Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0001413

Physical Location & Seq

Genomic Coordinates Forward (+)

9675774 .. 9680661

Gene Structure 4888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1051300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGCTGTTGCACATTTGAGCATGATGATCTCAAAGTTACAAAATCTATCCACTTCGGACCACTCCTCCGTGGTTTCGATGAACCTATTTGTGGCGCTCCTTTTAGCTTGTATTGTGATCGGTCATCTTCTCGAGGAGAATCGATGGGTGAATGAGTCGATCACCGCCCTTTTGATTGGGGTTTGCACCGGGGTAGTTATTCTTCTGATCAGTAGAGGAAAAAGCTCGCATCTTTTGGTTTTCAGTGAAGATCTTTTCTTTATATACCTCTTGCCGCCTATTATTTTCAATGCTGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTGTTAACTTCATGACCATTGTAATGTTTGGTGCTATTGGTACATTAGTATCCTGCACTATCATATCATTAGGTGCTACACAATTCTTTAAGAAGTTGGACATTGGAACTCTGGAGTTGGGGGACTTCCTTGCAATCGGTGCAATATTTGCTGCAACGGATTCTGTTTGCACGTTGCAGGTGCTCAATCAGGATGAGACACCTTTACTTTACAGTCTTGTATTTGGGGAGGGTGTCGTTAACGATGCGACATCTGTGGTCCTTTTCAATGCTATTCAGAGCTTTGATCTCACCCACATTGATTCCAGTATTGCTTTGCACTTTATGGGCAACTTCTTATATTTGTTTTTCGCAAGCACTATGCTAGGAGTGTTTGCAGGGCTGCTTAGTGCTTACATTATCAAAAAGCTTTATTTTGGAAGGCACTCTACGGATCGTGAGGTTGCTCTTATGATGCTCATGGCATACTTGTCATATATACTGGCTGAATTATTCTATTTGAGTGGCATTCTCACTGTGTTCTTTTGTGGGATTGTGATGTCACATTACACTTGGCACAATGTGACGGAGAGTTCAAGAGTTACGACCAAGCATGCTTTCGCAACCTTGTCATTTCTTGCCGAAACATTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGATTTGTAAGTGACAGTCCTGGAACATCAGTGGCAGTGAGTTCAATACTGCTAGGTCTTATTATGCTTGGAAGAGCAGCTTTCATTTTCCCCCTATCATTCTTGTCGAACTTAACAAAGAAAAACCAACATGATAAAATTAGCCTCCGGCAGCAAGTTATAATATGGTGGGCTGGTCTCATGAGAGGTGCTGTGTCTATGGCACTTGCTTACAATCAGTTTACAAGGTCAGGCCACACGCAGTTGCGAGCAAATGCAATCATGATCACTAGCACGATAACTGTTGTTCTTGTCAGCACAGTGGTTTTCGGATTGATGACGAAACCTCTTATAAGGTTCTTGCTGCCTCATTCACCAAAACAAACAACCAGCATGTTGTCGTCAGAACCAACCTCTCCAAAATCAGTCATTGTTCCACTTCTAGGGCAGGATTCTGTAGATGATCTTGTTGGCCAAGATTTTCGACGGCCGGCCAGCTTACGCGATCTTCTGACAACTCCAACGCACACAGTCCATCGCTATTGGCGTAAGTTTGACAACGCATTCATGCGTCCAGTCTTTGGAGGCCGGGGTTTTGTTCCCTTTGTTCCCGGGTCACCAACTGAACGGGACAACAACGTTCAGTGGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008324 GO:0009628 GO:0009651 GO:0009987 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051453 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0090333 GO:0098588 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0098805 GO:0099402 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

