Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0001413

Physical Location & Seq

Genomic Coordinates Reverse (-)

43288753 .. 43294720

Gene Structure 5968 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G019760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGCGTTGGATTTGAGCTCAATGGCATCGGAATCGGTGGGAATGTTGAACACTTCCGATCATACTTCGGTTGTGTCCATGAACCTCTTTGTGGCGCTGCTTTGCGCTTGTATATTGCTTGGACATTTGCTGGAGGAGAGTAGATGGATGAATGAGTCCATTACGGCCCTTGCGATTGGATTGTGCACTGGGATTGTTATATTGCTGACCACAAAAGGGAAAAGCTCTCATTTGTTAGTGTTTAGTGAAGATCTTTTCTTCATCTATCTCCTTCCTCCTATCATTTTCAATGCCGGGTTCCAAGTGAAGAAGAAGCAATTTTTTCGTAACTTCATGACAATCATGATGTTTGGGGCTATCGGCACTCTCATATCCTTTGCCACCATATCCTTAGGTGCTATGCACTTTTTCCGCAAGTTCAGCATTGGTGACCTCAACATCGGAGATTATCTCGCACTTGGAGCAATATTTTCTGCAACCGATTCTGTTTGCACCTTGCAGGTGCTTAATCAAGATGAGACACCTTTGTTATACAGTCTGGTTTTTGGGGAAGGTGTGGTCAATGATGCTACATCAGTCGTGCTTTTCAATGCAATCCAGAGCTTTGACCTCTCCCACATCAATACAAGCACTGTTATGCAGTTTATTGGAAACTTTTTATATCTATTTGCTACAAGTACAATGCTGGGAGTTGTAGCTGGACTACTTAGTGCATATGTAATTAGAAAGCTCTATTTTGGCAGACACTCAACCGATCGTGAAGTTGCTCTTATGATCCTCATGGCTTACCTTTCGTACATGCTAGCTGAACTGTTTTATTTAAGTGCCATTCTCACTGTGTTCTTTTGTGGAATTGTTATGTCTCACTACACATGGCATAATGTGACTGAAAGTTCAAGAGTGACAACTAAGCATGCTTTTGCCACTCTATCATTTGTTGCTGAGATTTTTATCTTTCTTTACGTTGGTATGGACGCCTTAGACATTGACAAGTGGAGATTTGTGAGCGATAGTCCGGGAAAATCCTTAGCGGTGAGTTCAATACTCTTGGCACTGGTTATGGTTGGAAGAGCAGCCTTCGTTTTCCCCTTATCTTTCTTATCCAACTTGACCAAGAAATCTCCACAAGACAAGATCCATTTGAAGCAACAAGTTACAATTTGGTGGGCTGGTCTTATGCGTGGTGCTGTTTCTATGGCACTTGCTTATAATCAGTTTACTAGGTCTGGCCATACTGACCTGCGCGCAAATGCATACATGATCACCAGCACTATCACAGTTGTTCTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAACCCCTAGTGAGGATCTTGCTTCCTACATCAAAACACTTCACTAGTATGACATCTTCTGAACCTTCTAGTCCTAAATCCTTCATTGTGCCACTGCTCACCAACGGGCAAGATTCAGAGGCCAACATCAGGTCCGCGGACATACCCCGCCCTACTAGTTTAAGAATGCTTCTAAGCACTCCTAATTTTCTCCACATTATGTGGAATAACTTCTCGAGTAATTATCCACACCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0006950 GO:0006970 GO:0008150 GO:0008324 GO:0009628 GO:0009651 GO:0009987 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0090333 GO:0098588 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0098805 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

