Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002006.1

Orthogroup ID

OG0001413

Physical Location & Seq

Genomic Coordinates Forward (+)

44729 .. 49356

Gene Structure 4628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002006.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

atggcgttggatttgagctcaatggcatcggaatcggtgggaatgttgaacacttccgatcatacttcggttgtgtccatgaacctctttgtggcgctgctttgcgcttgcatattacttggacatttgctggaggagagtagatggatgaatgagtccattacggcccttgcgattggattgtgcactgggattgttatattgctgaccacaaaagggaaaagctctcatttgttagtgtttagtgaagatcttttcttcatctatctccttcctcctatcattttcaatgccgggttccaagtgaagaagaagcaattttttcgtaacttcatgacaatcatgatgtttggggctattggcactctcatatcctttgccaccatatccttaggtgctatgcactttttccgcaagttcagcattggtgacctcaacatcggagattatctcgcacttggagcaatattttctgcaaccgattctgtttgcaccttgcaggtgcttaatcaagatgagacacctttgttatacagtctggtttttggggaaggtgtggtcaatgatgctacatcagtcgtgcttttcaatgcaatccagagctttgacctctcccacatcaatacaagcactgttatgcagtttattggaaactttttatatctatttgctacaagtacaatgctgggagttgtagctggactacttagtgcatatgtaattagaaagctctattttggcagacactcaactgatcgtgaagttgctcttatgatcctcatggcttacctttcgtacatgctcgctgaactgttttatttaagtgccattctcactgtgttcttttgtggaattgttatgtctcactacacatggcataatgtgactgaaagttcaagagtgacaactaagcatgcttttgccactctatcatttgttgctgagatttttatctttctttacgttggtatggacgccttagacattgacaagtggagatttgtgagcgatagtccgggaaaatccttagcggtgagttcaatactcttggcactggttatggttggaagagcagccttcgttttccccttatctttcttatccaacttgaccaagaaatctccacaagacaagatccatttgaagcaacaagttacaatttggtgggctggtcttatgcgtggcgctgtttctatggcacttgcttataatcagtttactaggtctggccatactgacctgcgcgcaaatgcatacatgatcaccagcactatcacagttgttcttttcagcacagtggtgtttggtttgatgactaaacccctagtgaggatcttgcttcctacatcaaaacacttcactagtatgacatcttctgaaccttctagtcctaaatccttcattgtgccactgctcaccaacgggcaagattcagaggccaacatcaggtccgcggacataccccgccctactagtttaagaatgcttctaagcactccgtctcacactgtccaccattattggcgaaaatttgacaatgccttcatgaggcctgtttttggcgggcggggttttgtacccttcgttccaggatcacctgttgaacaaaatggtcatcaatggaattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0006950 GO:0006970 GO:0008150 GO:0008324 GO:0009628 GO:0009651 GO:0009987 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0090333 GO:0098588 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0098805 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

542

Amino Acids

60.08

Weight (kDa)

8.67

Isoelectric Point (pI)