543

Amino Acids

60.19

Weight (kDa)

8.49

Isoelectric Point (pI)

34.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	37 - 443	8.7e-57	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05030 AT3G05030 AT3G05030 AT3G05030 AT5G27150
fragaria_vesca	FvH4_4g17120 FvH4_4g17120 FvH4_6g04140
malus_domestica	MD00G1051300.v1.1 MD12G1232400.v1.1 MD13G1174300.v1.1 MD16G1175800.v1.1
prunus_persica	Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.1G142700_v2.0.a1 Prupe.6G335800_v2.0.a1
pyrus_communis	pycom12g21480 pycom13g14990 pycom16g14730
rosa_chinensis	RchiOBHm_Chr3g0452721 RchiOBHm_Chr4g0420901 RchiOBHm_Chr5g0080441
rosa_laevigata	RLG00000007726 RLG00000025572
rosa_multiflora	Rmu_sc0002006.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363300 Rroxscaffold_6G00429730
rosa_rugosa	Rorug02G0642900 Rorug02G0642900 Rorug04G0166900 Rorug04G0167000 Rorug04G0167100
rosa_samantha	Rh3AG045100 Rh3BG047600 Rh3CG046100 Rh3DG046400 Rh4BG231400 Rh4DG226500
rosa_wichuraiana	Rw3G003530 Rw4G019760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1157, 1328
AarI	CACCTGC	1 cut(s)	490
Acc36I	ACCTGC	1 cut(s)	490
AccB7I	CCANNNNNTGG	1 cut(s)	1556
AccII	CGCG	1 cut(s)	1479
AciI	CCGC	2 cut(s)	165, 275
AclI	AACGTT	1 cut(s)	1614
AclWI	GGATC	1 cut(s)	762
AcoI	YGGCCR	3 cut(s)	1447, 1463, 1467
AdeI	CACNNNGTG	1 cut(s)	883
AfaI	GTAC	1 cut(s)	364
AfiI	CCNNNNNNNGG	3 cut(s)	91, 1418, 1556
AgsI	TTSAA	5 cut(s)	289, 589, 897, 989, 1041
AjnI	CCWGG	1 cut(s)	1015
AjuI	GAANNNNNNNTTGG	2 cut(s)	902, 934
AluBI	AGCT	6 cut(s)	107, 225, 603, 730, 1076, 1473
AluI	AGCT	6 cut(s)	107, 225, 603, 730, 1076, 1473
Alw21I	GWGCWC	1 cut(s)	507
Alw26I	GTCTC	2 cut(s)	512, 1178
AlwI	GGATC	1 cut(s)	762
Ama87I	CYCGRG	2 cut(s)	131, 1586
AoxI	GGCC	5 cut(s)	1228, 1447, 1463, 1467, 1561
ApeKI	GCWGC	5 cut(s)	473, 703, 1073, 1147, 1339
