Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0001413

Physical Location & Seq

Genomic Coordinates Forward (+)

10789915 .. 10793443

Gene Structure 3529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g14730.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGCGGTCGATGCGAGCTCAATTGCAACGGAATCAATGAGAATTCTGATGGCCTCCGACCACACATCAGTGGTTTCGATGAACCTTTTCGTGGCGCTTCTCTGCGCTTGTATTCTACTCGGTCATTTGCTGGAAGAAAGTCGATGGATGAATGAGTCCATCACAGCCCTTGTAATTGGACTGTGCACAGGAGTTGTAATTTTGCTCACAACCGGAGGAAAAAGCTCACGTTTGTTAGTGTTTAGTGAAGATCGATCTTCTTTATATATCTGCTTCCGCCGATCATTTTTAATGCCGGGTAAGTTCCAGGTAAAGAAGAAGCAATTTTTTCGTAATTTCATAACTATCATGACGTTTGGTGCTGTTGGAACTCTCATATCCTTTGCCATCATATCGTTAGGTGCAATGCACTTTTTTCACAAGTTCAGTGTCGGTTCCCTCAAGATTGGAGATTATCTTGCACTTGGCGCGATATTTTCTGCAACCGATTCTGTTTGCACCTTACAGGTGCTGAATCAGGATGAAACGCCTTTGTTGTACAGCCTGGTTTTTGGGGAAGGTGTCGTTAATGATGCTACATCAATAGTGCTTTTCAATGCAATCCAGAGGATCGATCTCTCTCACATCAATACAAGCACTGCTTTGCAATTTTTTGGAAACTTTTTATATTTGTTTGTTACAAGTACAATCCTGGGAATCGTAGCTGGACTACTAAGTGCATTTATCATCAAGAAGCTCTACTTCGGCAGGCACTCAACTGATCGCGAAGTAGCTCTTATGATACTCATGGCTTACCTGTCATACATGCTGTCTGAACTATGTTATTTGAGTGCCATTCTCACTGTGTTCTTTTGCGGAATTGTTATGTCTCACTACACATGGCATAACGTGACTGAAAGTTCACGAGTGACAACTAAGCATACTTTTGCCACTCTCTCGTTTGTGGCGGAGATCTTTATCTTTCTTTATGTCGGCATGGATACCCTGGACATTGACAAGTGGAGATTTGTGAGTGATAGCCCTGGAAAATCCATGGCGGTGAGTTCGATACTGTTGGTACTCGTTCTGATTGGAAGAGCAGCCTTTGTTTTTCCCTTGTCTTTCTTATCCAACTTGACTAAGAAATCTCCACAAGACAAGCTTAGTTTAAAGCAGCAAGTTACAGTTTGGTGGGCGGGGCTTATGCGTGGCTCTGTTTCAATGGCACTTGCTTATAATCAGTTTAATAGGTCTGGCCATACGGACTTGCGTGCGAATGCGATCATGATCACCAGCACCATCACAGTTGTTCTTTTCAGCACAGTGGTTTTTGGTTTGATGACCAAACCGCTTGTGAGAATCTTGCTTCCTGTCTCAAAACACGTCTCGAGTATGATATCTTCTGAACCGTCTAGTCCAAAATCAATCGTTGTGCCACTACTCGGCAATGGCCAAGATTCAGAAGCGAACTGTGGGGTGGAAGATTCAGAGGCAAACATAGGACCCACGGACATACCCCGTCCAACTAGTTTACGAATGCTCTTAAGCTCTCCTTCTCACACCGTCCACCATTACTGGCGAAGATTTGATAATGCTTTCATGCGGCCTGTTTTTGGCGGGCGGGGTTTTGTGCCTTTCGTTCCAGGCTCACCCGTTGAAGAAATTGGAAATCAATGGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0006950 GO:0006970 GO:0008150 GO:0008324 GO:0009628 GO:0009651 GO:0009987 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0090333 GO:0098588 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0098805 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