40.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05030 AT3G05030 AT3G05030 AT3G05030 AT5G27150
fragaria_vesca	FvH4_4g17120 FvH4_4g17120 FvH4_6g04140
malus_domestica	MD00G1051300.v1.1 MD12G1232400.v1.1 MD13G1174300.v1.1 MD16G1175800.v1.1
prunus_persica	Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.6G335800_v2.0.a1
pyrus_communis	pycom12g21480 pycom13g14990 pycom16g14730
rosa_chinensis	RchiOBHm_Chr3g0452721 RchiOBHm_Chr4g0420901 RchiOBHm_Chr5g0080441
rosa_laevigata	RLG00000007726 RLG00000025572
rosa_multiflora	Rmu_sc0002006.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363300 Rroxscaffold_6G00429730
rosa_rugosa	Rorug02G0642900 Rorug02G0642900 Rorug04G0166900 Rorug04G0167000 Rorug04G0167100
rosa_samantha	Rh3AG045100 Rh3BG047600 Rh3CG046100 Rh3DG046400 Rh4BG231400 Rh4DG226500
rosa_wichuraiana	Rw3G003530 Rw4G019760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1209
AarI	CACCTGC	1 cut(s)	490
Acc36I	ACCTGC	2 cut(s)	490, 1248
AccII	CGCG	2 cut(s)	1245, 1454
AciI	CCGC	7 cut(s)	412, 1031, 1452, 1454, 1465, 1563, 1567
AclWI	GGATC	4 cut(s)	769, 1129, 1340, 1600
AcoI	YGGCCR	1 cut(s)	1228
AcsI	RAATTY	1 cut(s)	1529
AcyI	GRCGYC	1 cut(s)	975
AfaI	GTAC	3 cut(s)	679, 797, 1578
AfiI	CCNNNNNNNGG	6 cut(s)	91, 216, 1329, 1446, 1548, 1559
AgsI	TTSAA	7 cut(s)	49, 289, 589, 897, 1041, 1144, 1604
AhlI	ACTAGT	2 cut(s)	1361, 1472
AjnI	CCWGG	1 cut(s)	1588
AleI	CACNNNNGTG	1 cut(s)	1298
AluBI	AGCT	5 cut(s)	18, 225, 603, 698, 730
AluI	AGCT	5 cut(s)	18, 225, 603, 698, 730
Alw21I	GWGCWC	2 cut(s)	20, 188
Alw26I	GTCTC	3 cut(s)	512, 867, 1506
Alw44I	GTGCAC	1 cut(s)	184
AlwI	GGATC	4 cut(s)	769, 1129, 1340, 1600
AoxI	GGCC	4 cut(s)	165, 1228, 1437, 1550
ApaLI	GTGCAC	1 cut(s)	184
ApeKI	GCWGC	2 cut(s)	97, 1073
ApoI	RAATTY	1 cut(s)	1529
AspLEI	GCGC	5 cut(s)	97, 107, 1187, 1245, 1247
AspS9I	GGNCC	2 cut(s)	166, 1449
AsuC2I	CCSGG	2 cut(s)	295, 1017
AsuHPI	GGTGA	5 cut(s)	440, 1045, 1255, 1408, 1587
AvaII	GGWCC	1 cut(s)	1449
AxyI	CCTNAGG	1 cut(s)	391
BaeGI	GKGCMC	1 cut(s)	188
BalI	TGGCCA	1 cut(s)	1230
BanII	GRGCYC	1 cut(s)	20
BarI	GAAGNNNNNNTAC	2 cut(s)	1357, 1389
Bbv12I	GWGCWC	2 cut(s)	20, 188
BbvI	GCAGC	2 cut(s)	84, 1085
BccI	CCATC	1 cut(s)	138
BceAI	ACGGC	1 cut(s)	180
BcgI	CGANNNNNNTGC	4 cut(s)	15, 49, 305, 339
BciT130I	CCWGG	1 cut(s)	1590
BclI	TGATCA	1 cut(s)	1260
BcnI	CCSGG	2 cut(s)	295, 1017
BcoDI	GTCTC	3 cut(s)	512, 867, 1506
BcuI	ACTAGT	2 cut(s)	1361, 1472
BfaI	CTAG	5 cut(s)	1221, 1325, 1362, 1386, 1473
BfoI	RGCGCY	2 cut(s)	98, 1188