Asp700I	GAANNNNTTC	1 cut(s)	317
AspLEI	GCGC	1 cut(s)	97
AspS9I	GGNCC	2 cut(s)	58, 580
AsuC2I	CCSGG	4 cut(s)	190, 1565, 1587, 1588
AsuHPI	GGTGA	6 cut(s)	154, 160, 316, 604, 1341, 1584
AvaI	CYCGRG	2 cut(s)	131, 1586
AvaII	GGWCC	2 cut(s)	58, 580
BaeI	ACNNNNGTAYC	4 cut(s)	354, 354, 387, 387
BalI	TGGCCA	1 cut(s)	1449
BarI	GAAGNNNNNNTAC	4 cut(s)	186, 218, 733, 765
Bbv12I	GWGCWC	1 cut(s)	507
BbvI	GCAGC	5 cut(s)	460, 690, 1085, 1159, 1326
BccI	CCATC	2 cut(s)	138, 1518
BceAI	ACGGC	1 cut(s)	1478
BciT130I	CCWGG	1 cut(s)	1017
BciVI	GTATCC	1 cut(s)	382
BclI	TGATCA	2 cut(s)	207, 1260
BcnI	CCSGG	4 cut(s)	190, 1565, 1587, 1588
BcoDI	GTCTC	2 cut(s)	512, 1178
BfaI	CTAG	4 cut(s)	686, 1049, 1266, 1418
BfmI	CTRYAG	1 cut(s)	1431
BfoI	RGCGCY	1 cut(s)	98
BfuAI	ACCTGC	1 cut(s)	490
BfuI	GTATCC	1 cut(s)	382
BglII	AGATCT	1 cut(s)	250
BisI	GCNGC	6 cut(s)	275, 474, 704, 1074, 1148, 1340
BlsI	GCNGC	6 cut(s)	276, 475, 705, 1075, 1149, 1341
Bme1390I	CCNGG	5 cut(s)	190, 1017, 1565, 1587, 1588
Bme18I	GGWCC	2 cut(s)	58, 580
BmeT110I	CYCGRG	2 cut(s)	131, 1586
BmgT120I	GGNCC	2 cut(s)	58, 580
BmrFI	CCNGG	5 cut(s)	190, 1017, 1565, 1587, 1588
BmsI	GCATC	4 cut(s)	238, 556, 765, 964
BpmI	CTGGAG	1 cut(s)	455
BpuMI	CCSGG	4 cut(s)	190, 1565, 1587, 1588
Bsa29I	ATCGAT	1 cut(s)	142
BsaI	GGTCTC	1 cut(s)	1178
BsaJI	CCNNGG	5 cut(s)	69, 189, 978, 1564, 1586
BsaXI	ACNNNNNCTCC	2 cut(s)	50, 80
Bsc4I	CCNNNNNNNGG	3 cut(s)	91, 1418, 1556
Bse118I	RCCGGY	1 cut(s)	1465
Bse1I	ACTGG	3 cut(s)	627, 807, 1550
BseBI	CCWGG	1 cut(s)	1017
BseCI	ATCGAT	1 cut(s)	142
BseDI	CCNNGG	5 cut(s)	69, 189, 978, 1564, 1586
BseGI	GGATG	2 cut(s)	520, 979
BseLI	CCNNNNNNNGG	3 cut(s)	91, 1418, 1556
BseNI	ACTGG	3 cut(s)	627, 807, 1550
BseRI	GAGGAG	2 cut(s)	55, 149
BseX3I	CGGCCG	1 cut(s)	1463
BseXI	GCAGC	5 cut(s)	460, 690, 1085, 1159, 1326
BseYI	CCCAGC	1 cut(s)	293
BsgI	GTGCAG	1 cut(s)	361
Bsh1236I	CGCG	1 cut(s)	1479
Bsh1285I	CGRYCG	1 cut(s)	1466
BshFI	GGCC	5 cut(s)	1230, 1449, 1465, 1469, 1563
BshVI	ATCGAT	1 cut(s)	142
BsiEI	CGRYCG	1 cut(s)	1466
BsiHKAI	GWGCWC	1 cut(s)	507
BsiHKCI	CYCGRG	2 cut(s)	131, 1586
