Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001413

Physical Location & Seq

Genomic Coordinates Reverse (-)

1393142 .. 1397627

Gene Structure 4486 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G05030.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGACAATGTTCGCCTCTTTAACCTCTAAAATGCTATCGGTGTCAACTTCTGATCACGCATCTGTCGTTTCACTTAATCTCTTTGTTGCCCTTCTATGTGCTTGTATCGTCATTGGCCATCTTTTGGAGGAGAATCGATGGATGAACGAATCCATCACTGCTTTATTGATTGGGCTTGGCACTGGTGTCGTCATATTGTTGATTAGTAGAGGGAAAAACTCACATCTCTTGGTCTTTAGTGAAGATCTCTTCTTTATATATCTTTTGCCACCCATAATATTCAATGCAGGGTTTCAAGTAAAAAAGAAGCAGTTTTTCCGAAATTTTGTAACTATTATGGCTTTTGGCGCCATTGGGACCGTAGTTTCTTGCACCATAATATCTCTAGGTGCAATTCAGTTCTTTAAGAAATTAGACATTGGGACCTTTGACTTGGGCGATTTTCTTGCAATCGGCGCCATATTTGCTGCAACCGACTCTGTATGCACACTACAGGTTCTCAATCAAGATGAGACACCTTTGCTTTACAGTCTTGTATTTGGAGAGGGCGTTGTGAATGATGCCACATCTGTTGTGCTCTTCAATGCTATTCAGAGTTTTGACCTCACCCACCTTAACCATGAAGCAGCTTTTCAATTTCTTGGGAACTTTTTTTATCTGTTTCTCTTGAGCACCGGACTTGGTGTCGCAACTGGTCTGATAAGTGCTTATGTCATCAAGAAACTGTATTTTGGAAGGCACTCGACTGATCGAGAAGTTGCCCTCATGATGCTTATGGCTTATCTTTCATATATGCTTGCTGAGCTATTCGCCTTGAGTGGTATCCTAACTGTATTTTTCTGTGGGATTGTGATGTCCCATTACACTTGGCACAATGTCACCGAGAGCTCAAGAATTACTACCAAGCATGCCTTTGCTACTTTGTCGTTTCTCGCTGAGACTTTTATTTTCCTCTACGTTGGAATGGATGCATTGGACATAGAGAAATGGAGATTCGTGAGTGACAGCCCGGGGACATCAGTTGCAGTGAGCTCAATTCTAATGGGTCTAGTCATGCTTGGAAGAGCAGCTTTTGTCTTTCCTCTTTCCTTCTTATCAAACTTAGCCAAGAAGCATCAGAGCGAGAAAATCAGCATCAAGCAGCAAGTTGTGATCTGGTGGGCTGGTCTAATGAGAGGTGCTGTATCTATGGCTCTTGCCTACAATAAGTTTACAAGATCAGGGCACACAGAATTGCGCGGGAATGCAATCATGATTACCAGTACAATAACCGTCTGTCTTTTTAGCACCATGGTGTTTGGTATGCTAACCAAACCACTGATTAGATACCTAATGCCACACCAAAAAGCGACCACCAGTACCACGAGTATGTTATCGGACGATAGCACTCCGAAATCAATCCACATTCCGCTCCTCGATGGTGAACAGCTAGATTCATTTGAGTTACCTGGGAGCCACCAGGACGTGCCACGACCAAACAGCCTTCGAGGTTTCCTCATGCGCCCCACACGGACTGTCCACTATTACTGGAGACAGTTTGATGATGCCTTCATGCGTCCTGTGTTTGGTGGTCGCGGATTCGTTCCCTTTGTCCCTGGTTCTCCGACTGAGAGAAGCAGCCATGATCTTAGTAAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008324 GO:0009628 GO:0009651 GO:0009987 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0090333 GO:0098588 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0098805 GO:0099402 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

546

Amino Acids

60.52

