Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006287

Physical Location & Seq

Genomic Coordinates Forward (+)

1653264 .. 1657222

Gene Structure 3959 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G05670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

ATGGGAAAGAGAAACACGTCTTGGGCTAGAAATTCTAATAGAAAGGTTAGATCTAAGGATAAGGGTTCAGATGAGTCAGATGAGGATTATGTGATTTCCGACGAGGATGAAGAAGAGTCTGAGGCTGATCTCAAGGAGGAGTATGCCTCATCTGTTGACGGTGAGCCATCCTTTGATGGTTTTAATGGGTCTGATGCGGTGGAGGATGAGGAATTAGATGAAGTGGAAGAGGAAGATGTGATGCTGAGGAATGTTGAATGGCCAAAAGTGAAGACTGGTCCTCGTGGTAATCGAAAAATCACGGGATGTAAGTCAAGAAAGACGAACCAGGTGGTTGTGTCTGACAACGAGGATGTGGATCTCGATGATGCGGATGATGAAGATGATGAGATAAGGAATTCAAGGAATGCTGTTGGGAAAAGTGGGTCTTTGGATGGAGAGAAACACCAAAGGATAGGTTTAGGAAAGCGAAGGAGAGTTTTCTATGAGATAGAGGATGAAGATGGAGACTATCCAGAGGAGGATGGTGATGAAGAGGAAGAGAGGGATGTGGAAAATGTGGATTCAAATTCTTTGCATGATGGTGAAGACGGGAAGATGGCATTGGAAGAGCAGGACAATGTGTCACACGAGACAGAAAAGGAAGATGATGGAGATTATGAGGATGAGGATGAGGATGATGATGGCGATGAAGATTTTACCGCAGATGAAGATGTCTCATTAGATGAGGAAGAGGAGGAAGAAATCATTGCATGTAACAAAAATGCACTGAAGGTTTGTAAGGGAAACAAGCGAAAGCGAAGATCTGGAGAAGGGCGTAAAAGAAGGAAGAAATGCTCTGTTGCAAAAACCCGTTTAACAAGGGGAAGAAAGAGACGTGTGAGAAACACAAAGAAAGGAGTTGATGAAGATGATGATGATTTTGTAGATGACTGCTTACCTGCAAGAAAGAAGGCGAAGACAAAGTCATCAAGGCCAAGGCCAAGGCGTCGGTGTACCGTTCCATCAGATTCAGACGTTGCATCGTCTGGAGAATCCGACTATGAGTATACAATCTCGGAGGAGGAAAGAGAGCAGATAAGAGAAGCCGGTAGTTTGTTGAAAAGTAGTGTGAACCATGCATCATCTATAAGACAAACCACGGTCAATAAGGATTTGCCACAGCTTCGTAAGTCTCCTGTGAAGAAAGGTGAAAAGAAGGTAGAGCTAGTGAAAAGAGATGTGATAAAAAACGTTTGTGGGATTTGTCTGTCTGAGGAAGACATGCGGAGATTGAAGGGAACATTGGACTGCTGTAGCCATTACTTTTGTTTCACTTGCATAATGGAGTGGTCGAAAGTAGAATCTCGCTGCCCACTCTGCAAGCAGCGGTTCAGAACAATCAGTAAGCCTGCAAGATCTACACCTGGAGTAGATTTGAGAGAAGTTGTGATACCTGTACCTGAACGTGATCAGGTCTATCAACCTACTGAAGAAGAGTTGAGGAGTTATCTCGATCCCTATGAAAATATAATATGCACGGAATGTCACCAAGGTGATGATGATGGGCTTATGTTGCTTTGTGATCTTTGTGATTCATCTGCCCATACGTACTGTGTTGGTCTTGGGAGGGAAGTACCTGAAGGAAACTGGTACTGTGAAGGTTGTAGACCCGTTGCACTTGGATCAGCTAGTTCCCAAACGCATATTATATCCGAGCAACAAAGGGGTAGTGGCTTTTACAGTAGACCGTCACCTCTTGTAGTTTCAGGGCAATATCAAGATGTGTCTTTAATAGTCTCCCCACGTACACCATTTTTCAATGGAGAGAACCTATTTTCTCCAAGGATTCCTAATGGTGATGCTCAAGGTTCTTCTCCATCCGGCTTAGGGGCAACCACATTATCCAGAAGAAGGACGCTTCACAGACACATACAAAATATTATCAACGGTGATAGACTTATTAATATGGGTGCTAGAACTGGTGGAACATCGAGTGATGGTTTCGTGACTACACAAATAGGTCATGGCAGAACAATCGACCCATCTCAGCCTGTAGCGAGCCAAGAAACAGGGATATCGTTGTATGCAATCTCTGAGGAAAGACTACCCAACAACAATTCATTGATTTCTGCCCATGACCCTGAGCTTTTGTCTCCAAAGTTAGATGAATTTGGAAGTGAAGAAGCATTCAGACGTTTGTCTAATAATACATTTCTTGGTGAGCGACCTATCGATTTAGGATTCCATCATGGACTGGCTCAGGGTGATCCCTTGGTTAGTAATCAACAACGTCTACACAGCCACATGCCAAACACAATGTCTTCCATGGCAGGAGAACGACTGCAAGAAAGAGTTAAAGCCCATCTCAAAAACTTGTCCAGTCAAAACGACTTAGGTCAAACCACTTTCGACGAGATTTCCACGTGCTCAATACACACGATACTGGCAGCTTGTGGGCTTGAACACGAGAGCAGTGAAGTCCATCTTGTTCCGCCACCAGTGACGTGTACTCACCATCATATGACACCTGGCAGCAGCAGCAGTAGCAGTAGTGGTAGTAGCCTGATGAAAGGGTGTTGCTATTCTTGTTTTGATTCATTTGTAGAAGATGTAGTTAAGATGATTCTAGACACAAGACAACCCCATTGGTTGAGTCTAGGGCTCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008623 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016590 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019899 GO:0019904 GO:0031010 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070063 GO:0070603 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD zf-RING_2