517

Amino Acids

57.27

Weight (kDa)

8.19

Isoelectric Point (pI)

38.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	32 - 444	7.6e-59	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05030 AT3G05030 AT3G05030 AT3G05030 AT5G27150
fragaria_vesca	FvH4_4g17120 FvH4_4g17120 FvH4_6g04140
malus_domestica	MD00G1051300.v1.1 MD12G1232400.v1.1 MD13G1174300.v1.1 MD16G1175800.v1.1
prunus_persica	Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.6G335800_v2.0.a1
pyrus_communis	pycom12g21480 pycom13g14990 pycom16g14730
rosa_chinensis	RchiOBHm_Chr3g0452721 RchiOBHm_Chr4g0420901 RchiOBHm_Chr5g0080441
rosa_laevigata	RLG00000007726 RLG00000025572
rosa_multiflora	Rmu_sc0002006.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363300 Rroxscaffold_6G00429730
rosa_rugosa	Rorug02G0642900 Rorug02G0642900 Rorug04G0166900 Rorug04G0167000 Rorug04G0167100
rosa_samantha	Rh3AG045100 Rh3BG047600 Rh3CG046100 Rh3DG046400 Rh4BG231400 Rh4DG226500
rosa_wichuraiana	Rw3G003530 Rw4G019760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1209
AarI	CACCTGC	1 cut(s)	490
Acc36I	ACCTGC	2 cut(s)	490, 1248
AccII	CGCG	2 cut(s)	1245, 1454
AciI	CCGC	5 cut(s)	412, 1031, 1452, 1454, 1465
AclWI	GGATC	3 cut(s)	769, 1129, 1340
AcoI	YGGCCR	1 cut(s)	1228
AcyI	GRCGYC	1 cut(s)	975
AfaI	GTAC	2 cut(s)	679, 797
AfiI	CCNNNNNNNGG	4 cut(s)	91, 216, 1329, 1446
AgsI	TTSAA	6 cut(s)	49, 289, 589, 897, 1041, 1144
AhlI	ACTAGT	2 cut(s)	1361, 1472
AleI	CACNNNNGTG	1 cut(s)	1298
AluBI	AGCT	6 cut(s)	18, 225, 603, 698, 730, 806
AluI	AGCT	6 cut(s)	18, 225, 603, 698, 730, 806
Alw21I	GWGCWC	2 cut(s)	20, 188
Alw26I	GTCTC	2 cut(s)	512, 867
Alw44I	GTGCAC	1 cut(s)	184
AlwI	GGATC	3 cut(s)	769, 1129, 1340
Ama87I	CYCGRG	1 cut(s)	1531
AoxI	GGCC	3 cut(s)	165, 1228, 1437
ApaLI	GTGCAC	1 cut(s)	184
ApeKI	GCWGC	2 cut(s)	97, 1073
Asp700I	GAANNNNTTC	1 cut(s)	1526
AspLEI	GCGC	4 cut(s)	97, 107, 1245, 1247
AspS9I	GGNCC	2 cut(s)	166, 1449