554

Amino Acids

61.04

Weight (kDa)

8.81

Isoelectric Point (pI)

45.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05030 AT3G05030 AT3G05030 AT3G05030 AT5G27150
fragaria_vesca	FvH4_4g17120 FvH4_4g17120 FvH4_6g04140
malus_domestica	MD00G1051300.v1.1 MD12G1232400.v1.1 MD13G1174300.v1.1 MD16G1175800.v1.1
prunus_persica	Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.6G335800_v2.0.a1
pyrus_communis	pycom12g21480 pycom13g14990 pycom16g14730
rosa_chinensis	RchiOBHm_Chr3g0452721 RchiOBHm_Chr4g0420901 RchiOBHm_Chr5g0080441
rosa_laevigata	RLG00000007726 RLG00000025572
rosa_multiflora	Rmu_sc0002006.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363300 Rroxscaffold_6G00429730
rosa_rugosa	Rorug02G0642900 Rorug02G0642900 Rorug04G0166900 Rorug04G0167000 Rorug04G0167100
rosa_samantha	Rh3AG045100 Rh3BG047600 Rh3CG046100 Rh3DG046400 Rh4BG231400 Rh4DG226500
rosa_wichuraiana	Rw3G003530 Rw4G019760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1215
AccII	CGCG	2 cut(s)	470, 765
AclWI	GGATC	1 cut(s)	617
AcoI	YGGCCR	2 cut(s)	1234, 1429
AcsI	RAATTY	1 cut(s)	42
AfaI	GTAC	3 cut(s)	539, 685, 1059
AfiI	CCNNNNNNNGG	3 cut(s)	91, 1421, 1592
AflII	CTTAAG	1 cut(s)	1522
AflIII	ACRYGT	1 cut(s)	1360
AgsI	TTSAA	3 cut(s)	595, 1200, 1637
AhlI	ACTAGT	1 cut(s)	1505
AjiI	CACGTC	1 cut(s)	1363
AjnI	CCWGG	6 cut(s)	306, 543, 690, 984, 1021, 1621
AleI	CACNNNNGTG	1 cut(s)	68
AluBI	AGCT	7 cut(s)	18, 225, 704, 736, 773, 1141, 1527
AluI	AGCT	7 cut(s)	18, 225, 704, 736, 773, 1141, 1527
Alw21I	GWGCWC	2 cut(s)	20, 188
Alw26I	GTCTC	3 cut(s)	873, 1357, 1369
Alw44I	GTGCAC	1 cut(s)	184
AlwI	GGATC	1 cut(s)	617
AlwNI	CAGNNNCTG	1 cut(s)	511
Ama87I	CYCGRG	1 cut(s)	1366
AoxI	GGCC	4 cut(s)	51, 1234, 1429, 1583
ApaLI	GTGCAC	1 cut(s)	184
ApeKI	GCWGC	2 cut(s)	1079, 1153
ApoI	RAATTY	1 cut(s)	42
Asp700I	GAANNNNTTC	1 cut(s)	86
AspLEI	GCGC	3 cut(s)	97, 107, 470
AspS9I	GGNCC	1 cut(s)	1481
AsuC2I	CCSGG	1 cut(s)	297
AsuHPI	GGTGA	3 cut(s)	1051, 1261, 1620
AvaI	CYCGRG	1 cut(s)	1366
AvaII	GGWCC	1 cut(s)	1481
BaeGI	GKGCMC	1 cut(s)	188
BalI	TGGCCA	2 cut(s)	1236, 1431