Protein Analysis

883

Amino Acids

98.78

Weight (kDa)

4.92

Isoelectric Point (pI)

63.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	412 - 455	8.6e-07	Ring finger domain
PHD	PF00628	506 - 549	4.3e-08	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05670 AT3G05670 AT3G05670
fragaria_vesca	FvH4_6g07080
malus_domestica	MD04G1196300.v1.1 MD12G1209300.v1.1
prunus_persica	Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1
pyrus_communis	pycom04g17360 pycom12g19660
rosa_chinensis	RchiOBHm_Chr3g0456661
rosa_laevigata	RLG00000025286
rosa_multiflora	Rmu_co8126688.1_g000001 Rmu_sc0000133.1_g000031
rosa_roxburghii	Rroxscaffold_11G00450420 Rroxscaffold_6G00422560
rosa_rugosa	Rorug03G0014500 Rorug03G0014600 Rorug03G0014700 Rorug03G0014800.1
rosa_samantha	Rh3AG075300 Rh3BG077200 Rh3CG076900 Rh3DG078900
rosa_wichuraiana	Rw3G006450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	949
AccI	GTMKAC	4 cut(s)	1049, 1648, 1726, 2275
AciI	CCGC	6 cut(s)	197, 371, 702, 1267, 1369, 2474
AclI	AACGTT	1 cut(s)	1233
AclWI	GGATC	4 cut(s)	366, 1490, 1672, 2243
AcoI	YGGCCR	1 cut(s)	260
AcsI	RAATTY	4 cut(s)	31, 397, 568, 2150
AcuI	CTGAAG	3 cut(s)	791, 1491, 1641
AcvI	CACGTG	1 cut(s)	2406
AcyI	GRCGYC	1 cut(s)	988
AfaI	GTAC	7 cut(s)	997, 1440, 1592, 1617, 1634, 1789, 2491
AfiI	CCNNNNNNNGG	2 cut(s)	1869, 1893
AflIII	ACRYGT	3 cut(s)	15, 877, 2486
AgsI	TTSAA	7 cut(s)	257, 402, 567, 1102, 1276, 1801, 2444
AhdI	GACNNNNNGTC	1 cut(s)	622
AjiI	CACGTC	3 cut(s)	18, 878, 2487
AjnI	CCWGG	3 cut(s)	327, 1405, 2509
AjuI	GAANNNNNNNTTGG	5 cut(s)	36, 587, 619, 1268, 1300
AleI	CACNNNNGTG	1 cut(s)	1533
AluBI	AGCT	5 cut(s)	1165, 1207, 1670, 2128, 2432
AluI	AGCT	5 cut(s)	1165, 1207, 1670, 2128, 2432
Alw21I	GWGCWC	1 cut(s)	2411
Alw26I	GTCTC	7 cut(s)	501, 626, 721, 868, 1179, 1783, 2139
AlwI	GGATC	4 cut(s)	366, 1490, 1672, 2243
AoxI	GGCC	3 cut(s)	260, 974, 980
ApeKI	GCWGC	6 cut(s)	1350, 1366, 2429, 2514, 2517, 2520
ApoI	RAATTY	4 cut(s)	31, 397, 568, 2150
ArsI	GACNNNNNNTTYG	4 cut(s)	950, 982, 2285, 2317
AseI	ATTAAT	1 cut(s)	1944
AspS9I	GGNCC	1 cut(s)	278
AvaII	GGWCC	1 cut(s)	278
BalI	TGGCCA	1 cut(s)	262