BfuAI	ACCTGC	2 cut(s)	490, 1248
BglII	AGATCT	1 cut(s)	250
BisI	GCNGC	2 cut(s)	98, 1074
BlsI	GCNGC	2 cut(s)	99, 1075
Bme1390I	CCNGG	3 cut(s)	295, 1017, 1590
Bme18I	GGWCC	1 cut(s)	1449
BmgT120I	GGNCC	2 cut(s)	166, 1449
BmiI	GGNNCC	1 cut(s)	299
BmrFI	CCNGG	3 cut(s)	295, 1017, 1590
BmrI	ACTGGG	1 cut(s)	198
BmsI	GCATC	2 cut(s)	35, 556
BmuI	ACTGGG	1 cut(s)	198
BplI	GAGNNNNNCTC	2 cut(s)	435, 467
BpmI	CTGGAG	1 cut(s)	152
Bpu10I	CCTNAGC	1 cut(s)	1027
BpuMI	CCSGG	2 cut(s)	295, 1017
BsaBI	GATNNNNATC	1 cut(s)	950
BsaHI	GRCGYC	1 cut(s)	975
BsaJI	CCNNGG	1 cut(s)	1452
Bsc4I	CCNNNNNNNGG	6 cut(s)	91, 216, 1329, 1446, 1548, 1559
Bse1I	ACTGG	2 cut(s)	193, 1059
Bse21I	CCTNAGG	1 cut(s)	391
Bse8I	GATNNNNATC	1 cut(s)	950
BseBI	CCWGG	1 cut(s)	1590
BseDI	CCNNGG	1 cut(s)	1452
BseGI	GGATG	1 cut(s)	153
BseJI	GATNNNNATC	1 cut(s)	950
BseLI	CCNNNNNNNGG	6 cut(s)	91, 216, 1329, 1446, 1548, 1559
BseMII	CTCAG	1 cut(s)	933
BseNI	ACTGG	2 cut(s)	193, 1059
BsePI	GCGCGC	1 cut(s)	1243
BseRI	GAGGAG	1 cut(s)	149
BseSI	GKGCMC	1 cut(s)	188
BseXI	GCAGC	2 cut(s)	84, 1085
BseYI	CCCAGC	1 cut(s)	685
Bsh1236I	CGCG	2 cut(s)	1245, 1454
BshFI	GGCC	4 cut(s)	167, 1230, 1439, 1552
BsiHKAI	GWGCWC	2 cut(s)	20, 188
BsiSI	CCGG	2 cut(s)	294, 1016
BslI	CCNNNNNNNGG	6 cut(s)	91, 216, 1329, 1446, 1548, 1559
BsmAI	GTCTC	3 cut(s)	512, 867, 1506
BsmBI	CGTCTC	1 cut(s)	1506
BsmI	GAATGC	1 cut(s)	1488
BsnI	GGCC	4 cut(s)	167, 1230, 1439, 1552
Bsp1286I	GDGCHC	2 cut(s)	20, 188
Bsp143I	GATC	8 cut(s)	58, 250, 754, 774, 1134, 1260, 1332, 1592
BspACI	CCGC	7 cut(s)	412, 1031, 1452, 1454, 1465, 1563, 1567
BspANI	GGCC	4 cut(s)	167, 1230, 1439, 1552
BspCNI	CTCAG	1 cut(s)	934
BspFNI	CGCG	2 cut(s)	1245, 1454
BspHI	TCATGA	3 cut(s)	333, 342, 1545
BspLI	GGNNCC	1 cut(s)	299
BspMI	ACCTGC	2 cut(s)	490, 1248
BspPI	GGATC	4 cut(s)	769, 1129, 1340, 1600
BspQI	GCTCTTC	1 cut(s)	1063
BsrI	ACTGG	2 cut(s)	193, 1059
BssECI	CCNNGG	1 cut(s)	1452
BssHII	GCGCGC	1 cut(s)	1243
BssMI	GATC	8 cut(s)	58, 250, 754, 774, 1134, 1260, 1332, 1592
BssNI	GRCGYC	1 cut(s)	975
Bst2UI	CCWGG	1 cut(s)	1590
Bst4CI	ACNGT	7 cut(s)	536, 634, 813, 838, 1279, 1297, 1510
Bst6I	CTCTTC	1 cut(s)	1063
BstACI	GRCGYC	1 cut(s)	975
BstC8I	GCNNGC	5 cut(s)	109, 804, 915, 1245, 1565
BstDEI	CTNAG	7 cut(s)	391, 707, 909, 942, 979, 1027, 1490
BstDSI	CCRYGG	1 cut(s)	1452
BstEII	GGTNACC	1 cut(s)	428
BstENI	CCTNNNNNAGG	1 cut(s)	1546
BstF5I	GGATG	1 cut(s)	153
BstFNI	CGCG	2 cut(s)	1245, 1454
BstH2I	RGCGCY	2 cut(s)	98, 1188
BstHHI	GCGC	5 cut(s)	97, 107, 1187, 1245, 1247
