Rmu_sc0003093.1_g000012

Iaa-amino acid hydrolase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003093.1
Physical Location & Seq
Reverse (-)
54588 .. 56690
2103 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003093.1_g000012.1.cds

Sequence Viewer

Length: 1293 bp
atgctcttctgcttattgctgttgtccatcttaagccaatcatgggctttggaagcaactgccactgagtcggatcagctggggttattgactcgggagttgctggagtcggccaaggaacccgagttctttgaatggatgataggagtgaggagaagaatccaccagtacccagagactggtttcgaggagtacaggacgagtcaactcataaggtccgagcttgactcgcttgggatcaagtacacctggcctgttgccaagactggtattgttgcttctatcgggtccgggtccaaacccgtcttcgctctcagagctgacatggacgcccttcctattcaggaacaagtagagtgggaattcaagagcaaaatagatggcaaaatgcacgcttgtggtcacgatgctcatgtagcaatgttgcttggtgcagccaggatactccagagtagaagagacgtgctaaagggaactgtgaagctggtttttcagccgggagaggagggttacgctggagcttaccatatgctacaacatggtattcttaatgacatcgatgccatcttctttatacatgttgtggcagagctgcccactggtgtcatttcttcaaggccagggcaaatgctggctggttctggcagattttcagctacgatcacaggaaaaggtggacatgccgctgcaccacataagaatagggacccaattattgctgcagcatctgctgttttggctctccaacagattgtatcaagagaaatcgatcctcttgaatccacagtggtcacagttgggtacttggagggaggtaaagcagcaaatgtaatccccgagtccgtaaaatttggagggacttataggagcttgagtcctgaaggcctcatctatctcaaagaaaggatcaaagaggtcaccgaactgcaagctctcgtgcatagatgtaatgctacgctggactttaaggaggagacgccactaccttatcctgtaatgattaacgatgaagcattgtatgggcatataaagaaggttggagaggctttagttggggaacctaatgttcattttttcccaatgatcatgggagcagaggatttcagcttctactcgcagcacttcgctgccacaatctttgtgctaggggtgaagaatgagactcagaaaccagaccggcctttgcacacacctttctttgtaattgatgaagaggcactctcaataggagtagctctgaatgctgctgtagcaatctcttacttggatagacctcttatcgagtctcattaa

Protein Analysis

430

Amino Acids

47.28

Weight (kDa)