BsiSI	CCGG	5 cut(s)	189, 1144, 1466, 1564, 1587
BslFI	GGGAC	2 cut(s)	458, 1619
BslI	CCNNNNNNNGG	3 cut(s)	91, 1418, 1556
BsmAI	GTCTC	2 cut(s)	512, 1178
BsmFI	GGGAC	2 cut(s)	458, 1619
BsmI	GAATGC	2 cut(s)	828, 1538
BsnI	GGCC	5 cut(s)	1230, 1449, 1465, 1469, 1563
Bso31I	GGTCTC	1 cut(s)	1178
BsoBI	CYCGRG	2 cut(s)	131, 1586
Bsp1286I	GDGCHC	1 cut(s)	507
BspACI	CCGC	2 cut(s)	165, 275
BspANI	GGCC	5 cut(s)	1230, 1449, 1465, 1469, 1563
BspDI	ATCGAT	1 cut(s)	142
BspFNI	CGCG	1 cut(s)	1479
BspHI	TCATGA	3 cut(s)	333, 1176, 1257
BspMI	ACCTGC	1 cut(s)	490
BspPI	GGATC	1 cut(s)	762
BspQI	GCTCTTC	1 cut(s)	1063
BspTNI	GGTCTC	1 cut(s)	1178
BsrFI	RCCGGY	1 cut(s)	1465
BsrI	ACTGG	3 cut(s)	627, 807, 1550
BssAI	RCCGGY	1 cut(s)	1465
BssECI	CCNNGG	5 cut(s)	69, 189, 978, 1564, 1586
BssT1I	CCWWGG	1 cut(s)	978
Bst2UI	CCWGG	1 cut(s)	1017
Bst4CI	ACNGT	6 cut(s)	536, 838, 1013, 1279, 1297, 1507
Bst6I	CTCTTC	1 cut(s)	1063
BstAPI	GCANNNNNTGC	2 cut(s)	461, 470
BstC8I	GCNNGC	6 cut(s)	227, 676, 915, 1245, 1467, 1471
BstDEI	CTNAG	1 cut(s)	707
BstDSI	CCRYGG	1 cut(s)	69
BstEII	GGTNACC	1 cut(s)	1590
BstF5I	GGATG	2 cut(s)	520, 979
BstFNI	CGCG	1 cut(s)	1479
BstH2I	RGCGCY	1 cut(s)	98
BstHHI	GCGC	1 cut(s)	97
BstMAI	GTCTC	2 cut(s)	512, 1178
BstMCI	CGRYCG	1 cut(s)	1466
BstMWI	GCNNNNNNNGC	2 cut(s)	461, 470
BstNI	CCWGG	1 cut(s)	1017
BstNSI	RCATGY	2 cut(s)	917, 1372
BstPI	GGTNACC	1 cut(s)	1590
BstSCI	CCNGG	5 cut(s)	188, 1015, 1563, 1585, 1586
BstSFI	CTRYAG	1 cut(s)	1431
BstUI	CGCG	1 cut(s)	1479
BstV1I	GCAGC	5 cut(s)	460, 690, 1085, 1159, 1326
BstX2I	RGATCY	1 cut(s)	250
BstYI	RGATCY	1 cut(s)	250
BstZI	CGGCCG	1 cut(s)	1463
Bsu15I	ATCGAT	1 cut(s)	142
BsuI	GTATCC	1 cut(s)	382
BsuRI	GGCC	5 cut(s)	1230, 1449, 1465, 1469, 1563
BsuTUI	ATCGAT	1 cut(s)	142
BtgI	CCRYGG	1 cut(s)	69
BtgZI	GCGATG	1 cut(s)	1496
BtsCI	GGATG	2 cut(s)	520, 979
BtsI	GCAGTG	1 cut(s)	1038
BtsIMutI	CAGTG	6 cut(s)	250, 834, 1032, 1038, 1302, 1625
BveI	ACCTGC	1 cut(s)	490
Cac8I	GCNNGC	6 cut(s)	227, 676, 915, 1245, 1467, 1471
CciI	TCATGA	3 cut(s)	333, 1176, 1257
CfoI	GCGC	1 cut(s)	97
Cfr10I	RCCGGY	1 cut(s)	1465