Weight (kDa)

8.14

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	30 - 441	6.4e-55	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05030 AT3G05030 AT3G05030 AT3G05030 AT5G27150
fragaria_vesca	FvH4_4g17120 FvH4_4g17120 FvH4_6g04140
malus_domestica	MD00G1051300.v1.1 MD12G1232400.v1.1 MD13G1174300.v1.1 MD16G1175800.v1.1
prunus_persica	Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.6G335800_v2.0.a1
pyrus_communis	pycom12g21480 pycom13g14990 pycom16g14730
rosa_chinensis	RchiOBHm_Chr3g0452721 RchiOBHm_Chr4g0420901 RchiOBHm_Chr5g0080441
rosa_laevigata	RLG00000007726 RLG00000025572
rosa_multiflora	Rmu_sc0002006.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363300 Rroxscaffold_6G00429730
rosa_rugosa	Rorug02G0642900 Rorug02G0642900 Rorug04G0166900 Rorug04G0167000 Rorug04G0167100
rosa_samantha	Rh3AG045100 Rh3BG047600 Rh3CG046100 Rh3DG046400 Rh4BG231400 Rh4DG226500
rosa_wichuraiana	Rw3G003530 Rw4G019760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	347, 455
AccB7I	CCANNNNNTGG	1 cut(s)	124
AccBSI	CCGCTC	1 cut(s)	1411
AccII	CGCG	2 cut(s)	1239, 1575
AciI	CCGC	3 cut(s)	1239, 1409, 1575
AcoI	YGGCCR	1 cut(s)	115
AcsI	RAATTY	1 cut(s)	322
AcyI	GRCGYC	2 cut(s)	348, 456
AfaI	GTAC	2 cut(s)	1264, 1360
AfiI	CCNNNNNNNGG	2 cut(s)	124, 1565
AgsI	TTSAA	4 cut(s)	283, 296, 583, 635
AhdI	GACNNNNNGTC	1 cut(s)	683
AjiI	CACGTC	1 cut(s)	1465
AjnI	CCWGG	3 cut(s)	1447, 1458, 1594
AleI	CACNNNNGTG	1 cut(s)	1292
AluBI	AGCT	6 cut(s)	629, 805, 888, 1032, 1070, 1429
AluI	AGCT	6 cut(s)	629, 805, 888, 1032, 1070, 1429
Alw21I	GWGCWC	4 cut(s)	579, 674, 890, 1034
Alw26I	GTCTC	3 cut(s)	506, 932, 1525
Ama87I	CYCGRG	1 cut(s)	1009
AoxI	GGCC	1 cut(s)	115
ApeKI	GCWGC	5 cut(s)	467, 626, 1067, 1141, 1617
ApoI	RAATTY	1 cut(s)	322
AspLEI	GCGC	4 cut(s)	350, 458, 1239, 1503
AspS9I	GGNCC	2 cut(s)	357, 423
AsuC2I	CCSGG	2 cut(s)	1010, 1011
AsuHPI	GGTGA	3 cut(s)	598, 871, 1433
AvaI	CYCGRG	1 cut(s)	1009
AvaII	GGWCC	2 cut(s)	357, 423
BaeGI	GKGCMC	1 cut(s)	1227
BalI	TGGCCA	1 cut(s)	117
BanI	GGYRCC	2 cut(s)	347, 455
BanII	GRGCYC	2 cut(s)	890, 1034
BauI	CACGAG	1 cut(s)	1363
Bbv12I	GWGCWC	4 cut(s)	579, 674, 890, 1034
BbvI	GCAGC	5 cut(s)	454, 638, 1079, 1153, 1629
BccI	CCATC	4 cut(s)	126, 132, 161, 1412
BcgI	CGANNNNNNTGC	4 cut(s)	169, 203, 428, 462