5.63

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 179
AciI CCGC 1 cut(s) 684
AclWI GGATC 4 cut(s) 81, 245, 764, 914
AcoI YGGCCR 1 cut(s) 111
AcsI RAATTY 2 cut(s) 362, 848
AcuI CTGAAG 1 cut(s) 900
AcyI GRCGYC 2 cut(s) 330, 977
AfaI GTAC 4 cut(s) 170, 194, 245, 803
AfiI CCNNNNNNNGG 2 cut(s) 43, 179
AflII CTTAAG 1 cut(s) 31
AflIII ACRYGT 1 cut(s) 577
AgsI TTSAA 4 cut(s) 134, 367, 615, 779
AjiI CACGTC 1 cut(s) 463
AjnI CCWGG 3 cut(s) 248, 437, 619
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
AleI CACNNNNGTG 1 cut(s) 396
AloI GAACNNNNNNTCC 2 cut(s) 110, 142
Alw26I GTCTC 4 cut(s) 170, 453, 968, 1154
AlwI GGATC 4 cut(s) 81, 245, 764, 914
AlwNI CAGNNNCTG 2 cut(s) 179, 728
Ama87I CYCGRG 3 cut(s) 93, 122, 836
AoxI GGCC 5 cut(s) 111, 251, 617, 883, 1178
ApeKI GCWGC 9 cut(s) 434, 592, 686, 719, 722, 821, 1117, 1127, 1244
ApoI RAATTY 2 cut(s) 362, 848
AspS9I GGNCC 4 cut(s) 216, 288, 294, 706
AsuC2I CCSGG 2 cut(s) 292, 498
AsuHPI GGTGA 2 cut(s) 910, 1162
AvaI CYCGRG 3 cut(s) 93, 122, 836
AvaII GGWCC 4 cut(s) 216, 288, 294, 706
BarI GAAGNNNNNNTAC 2 cut(s) 262, 294
BauI CACGAG 1 cut(s) 935
BbsI GAAGAC 1 cut(s) 298
BbvI GCAGC 9 cut(s) 446, 579, 673, 706, 734, 833, 1114, 1129, 1231
BccI CCATC 3 cut(s) 35, 374, 572
BciT130I CCWGG 3 cut(s) 250, 439, 621
BciVI GTATCC 1 cut(s) 435
BclI TGATCA 1 cut(s) 1083
BcnI CCSGG 2 cut(s) 292, 498
BcoDI GTCTC 4 cut(s) 170, 453, 968, 1154
BfaI CTAG 1 cut(s) 1145
BfmI CTRYAG 2 cut(s) 720, 1248
BfrI CTTAAG 1 cut(s) 31
BfuI GTATCC 1 cut(s) 435
Bme1390I CCNGG 5 cut(s) 250, 292, 439, 498, 621
Bme18I GGWCC 4 cut(s) 216, 288, 294, 706
BmeT110I CYCGRG 3 cut(s) 93, 122, 836
BmgBI CACGTC 1 cut(s) 463
BmgT120I GGNCC 4 cut(s) 216, 288, 294, 706
BmiI GGNNCC 6 cut(s) 120, 289, 295, 707, 708, 1059
BmrFI CCNGG 5 cut(s) 250, 292, 439, 498, 621
BmsI GCATC 3 cut(s) 397, 550, 734
BpiI GAAGAC 1 cut(s) 298
BplI GAGNNNNNCTC 4 cut(s) 212, 244, 1205, 1237
BpmI CTGGAG 3 cut(s) 125, 431, 537
BpuEI CTTGAG 1 cut(s) 892
BpuMI CCSGG 2 cut(s) 292, 498
Bsa29I ATCGAT 2 cut(s) 558, 768
BsaHI GRCGYC 2 cut(s) 330, 977
BsaJI CCNNGG 2 cut(s) 114, 620
BsaXI ACNNNNNCTCC 2 cut(s) 859, 889
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 179
Bse118I RCCGGY 1 cut(s) 1176
Bse1I ACTGG 4 cut(s) 166, 184, 271, 604
Bse3DI GCAATG 1 cut(s) 426
BseBI CCWGG 3 cut(s) 250, 439, 621
BseCI ATCGAT 2 cut(s) 558, 768
BseDI CCNNGG 2 cut(s) 114, 620
BseGI GGATG 1 cut(s) 144
BseLI CCNNNNNNNGG 2 cut(s) 43, 179
BseMI GCAATG 1 cut(s) 426
BseMII CTCAG 3 cut(s) 57, 328, 1178
BseNI ACTGG 4 cut(s) 166, 184, 271, 604
BseRI GAGGAG 4 cut(s) 166, 203, 518, 986
BseXI GCAGC 9 cut(s) 446, 579, 673, 706, 734, 833, 1114, 1129, 1231