Cfr13I	GGNCC	2 cut(s)	58, 580
Cfr9I	CCCGGG	1 cut(s)	1586
ClaI	ATCGAT	1 cut(s)	142
CseI	GACGC	1 cut(s)	1535
Csp6I	GTAC	1 cut(s)	363
CviAII	CATG	9 cut(s)	22, 334, 781, 914, 1127, 1177, 1258, 1369, 1543
CviQI	GTAC	1 cut(s)	363
DdeI	CTNAG	1 cut(s)	707
DraIII	CACNNNGTG	1 cut(s)	883
EaeI	YGGCCR	3 cut(s)	1447, 1463, 1467
EagI	CGGCCG	1 cut(s)	1463
Eam1104I	CTCTTC	1 cut(s)	1063
EarI	CTCTTC	1 cut(s)	1063
EclXI	CGGCCG	1 cut(s)	1463
Eco130I	CCWWGG	1 cut(s)	978
Eco31I	GGTCTC	1 cut(s)	1178
Eco47I	GGWCC	2 cut(s)	58, 580
Eco52I	CGGCCG	1 cut(s)	1463
Eco88I	CYCGRG	2 cut(s)	131, 1586
Eco91I	GGTNACC	1 cut(s)	1590
EcoO65I	GGTNACC	1 cut(s)	1590
EcoRII	CCWGG	1 cut(s)	1015
EcoT14I	CCWWGG	1 cut(s)	978
ErhI	CCWWGG	1 cut(s)	978
FaeI	CATG	9 cut(s)	25, 337, 784, 917, 1130, 1180, 1261, 1372, 1546
FalI	AAGNNNNNCTT	4 cut(s)	305, 337, 1060, 1092
FaqI	GGGAC	2 cut(s)	458, 1619
FatI	CATG	9 cut(s)	21, 333, 780, 913, 1126, 1176, 1257, 1368, 1542
FbaI	TGATCA	2 cut(s)	207, 1260
Fnu4HI	GCNGC	6 cut(s)	275, 474, 704, 1074, 1148, 1340
FokI	GGATG	2 cut(s)	527, 986
FseI	GGCCGGCC	1 cut(s)	1469
Fsp4HI	GCNGC	6 cut(s)	275, 474, 704, 1074, 1148, 1340
FspBI	CTAG	4 cut(s)	686, 1049, 1266, 1418
GlaI	GCGC	1 cut(s)	96
GluI	GCNGC	6 cut(s)	275, 474, 704, 1074, 1148, 1340
GsaI	CCCAGC	1 cut(s)	297
GsuI	CTGGAG	1 cut(s)	455
HaeII	RGCGCY	1 cut(s)	98
HaeIII	GGCC	5 cut(s)	1230, 1449, 1465, 1469, 1563
HapII	CCGG	5 cut(s)	189, 1144, 1466, 1564, 1587
HgaI	GACGC	1 cut(s)	1535
HhaI	GCGC	1 cut(s)	97
Hin1II	CATG	9 cut(s)	25, 337, 784, 917, 1130, 1180, 1261, 1372, 1546
Hin6I	GCGC	1 cut(s)	95
HinP1I	GCGC	1 cut(s)	95
HincII	GTYRAC	2 cut(s)	328, 562
HindII	GTYRAC	2 cut(s)	328, 562
HindIII	AAGCTT	1 cut(s)	728
HinfI	GANTC	5 cut(s)	139, 155, 482, 623, 1427
HpaI	GTTAAC	2 cut(s)	328, 562
HpaII	CCGG	5 cut(s)	189, 1144, 1466, 1564, 1587
HphI	GGTGA	6 cut(s)	154, 160, 316, 604, 1341, 1584
Hpy166II	GTNNAC	3 cut(s)	328, 562, 1218
Hpy188I	TCNGA	6 cut(s)	58, 207, 600, 1307, 1381, 1488
Hpy188III	TCNNGA	8 cut(s)	131, 334, 434, 512, 758, 897, 1177, 1258
Hpy8I	GTNNAC	3 cut(s)	328, 562, 1218