BciT130I	CCWGG	3 cut(s)	1449, 1460, 1596
BciVI	GTATCC	1 cut(s)	833
BclI	TGATCA	1 cut(s)	52
BcnI	CCSGG	2 cut(s)	1010, 1011
BcoDI	GTCTC	3 cut(s)	506, 932, 1525
BfaI	CTAG	3 cut(s)	386, 1049, 1430
BfmI	CTRYAG	1 cut(s)	491
BfoI	RGCGCY	2 cut(s)	351, 459
BfuI	GTATCC	1 cut(s)	833
BglII	AGATCT	1 cut(s)	244
BisI	GCNGC	5 cut(s)	468, 627, 1068, 1142, 1618
BlpI	GCTNAGC	1 cut(s)	801
BlsI	GCNGC	5 cut(s)	469, 628, 1069, 1143, 1619
Bme1390I	CCNGG	5 cut(s)	1010, 1011, 1449, 1460, 1596
Bme18I	GGWCC	2 cut(s)	357, 423
BmeRI	GACNNNNNGTC	1 cut(s)	683
BmeT110I	CYCGRG	1 cut(s)	1009
BmgBI	CACGTC	1 cut(s)	1465
BmgT120I	GGNCC	2 cut(s)	357, 423
BmiI	GGNNCC	5 cut(s)	349, 358, 424, 457, 1454
BmrFI	CCNGG	5 cut(s)	1010, 1011, 1449, 1460, 1596
BmsI	GCATC	7 cut(s)	68, 550, 759, 958, 1123, 1143, 1534
BplI	GAGNNNNNCTC	2 cut(s)	1479, 1511
BpmI	CTGGAG	1 cut(s)	1549
Bpu1102I	GCTNAGC	1 cut(s)	801
BpuEI	CTTGAG	3 cut(s)	688, 835, 874
BpuMI	CCSGG	2 cut(s)	1010, 1011
Bsa29I	ATCGAT	1 cut(s)	136
BsaHI	GRCGYC	2 cut(s)	348, 456
BsaJI	CCNNGG	5 cut(s)	1009, 1010, 1290, 1448, 1594
BsaWI	WCCGGW	1 cut(s)	674
BsaXI	ACNNNNNCTCC	2 cut(s)	534, 564
Bsc4I	CCNNNNNNNGG	2 cut(s)	124, 1565
Bse1I	ACTGG	5 cut(s)	187, 697, 1260, 1356, 1532
BseBI	CCWGG	3 cut(s)	1449, 1460, 1596
BseCI	ATCGAT	1 cut(s)	136
BseDI	CCNNGG	5 cut(s)	1009, 1010, 1290, 1448, 1594
BseGI	GGATG	2 cut(s)	147, 973
BseLI	CCNNNNNNNGG	2 cut(s)	124, 1565
BseMII	CTCAG	3 cut(s)	792, 927, 1599
BseNI	ACTGG	5 cut(s)	187, 697, 1260, 1356, 1532
BseRI	GAGGAG	2 cut(s)	143, 1403
BseSI	GKGCMC	1 cut(s)	1227
BseXI	GCAGC	5 cut(s)	454, 638, 1079, 1153, 1629
Bsh1236I	CGCG	2 cut(s)	1239, 1575
BshFI	GGCC	1 cut(s)	117
BshNI	GGYRCC	2 cut(s)	347, 455
BshVI	ATCGAT	1 cut(s)	136
BsiHKAI	GWGCWC	4 cut(s)	579, 674, 890, 1034
BsiHKCI	CYCGRG	1 cut(s)	1009
BsiSI	CCGG	2 cut(s)	675, 1010
BslFI	GGGAC	5 cut(s)	370, 436, 841, 1027, 1577
BslI	CCNNNNNNNGG	2 cut(s)	124, 1565
BsmAI	GTCTC	3 cut(s)	506, 932, 1525
BsmFI	GGGAC	5 cut(s)	370, 436, 841, 1027, 1577
BsmI	GAATGC	1 cut(s)	1249
BsnI	GGCC	1 cut(s)	117
BsoBI	CYCGRG	1 cut(s)	1009
Bsp1286I	GDGCHC	5 cut(s)	579, 674, 890, 1034, 1227
Bsp143I	GATC	6 cut(s)	52, 244, 748, 1152, 1217, 1624
Bsp1720I	GCTNAGC	1 cut(s)	801
Bsp19I	CCATGG	1 cut(s)	1290
BspACI	CCGC	3 cut(s)	1239, 1409, 1575