BseYI CCCAGC 1 cut(s) 79
BsgI GTGCAG 2 cut(s) 453, 672
BshFI GGCC 5 cut(s) 113, 253, 619, 885, 1180
BshVI ATCGAT 2 cut(s) 558, 768
BsiHKCI CYCGRG 3 cut(s) 93, 122, 836
BsiSI CCGG 3 cut(s) 291, 497, 1177
BslFI GGGAC 2 cut(s) 719, 871
BslI CCNNNNNNNGG 2 cut(s) 43, 179
BsmAI GTCTC 4 cut(s) 170, 453, 968, 1154
BsmBI CGTCTC 2 cut(s) 453, 968
BsmFI GGGAC 2 cut(s) 719, 871
BsmI GAATGC 1 cut(s) 1246
BsnI GGCC 5 cut(s) 113, 253, 619, 885, 1180
BsoBI CYCGRG 3 cut(s) 93, 122, 836
Bsp143I GATC 6 cut(s) 73, 237, 660, 769, 906, 1083
BspACI CCGC 1 cut(s) 684
BspANI GGCC 5 cut(s) 113, 253, 619, 885, 1180
BspCNI CTCAG 3 cut(s) 58, 327, 1177
BspDI ATCGAT 2 cut(s) 558, 768
BspLI GGNNCC 6 cut(s) 120, 289, 295, 707, 708, 1059
BspMAI CTGCAG 1 cut(s) 724
BspPI GGATC 4 cut(s) 81, 245, 764, 914
BspQI GCTCTTC 1 cut(s) 11
BspTI CTTAAG 1 cut(s) 31
BsrDI GCAATG 1 cut(s) 426
BsrFI RCCGGY 1 cut(s) 1176
BsrI ACTGG 4 cut(s) 166, 184, 271, 604
BssAI RCCGGY 1 cut(s) 1176
BssECI CCNNGG 2 cut(s) 114, 620
BssMI GATC 6 cut(s) 73, 237, 660, 769, 906, 1083
BssNI GRCGYC 2 cut(s) 330, 977
BssSI CACGAG 1 cut(s) 935
BssT1I CCWWGG 1 cut(s) 114
Bst2BI CACGAG 1 cut(s) 935
Bst2UI CCWGG 3 cut(s) 250, 439, 621
Bst4CI ACNGT 3 cut(s) 478, 787, 796
Bst6I CTCTTC 3 cut(s) 11, 451, 1206
BstACI GRCGYC 2 cut(s) 330, 977
BstAFI CTTAAG 1 cut(s) 31
BstAPI GCANNNNNTGC 1 cut(s) 728
BstC8I GCNNGC 3 cut(s) 393, 633, 930
BstDEI CTNAG 3 cut(s) 66, 314, 1164
BstEII GGTNACC 1 cut(s) 916
BstF5I GGATG 1 cut(s) 144
BstKTI GATC 6 cut(s) 76, 240, 663, 772, 909, 1086
BstMAI GTCTC 4 cut(s) 170, 453, 968, 1154
BstMBI GATC 6 cut(s) 73, 237, 660, 769, 906, 1083
BstMWI GCNNNNNNNGC 8 cut(s) 53, 229, 317, 416, 728, 737, 1241, 1250
BstNI CCWGG 3 cut(s) 250, 439, 621
BstNSI RCATGY 2 cut(s) 581, 683
BstPI GGTNACC 1 cut(s) 916
BstSCI CCNGG 5 cut(s) 248, 290, 437, 496, 619
BstSFI CTRYAG 2 cut(s) 720, 1248
BstV1I GCAGC 9 cut(s) 446, 579, 673, 706, 734, 833, 1114, 1129, 1231
BstV2I GAAGAC 1 cut(s) 298
Bsu15I ATCGAT 2 cut(s) 558, 768
BsuI GTATCC 1 cut(s) 435
BsuRI GGCC 5 cut(s) 113, 253, 619, 885, 1180
BsuTUI ATCGAT 2 cut(s) 558, 768
BtrI CACGTC 1 cut(s) 463
BtsCI GGATG 1 cut(s) 144
BtsIMutI CAGTG 3 cut(s) 63, 597, 792
Cac8I GCNNGC 3 cut(s) 393, 633, 930
CaiI CAGNNNCTG 2 cut(s) 179, 728
Cfr10I RCCGGY 1 cut(s) 1176
Cfr13I GGNCC 4 cut(s) 216, 288, 294, 706
ClaI ATCGAT 2 cut(s) 558, 768
CseI GACGC 2 cut(s) 338, 985
Csp6I GTAC 4 cut(s) 169, 193, 244, 802
CspCI CAANNNNNGTGG 4 cut(s) 338, 373, 1120, 1155
CviAII CATG 7 cut(s) 42, 325, 413, 539, 578, 680, 1087
CviQI GTAC 4 cut(s) 169, 193, 244, 802
DdeI CTNAG 3 cut(s) 66, 314, 1164
DpnI GATC 6 cut(s) 75, 239, 662, 771, 908, 1085
DpnII GATC 6 cut(s) 73, 237, 660, 769, 906, 1083