BanII	GRGCYC	1 cut(s)	2646
BarI	GAAGNNNNNNTAC	2 cut(s)	1416, 1448
BauI	CACGAG	3 cut(s)	282, 629, 2447
BbrPI	CACGTG	1 cut(s)	2406
BbsI	GAAGAC	5 cut(s)	278, 594, 965, 1266, 2295
Bbv12I	GWGCWC	1 cut(s)	2411
BbvCI	CCTCAGC	1 cut(s)	245
BbvI	GCAGC	6 cut(s)	1337, 1378, 2441, 2526, 2529, 2532
BcgI	CGANNNNNNTGC	2 cut(s)	1999, 2033
BciT130I	CCWGG	3 cut(s)	329, 1407, 2511
BclI	TGATCA	1 cut(s)	1450
BcoDI	GTCTC	7 cut(s)	501, 626, 721, 868, 1179, 1783, 2139
BfaI	CTAG	6 cut(s)	27, 1208, 1671, 1956, 2609, 2639
BfmI	CTRYAG	2 cut(s)	1294, 2034
BfuAI	ACCTGC	1 cut(s)	949
BglII	AGATCT	3 cut(s)	50, 803, 1397
BisI	GCNGC	6 cut(s)	1351, 1367, 2430, 2515, 2518, 2521
BlsI	GCNGC	6 cut(s)	1352, 1368, 2431, 2516, 2519, 2522
Bme1390I	CCNGG	3 cut(s)	329, 1407, 2511
Bme18I	GGWCC	1 cut(s)	278
BmeRI	GACNNNNNGTC	1 cut(s)	622
BmgBI	CACGTC	3 cut(s)	18, 878, 2487
BmgT120I	GGNCC	1 cut(s)	278
BmiI	GGNNCC	1 cut(s)	2645
BmrFI	CCNGG	3 cut(s)	329, 1407, 2511
BmsI	GCATC	6 cut(s)	184, 231, 358, 1031, 1130, 1831
BoxI	GACNNNNGTC	2 cut(s)	2179, 2376
BpiI	GAAGAC	5 cut(s)	278, 594, 965, 1266, 2295
BplI	GAGNNNNNCTC	2 cut(s)	131, 163
BpmI	CTGGAG	3 cut(s)	828, 1050, 1428
Bpu10I	CCTNAGC	4 cut(s)	245, 1867, 2124, 2241
BpuEI	CTTGAG	2 cut(s)	116, 1830
Bsa29I	ATCGAT	1 cut(s)	2214
BsaAI	YACGTR	3 cut(s)	1590, 1787, 2406
BsaBI	GATNNNNATC	1 cut(s)	357
BsaHI	GRCGYC	1 cut(s)	988
BsaJI	CCNNGG	7 cut(s)	977, 983, 1140, 1531, 1823, 2253, 2307
Bsc4I	CCNNNNNNNGG	2 cut(s)	1869, 1893
Bse118I	RCCGGY	1 cut(s)	1088
Bse1I	ACTGG	7 cut(s)	280, 1634, 1966, 2241, 2361, 2430, 2480
Bse3DI	GCAATG	1 cut(s)	747
Bse8I	GATNNNNATC	1 cut(s)	357
BseBI	CCWGG	3 cut(s)	329, 1407, 2511
BseCI	ATCGAT	1 cut(s)	2214
BseDI	CCNNGG	7 cut(s)	977, 983, 1140, 1531, 1823, 2253, 2307
BseJI	GATNNNNATC	1 cut(s)	357
BseLI	CCNNNNNNNGG	2 cut(s)	1869, 1893
BseMI	GCAATG	1 cut(s)	747
BseMII	CTCAG	7 cut(s)	111, 236, 1245, 2042, 2067, 2115, 2255
BseNI	ACTGG	7 cut(s)	280, 1634, 1966, 2241, 2361, 2430, 2480
BseRI	GAGGAG	5 cut(s)	152, 533, 749, 1076, 1498
BseXI	GCAGC	6 cut(s)	1337, 1378, 2441, 2526, 2529, 2532
BshFI	GGCC	3 cut(s)	262, 976, 982
BshVI	ATCGAT	1 cut(s)	2214
BsiHKAI	GWGCWC	1 cut(s)	2411