BspANI	GGCC	1 cut(s)	117
BspCNI	CTCAG	3 cut(s)	793, 928, 1600
BspDI	ATCGAT	1 cut(s)	136
BspFNI	CGCG	2 cut(s)	1239, 1575
BspHI	TCATGA	2 cut(s)	765, 1251
BspLI	GGNNCC	5 cut(s)	349, 358, 424, 457, 1454
BspQI	GCTCTTC	2 cut(s)	584, 1057
BspT107I	GGYRCC	2 cut(s)	347, 455
BsrBI	CCGCTC	1 cut(s)	1411
BsrI	ACTGG	5 cut(s)	187, 697, 1260, 1356, 1532
BssECI	CCNNGG	5 cut(s)	1009, 1010, 1290, 1448, 1594
BssMI	GATC	6 cut(s)	52, 244, 748, 1152, 1217, 1624
BssNI	GRCGYC	2 cut(s)	348, 456
BssSI	CACGAG	1 cut(s)	1363
BssT1I	CCWWGG	1 cut(s)	1290
Bst2BI	CACGAG	1 cut(s)	1363
Bst2UI	CCWGG	3 cut(s)	1449, 1460, 1596
Bst4CI	ACNGT	7 cut(s)	361, 530, 726, 832, 1273, 1516, 1536
Bst6I	CTCTTC	3 cut(s)	254, 584, 1057
BstACI	GRCGYC	2 cut(s)	348, 456
BstC8I	GCNNGC	2 cut(s)	798, 909
BstDEI	CTNAG	5 cut(s)	801, 936, 1102, 1608, 1628
BstDSI	CCRYGG	1 cut(s)	1290
BstF5I	GGATG	2 cut(s)	147, 973
BstFNI	CGCG	2 cut(s)	1239, 1575
BstH2I	RGCGCY	2 cut(s)	351, 459
BstHHI	GCGC	4 cut(s)	350, 458, 1239, 1503
BstKTI	GATC	6 cut(s)	55, 247, 751, 1155, 1220, 1627
BstMAI	GTCTC	3 cut(s)	506, 932, 1525
BstMBI	GATC	6 cut(s)	52, 244, 748, 1152, 1217, 1624
BstMWI	GCNNNNNNNGC	4 cut(s)	347, 455, 464, 802
BstNI	CCWGG	3 cut(s)	1449, 1460, 1596
BstNSI	RCATGY	1 cut(s)	911
BstSCI	CCNGG	5 cut(s)	1008, 1009, 1447, 1458, 1594
BstSFI	CTRYAG	1 cut(s)	491
BstSLI	GKGCMC	1 cut(s)	1227
BstUI	CGCG	2 cut(s)	1239, 1575
BstV1I	GCAGC	5 cut(s)	454, 638, 1079, 1153, 1629
BstX2I	RGATCY	1 cut(s)	244
BstYI	RGATCY	1 cut(s)	244
Bsu15I	ATCGAT	1 cut(s)	136
BsuI	GTATCC	1 cut(s)	833
BsuRI	GGCC	1 cut(s)	117
BsuTUI	ATCGAT	1 cut(s)	136
BtgI	CCRYGG	1 cut(s)	1290
BtrI	CACGTC	1 cut(s)	1465
BtsCI	GGATG	2 cut(s)	147, 973
BtsI	GCAGTG	2 cut(s)	156, 1032
BtsIMutI	CAGTG	4 cut(s)	156, 180, 1032, 1316
Cac8I	GCNNGC	2 cut(s)	798, 909
CciI	TCATGA	2 cut(s)	765, 1251
CfoI	GCGC	4 cut(s)	350, 458, 1239, 1503
Cfr13I	GGNCC	2 cut(s)	357, 423
Cfr9I	CCCGGG	1 cut(s)	1009
ClaI	ATCGAT	1 cut(s)	136
CseI	GACGC	1 cut(s)	1544
Csp6I	GTAC	2 cut(s)	1263, 1359
CspCI	CAANNNNNGTGG	2 cut(s)	553, 588
CviAII	CATG	9 cut(s)	620, 766, 908, 1054, 1252, 1291, 1498, 1552, 1622
CviQI	GTAC	2 cut(s)	1263, 1359
DdeI	CTNAG	5 cut(s)	801, 936, 1102, 1608, 1628
DinI	GGCGCC	2 cut(s)	349, 457
DpnI	GATC	6 cut(s)	54, 246, 750, 1154, 1219, 1626