BanII	GRGCYC	1 cut(s)	20
BarI	GAAGNNNNNNTAC	2 cut(s)	1363, 1395
BauI	CACGAG	1 cut(s)	903
Bbv12I	GWGCWC	2 cut(s)	20, 188
BbvI	GCAGC	2 cut(s)	1091, 1165
BccI	CCATC	5 cut(s)	43, 138, 167, 395, 1286
BcgI	CGANNNNNNTGC	2 cut(s)	311, 345
BciT130I	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
BciVI	GTATCC	1 cut(s)	973
BclI	TGATCA	1 cut(s)	1266
BcnI	CCSGG	1 cut(s)	297
BcoDI	GTCTC	3 cut(s)	873, 1357, 1369
BcuI	ACTAGT	1 cut(s)	1505
BfaI	CTAG	2 cut(s)	1392, 1506
BfoI	RGCGCY	1 cut(s)	98
BfrI	CTTAAG	1 cut(s)	1522
BfuI	GTATCC	1 cut(s)	973
BglII	AGATCT	1 cut(s)	951
BisI	GCNGC	3 cut(s)	1080, 1154, 1583
BlsI	GCNGC	3 cut(s)	1081, 1155, 1584
Bme1390I	CCNGG	7 cut(s)	297, 308, 545, 692, 986, 1023, 1623
Bme18I	GGWCC	1 cut(s)	1481
BmeT110I	CYCGRG	1 cut(s)	1366
BmgBI	CACGTC	1 cut(s)	1363
BmgT120I	GGNCC	1 cut(s)	1481
BmiI	GGNNCC	2 cut(s)	436, 1483
BmrFI	CCNGG	7 cut(s)	297, 308, 545, 692, 986, 1023, 1623
BmsI	GCATC	1 cut(s)	562
BpuEI	CTTGAG	1 cut(s)	425
BpuMI	CCSGG	1 cut(s)	297
Bsa29I	ATCGAT	2 cut(s)	253, 612
BsaBI	GATNNNNATC	2 cut(s)	956, 1265
BsaJI	CCNNGG	5 cut(s)	691, 984, 1021, 1032, 1485
BsaWI	WCCGGW	1 cut(s)	212
Bsc4I	CCNNNNNNNGG	3 cut(s)	91, 1421, 1592
Bse1I	ACTGG	1 cut(s)	1559
Bse3DI	GCAATG	2 cut(s)	411, 1432
Bse8I	GATNNNNATC	2 cut(s)	956, 1265
BseBI	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
BseCI	ATCGAT	2 cut(s)	253, 612
BseDI	CCNNGG	5 cut(s)	691, 984, 1021, 1032, 1485
BseGI	GGATG	2 cut(s)	153, 526
BseJI	GATNNNNATC	2 cut(s)	956, 1265
BseLI	CCNNNNNNNGG	3 cut(s)	91, 1421, 1592
BseMI	GCAATG	2 cut(s)	411, 1432
BseNI	ACTGG	1 cut(s)	1559
BseSI	GKGCMC	1 cut(s)	188
BseXI	GCAGC	2 cut(s)	1091, 1165
Bsh1236I	CGCG	2 cut(s)	470, 765
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	4 cut(s)	53, 1236, 1431, 1585
BshVI	ATCGAT	2 cut(s)	253, 612
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	2 cut(s)	20, 188
BsiHKCI	CYCGRG	1 cut(s)	1366
BsiSI	CCGG	2 cut(s)	213, 296
BslI	CCNNNNNNNGG	3 cut(s)	91, 1421, 1592
BsmAI	GTCTC	3 cut(s)	873, 1357, 1369
BsmBI	CGTCTC	1 cut(s)	1369
BsmI	GAATGC	2 cut(s)	1261, 1521
BsnI	GGCC	4 cut(s)	53, 1236, 1431, 1585
BsoBI	CYCGRG	1 cut(s)	1366
Bsp1286I	GDGCHC	2 cut(s)	20, 188
Bsp1407I	TGTACA	1 cut(s)	537