BsiSI	CCGG	2 cut(s)	1089, 1863
BslI	CCNNNNNNNGG	2 cut(s)	1869, 1893
BsmAI	GTCTC	7 cut(s)	501, 626, 721, 868, 1179, 1783, 2139
BsmBI	CGTCTC	1 cut(s)	868
BsmI	GAATGC	2 cut(s)	412, 2168
BsnI	GGCC	3 cut(s)	262, 976, 982
Bsp1286I	GDGCHC	2 cut(s)	2411, 2646
Bsp19I	CCATGG	1 cut(s)	2307
BspACI	CCGC	6 cut(s)	197, 371, 702, 1267, 1369, 2474
BspANI	GGCC	3 cut(s)	262, 976, 982
BspCNI	CTCAG	7 cut(s)	112, 237, 1246, 2041, 2068, 2116, 2254
BspDI	ATCGAT	1 cut(s)	2214
BspLI	GGNNCC	1 cut(s)	2645
BspMI	ACCTGC	1 cut(s)	949
BspPI	GGATC	4 cut(s)	366, 1490, 1672, 2243
BspQI	GCTCTTC	1 cut(s)	603
BsrDI	GCAATG	1 cut(s)	747
BsrFI	RCCGGY	1 cut(s)	1088
BsrI	ACTGG	7 cut(s)	280, 1634, 1966, 2241, 2361, 2430, 2480
BssAI	RCCGGY	1 cut(s)	1088
BssECI	CCNNGG	7 cut(s)	977, 983, 1140, 1531, 1823, 2253, 2307
BssNAI	GTATAC	1 cut(s)	1050
BssNI	GRCGYC	1 cut(s)	988
BssSI	CACGAG	3 cut(s)	282, 629, 2447
BssT1I	CCWWGG	6 cut(s)	977, 983, 1531, 1823, 2253, 2307
Bst1107I	GTATAC	1 cut(s)	1050
Bst2BI	CACGAG	3 cut(s)	282, 629, 2447
Bst2UI	CCWGG	3 cut(s)	329, 1407, 2511
Bst4CI	ACNGT	8 cut(s)	161, 1000, 1144, 1595, 1637, 1724, 1731, 1931
Bst6I	CTCTTC	7 cut(s)	108, 222, 528, 534, 603, 726, 1470
BstACI	GRCGYC	1 cut(s)	988
BstBAI	YACGTR	3 cut(s)	1590, 1787, 2406
BstC8I	GCNNGC	3 cut(s)	1364, 1392, 2041
BstDSI	CCRYGG	2 cut(s)	1140, 2307
BstMAI	GTCTC	7 cut(s)	501, 626, 721, 868, 1179, 1783, 2139
BstMWI	GCNNNNNNNGC	4 cut(s)	1359, 1555, 2520, 2526
BstNI	CCWGG	3 cut(s)	329, 1407, 2511
BstNSI	RCATGY	3 cut(s)	756, 1267, 2290
BstPAI	GACNNNNGTC	2 cut(s)	2179, 2376
BstSCI	CCNGG	3 cut(s)	327, 1405, 2509
BstSFI	CTRYAG	2 cut(s)	1294, 2034
BstSNI	TACGTA	1 cut(s)	1590
BstV1I	GCAGC	6 cut(s)	1337, 1378, 2441, 2526, 2529, 2532
BstV2I	GAAGAC	5 cut(s)	278, 594, 965, 1266, 2295
BstX2I	RGATCY	4 cut(s)	50, 358, 803, 1397
BstYI	RGATCY	4 cut(s)	50, 358, 803, 1397
BstZ17I	GTATAC	1 cut(s)	1050
Bsu15I	ATCGAT	1 cut(s)	2214
BsuRI	GGCC	3 cut(s)	262, 976, 982
BsuTUI	ATCGAT	1 cut(s)	2214
BtgI	CCRYGG	2 cut(s)	1140, 2307
BtgZI	GCGATG	1 cut(s)	702
BtrI	CACGTC	3 cut(s)	18, 878, 2487
BtsI	GCAGTG	1 cut(s)	2461
BtsIMutI	CAGTG	3 cut(s)	767, 2461, 2487
BveI	ACCTGC	1 cut(s)	949
