 743, 832, 1114
Hpy8I GTNNAC 3 cut(s) 237, 814, 928
Hpy99I CGWCG 1 cut(s) 1178
HpyAV CCTTC 3 cut(s) 100, 842, 994
HpyCH4III ACNGT 3 cut(s) 628, 763, 925
HpyCH4IV ACGT 1 cut(s) 239
HpyCH4V TGCA 9 cut(s) 22, 382, 650, 686, 895, 907, 995, 1100, 1220
HpyF10VI GCNNNNNNNGC 8 cut(s) 76, 110, 220, 308, 695, 704, 1208, 1217
HpyF3I CTNAG 2 cut(s) 305, 854
HpySE526I ACGT 1 cut(s) 239
Hsp92I GRCGYC 1 cut(s) 321
HspAI GCGC 1 cut(s) 423
Ksp22I TGATCA 1 cut(s) 1050
Kzo9I GATC 3 cut(s) 798, 873, 1050
LguI GCTCTTC 1 cut(s) 714
LmnI GCTCC 9 cut(s) 88, 181, 211, 290, 478, 661, 834, 1036, 1196
Lsp1109I GCAGC 8 cut(s) 640, 662, 698, 701, 936, 1084, 1186, 1198
LweI GCATC 4 cut(s) 107, 510, 701, 916
MaeI CTAG 2 cut(s) 224, 599
MaeII ACGT 1 cut(s) 239
MaeIII GTNAC 4 cut(s) 392, 432, 491, 757
MalI GATC 3 cut(s) 800, 875, 1052
MboI GATC 3 cut(s) 798, 873, 1050
MboII GAAGA 4 cut(s) 323, 475, 701, 1179
MhlI GDGCHC 4 cut(s) 72, 186, 216, 923
MluCI AATT 2 cut(s) 228, 1101
MlyI GAGTC 3 cut(s) 76, 668, 846
MseI TTAA 5 cut(s) 17, 509, 773, 969, 1259
MslI CAYNNNNRTG 2 cut(s) 387, 912
MspA1I CMGCKG 3 cut(s) 653, 698, 949
MspI CCGG 3 cut(s) 476, 603, 750
MspR9I CCNGG 2 cut(s) 588, 751
Mva1269I GAATGC 1 cut(s) 503
MvaI CCWGG 1 cut(s) 588
MwoI GCNNNNNNNGC 8 cut(s) 76, 110, 220, 308, 695, 704, 1208, 1217
NciI CCSGG 1 cut(s) 751
NdeI CATATG 1 cut(s) 488
NdeII GATC 3 cut(s) 798, 873, 1050
NheI GCTAGC 1 cut(s) 598
NlaIV GGNNCC 2 cut(s) 286, 1026
NmeAIII GCCGAG 1 cut(s) 139
NmuCI GTSAC 2 cut(s) 392, 757
NspI RCATGY 4 cut(s) 390, 541, 650, 995
OliI CACNNNNGTG 1 cut(s) 387
PaeI GCATGC 2 cut(s) 650, 995
PaeR7I CTCGAG 1 cut(s) 71
PciI ACATGT 1 cut(s) 537
PciSI GCTCTTC 1 cut(s) 714
PctI GAATGC 1 cut(s) 503
PfeI GAWTC 4 cut(s) 150, 398, 679, 806
PflMI CCANNNNNTGG 1 cut(s) 170
PkrI GCNGC 9 cut(s) 652, 655, 688, 691, 951, 1096, 1099, 1201, 1213
PleI GAGTC 3 cut(s) 76, 668, 846
PmaCI CACGTG 1 cut(s) 240
PmlI CACGTG 1 cut(s) 240
PpsI GAGTC 3 cut(s) 76, 668, 846
Ppu21I YACGTR 1 cut(s) 240
PscI ACATGT 1 cut(s) 537
PshBI ATTAAT 1 cut(s) 17
Psp124BI GAGCTC 2 cut(s) 72, 216
Psp6I CCWGG 1 cut(s) 586
PspCI CACGTG 1 cut(s) 240
PspEI GGTNACC 1 cut(s) 757
PspGI CCWGG 1 cut(s) 586
PspN4I GGNNCC 2 cut(s) 286, 1026
PspPI GGNCC 4 cut(s) 34, 590, 1012, 1141
PspXI VCTCGAGB 1 cut(s) 71
PvuII CAGCTG 2 cut(s) 653, 698
RsaI GTAC 3 cut(s) 161, 236, 770
RsaNI GTAC 3 cut(s) 160, 235, 769
RseI CAYNNNNRTG 2 cut(s) 387, 912
SacI GAGCTC 2 cut(s) 72, 216
SapI GCTCTTC 1 cut(s) 714
SaqAI TTAA 5 cut(s) 17, 509, 773, 969, 1259
SatI GCNGC 9 cut(s) 651, 654, 687, 690, 950, 1095, 1098, 1200, 1212
Sau3AI GATC 3 cut(s) 798, 873, 1050
Sau96I GGNCC 4 cut(s) 34, 590, 1012, 1141
SchI GAGTC 3 cut(s) 76, 668, 846
ScrFI CCNGG 2 cut(s) 588, 751
SduI GDGCHC 4 cut(s) 72, 186, 216, 923
SfaNI GCATC 4 cut(s) 107, 510, 701, 916
SfcI CTRYAG 1 cut(s) 1191
Sfr274I CTCGAG 1 cut(s) 71
SinI GGWCC 2 cut(s) 590, 1141
SlaI CTCGAG 1 cut(s) 71
SmiMI CAYNNNNRTG 2 cut(s) 387, 912
SmlI CTYRAG 2 cut(s) 71, 743
SmoI CTYRAG 2 cut(s) 71, 743
SphI GCATGC 2 cut(s) 650, 995
Sse9I AATT 2 cut(s) 228, 1101
SsiI CCGC 2 cut(s) 947, 1094
SspMI CTAG 2 cut(s) 224, 599
SstI GAGCTC 2 cut(s) 72, 216
StyD4I CCNGG 2 cut(s) 586, 749
TaaI ACNGT 3 cut(s) 628, 763, 925
TaiI ACGT 1 cut(s) 242
TaqI TCGA 6 cut(s) 72, 177, 216, 677, 910, 1173
TasI AATT 2 cut(s) 228, 1101
TatI WGTACW 1 cut(s) 234
TauI GCSGC 1 cut(s) 1097
TfiI GAWTC 4 cut(s) 150, 398, 679, 806
Tru1I TTAA 5 cut(s) 17, 509, 773, 969, 1259
Tru9I TTAA 5 cut(s) 17, 509, 773, 969, 1259
TscAI CASTG 3 cut(s) 64, 300, 966
TseFI GTSAC 2 cut(s) 392, 757
TseI GCWGC 8 cut(s) 650, 653, 686, 689, 949, 1097, 1199, 1211
Tsp45I GTSAC 2 cut(s) 392, 757
TspDTI ATGAA 2 cut(s) 990, 1140
TspGWI ACGGA 1 cut(s) 224
TspRI CASTG 3 cut(s) 64, 300, 966
Van91I CCANNNNNTGG 1 cut(s) 170
VpaK11BI GGWCC 2 cut(s) 590, 1141
VspI ATTAAT 1 cut(s) 17
XceI RCATGY 4 cut(s) 390, 541, 650, 995
XcmI CCANNNNNNNNNTGG 2 cut(s) 259, 563
XhoI CTCGAG 1 cut(s) 71
XspI CTAG 2 cut(s) 224, 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.