BstKTI	GATC	8 cut(s)	61, 253, 757, 777, 1137, 1263, 1335, 1595
BstMAI	GTCTC	3 cut(s)	512, 867, 1506
BstMBI	GATC	8 cut(s)	58, 250, 754, 774, 1134, 1260, 1332, 1592
BstMWI	GCNNNNNNNGC	2 cut(s)	420, 461
BstNI	CCWGG	1 cut(s)	1590
BstNSI	RCATGY	2 cut(s)	802, 917
BstPI	GGTNACC	1 cut(s)	428
BstSCI	CCNGG	3 cut(s)	293, 1015, 1588
BstSLI	GKGCMC	1 cut(s)	188
BstUI	CGCG	2 cut(s)	1245, 1454
BstV1I	GCAGC	2 cut(s)	84, 1085
BstX2I	RGATCY	3 cut(s)	250, 1134, 1332
BstYI	RGATCY	3 cut(s)	250, 1134, 1332
Bsu36I	CCTNAGG	1 cut(s)	391
BsuRI	GGCC	4 cut(s)	167, 1230, 1439, 1552
BtgI	CCRYGG	1 cut(s)	1452
BtsCI	GGATG	1 cut(s)	153
BtsI	GCAGTG	1 cut(s)	1409
BtsIMutI	CAGTG	7 cut(s)	186, 630, 834, 1052, 1302, 1409, 1506
BveI	ACCTGC	2 cut(s)	490, 1248
Cac8I	GCNNGC	5 cut(s)	109, 804, 915, 1245, 1565
CciI	TCATGA	3 cut(s)	333, 342, 1545
CfoI	GCGC	5 cut(s)	97, 107, 1187, 1245, 1247
Cfr13I	GGNCC	2 cut(s)	166, 1449
Cfr42I	CCGCGG	1 cut(s)	1455
CseI	GACGC	1 cut(s)	983
Csp6I	GTAC	3 cut(s)	678, 796, 1577
CspCI	CAANNNNNGTGG	2 cut(s)	1502, 1537
CviAII	CATG	9 cut(s)	79, 334, 343, 781, 799, 873, 914, 1258, 1546
CviQI	GTAC	3 cut(s)	678, 796, 1577
DdeI	CTNAG	7 cut(s)	391, 707, 909, 942, 979, 1027, 1490
DpnI	GATC	8 cut(s)	60, 252, 756, 776, 1136, 1262, 1334, 1594
DpnII	GATC	8 cut(s)	58, 250, 754, 774, 1134, 1260, 1332, 1592
EaeI	YGGCCR	1 cut(s)	1228
Eam1104I	CTCTTC	1 cut(s)	1063
EarI	CTCTTC	1 cut(s)	1063
Ecl136II	GAGCTC	1 cut(s)	18
Eco147I	AGGCCT	1 cut(s)	1552
Eco24I	GRGCYC	1 cut(s)	20
Eco47I	GGWCC	1 cut(s)	1449
Eco53kI	GAGCTC	1 cut(s)	18
Eco81I	CCTNAGG	1 cut(s)	391
Eco91I	GGTNACC	1 cut(s)	428
EcoICRI	GAGCTC	1 cut(s)	18
EcoNI	CCTNNNNNAGG	1 cut(s)	1546
EcoO65I	GGTNACC	1 cut(s)	428
EcoRII	CCWGG	1 cut(s)	1588
EcoT22I	ATGCAT	1 cut(s)	1255
EcoT38I	GRGCYC	1 cut(s)	20
Esp3I	CGTCTC	1 cut(s)	1506
FaeI	CATG	9 cut(s)	82, 337, 346, 784, 802, 876, 917, 1261, 1549
FalI	AAGNNNNNCTT	2 cut(s)	753, 785
FatI	CATG	9 cut(s)	78, 333, 342, 780, 798, 872, 913, 1257, 1545
FauI	CCCGC	3 cut(s)	1472, 1556, 1560
FauNDI	CATATG	1 cut(s)	715
FbaI	TGATCA	1 cut(s)	1260
Fnu4HI	GCNGC	2 cut(s)	98, 1074
FokI	GGATG	1 cut(s)	160
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	2 cut(s)	98, 1074
FspBI	CTAG	5 cut(s)	1221, 1325, 1362, 1386, 1473
GlaI	GCGC	5 cut(s)	96, 106, 1186, 1244, 1246
GluI	GCNGC	2 cut(s)	98, 1074
GsaI	CCCAGC	1 cut(s)	689
GsuI	CTGGAG	1 cut(s)	152
HaeII	RGCGCY	2 cut(s)	98, 1188
HaeIII	GGCC	4 cut(s)	167, 1230, 1439, 1552
HapII	CCGG	2 cut(s)	294, 1016
HgaI	GACGC	1 cut(s)	983