Cac8I	GCNNGC	3 cut(s)	1364, 1392, 2041
Cfr10I	RCCGGY	1 cut(s)	1088
Cfr13I	GGNCC	1 cut(s)	278
ClaI	ATCGAT	1 cut(s)	2214
CseI	GACGC	2 cut(s)	977, 1906
CsiI	ACCWGGT	1 cut(s)	327
Csp6I	GTAC	7 cut(s)	996, 1439, 1591, 1616, 1633, 1788, 2490
CviAII	CATG	9 cut(s)	578, 753, 1118, 1264, 2006, 2117, 2231, 2287, 2308
CviQI	GTAC	7 cut(s)	996, 1439, 1591, 1616, 1633, 1788, 2490
DriI	GACNNNNNGTC	1 cut(s)	622
EaeI	YGGCCR	1 cut(s)	260
Eam1104I	CTCTTC	7 cut(s)	108, 222, 528, 534, 603, 726, 1470
Eam1105I	GACNNNNNGTC	1 cut(s)	622
EarI	CTCTTC	7 cut(s)	108, 222, 528, 534, 603, 726, 1470
EciI	GGCGGA	1 cut(s)	2463
Eco105I	TACGTA	1 cut(s)	1590
Eco130I	CCWWGG	6 cut(s)	977, 983, 1531, 1823, 2253, 2307
Eco24I	GRGCYC	1 cut(s)	2646
Eco32I	GATATC	1 cut(s)	2058
Eco47I	GGWCC	1 cut(s)	278
Eco57I	CTGAAG	3 cut(s)	791, 1491, 1641
Eco72I	CACGTG	1 cut(s)	2406
EcoRI	GAATTC	1 cut(s)	397
EcoRII	CCWGG	3 cut(s)	327, 1405, 2509
EcoRV	GATATC	1 cut(s)	2058
EcoT14I	CCWWGG	6 cut(s)	977, 983, 1531, 1823, 2253, 2307
EcoT22I	ATGCAT	1 cut(s)	1123
EcoT38I	GRGCYC	1 cut(s)	2646
ErhI	CCWWGG	6 cut(s)	977, 983, 1531, 1823, 2253, 2307
Esp3I	CGTCTC	1 cut(s)	868
FaeI	CATG	9 cut(s)	581, 756, 1121, 1267, 2009, 2120, 2234, 2290, 2311
FalI	AAGNNNNNCTT	4 cut(s)	412, 444, 2451, 2483
FatI	CATG	9 cut(s)	577, 752, 1117, 1263, 2005, 2116, 2230, 2286, 2307
FauNDI	CATATG	1 cut(s)	2502
FbaI	TGATCA	1 cut(s)	1450
FblI	GTMKAC	4 cut(s)	1049, 1648, 1726, 2275
Fnu4HI	GCNGC	6 cut(s)	1351, 1367, 2430, 2515, 2518, 2521
FriOI	GRGCYC	1 cut(s)	2646
Fsp4HI	GCNGC	6 cut(s)	1351, 1367, 2430, 2515, 2518, 2521
FspBI	CTAG	6 cut(s)	27, 1208, 1671, 1956, 2609, 2639
GluI	GCNGC	6 cut(s)	1351, 1367, 2430, 2515, 2518, 2521
GsuI	CTGGAG	3 cut(s)	828, 1050, 1428
HaeIII	GGCC	3 cut(s)	262, 976, 982
HapII	CCGG	2 cut(s)	1089, 1863
HgaI	GACGC	2 cut(s)	977, 1906
Hin1I	GRCGYC	1 cut(s)	988
Hin1II	CATG	9 cut(s)	581, 756, 1121, 1267, 2009, 2120, 2234, 2290, 2311
HincII	GTYRAC	1 cut(s)	157
HindII	GTYRAC	1 cut(s)	157
HpaII	CCGG	2 cut(s)	1089, 1863
Hpy166II	GTNNAC	9 cut(s)	157, 996, 1050, 1114, 1649, 1727, 1790, 2276, 2490
Hpy8I	GTNNAC	9 cut(s)	157, 996, 1050, 1114, 1649, 1727, 1790, 2276, 2490