AsuC2I	CCSGG	2 cut(s)	295, 1017
AsuHPI	GGTGA	4 cut(s)	440, 1045, 1255, 1408
AsuNHI	GCTAGC	1 cut(s)	802
AvaI	CYCGRG	1 cut(s)	1531
AvaII	GGWCC	1 cut(s)	1449
AxyI	CCTNAGG	1 cut(s)	391
BaeGI	GKGCMC	1 cut(s)	188
BalI	TGGCCA	1 cut(s)	1230
BanII	GRGCYC	1 cut(s)	20
BarI	GAAGNNNNNNTAC	2 cut(s)	1357, 1389
Bbv12I	GWGCWC	2 cut(s)	20, 188
BbvI	GCAGC	2 cut(s)	84, 1085
BccI	CCATC	1 cut(s)	138
BceAI	ACGGC	1 cut(s)	180
BcgI	CGANNNNNNTGC	4 cut(s)	15, 49, 305, 339
BclI	TGATCA	1 cut(s)	1260
BcnI	CCSGG	2 cut(s)	295, 1017
BcoDI	GTCTC	2 cut(s)	512, 867
BcuI	ACTAGT	2 cut(s)	1361, 1472
BfaI	CTAG	6 cut(s)	803, 1221, 1325, 1362, 1386, 1473
BfoI	RGCGCY	1 cut(s)	98
BfuAI	ACCTGC	2 cut(s)	490, 1248
BglII	AGATCT	1 cut(s)	250
BisI	GCNGC	2 cut(s)	98, 1074
BlsI	GCNGC	2 cut(s)	99, 1075
Bme1390I	CCNGG	2 cut(s)	295, 1017
Bme18I	GGWCC	1 cut(s)	1449
BmeT110I	CYCGRG	1 cut(s)	1531
BmgT120I	GGNCC	2 cut(s)	166, 1449
BmiI	GGNNCC	1 cut(s)	299
BmrFI	CCNGG	2 cut(s)	295, 1017
BmrI	ACTGGG	1 cut(s)	198
BmsI	GCATC	2 cut(s)	35, 556
BmtI	GCTAGC	1 cut(s)	806
BmuI	ACTGGG	1 cut(s)	198
BplI	GAGNNNNNCTC	2 cut(s)	435, 467
BpmI	CTGGAG	1 cut(s)	152
Bpu10I	CCTNAGC	1 cut(s)	1027
BpuMI	CCSGG	2 cut(s)	295, 1017
BsaBI	GATNNNNATC	1 cut(s)	950
BsaHI	GRCGYC	1 cut(s)	975
BsaJI	CCNNGG	1 cut(s)	1452
Bsc4I	CCNNNNNNNGG	4 cut(s)	91, 216, 1329, 1446
Bse1I	ACTGG	2 cut(s)	193, 1059
Bse21I	CCTNAGG	1 cut(s)	391
Bse8I	GATNNNNATC	1 cut(s)	950
BseDI	CCNNGG	1 cut(s)	1452
BseGI	GGATG	1 cut(s)	153
BseJI	GATNNNNATC	1 cut(s)	950
BseLI	CCNNNNNNNGG	4 cut(s)	91, 216, 1329, 1446
BseMII	CTCAG	1 cut(s)	933
BseNI	ACTGG	2 cut(s)	193, 1059
BsePI	GCGCGC	1 cut(s)	1243
BseRI	GAGGAG	1 cut(s)	149
BseSI	GKGCMC	1 cut(s)	188
BseXI	GCAGC	2 cut(s)	84, 1085
BseYI	CCCAGC	1 cut(s)	685
Bsh1236I	CGCG	2 cut(s)	1245, 1454
Bsh1285I	CGRYCG	1 cut(s)	757
BshFI	GGCC	3 cut(s)	167, 1230, 1439
BsiEI	CGRYCG	1 cut(s)	757
BsiHKAI	GWGCWC	2 cut(s)	20, 188
BsiHKCI	CYCGRG	1 cut(s)	1531
BsiSI	CCGG	2 cut(s)	294, 1016
BslI	CCNNNNNNNGG	4 cut(s)	91, 216, 1329, 1446
BsmAI	GTCTC	2 cut(s)	512, 867
BsmI	GAATGC	1 cut(s)	1488