Hpy99I	CGWCG	1 cut(s)	1464
HpyAV	CCTTC	1 cut(s)	735
HpyCH4III	ACNGT	6 cut(s)	536, 838, 1013, 1279, 1297, 1507
HpyCH4IV	ACGT	2 cut(s)	494, 1614
HpyF10VI	GCNNNNNNNGC	2 cut(s)	461, 470
HpyF3I	CTNAG	1 cut(s)	707
HpySE526I	ACGT	2 cut(s)	494, 1614
Hsp92II	CATG	9 cut(s)	25, 337, 784, 917, 1130, 1180, 1261, 1372, 1546
HspAI	GCGC	1 cut(s)	95
KroI	GCCGGC	1 cut(s)	1465
KroNI	GCCGGC	1 cut(s)	1467
Ksp22I	TGATCA	2 cut(s)	207, 1260
KspAI	GTTAAC	2 cut(s)	328, 562
LguI	GCTCTTC	1 cut(s)	1063
LmnI	GCTCC	1 cut(s)	102
Lsp1109I	GCAGC	5 cut(s)	460, 690, 1085, 1159, 1326
LweI	GCATC	4 cut(s)	238, 556, 765, 964
MaeI	CTAG	4 cut(s)	686, 1049, 1266, 1418
MaeII	ACGT	2 cut(s)	494, 1614
MaeIII	GTNAC	6 cut(s)	36, 861, 883, 901, 1007, 1590
MboII	GAAGA	6 cut(s)	119, 194, 260, 946, 1080, 1475
MflI	RGATCY	1 cut(s)	250
MhlI	GDGCHC	1 cut(s)	507
MlsI	TGGCCA	1 cut(s)	1449
MluCI	AATT	3 cut(s)	404, 809, 1134
MluNI	TGGCCA	1 cut(s)	1449
MlyI	GAGTC	1 cut(s)	164
MmeI	TCCRAC	2 cut(s)	399, 1520
Mox20I	TGGCCA	1 cut(s)	1449
MroNI	GCCGGC	1 cut(s)	1465
MroXI	GAANNNNTTC	1 cut(s)	317
MscI	TGGCCA	1 cut(s)	1449
MseI	TTAA	4 cut(s)	327, 411, 561, 1109
MslI	CAYNNNNRTG	1 cut(s)	344
Msp20I	TGGCCA	1 cut(s)	1449
MspI	CCGG	5 cut(s)	189, 1144, 1466, 1564, 1587
MspR9I	CCNGG	5 cut(s)	190, 1017, 1565, 1587, 1588
Mva1269I	GAATGC	2 cut(s)	828, 1538
MvaI	CCWGG	1 cut(s)	1017
MvnI	CGCG	1 cut(s)	1479
MwoI	GCNNNNNNNGC	2 cut(s)	461, 470
NaeI	GCCGGC	1 cut(s)	1467
NciI	CCSGG	4 cut(s)	190, 1565, 1587, 1588
NgoMIV	GCCGGC	1 cut(s)	1465
NlaIII	CATG	9 cut(s)	25, 337, 784, 917, 1130, 1180, 1261, 1372, 1546
NmuCI	GTSAC	4 cut(s)	861, 883, 1007, 1590
NspI	RCATGY	2 cut(s)	917, 1372
PaeI	GCATGC	1 cut(s)	917
PaeR7I	CTCGAG	1 cut(s)	131
PagI	TCATGA	3 cut(s)	333, 1176, 1257
PaqCI	CACCTGC	1 cut(s)	490
PciSI	GCTCTTC	1 cut(s)	1063
PcsI	WCGNNNNNNNCGW	1 cut(s)	1519
PctI	GAATGC	2 cut(s)	828, 1538
PdiI	GCCGGC	1 cut(s)	1467
PdmI	GAANNNNTTC	1 cut(s)	317
PfeI	GAWTC	4 cut(s)	139, 482, 623, 1427
PflMI	CCANNNNNTGG	1 cut(s)	1556
PfoI	TCCNGGA	1 cut(s)	1015
PkrI	GCNGC	6 cut(s)	276, 475, 705, 1075, 1149, 1341