Hpy99I	CGWCG	3 cut(s)	104, 993, 2396
HpyCH4III	ACNGT	8 cut(s)	161, 1000, 1144, 1595, 1637, 1724, 1731, 1931
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1359, 1555, 2520, 2526
Hsp92I	GRCGYC	1 cut(s)	988
Hsp92II	CATG	9 cut(s)	581, 756, 1121, 1267, 2009, 2120, 2234, 2290, 2311
Ksp22I	TGATCA	1 cut(s)	1450
LguI	GCTCTTC	1 cut(s)	603
LmnI	GCTCC	1 cut(s)	2649
Lsp1109I	GCAGC	6 cut(s)	1337, 1378, 2441, 2526, 2529, 2532
LweI	GCATC	6 cut(s)	184, 231, 358, 1031, 1130, 1831
MabI	ACCWGGT	1 cut(s)	327
MaeI	CTAG	6 cut(s)	27, 1208, 1671, 1956, 2609, 2639
MaeIII	GTNAC	6 cut(s)	624, 755, 1526, 1731, 1987, 2482
MflI	RGATCY	4 cut(s)	50, 358, 803, 1397
MhlI	GDGCHC	2 cut(s)	2411, 2646
MlsI	TGGCCA	1 cut(s)	262
MluCI	AATT	6 cut(s)	31, 212, 397, 568, 2098, 2150
MluNI	TGGCCA	1 cut(s)	262
MlyI	GAGTC	3 cut(s)	83, 125, 2644
MmeI	TCCRAC	2 cut(s)	123, 1062
Mox20I	TGGCCA	1 cut(s)	262
Mph1103I	ATGCAT	1 cut(s)	1123
MscI	TGGCCA	1 cut(s)	262
MseI	TTAA	6 cut(s)	183, 857, 1772, 1944, 2337, 2598
MslI	CAYNNNNRTG	2 cut(s)	582, 1533
Msp20I	TGGCCA	1 cut(s)	262
MspA1I	CMGCKG	1 cut(s)	1369
MspI	CCGG	2 cut(s)	1089, 1863
MspR9I	CCNGG	3 cut(s)	329, 1407, 2511
Mva1269I	GAATGC	2 cut(s)	412, 2168
MvaI	CCWGG	3 cut(s)	329, 1407, 2511
MwoI	GCNNNNNNNGC	4 cut(s)	1359, 1555, 2520, 2526
NcoI	CCATGG	1 cut(s)	2307
NdeI	CATATG	1 cut(s)	2502
NlaIII	CATG	9 cut(s)	581, 756, 1121, 1267, 2009, 2120, 2234, 2290, 2311
NlaIV	GGNNCC	1 cut(s)	2645
NmuCI	GTSAC	5 cut(s)	624, 1526, 1731, 1987, 2482
NsiI	ATGCAT	1 cut(s)	1123
NspI	RCATGY	3 cut(s)	756, 1267, 2290
OliI	CACNNNNGTG	1 cut(s)	1533
PciSI	GCTCTTC	1 cut(s)	603
PcsI	WCGNNNNNNNCGW	1 cut(s)	289
PctI	GAATGC	2 cut(s)	412, 2168
PfeI	GAWTC	9 cut(s)	563, 1010, 1034, 1343, 1574, 1828, 2223, 2576, 2605
PflFI	GACNNNGTC	1 cut(s)	964
PkrI	GCNGC	6 cut(s)	1352, 1368, 2431, 2516, 2519, 2522
PleI	GAGTC	3 cut(s)	82, 124, 2643
PmaCI	CACGTG	1 cut(s)	2406
PmlI	CACGTG	1 cut(s)	2406
PpsI	GAGTC	3 cut(s)	82, 124, 2643
Ppu21I	YACGTR	3 cut(s)	1590, 1787, 2406
PshAI	GACNNNNGTC	2 cut(s)	2179, 2376
PshBI	ATTAAT	1 cut(s)	1944
Psp1406I	AACGTT	1 cut(s)	1233
Psp6I	CCWGG	3 cut(s)	327, 1405, 2509
PspCI	CACGTG	1 cut(s)	2406