BsnI	GGCC	3 cut(s)	167, 1230, 1439
BsoBI	CYCGRG	1 cut(s)	1531
Bsp1286I	GDGCHC	2 cut(s)	20, 188
Bsp143I	GATC	7 cut(s)	58, 250, 754, 774, 1134, 1260, 1332
BspACI	CCGC	5 cut(s)	412, 1031, 1452, 1454, 1465
BspANI	GGCC	3 cut(s)	167, 1230, 1439
BspCNI	CTCAG	1 cut(s)	934
BspFNI	CGCG	2 cut(s)	1245, 1454
BspHI	TCATGA	2 cut(s)	333, 342
BspLI	GGNNCC	1 cut(s)	299
BspMI	ACCTGC	2 cut(s)	490, 1248
BspOI	GCTAGC	1 cut(s)	806
BspPI	GGATC	3 cut(s)	769, 1129, 1340
BspQI	GCTCTTC	1 cut(s)	1063
BsrI	ACTGG	2 cut(s)	193, 1059
BssECI	CCNNGG	1 cut(s)	1452
BssHII	GCGCGC	1 cut(s)	1243
BssMI	GATC	7 cut(s)	58, 250, 754, 774, 1134, 1260, 1332
BssNI	GRCGYC	1 cut(s)	975
Bst4CI	ACNGT	6 cut(s)	536, 634, 813, 838, 1279, 1297
Bst6I	CTCTTC	1 cut(s)	1063
BstACI	GRCGYC	1 cut(s)	975
BstC8I	GCNNGC	3 cut(s)	804, 915, 1245
BstDEI	CTNAG	7 cut(s)	391, 707, 909, 942, 979, 1027, 1490
BstDSI	CCRYGG	1 cut(s)	1452
BstEII	GGTNACC	1 cut(s)	428
BstF5I	GGATG	1 cut(s)	153
BstFNI	CGCG	2 cut(s)	1245, 1454
BstH2I	RGCGCY	1 cut(s)	98
BstHHI	GCGC	4 cut(s)	97, 107, 1245, 1247
BstKTI	GATC	7 cut(s)	61, 253, 757, 777, 1137, 1263, 1335
BstMAI	GTCTC	2 cut(s)	512, 867
BstMBI	GATC	7 cut(s)	58, 250, 754, 774, 1134, 1260, 1332
BstMCI	CGRYCG	1 cut(s)	757
BstMWI	GCNNNNNNNGC	2 cut(s)	420, 461
BstNSI	RCATGY	2 cut(s)	802, 917
BstPI	GGTNACC	1 cut(s)	428
BstSCI	CCNGG	2 cut(s)	293, 1015
BstSLI	GKGCMC	1 cut(s)	188
BstUI	CGCG	2 cut(s)	1245, 1454
BstV1I	GCAGC	2 cut(s)	84, 1085
BstX2I	RGATCY	3 cut(s)	250, 1134, 1332
BstYI	RGATCY	3 cut(s)	250, 1134, 1332
Bsu36I	CCTNAGG	1 cut(s)	391
BsuRI	GGCC	3 cut(s)	167, 1230, 1439
BtgI	CCRYGG	1 cut(s)	1452
BtsCI	GGATG	1 cut(s)	153
BtsI	GCAGTG	1 cut(s)	1409
BtsIMutI	CAGTG	6 cut(s)	186, 630, 834, 1052, 1302, 1409
BveI	ACCTGC	2 cut(s)	490, 1248
Cac8I	GCNNGC	3 cut(s)	804, 915, 1245
CciI	TCATGA	2 cut(s)	333, 342
CfoI	GCGC	4 cut(s)	97, 107, 1245, 1247
Cfr13I	GGNCC	2 cut(s)	166, 1449
Cfr42I	CCGCGG	1 cut(s)	1455
CseI	GACGC	1 cut(s)	983
Csp6I	GTAC	2 cut(s)	678, 796
CviAII	CATG	8 cut(s)	79, 334, 343, 781, 799, 873, 914, 1258
CviQI	GTAC	2 cut(s)	678, 796