Bsp143I	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
Bsp19I	CCATGG	1 cut(s)	1032
Bsp68I	TCGCGA	1 cut(s)	765
BspANI	GGCC	4 cut(s)	53, 1236, 1431, 1585
BspDI	ATCGAT	2 cut(s)	253, 612
BspFNI	CGCG	2 cut(s)	470, 765
BspHI	TCATGA	2 cut(s)	348, 1263
BspLI	GGNNCC	2 cut(s)	436, 1483
BspPI	GGATC	1 cut(s)	617
BspQI	GCTCTTC	1 cut(s)	1069
BspTI	CTTAAG	1 cut(s)	1522
BsrDI	GCAATG	2 cut(s)	411, 1432
BsrGI	TGTACA	1 cut(s)	537
BsrI	ACTGG	1 cut(s)	1559
BssECI	CCNNGG	5 cut(s)	691, 984, 1021, 1032, 1485
BssMI	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
BssSI	CACGAG	1 cut(s)	903
BssT1I	CCWWGG	1 cut(s)	1032
Bst2BI	CACGAG	1 cut(s)	903
Bst2UI	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
Bst4CI	ACNGT	9 cut(s)	183, 844, 1053, 1165, 1285, 1303, 1389, 1451, 1543
Bst6I	CTCTTC	1 cut(s)	1069
BstAFI	CTTAAG	1 cut(s)	1522
BstAUI	TGTACA	1 cut(s)	537
BstC8I	GCNNGC	4 cut(s)	16, 749, 1251, 1598
BstDEI	CTNAG	4 cut(s)	713, 915, 1119, 1142
BstDSI	CCRYGG	2 cut(s)	1032, 1485
BstF5I	GGATG	2 cut(s)	153, 526
BstFNI	CGCG	2 cut(s)	470, 765
BstH2I	RGCGCY	1 cut(s)	98
BstHHI	GCGC	3 cut(s)	97, 107, 470
BstKTI	GATC	9 cut(s)	253, 257, 284, 612, 616, 763, 954, 1263, 1269
BstMAI	GTCTC	3 cut(s)	873, 1357, 1369
BstMBI	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 467
BstNI	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
BstNSI	RCATGY	1 cut(s)	808
BstSCI	CCNGG	7 cut(s)	295, 306, 543, 690, 984, 1021, 1621
BstSLI	GKGCMC	1 cut(s)	188
BstUI	CGCG	2 cut(s)	470, 765
BstV1I	GCAGC	2 cut(s)	1091, 1165
BstX2I	RGATCY	1 cut(s)	951
BstYI	RGATCY	1 cut(s)	951
Bsu15I	ATCGAT	2 cut(s)	253, 612
BsuI	GTATCC	1 cut(s)	973
BsuRI	GGCC	4 cut(s)	53, 1236, 1431, 1585
BsuTUI	ATCGAT	2 cut(s)	253, 612
BtgI	CCRYGG	2 cut(s)	1032, 1485
BtrI	CACGTC	1 cut(s)	1363
BtsCI	GGATG	2 cut(s)	153, 526
BtsI	GCAGTG	1 cut(s)	636
BtsIMutI	CAGTG	5 cut(s)	75, 433, 636, 840, 1308
BtuMI	TCGCGA	1 cut(s)	765
Cac8I	GCNNGC	4 cut(s)	16, 749, 1251, 1598
CaiI	CAGNNNCTG	1 cut(s)	511
CciI	TCATGA	2 cut(s)	348, 1263
CfoI	GCGC	3 cut(s)	97, 107, 470
Cfr13I	GGNCC	1 cut(s)	1481
ClaI	ATCGAT	2 cut(s)	253, 612
Csp6I	GTAC	3 cut(s)	538, 684, 1058
CviAII	CATG	8 cut(s)	349, 787, 805, 879, 976, 1033, 1264, 1579