EaeI YGGCCR 1 cut(s) 111
Eam1104I CTCTTC 3 cut(s) 11, 451, 1206
EarI CTCTTC 3 cut(s) 11, 451, 1206
Eco130I CCWWGG 1 cut(s) 114
Eco147I AGGCCT 1 cut(s) 885
Eco47I GGWCC 4 cut(s) 216, 288, 294, 706
Eco57I CTGAAG 1 cut(s) 900
Eco88I CYCGRG 3 cut(s) 93, 122, 836
Eco91I GGTNACC 1 cut(s) 916
EcoO109I RGGNCCY 1 cut(s) 706
EcoO65I GGTNACC 1 cut(s) 916
EcoRI GAATTC 1 cut(s) 362
EcoRII CCWGG 3 cut(s) 248, 437, 619
EcoT14I CCWWGG 1 cut(s) 114
ErhI CCWWGG 1 cut(s) 114
Esp3I CGTCTC 2 cut(s) 453, 968
FaeI CATG 7 cut(s) 45, 328, 416, 542, 581, 683, 1090
FaqI GGGAC 2 cut(s) 719, 871
FatI CATG 7 cut(s) 41, 324, 412, 538, 577, 679, 1086
FauNDI CATATG 1 cut(s) 528
FbaI TGATCA 1 cut(s) 1083
FokI GGATG 1 cut(s) 151
FspBI CTAG 1 cut(s) 1145
GsaI CCCAGC 1 cut(s) 83
GsuI CTGGAG 3 cut(s) 125, 431, 537
HaeIII GGCC 5 cut(s) 113, 253, 619, 885, 1180
HapII CCGG 3 cut(s) 291, 497, 1177
HgaI GACGC 2 cut(s) 338, 985
Hin1I GRCGYC 2 cut(s) 330, 977
Hin1II CATG 7 cut(s) 45, 328, 416, 542, 581, 683, 1090
HincII GTYRAC 1 cut(s) 206
HindII GTYRAC 1 cut(s) 206
HpaII CCGG 3 cut(s) 291, 497, 1177
HphI GGTGA 2 cut(s) 910, 1162
Hpy166II GTNNAC 3 cut(s) 206, 246, 677
Hpy188I TCNGA 5 cut(s) 73, 220, 317, 1167, 1239
Hpy188III TCNNGA 8 cut(s) 95, 344, 367, 404, 448, 759, 776, 878
Hpy8I GTNNAC 3 cut(s) 206, 246, 677
HpyAV CCTTC 3 cut(s) 344, 875, 1027
HpyCH4III ACNGT 3 cut(s) 478, 787, 796
HpyCH4IV ACGT 1 cut(s) 462
HpyCH4V TGCA 7 cut(s) 391, 434, 689, 722, 928, 940, 1186
HpyF10VI GCNNNNNNNGC 8 cut(s) 53, 229, 317, 416, 728, 737, 1241, 1250
HpyF3I CTNAG 3 cut(s) 66, 314, 1164
HpySE526I ACGT 1 cut(s) 462
Hsp92I GRCGYC 2 cut(s) 330, 977
Hsp92II CATG 7 cut(s) 45, 328, 416, 542, 581, 683, 1090
KflI GGGWCCC 1 cut(s) 706
Ksp22I TGATCA 1 cut(s) 1083
Kzo9I GATC 6 cut(s) 73, 237, 660, 769, 906, 1083
LguI GCTCTTC 1 cut(s) 11
LmnI GCTCC 3 cut(s) 518, 867, 1091
Lsp1109I GCAGC 9 cut(s) 446, 579, 673, 706, 734, 833, 1114, 1129, 1231
LweI GCATC 3 cut(s) 397, 550, 734
MaeI CTAG 1 cut(s) 1145
MaeII ACGT 1 cut(s) 462
MaeIII GTNAC 4 cut(s) 401, 509, 790, 916
MalI GATC 6 cut(s) 75, 239, 662, 771, 908, 1085
MboI GATC 6 cut(s) 73, 237, 660, 769, 906, 1083
MboII GAAGA 7 cut(s) 168, 298, 468, 559, 603, 1165, 1223
MluCI AATT 4 cut(s) 362, 711, 848, 1203
MlyI GAGTC 9 cut(s) 77, 85, 116, 211, 221, 848, 883, 1156, 1292
MmeI TCCRAC 3 cut(s) 51, 769, 1018
MseI TTAA 5 cut(s) 32, 549, 966, 1002, 1291
MslI CAYNNNNRTG 1 cut(s) 396
MspA1I CMGCKG 2 cut(s) 79, 686
MspCI CTTAAG 1 cut(s) 31
MspI CCGG 3 cut(s) 291, 497, 1177
MspR9I CCNGG 5 cut(s) 250, 292, 439, 498, 621
Mva1269I GAATGC 1 cut(s) 1246
MvaI CCWGG 3 cut(s) 250, 439, 621
MwoI GCNNNNNNNGC 8 cut(s) 53, 229, 317, 416, 728, 737, 1241, 1250