HhaI	GCGC	5 cut(s)	97, 107, 1187, 1245, 1247
Hin1I	GRCGYC	1 cut(s)	975
Hin1II	CATG	9 cut(s)	82, 337, 346, 784, 802, 876, 917, 1261, 1549
Hin6I	GCGC	5 cut(s)	95, 105, 1185, 1243, 1245
HinP1I	GCGC	5 cut(s)	95, 105, 1185, 1243, 1245
HinfI	GANTC	4 cut(s)	32, 155, 482, 1430
HpaII	CCGG	2 cut(s)	294, 1016
HphI	GGTGA	5 cut(s)	440, 1045, 1255, 1408, 1587
Hpy166II	GTNNAC	3 cut(s)	186, 1218, 1513
Hpy188I	TCNGA	5 cut(s)	31, 58, 443, 1378, 1435
Hpy188III	TCNNGA	7 cut(s)	334, 343, 512, 598, 758, 897, 1546
Hpy8I	GTNNAC	3 cut(s)	186, 1218, 1513
HpyAV	CCTTC	7 cut(s)	281, 545, 1087, 1392, 1408, 1552, 1591
HpyCH4III	ACNGT	7 cut(s)	536, 634, 813, 838, 1279, 1297, 1510
HpyCH4IV	ACGT	1 cut(s)	963
HpyF10VI	GCNNNNNNNGC	2 cut(s)	420, 461
HpyF3I	CTNAG	7 cut(s)	391, 707, 909, 942, 979, 1027, 1490
HpySE526I	ACGT	1 cut(s)	963
Hsp92I	GRCGYC	1 cut(s)	975
Hsp92II	CATG	9 cut(s)	82, 337, 346, 784, 802, 876, 917, 1261, 1549
HspAI	GCGC	5 cut(s)	95, 105, 1185, 1243, 1245
Ksp22I	TGATCA	1 cut(s)	1260
KspI	CCGCGG	1 cut(s)	1455
Kzo9I	GATC	8 cut(s)	58, 250, 754, 774, 1134, 1260, 1332, 1592
LguI	GCTCTTC	1 cut(s)	1063
LmnI	GCTCC	1 cut(s)	461
Lsp1109I	GCAGC	2 cut(s)	84, 1085
LweI	GCATC	2 cut(s)	35, 556
MaeI	CTAG	5 cut(s)	1221, 1325, 1362, 1386, 1473
MaeII	ACGT	1 cut(s)	963
MaeIII	GTNAC	5 cut(s)	326, 428, 883, 901, 1153
MalI	GATC	8 cut(s)	60, 252, 756, 776, 1136, 1262, 1334, 1594
MboI	GATC	8 cut(s)	58, 250, 754, 774, 1134, 1260, 1332, 1592
MboII	GAAGA	6 cut(s)	250, 260, 319, 322, 1080, 1365
MflI	RGATCY	3 cut(s)	250, 1134, 1332
MhlI	GDGCHC	2 cut(s)	20, 188
MlsI	TGGCCA	1 cut(s)	1230
MluCI	AATT	6 cut(s)	317, 720, 852, 1158, 1529, 1624
MluNI	TGGCCA	1 cut(s)	1230
MlyI	GAGTC	1 cut(s)	164
MmeI	TCCRAC	2 cut(s)	1045, 1128
MnlI	CCTC	9 cut(s)	95, 127, 285, 443, 620, 788, 1323, 1429, 1542
Mox20I	TGGCCA	1 cut(s)	1230
Mph1103I	ATGCAT	1 cut(s)	1255
MscI	TGGCCA	1 cut(s)	1230
MseI	TTAA	3 cut(s)	507, 821, 1478
MslI	CAYNNNNRTG	3 cut(s)	635, 1298, 1364
Msp20I	TGGCCA	1 cut(s)	1230
MspA1I	CMGCKG	1 cut(s)	1454
MspI	CCGG	2 cut(s)	294, 1016
MspR9I	CCNGG	3 cut(s)	295, 1017, 1590
Mva1269I	GAATGC	1 cut(s)	1488
MvaI	CCWGG	1 cut(s)	1590
MvnI	CGCG	2 cut(s)	1245, 1454
MwoI	GCNNNNNNNGC	2 cut(s)	420, 461
NciI	CCSGG	2 cut(s)	295, 1017
NdeI	CATATG	1 cut(s)	715
NdeII	GATC	8 cut(s)	58, 250, 754, 774, 1134, 1260, 1332, 1592
NlaIII	CATG	9 cut(s)	82, 337, 346, 784, 802, 876, 917, 1261, 1549
NlaIV	GGNNCC	1 cut(s)	299
NmuCI	GTSAC	3 cut(s)	428, 883, 901
NsiI	ATGCAT	1 cut(s)	1255
NspI	RCATGY	2 cut(s)	802, 917