CviQI	GTAC	3 cut(s)	538, 684, 1058
DdeI	CTNAG	4 cut(s)	713, 915, 1119, 1142
DpnI	GATC	9 cut(s)	252, 256, 283, 611, 615, 762, 953, 1262, 1268
DpnII	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
DraI	TTTAAA	1 cut(s)	1149
EaeI	YGGCCR	2 cut(s)	1234, 1429
Eam1104I	CTCTTC	1 cut(s)	1069
EarI	CTCTTC	1 cut(s)	1069
EciI	GGCGGA	2 cut(s)	266, 962
Ecl136II	GAGCTC	1 cut(s)	18
Eco130I	CCWWGG	1 cut(s)	1032
Eco24I	GRGCYC	1 cut(s)	20
Eco32I	GATATC	1 cut(s)	1377
Eco47I	GGWCC	1 cut(s)	1481
Eco53kI	GAGCTC	1 cut(s)	18
Eco88I	CYCGRG	1 cut(s)	1366
EcoICRI	GAGCTC	1 cut(s)	18
EcoO109I	RGGNCCY	1 cut(s)	1481
EcoRI	GAATTC	1 cut(s)	42
EcoRII	CCWGG	6 cut(s)	306, 543, 690, 984, 1021, 1621
EcoRV	GATATC	1 cut(s)	1377
EcoT14I	CCWWGG	1 cut(s)	1032
EcoT38I	GRGCYC	1 cut(s)	20
ErhI	CCWWGG	1 cut(s)	1032
Esp3I	CGTCTC	1 cut(s)	1369
FaeI	CATG	8 cut(s)	352, 790, 808, 882, 979, 1036, 1267, 1582
FatI	CATG	8 cut(s)	348, 786, 804, 878, 975, 1032, 1263, 1578
FauI	CCCGC	3 cut(s)	1168, 1589, 1593
FbaI	TGATCA	1 cut(s)	1266
Fnu4HI	GCNGC	3 cut(s)	1080, 1154, 1583
FokI	GGATG	2 cut(s)	160, 533
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	3 cut(s)	1080, 1154, 1583
FspBI	CTAG	2 cut(s)	1392, 1506
GlaI	GCGC	3 cut(s)	96, 106, 469
GluI	GCNGC	3 cut(s)	1080, 1154, 1583
HaeII	RGCGCY	1 cut(s)	98
HaeIII	GGCC	4 cut(s)	53, 1236, 1431, 1585
HapII	CCGG	2 cut(s)	213, 296
HhaI	GCGC	3 cut(s)	97, 107, 470
Hin1II	CATG	8 cut(s)	352, 790, 808, 882, 979, 1036, 1267, 1582
Hin6I	GCGC	3 cut(s)	95, 105, 468
HinP1I	GCGC	3 cut(s)	95, 105, 468
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	8 cut(s)	32, 155, 488, 514, 696, 1338, 1436, 1463
HpaII	CCGG	2 cut(s)	213, 296
HphI	GGTGA	3 cut(s)	1051, 1261, 1620
Hpy166II	GTNNAC	4 cut(s)	186, 902, 1511, 1546
Hpy188I	TCNGA	7 cut(s)	48, 58, 814, 1068, 1384, 1441, 1468
Hpy188III	TCNNGA	9 cut(s)	349, 442, 518, 604, 730, 764, 903, 1264, 1366
Hpy8I	GTNNAC	4 cut(s)	186, 902, 1511, 1546
HpyAV	CCTTC	2 cut(s)	551, 1542
HpyCH4III	ACNGT	9 cut(s)	183, 844, 1053, 1165, 1285, 1303, 1389, 1451, 1543
HpyCH4IV	ACGT	4 cut(s)	229, 353, 888, 1362
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 467
HpyF3I	CTNAG	4 cut(s)	713, 915, 1119, 1142