NciI CCSGG 2 cut(s) 292, 498
NdeI CATATG 1 cut(s) 528
NdeII GATC 6 cut(s) 73, 237, 660, 769, 906, 1083
NlaIII CATG 7 cut(s) 45, 328, 416, 542, 581, 683, 1090
NlaIV GGNNCC 6 cut(s) 120, 289, 295, 707, 708, 1059
NmuCI GTSAC 3 cut(s) 401, 790, 916
NspI RCATGY 2 cut(s) 581, 683
OliI CACNNNNGTG 1 cut(s) 396
PceI AGGCCT 1 cut(s) 885
PciI ACATGT 1 cut(s) 577
PciSI GCTCTTC 1 cut(s) 11
PctI GAATGC 1 cut(s) 1246
PfeI GAWTC 2 cut(s) 159, 779
PflMI CCANNNNNTGG 1 cut(s) 179
PleI GAGTC 9 cut(s) 76, 85, 115, 210, 221, 847, 882, 1156, 1291
PpsI GAGTC 9 cut(s) 76, 85, 115, 210, 221, 847, 882, 1156, 1291
PpuMI RGGWCCY 1 cut(s) 706
PscI ACATGT 1 cut(s) 577
Psp5II RGGWCCY 1 cut(s) 706
Psp6I CCWGG 3 cut(s) 248, 437, 619
PspEI GGTNACC 1 cut(s) 916
PspFI CCCAGC 1 cut(s) 79
PspGI CCWGG 3 cut(s) 248, 437, 619
PspN4I GGNNCC 6 cut(s) 120, 289, 295, 707, 708, 1059
PspPI GGNCC 4 cut(s) 216, 288, 294, 706
PspPPI RGGWCCY 1 cut(s) 706
PstI CTGCAG 1 cut(s) 724
PstNI CAGNNNCTG 2 cut(s) 179, 728
PvuII CAGCTG 1 cut(s) 79
RsaI GTAC 4 cut(s) 170, 194, 245, 803
RsaNI GTAC 4 cut(s) 169, 193, 244, 802
RseI CAYNNNNRTG 1 cut(s) 396
SapI GCTCTTC 1 cut(s) 11
SaqAI TTAA 5 cut(s) 32, 549, 966, 1002, 1291
Sau3AI GATC 6 cut(s) 73, 237, 660, 769, 906, 1083
Sau96I GGNCC 4 cut(s) 216, 288, 294, 706
SchI GAGTC 9 cut(s) 77, 85, 116, 211, 221, 848, 883, 1156, 1292
ScrFI CCNGG 5 cut(s) 250, 292, 439, 498, 621
SfaNI GCATC 3 cut(s) 397, 550, 734
SfcI CTRYAG 2 cut(s) 720, 1248
SinI GGWCC 4 cut(s) 216, 288, 294, 706
SmiMI CAYNNNNRTG 1 cut(s) 396
SmlI CTYRAG 2 cut(s) 31, 871
SmoI CTYRAG 2 cut(s) 31, 871
Sse9I AATT 4 cut(s) 362, 711, 848, 1203
SseBI AGGCCT 1 cut(s) 885
SsiI CCGC 1 cut(s) 684
SspMI CTAG 1 cut(s) 1145
StuI AGGCCT 1 cut(s) 885
StyD4I CCNGG 5 cut(s) 248, 290, 437, 496, 619
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 3 cut(s) 478, 787, 796
TaiI ACGT 1 cut(s) 465
TaqI TCGA 4 cut(s) 186, 558, 768, 1281
TasI AATT 4 cut(s) 362, 711, 848, 1203
TatI WGTACW 2 cut(s) 192, 243
TauI GCSGC 1 cut(s) 686
TfiI GAWTC 2 cut(s) 159, 779
Tru1I TTAA 5 cut(s) 32, 549, 966, 1002, 1291
Tru9I TTAA 5 cut(s) 32, 549, 966, 1002, 1291
TscAI CASTG 3 cut(s) 70, 604, 792
TseFI GTSAC 3 cut(s) 401, 790, 916
TseI GCWGC 9 cut(s) 434, 592, 686, 719, 722, 821, 1117, 1127, 1244
Tsp45I GTSAC 3 cut(s) 401, 790, 916
TspDTI ATGAA 3 cut(s) 1023, 1058, 1224
TspGWI ACGGA 1 cut(s) 832
TspRI CASTG 3 cut(s) 70, 604, 792
Van91I CCANNNNNTGG 1 cut(s) 179
Vha464I CTTAAG 1 cut(s) 31
VpaK11BI GGWCC 4 cut(s) 216, 288, 294, 706
XapI RAATTY 2 cut(s) 362, 848
XceI RCATGY 2 cut(s) 581, 683
XspI CTAG 1 cut(s) 1145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.