DpnII	GATC	6 cut(s)	52, 244, 748, 1152, 1217, 1624
DriI	GACNNNNNGTC	1 cut(s)	683
EaeI	YGGCCR	1 cut(s)	115
Eam1104I	CTCTTC	3 cut(s)	254, 584, 1057
Eam1105I	GACNNNNNGTC	1 cut(s)	683
EarI	CTCTTC	3 cut(s)	254, 584, 1057
Ecl136II	GAGCTC	2 cut(s)	888, 1032
Eco130I	CCWWGG	1 cut(s)	1290
Eco24I	GRGCYC	2 cut(s)	890, 1034
Eco47I	GGWCC	2 cut(s)	357, 423
Eco53kI	GAGCTC	2 cut(s)	888, 1032
Eco88I	CYCGRG	1 cut(s)	1009
EcoICRI	GAGCTC	2 cut(s)	888, 1032
EcoO109I	RGGNCCY	1 cut(s)	423
EcoRII	CCWGG	3 cut(s)	1447, 1458, 1594
EcoT14I	CCWWGG	1 cut(s)	1290
EcoT22I	ATGCAT	1 cut(s)	973
EcoT38I	GRGCYC	2 cut(s)	890, 1034
EgeI	GGCGCC	2 cut(s)	349, 457
EheI	GGCGCC	2 cut(s)	349, 457
ErhI	CCWWGG	1 cut(s)	1290
FaeI	CATG	9 cut(s)	623, 769, 911, 1057, 1255, 1294, 1501, 1555, 1625
FalI	AAGNNNNNCTT	4 cut(s)	896, 928, 1054, 1086
FaqI	GGGAC	5 cut(s)	370, 436, 841, 1027, 1577
FatI	CATG	9 cut(s)	619, 765, 907, 1053, 1251, 1290, 1497, 1551, 1621
FauI	CCCGC	1 cut(s)	1232
FbaI	TGATCA	1 cut(s)	52
Fnu4HI	GCNGC	5 cut(s)	468, 627, 1068, 1142, 1618
FokI	GGATG	2 cut(s)	154, 980
FriOI	GRGCYC	2 cut(s)	890, 1034
Fsp4HI	GCNGC	5 cut(s)	468, 627, 1068, 1142, 1618
FspBI	CTAG	3 cut(s)	386, 1049, 1430
GlaI	GCGC	4 cut(s)	349, 457, 1238, 1502
GluI	GCNGC	5 cut(s)	468, 627, 1068, 1142, 1618
GsuI	CTGGAG	1 cut(s)	1549
HaeII	RGCGCY	2 cut(s)	351, 459
HaeIII	GGCC	1 cut(s)	117
HapII	CCGG	2 cut(s)	675, 1010
HgaI	GACGC	1 cut(s)	1544
HhaI	GCGC	4 cut(s)	350, 458, 1239, 1503
Hin1I	GRCGYC	2 cut(s)	348, 456
Hin1II	CATG	9 cut(s)	623, 769, 911, 1057, 1255, 1294, 1501, 1555, 1625
Hin6I	GCGC	4 cut(s)	348, 456, 1237, 1501
HinP1I	GCGC	4 cut(s)	348, 456, 1237, 1501
HincII	GTYRAC	1 cut(s)	45
HindII	GTYRAC	1 cut(s)	45
HinfI	GANTC	6 cut(s)	133, 149, 476, 993, 1433, 1578
HpaII	CCGG	2 cut(s)	675, 1010
HphI	GGTGA	3 cut(s)	598, 871, 1433
Hpy166II	GTNNAC	5 cut(s)	45, 1212, 1424, 1519, 1634
Hpy188I	TCNGA	8 cut(s)	52, 320, 594, 699, 1119, 1378, 1392, 1605
Hpy188III	TCNNGA	8 cut(s)	506, 667, 718, 752, 766, 891, 997, 1252
Hpy8I	GTNNAC	5 cut(s)	45, 1212, 1424, 1519, 1634
HpyAV	CCTTC	5 cut(s)	101, 729, 1099, 1493, 1558
HpyCH4III	ACNGT	7 cut(s)	361, 530, 726, 832, 1273, 1516, 1536
HpyCH4IV	ACGT	2 cut(s)	957, 1464
HpyCH4V	TGCA	9 cut(s)	287, 372, 392, 449, 470, 486, 971, 1025, 1247