HpySE526I	ACGT	4 cut(s)	229, 353, 888, 1362
Hsp92II	CATG	8 cut(s)	352, 790, 808, 882, 979, 1036, 1267, 1582
HspAI	GCGC	3 cut(s)	95, 105, 468
Ksp22I	TGATCA	1 cut(s)	1266
Kzo9I	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
LguI	GCTCTTC	1 cut(s)	1069
Lsp1109I	GCAGC	2 cut(s)	1091, 1165
LweI	GCATC	1 cut(s)	562
MaeI	CTAG	2 cut(s)	1392, 1506
MaeII	ACGT	4 cut(s)	229, 353, 888, 1362
MaeIII	GTNAC	4 cut(s)	676, 889, 907, 1159
MalI	GATC	9 cut(s)	252, 256, 283, 611, 615, 762, 953, 1262, 1268
MboI	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
MboII	GAAGA	9 cut(s)	146, 249, 260, 328, 1086, 1371, 1472, 1572, 1649
MfeI	CAATTG	1 cut(s)	21
MflI	RGATCY	1 cut(s)	951
MhlI	GDGCHC	2 cut(s)	20, 188
MlsI	TGGCCA	2 cut(s)	1236, 1431
MluCI	AATT	9 cut(s)	21, 42, 174, 198, 323, 334, 647, 858, 1641
MluNI	TGGCCA	2 cut(s)	1236, 1431
MlyI	GAGTC	1 cut(s)	164
MmeI	TCCRAC	4 cut(s)	81, 346, 1134, 1526
MnlI	CCTC	5 cut(s)	64, 209, 449, 600, 1462
Mox20I	TGGCCA	2 cut(s)	1236, 1431
MroXI	GAANNNNTTC	1 cut(s)	86
MscI	TGGCCA	2 cut(s)	1236, 1431
MseI	TTAA	5 cut(s)	290, 567, 1148, 1224, 1523
MslI	CAYNNNNRTG	2 cut(s)	68, 1037
Msp20I	TGGCCA	2 cut(s)	1236, 1431
MspCI	CTTAAG	1 cut(s)	1522
MspI	CCGG	2 cut(s)	213, 296
MspR9I	CCNGG	7 cut(s)	297, 308, 545, 692, 986, 1023, 1623
MunI	CAATTG	1 cut(s)	21
Mva1269I	GAATGC	2 cut(s)	1261, 1521
MvaI	CCWGG	6 cut(s)	308, 545, 692, 986, 1023, 1623
MvnI	CGCG	2 cut(s)	470, 765
MwoI	GCNNNNNNNGC	2 cut(s)	11, 467
NciI	CCSGG	1 cut(s)	297
NcoI	CCATGG	1 cut(s)	1032
NdeII	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
NlaIII	CATG	8 cut(s)	352, 790, 808, 882, 979, 1036, 1267, 1582
NlaIV	GGNNCC	2 cut(s)	436, 1483
NmeAIII	GCCGAG	1 cut(s)	1401
NmuCI	GTSAC	2 cut(s)	889, 907
NruI	TCGCGA	1 cut(s)	765
NspI	RCATGY	1 cut(s)	808
OliI	CACNNNNGTG	1 cut(s)	68
PaeR7I	CTCGAG	1 cut(s)	1366
PagI	TCATGA	2 cut(s)	348, 1263
PciSI	GCTCTTC	1 cut(s)	1069
PctI	GAATGC	2 cut(s)	1261, 1521
PdmI	GAANNNNTTC	1 cut(s)	86
PfeI	GAWTC	7 cut(s)	32, 488, 514, 696, 1338, 1436, 1463
PkrI	GCNGC	3 cut(s)	1081, 1155, 1584
PleI	GAGTC	1 cut(s)	163
PpsI	GAGTC	1 cut(s)	163
PpuMI	RGGWCCY	1 cut(s)	1481
PsiI	TTATAA	1 cut(s)	1215
Psp124BI	GAGCTC	1 cut(s)	20
Psp5II	RGGWCCY	1 cut(s)	1481