OliI	CACNNNNGTG	1 cut(s)	1298
PaeI	GCATGC	1 cut(s)	917
PagI	TCATGA	3 cut(s)	333, 342, 1545
PaqCI	CACCTGC	1 cut(s)	490
PauI	GCGCGC	1 cut(s)	1243
PceI	AGGCCT	1 cut(s)	1552
PciSI	GCTCTTC	1 cut(s)	1063
PcsI	WCGNNNNNNNCGW	1 cut(s)	170
PctI	GAATGC	1 cut(s)	1488
PfeI	GAWTC	3 cut(s)	32, 482, 1430
PfoI	TCCNGGA	2 cut(s)	1015, 1588
PkrI	GCNGC	2 cut(s)	99, 1075
PleI	GAGTC	1 cut(s)	163
PpsI	GAGTC	1 cut(s)	163
PsiI	TTATAA	1 cut(s)	1209
Psp124BI	GAGCTC	1 cut(s)	20
Psp6I	CCWGG	1 cut(s)	1588
PspEI	GGTNACC	1 cut(s)	428
PspFI	CCCAGC	1 cut(s)	685
PspGI	CCWGG	1 cut(s)	1588
PspN4I	GGNNCC	1 cut(s)	299
PspPI	GGNCC	2 cut(s)	166, 1449
PsrI	GAACNNNNNNTAC	2 cut(s)	1569, 1601
PsuI	RGATCY	3 cut(s)	250, 1134, 1332
PteI	GCGCGC	1 cut(s)	1243
RsaI	GTAC	3 cut(s)	679, 797, 1578
RsaNI	GTAC	3 cut(s)	678, 796, 1577
RseI	CAYNNNNRTG	3 cut(s)	635, 1298, 1364
SacI	GAGCTC	1 cut(s)	20
SacII	CCGCGG	1 cut(s)	1455
SapI	GCTCTTC	1 cut(s)	1063
SaqAI	TTAA	3 cut(s)	507, 821, 1478
SatI	GCNGC	2 cut(s)	98, 1074
Sau3AI	GATC	8 cut(s)	58, 250, 754, 774, 1134, 1260, 1332, 1592
Sau96I	GGNCC	2 cut(s)	166, 1449
SchI	GAGTC	1 cut(s)	164
ScrFI	CCNGG	3 cut(s)	295, 1017, 1590
SduI	GDGCHC	2 cut(s)	20, 188
SfaNI	GCATC	2 cut(s)	35, 556
Sfr303I	CCGCGG	1 cut(s)	1455
SgrBI	CCGCGG	1 cut(s)	1455
SinI	GGWCC	1 cut(s)	1449
SmiMI	CAYNNNNRTG	3 cut(s)	635, 1298, 1364
SpeI	ACTAGT	2 cut(s)	1361, 1472
SphI	GCATGC	1 cut(s)	917
Sse9I	AATT	6 cut(s)	317, 720, 852, 1158, 1529, 1624
SseBI	AGGCCT	1 cut(s)	1552
SsiI	CCGC	7 cut(s)	412, 1031, 1452, 1454, 1465, 1563, 1567
SspI	AATATT	1 cut(s)	468
SspMI	CTAG	5 cut(s)	1221, 1325, 1362, 1386, 1473
SstI	GAGCTC	1 cut(s)	20
StuI	AGGCCT	1 cut(s)	1552
StyD4I	CCNGG	3 cut(s)	293, 1015, 1588
TaaI	ACNGT	7 cut(s)	536, 634, 813, 838, 1279, 1297, 1510
TaiI	ACGT	1 cut(s)	966
TasI	AATT	6 cut(s)	317, 720, 852, 1158, 1529, 1624
TatI	WGTACW	1 cut(s)	677
TfiI	GAWTC	3 cut(s)	32, 482, 1430
Tru1I	TTAA	3 cut(s)	507, 821, 1478
Tru9I	TTAA	3 cut(s)	507, 821, 1478
TscAI	CASTG	7 cut(s)	193, 637, 841, 1059, 1302, 1416, 1513
TseFI	GTSAC	3 cut(s)	428, 883, 901
TseI	GCWGC	2 cut(s)	97, 1073
Tsp45I	GTSAC	3 cut(s)	428, 883, 901
TspDTI	ATGAA	6 cut(s)	95, 164, 250, 322, 1390, 1534
TspGWI	ACGGA	1 cut(s)	1488
TspRI	CASTG	7 cut(s)	193, 637, 841, 1059, 1302, 1416, 1513
VneI	GTGCAC	1 cut(s)	184
VpaK11BI	GGWCC	1 cut(s)	1449
XagI	CCTNNNNNAGG	1 cut(s)	1546
XapI	RAATTY	1 cut(s)	1529
XceI	RCATGY	2 cut(s)	802, 917
XspI	CTAG	5 cut(s)	1221, 1325, 1362, 1386, 1473
Zsp2I	ATGCAT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.