HpyF10VI	GCNNNNNNNGC	4 cut(s)	347, 455, 464, 802
HpyF3I	CTNAG	5 cut(s)	801, 936, 1102, 1608, 1628
HpySE526I	ACGT	2 cut(s)	957, 1464
Hsp92I	GRCGYC	2 cut(s)	348, 456
Hsp92II	CATG	9 cut(s)	623, 769, 911, 1057, 1255, 1294, 1501, 1555, 1625
HspAI	GCGC	4 cut(s)	348, 456, 1237, 1501
KasI	GGCGCC	2 cut(s)	347, 455
Ksp22I	TGATCA	1 cut(s)	52
Kzo9I	GATC	6 cut(s)	52, 244, 748, 1152, 1217, 1624
LguI	GCTCTTC	2 cut(s)	584, 1057
LmnI	GCTCC	2 cut(s)	1416, 1452
Lsp1109I	GCAGC	5 cut(s)	454, 638, 1079, 1153, 1629
LweI	GCATC	7 cut(s)	68, 550, 759, 958, 1123, 1143, 1534
MaeI	CTAG	3 cut(s)	386, 1049, 1430
MaeII	ACGT	2 cut(s)	957, 1464
MaeIII	GTNAC	4 cut(s)	328, 877, 1001, 1443
MalI	GATC	6 cut(s)	54, 246, 750, 1154, 1219, 1626
MbiI	CCGCTC	1 cut(s)	1411
MboI	GATC	6 cut(s)	52, 244, 748, 1152, 1217, 1624
MboII	GAAGA	4 cut(s)	241, 254, 571, 1074
MflI	RGATCY	1 cut(s)	244
MhlI	GDGCHC	5 cut(s)	579, 674, 890, 1034, 1227
MlsI	TGGCCA	1 cut(s)	117
MluCI	AATT	7 cut(s)	322, 393, 410, 635, 894, 1035, 1232
MluNI	TGGCCA	1 cut(s)	117
Mly113I	GGCGCC	2 cut(s)	348, 456
MlyI	GAGTC	1 cut(s)	470
MmeI	TCCRAC	2 cut(s)	940, 1628
Mox20I	TGGCCA	1 cut(s)	117
Mph1103I	ATGCAT	1 cut(s)	973
MscI	TGGCCA	1 cut(s)	117
MseI	TTAA	4 cut(s)	20, 75, 405, 615
MslI	CAYNNNNRTG	2 cut(s)	1292, 1367
Msp20I	TGGCCA	1 cut(s)	117
MspI	CCGG	2 cut(s)	675, 1010
MspR9I	CCNGG	5 cut(s)	1010, 1011, 1449, 1460, 1596
Mva1269I	GAATGC	1 cut(s)	1249
MvaI	CCWGG	3 cut(s)	1449, 1460, 1596
MvnI	CGCG	2 cut(s)	1239, 1575
MwoI	GCNNNNNNNGC	4 cut(s)	347, 455, 464, 802
NarI	GGCGCC	2 cut(s)	348, 456
NciI	CCSGG	2 cut(s)	1010, 1011
NcoI	CCATGG	1 cut(s)	1290
NdeII	GATC	6 cut(s)	52, 244, 748, 1152, 1217, 1624
NlaIII	CATG	9 cut(s)	623, 769, 911, 1057, 1255, 1294, 1501, 1555, 1625
NlaIV	GGNNCC	5 cut(s)	349, 358, 424, 457, 1454
NmuCI	GTSAC	2 cut(s)	877, 1001
NsiI	ATGCAT	1 cut(s)	973
NspI	RCATGY	1 cut(s)	911
OliI	CACNNNNGTG	1 cut(s)	1292
PaeI	GCATGC	1 cut(s)	911
PagI	TCATGA	2 cut(s)	765, 1251
PciSI	GCTCTTC	2 cut(s)	584, 1057
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	1 cut(s)	1249
PfeI	GAWTC	5 cut(s)	133, 149, 993, 1433, 1578
PflMI	CCANNNNNTGG	1 cut(s)	124
PkrI	GCNGC	5 cut(s)	469, 628, 1069, 1143, 1619
PleI	GAGTC	1 cut(s)	470
PluTI	GGCGCC	2 cut(s)	351, 459
PpsI	GAGTC	1 cut(s)	470