PleI	GAGTC	1 cut(s)	163
PpsI	GAGTC	1 cut(s)	163
PsiI	TTATAA	2 cut(s)	1157, 1328
Psp1406I	AACGTT	1 cut(s)	1614
Psp6I	CCWGG	1 cut(s)	1015
PspEI	GGTNACC	1 cut(s)	1590
PspFI	CCCAGC	1 cut(s)	293
PspGI	CCWGG	1 cut(s)	1015
PspPI	GGNCC	2 cut(s)	58, 580
PsuI	RGATCY	1 cut(s)	250
RigI	GGCCGGCC	1 cut(s)	1469
RsaI	GTAC	1 cut(s)	364
RsaNI	GTAC	1 cut(s)	363
RseI	CAYNNNNRTG	1 cut(s)	344
SapI	GCTCTTC	1 cut(s)	1063
SaqAI	TTAA	4 cut(s)	327, 411, 561, 1109
SatI	GCNGC	6 cut(s)	275, 474, 704, 1074, 1148, 1340
Sau96I	GGNCC	2 cut(s)	58, 580
SchI	GAGTC	1 cut(s)	164
ScrFI	CCNGG	5 cut(s)	190, 1017, 1565, 1587, 1588
SduI	GDGCHC	1 cut(s)	507
SfaNI	GCATC	4 cut(s)	238, 556, 765, 964
SfcI	CTRYAG	1 cut(s)	1431
Sfr274I	CTCGAG	1 cut(s)	131
SinI	GGWCC	2 cut(s)	58, 580
SlaI	CTCGAG	1 cut(s)	131
SmaI	CCCGGG	1 cut(s)	1588
SmiMI	CAYNNNNRTG	1 cut(s)	344
SmlI	CTYRAG	1 cut(s)	131
SmoI	CTYRAG	1 cut(s)	131
SphI	GCATGC	1 cut(s)	917
Sse9I	AATT	3 cut(s)	404, 809, 1134
SsiI	CCGC	2 cut(s)	165, 275
SspI	AATATT	1 cut(s)	468
SspMI	CTAG	4 cut(s)	686, 1049, 1266, 1418
StyD4I	CCNGG	5 cut(s)	188, 1015, 1563, 1585, 1586
StyI	CCWWGG	1 cut(s)	978
TaaI	ACNGT	6 cut(s)	536, 838, 1013, 1279, 1297, 1507
TaiI	ACGT	2 cut(s)	497, 1617
TaqI	TCGA	6 cut(s)	77, 132, 142, 158, 1103, 1459
TaqII	GACCGA	1 cut(s)	110
TasI	AATT	3 cut(s)	404, 809, 1134
TauI	GCSGC	1 cut(s)	277
TfiI	GAWTC	4 cut(s)	139, 482, 623, 1427
Tru1I	TTAA	4 cut(s)	327, 411, 561, 1109
Tru9I	TTAA	4 cut(s)	327, 411, 561, 1109
TscAI	CASTG	6 cut(s)	250, 841, 1032, 1038, 1302, 1625
TseFI	GTSAC	4 cut(s)	861, 883, 1007, 1590
TseI	GCWGC	5 cut(s)	473, 703, 1073, 1147, 1339
Tsp45I	GTSAC	4 cut(s)	861, 883, 1007, 1590
TspDTI	ATGAA	4 cut(s)	95, 322, 1069, 1531
TspGWI	ACGGA	4 cut(s)	58, 494, 767, 902
TspMI	CCCGGG	1 cut(s)	1586
TspRI	CASTG	6 cut(s)	250, 841, 1032, 1038, 1302, 1625
Van91I	CCANNNNNTGG	1 cut(s)	1556
VpaK11BI	GGWCC	2 cut(s)	58, 580
XceI	RCATGY	2 cut(s)	917, 1372
XhoI	CTCGAG	1 cut(s)	131
XmaI	CCCGGG	1 cut(s)	1586
XmnI	GAANNNNTTC	1 cut(s)	317
XspI	CTAG	4 cut(s)	686, 1049, 1266, 1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.