DdeI	CTNAG	7 cut(s)	391, 707, 909, 942, 979, 1027, 1490
DpnI	GATC	7 cut(s)	60, 252, 756, 776, 1136, 1262, 1334
DpnII	GATC	7 cut(s)	58, 250, 754, 774, 1134, 1260, 1332
EaeI	YGGCCR	1 cut(s)	1228
Eam1104I	CTCTTC	1 cut(s)	1063
EarI	CTCTTC	1 cut(s)	1063
Ecl136II	GAGCTC	1 cut(s)	18
Eco24I	GRGCYC	1 cut(s)	20
Eco47I	GGWCC	1 cut(s)	1449
Eco53kI	GAGCTC	1 cut(s)	18
Eco81I	CCTNAGG	1 cut(s)	391
Eco88I	CYCGRG	1 cut(s)	1531
Eco91I	GGTNACC	1 cut(s)	428
EcoICRI	GAGCTC	1 cut(s)	18
EcoO65I	GGTNACC	1 cut(s)	428
EcoT22I	ATGCAT	1 cut(s)	1255
EcoT38I	GRGCYC	1 cut(s)	20
FaeI	CATG	8 cut(s)	82, 337, 346, 784, 802, 876, 917, 1261
FalI	AAGNNNNNCTT	2 cut(s)	753, 785
FatI	CATG	8 cut(s)	78, 333, 342, 780, 798, 872, 913, 1257
FauI	CCCGC	1 cut(s)	1472
FauNDI	CATATG	1 cut(s)	715
FbaI	TGATCA	1 cut(s)	1260
Fnu4HI	GCNGC	2 cut(s)	98, 1074
FokI	GGATG	1 cut(s)	160
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	2 cut(s)	98, 1074
FspBI	CTAG	6 cut(s)	803, 1221, 1325, 1362, 1386, 1473
GlaI	GCGC	4 cut(s)	96, 106, 1244, 1246
GluI	GCNGC	2 cut(s)	98, 1074
GsaI	CCCAGC	1 cut(s)	689
GsuI	CTGGAG	1 cut(s)	152
HaeII	RGCGCY	1 cut(s)	98
HaeIII	GGCC	3 cut(s)	167, 1230, 1439
HapII	CCGG	2 cut(s)	294, 1016
HgaI	GACGC	1 cut(s)	983
HhaI	GCGC	4 cut(s)	97, 107, 1245, 1247
Hin1I	GRCGYC	1 cut(s)	975
Hin1II	CATG	8 cut(s)	82, 337, 346, 784, 802, 876, 917, 1261
Hin6I	GCGC	4 cut(s)	95, 105, 1243, 1245
HinP1I	GCGC	4 cut(s)	95, 105, 1243, 1245
HinfI	GANTC	4 cut(s)	32, 155, 482, 1430
HpaII	CCGG	2 cut(s)	294, 1016
HphI	GGTGA	4 cut(s)	440, 1045, 1255, 1408
Hpy166II	GTNNAC	2 cut(s)	186, 1218
Hpy188I	TCNGA	5 cut(s)	31, 58, 443, 1378, 1435
Hpy188III	TCNNGA	7 cut(s)	334, 343, 512, 598, 758, 897, 1531
Hpy8I	GTNNAC	2 cut(s)	186, 1218
HpyAV	CCTTC	5 cut(s)	281, 545, 1087, 1392, 1408
HpyCH4III	ACNGT	6 cut(s)	536, 634, 813, 838, 1279, 1297
HpyCH4IV	ACGT	1 cut(s)	963
HpyCH4V	TGCA	9 cut(s)	186, 403, 476, 492, 499, 593, 640, 713, 1253
HpyF10VI	GCNNNNNNNGC	2 cut(s)	420, 461
HpyF3I	CTNAG	7 cut(s)	391, 707, 909, 942, 979, 1027, 1490
HpySE526I	ACGT	1 cut(s)	963
Hsp92I	GRCGYC	1 cut(s)	975