PpuMI	RGGWCCY	1 cut(s)	423
Psp124BI	GAGCTC	2 cut(s)	890, 1034
Psp5II	RGGWCCY	1 cut(s)	423
Psp6I	CCWGG	3 cut(s)	1447, 1458, 1594
PspGI	CCWGG	3 cut(s)	1447, 1458, 1594
PspN4I	GGNNCC	5 cut(s)	349, 358, 424, 457, 1454
PspPI	GGNCC	2 cut(s)	357, 423
PspPPI	RGGWCCY	1 cut(s)	423
PsuI	RGATCY	1 cut(s)	244
RsaI	GTAC	2 cut(s)	1264, 1360
RsaNI	GTAC	2 cut(s)	1263, 1359
RseI	CAYNNNNRTG	2 cut(s)	1292, 1367
SacI	GAGCTC	2 cut(s)	890, 1034
SapI	GCTCTTC	2 cut(s)	584, 1057
SaqAI	TTAA	4 cut(s)	20, 75, 405, 615
SatI	GCNGC	5 cut(s)	468, 627, 1068, 1142, 1618
Sau3AI	GATC	6 cut(s)	52, 244, 748, 1152, 1217, 1624
Sau96I	GGNCC	2 cut(s)	357, 423
SchI	GAGTC	1 cut(s)	470
ScrFI	CCNGG	5 cut(s)	1010, 1011, 1449, 1460, 1596
SduI	GDGCHC	5 cut(s)	579, 674, 890, 1034, 1227
SfaNI	GCATC	7 cut(s)	68, 550, 759, 958, 1123, 1143, 1534
SfcI	CTRYAG	1 cut(s)	491
SfoI	GGCGCC	2 cut(s)	349, 457
SinI	GGWCC	2 cut(s)	357, 423
SmaI	CCCGGG	1 cut(s)	1011
SmiMI	CAYNNNNRTG	2 cut(s)	1292, 1367
SmlI	CTYRAG	3 cut(s)	667, 814, 889
SmoI	CTYRAG	3 cut(s)	667, 814, 889
SphI	GCATGC	1 cut(s)	911
Sse9I	AATT	7 cut(s)	322, 393, 410, 635, 894, 1035, 1232
SsiI	CCGC	3 cut(s)	1239, 1409, 1575
SspDI	GGCGCC	2 cut(s)	347, 455
SspI	AATATT	1 cut(s)	279
SspMI	CTAG	3 cut(s)	386, 1049, 1430
SstI	GAGCTC	2 cut(s)	890, 1034
StyD4I	CCNGG	5 cut(s)	1008, 1009, 1447, 1458, 1594
StyI	CCWWGG	1 cut(s)	1290
TaaI	ACNGT	7 cut(s)	361, 530, 726, 832, 1273, 1516, 1536
TaiI	ACGT	2 cut(s)	960, 1467
TaqI	TCGA	5 cut(s)	136, 743, 751, 1416, 1486
TasI	AATT	7 cut(s)	322, 393, 410, 635, 894, 1035, 1232
TatI	WGTACW	1 cut(s)	1262
TfiI	GAWTC	5 cut(s)	133, 149, 993, 1433, 1578
Tru1I	TTAA	4 cut(s)	20, 75, 405, 615
Tru9I	TTAA	4 cut(s)	20, 75, 405, 615
TscAI	CASTG	4 cut(s)	163, 187, 1032, 1323
TseFI	GTSAC	2 cut(s)	877, 1001
TseI	GCWGC	5 cut(s)	467, 626, 1067, 1141, 1617
Tsp45I	GTSAC	2 cut(s)	877, 1001
TspDTI	ATGAA	5 cut(s)	158, 636, 777, 1425, 1540
TspGWI	ACGGA	1 cut(s)	1525
TspMI	CCCGGG	1 cut(s)	1009
TspRI	CASTG	4 cut(s)	163, 187, 1032, 1323
Van91I	CCANNNNNTGG	1 cut(s)	124
VpaK11BI	GGWCC	2 cut(s)	357, 423
XapI	RAATTY	1 cut(s)	322
XceI	RCATGY	1 cut(s)	911
XmaI	CCCGGG	1 cut(s)	1009
XspI	CTAG	3 cut(s)	386, 1049, 1430
Zsp2I	ATGCAT	1 cut(s)	973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.