Psp6I	CCWGG	6 cut(s)	306, 543, 690, 984, 1021, 1621
PspGI	CCWGG	6 cut(s)	306, 543, 690, 984, 1021, 1621
PspN4I	GGNNCC	2 cut(s)	436, 1483
PspPI	GGNCC	1 cut(s)	1481
PspPPI	RGGWCCY	1 cut(s)	1481
PstNI	CAGNNNCTG	1 cut(s)	511
PsuI	RGATCY	1 cut(s)	951
RruI	TCGCGA	1 cut(s)	765
RsaI	GTAC	3 cut(s)	539, 685, 1059
RsaNI	GTAC	3 cut(s)	538, 684, 1058
RseI	CAYNNNNRTG	2 cut(s)	68, 1037
SacI	GAGCTC	1 cut(s)	20
SapI	GCTCTTC	1 cut(s)	1069
SaqAI	TTAA	5 cut(s)	290, 567, 1148, 1224, 1523
SatI	GCNGC	3 cut(s)	1080, 1154, 1583
Sau3AI	GATC	9 cut(s)	250, 254, 281, 609, 613, 760, 951, 1260, 1266
Sau96I	GGNCC	1 cut(s)	1481
SchI	GAGTC	1 cut(s)	164
ScrFI	CCNGG	7 cut(s)	297, 308, 545, 692, 986, 1023, 1623
SduI	GDGCHC	2 cut(s)	20, 188
SfaNI	GCATC	1 cut(s)	562
Sfr274I	CTCGAG	1 cut(s)	1366
SinI	GGWCC	1 cut(s)	1481
SlaI	CTCGAG	1 cut(s)	1366
SmiMI	CAYNNNNRTG	2 cut(s)	68, 1037
SmlI	CTYRAG	3 cut(s)	440, 1366, 1522
SmoI	CTYRAG	3 cut(s)	440, 1366, 1522
SpeI	ACTAGT	1 cut(s)	1505
Sse9I	AATT	9 cut(s)	21, 42, 174, 198, 323, 334, 647, 858, 1641
SspMI	CTAG	2 cut(s)	1392, 1506
SstI	GAGCTC	1 cut(s)	20
StyD4I	CCNGG	7 cut(s)	295, 306, 543, 690, 984, 1021, 1621
StyI	CCWWGG	1 cut(s)	1032
TaaI	ACNGT	9 cut(s)	183, 844, 1053, 1165, 1285, 1303, 1389, 1451, 1543
TaiI	ACGT	4 cut(s)	232, 356, 891, 1365
TaqI	TCGA	7 cut(s)	9, 77, 142, 253, 612, 1046, 1367
TaqII	GACCGA	1 cut(s)	110
TasI	AATT	9 cut(s)	21, 42, 174, 198, 323, 334, 647, 858, 1641
TatI	WGTACW	2 cut(s)	537, 683
TauI	GCSGC	1 cut(s)	1585
TfiI	GAWTC	7 cut(s)	32, 488, 514, 696, 1338, 1436, 1463
Tru1I	TTAA	5 cut(s)	290, 567, 1148, 1224, 1523
Tru9I	TTAA	5 cut(s)	290, 567, 1148, 1224, 1523
TscAI	CASTG	5 cut(s)	75, 433, 643, 847, 1308
TseFI	GTSAC	2 cut(s)	889, 907
TseI	GCWGC	2 cut(s)	1079, 1153
Tsp45I	GTSAC	2 cut(s)	889, 907
TspDTI	ATGAA	5 cut(s)	95, 164, 328, 537, 1567
TspGWI	ACGGA	3 cut(s)	44, 1256, 1502
TspRI	CASTG	5 cut(s)	75, 433, 643, 847, 1308
Vha464I	CTTAAG	1 cut(s)	1522
VneI	GTGCAC	1 cut(s)	184
VpaK11BI	GGWCC	1 cut(s)	1481
XapI	RAATTY	1 cut(s)	42
XceI	RCATGY	1 cut(s)	808
XhoI	CTCGAG	1 cut(s)	1366
XmnI	GAANNNNTTC	1 cut(s)	86
XspI	CTAG	2 cut(s)	1392, 1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.