Hsp92II	CATG	8 cut(s)	82, 337, 346, 784, 802, 876, 917, 1261
HspAI	GCGC	4 cut(s)	95, 105, 1243, 1245
Ksp22I	TGATCA	1 cut(s)	1260
KspI	CCGCGG	1 cut(s)	1455
Kzo9I	GATC	7 cut(s)	58, 250, 754, 774, 1134, 1260, 1332
LguI	GCTCTTC	1 cut(s)	1063
LmnI	GCTCC	1 cut(s)	461
Lsp1109I	GCAGC	2 cut(s)	84, 1085
LweI	GCATC	2 cut(s)	35, 556
MaeI	CTAG	6 cut(s)	803, 1221, 1325, 1362, 1386, 1473
MaeII	ACGT	1 cut(s)	963
MaeIII	GTNAC	5 cut(s)	326, 428, 883, 901, 1153
MalI	GATC	7 cut(s)	60, 252, 756, 776, 1136, 1262, 1334
MboI	GATC	7 cut(s)	58, 250, 754, 774, 1134, 1260, 1332
MboII	GAAGA	6 cut(s)	250, 260, 319, 322, 1080, 1365
MflI	RGATCY	3 cut(s)	250, 1134, 1332
MhlI	GDGCHC	2 cut(s)	20, 188
MlsI	TGGCCA	1 cut(s)	1230
MluCI	AATT	6 cut(s)	317, 720, 852, 1158, 1501, 1537
MluNI	TGGCCA	1 cut(s)	1230
MlyI	GAGTC	1 cut(s)	164
MmeI	TCCRAC	2 cut(s)	1045, 1128
MnlI	CCTC	8 cut(s)	95, 127, 285, 443, 620, 788, 1323, 1429
Mox20I	TGGCCA	1 cut(s)	1230
Mph1103I	ATGCAT	1 cut(s)	1255
MroXI	GAANNNNTTC	1 cut(s)	1526
MscI	TGGCCA	1 cut(s)	1230
MseI	TTAA	3 cut(s)	507, 821, 1478
MslI	CAYNNNNRTG	3 cut(s)	635, 1298, 1364
Msp20I	TGGCCA	1 cut(s)	1230
MspA1I	CMGCKG	1 cut(s)	1454
MspI	CCGG	2 cut(s)	294, 1016
MspR9I	CCNGG	2 cut(s)	295, 1017
Mva1269I	GAATGC	1 cut(s)	1488
MvnI	CGCG	2 cut(s)	1245, 1454
MwoI	GCNNNNNNNGC	2 cut(s)	420, 461
NciI	CCSGG	2 cut(s)	295, 1017
NdeI	CATATG	1 cut(s)	715
NdeII	GATC	7 cut(s)	58, 250, 754, 774, 1134, 1260, 1332
NheI	GCTAGC	1 cut(s)	802
NlaIII	CATG	8 cut(s)	82, 337, 346, 784, 802, 876, 917, 1261
NlaIV	GGNNCC	1 cut(s)	299
NmuCI	GTSAC	3 cut(s)	428, 883, 901
NsiI	ATGCAT	1 cut(s)	1255
NspI	RCATGY	2 cut(s)	802, 917
OliI	CACNNNNGTG	1 cut(s)	1298
PaeI	GCATGC	1 cut(s)	917
PaeR7I	CTCGAG	1 cut(s)	1531
PagI	TCATGA	2 cut(s)	333, 342
PaqCI	CACCTGC	1 cut(s)	490
PauI	GCGCGC	1 cut(s)	1243
PciSI	GCTCTTC	1 cut(s)	1063
PcsI	WCGNNNNNNNCGW	1 cut(s)	170
PctI	GAATGC	1 cut(s)	1488
PdmI	GAANNNNTTC	1 cut(s)	1526
PfeI	GAWTC	3 cut(s)	32, 482, 1430
PfoI	TCCNGGA	1 cut(s)	1015
PkrI	GCNGC	2 cut(s)	99, 1075
Ple19I	CGATCG	1 cut(s)	757
PleI	GAGTC	1 cut(s)	163