PspGI	CCWGG	3 cut(s)	327, 1405, 2509
PspN4I	GGNNCC	1 cut(s)	2645
PspPI	GGNCC	1 cut(s)	278
PsuI	RGATCY	4 cut(s)	50, 358, 803, 1397
PsyI	GACNNNGTC	1 cut(s)	964
RsaI	GTAC	7 cut(s)	997, 1440, 1592, 1617, 1634, 1789, 2491
RsaNI	GTAC	7 cut(s)	996, 1439, 1591, 1616, 1633, 1788, 2490
RseI	CAYNNNNRTG	2 cut(s)	582, 1533
SapI	GCTCTTC	1 cut(s)	603
SaqAI	TTAA	6 cut(s)	183, 857, 1772, 1944, 2337, 2598
SatI	GCNGC	6 cut(s)	1351, 1367, 2430, 2515, 2518, 2521
Sau96I	GGNCC	1 cut(s)	278
SchI	GAGTC	3 cut(s)	83, 125, 2644
ScrFI	CCNGG	3 cut(s)	329, 1407, 2511
SduI	GDGCHC	2 cut(s)	2411, 2646
SexAI	ACCWGGT	1 cut(s)	327
SfaNI	GCATC	6 cut(s)	184, 231, 358, 1031, 1130, 1831
SfcI	CTRYAG	2 cut(s)	1294, 2034
SinI	GGWCC	1 cut(s)	278
SmiMI	CAYNNNNRTG	2 cut(s)	582, 1533
SmlI	CTYRAG	2 cut(s)	131, 1845
SmoI	CTYRAG	2 cut(s)	131, 1845
SnaBI	TACGTA	1 cut(s)	1590
Sse9I	AATT	6 cut(s)	31, 212, 397, 568, 2098, 2150
SsiI	CCGC	6 cut(s)	197, 371, 702, 1267, 1369, 2474
SspI	AATATT	1 cut(s)	1921
SspMI	CTAG	6 cut(s)	27, 1208, 1671, 1956, 2609, 2639
StyD4I	CCNGG	3 cut(s)	327, 1405, 2509
StyI	CCWWGG	6 cut(s)	977, 983, 1531, 1823, 2253, 2307
TaaI	ACNGT	8 cut(s)	161, 1000, 1144, 1595, 1637, 1724, 1731, 1931
TaqI	TCGA	8 cut(s)	292, 363, 1334, 1494, 1973, 2019, 2214, 2391
TasI	AATT	6 cut(s)	31, 212, 397, 568, 2098, 2150
TatI	WGTACW	1 cut(s)	2489
TfiI	GAWTC	9 cut(s)	563, 1010, 1034, 1343, 1574, 1828, 2223, 2576, 2605
Tru1I	TTAA	6 cut(s)	183, 857, 1772, 1944, 2337, 2598
Tru9I	TTAA	6 cut(s)	183, 857, 1772, 1944, 2337, 2598
TscAI	CASTG	3 cut(s)	774, 2461, 2487
TseFI	GTSAC	5 cut(s)	624, 1526, 1731, 1987, 2482
TseI	GCWGC	6 cut(s)	1350, 1366, 2429, 2514, 2517, 2520
Tsp45I	GTSAC	5 cut(s)	624, 1526, 1731, 1987, 2482
TspGWI	ACGGA	1 cut(s)	1535
TspRI	CASTG	3 cut(s)	774, 2461, 2487
Tth111I	GACNNNGTC	1 cut(s)	964
VpaK11BI	GGWCC	1 cut(s)	278
VspI	ATTAAT	1 cut(s)	1944
XapI	RAATTY	4 cut(s)	31, 397, 568, 2150
XbaI	TCTAGA	1 cut(s)	2608
XceI	RCATGY	3 cut(s)	756, 1267, 2290
XmiI	GTMKAC	4 cut(s)	1049, 1648, 1726, 2275
XspI	CTAG	6 cut(s)	27, 1208, 1671, 1956, 2609, 2639
Zsp2I	ATGCAT	1 cut(s)	1123

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.