PpsI	GAGTC	1 cut(s)	163
PsiI	TTATAA	1 cut(s)	1209
Psp124BI	GAGCTC	1 cut(s)	20
PspEI	GGTNACC	1 cut(s)	428
PspFI	CCCAGC	1 cut(s)	685
PspN4I	GGNNCC	1 cut(s)	299
PspPI	GGNCC	2 cut(s)	166, 1449
PsuI	RGATCY	3 cut(s)	250, 1134, 1332
PteI	GCGCGC	1 cut(s)	1243
PvuI	CGATCG	1 cut(s)	757
RsaI	GTAC	2 cut(s)	679, 797
RsaNI	GTAC	2 cut(s)	678, 796
RseI	CAYNNNNRTG	3 cut(s)	635, 1298, 1364
SacI	GAGCTC	1 cut(s)	20
SacII	CCGCGG	1 cut(s)	1455
SapI	GCTCTTC	1 cut(s)	1063
SaqAI	TTAA	3 cut(s)	507, 821, 1478
SatI	GCNGC	2 cut(s)	98, 1074
Sau3AI	GATC	7 cut(s)	58, 250, 754, 774, 1134, 1260, 1332
Sau96I	GGNCC	2 cut(s)	166, 1449
SchI	GAGTC	1 cut(s)	164
ScrFI	CCNGG	2 cut(s)	295, 1017
SduI	GDGCHC	2 cut(s)	20, 188
SfaNI	GCATC	2 cut(s)	35, 556
Sfr274I	CTCGAG	1 cut(s)	1531
Sfr303I	CCGCGG	1 cut(s)	1455
SgrBI	CCGCGG	1 cut(s)	1455
SinI	GGWCC	1 cut(s)	1449
SlaI	CTCGAG	1 cut(s)	1531
SmiMI	CAYNNNNRTG	3 cut(s)	635, 1298, 1364
SmlI	CTYRAG	1 cut(s)	1531
SmoI	CTYRAG	1 cut(s)	1531
SpeI	ACTAGT	2 cut(s)	1361, 1472
SphI	GCATGC	1 cut(s)	917
Sse9I	AATT	6 cut(s)	317, 720, 852, 1158, 1501, 1537
SsiI	CCGC	5 cut(s)	412, 1031, 1452, 1454, 1465
SspI	AATATT	1 cut(s)	468
SspMI	CTAG	6 cut(s)	803, 1221, 1325, 1362, 1386, 1473
SstI	GAGCTC	1 cut(s)	20
StyD4I	CCNGG	2 cut(s)	293, 1015
TaaI	ACNGT	6 cut(s)	536, 634, 813, 838, 1279, 1297
TaiI	ACGT	1 cut(s)	966
TaqI	TCGA	1 cut(s)	1532
TasI	AATT	6 cut(s)	317, 720, 852, 1158, 1501, 1537
TatI	WGTACW	1 cut(s)	677
TfiI	GAWTC	3 cut(s)	32, 482, 1430
Tru1I	TTAA	3 cut(s)	507, 821, 1478
Tru9I	TTAA	3 cut(s)	507, 821, 1478
TscAI	CASTG	6 cut(s)	193, 637, 841, 1059, 1302, 1416
TseFI	GTSAC	3 cut(s)	428, 883, 901
TseI	GCWGC	2 cut(s)	97, 1073
Tsp45I	GTSAC	3 cut(s)	428, 883, 901
TspDTI	ATGAA	5 cut(s)	95, 164, 250, 322, 1390
TspRI	CASTG	6 cut(s)	193, 637, 841, 1059, 1302, 1416
VneI	GTGCAC	1 cut(s)	184
VpaK11BI	GGWCC	1 cut(s)	1449
XceI	RCATGY	2 cut(s)	802, 917
XhoI	CTCGAG	1 cut(s)	1531
XmnI	GAANNNNTTC	1 cut(s)	1526
XspI	CTAG	6 cut(s)	803, 1221, 1325, 1362, 1386, 1473
Zsp2I	ATGCAT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.