Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0006287

Physical Location & Seq

Genomic Coordinates Reverse (-)

19767464 .. 19770058

Gene Structure 2595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g17360.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGTAAAGGGAGGGAAGGTTAGTTCCAAGCGAAAAATCAAGACAAGGGTTCCGTCAAAGTATCAGGGTTCCGATGATTCGGATGAGGATTATGTGATTTCGGGTGAAGAAAATGAAGTTTCTGAGGATTTAGAGGAGGATTACTGTTCTTCTTTGGACGGAGATGCGTCGGAAGAGAGCTTTGTGGATGAGGAGGAAGAGGAGGATGAAGTGAAAAAGGTGAGGAAGAAAACTCGATCAAGAGCAAAAAGGGGTGCTGGTGGTTTTATTGTGGATGAGGAGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGATGAAGAGGAAGTGAAACCAGTTAGGAAGGGAATTAGGTCAAAGGTCCAAAATGGTTTTTCTAGCCGGCAGAAAAATGGGGTTAAACCGTCACGAAAGAGGAGAAAGATTACATATCGTGAGGTGGAGGATCAGGATTATAATGATGAAGATGATGATGACGATGAGGAATTCACACCAGATGAAGATGAATTTTCGGACGTGGAAGAAAAACCAGTGGTGAAAAAGAAGAAAACTGATGGGAAAGTGGGCAAGCGGTGCTTGAAGAAAAGGGGTCGTCCTGTAAGAGGTGTAAAAAGGAGAAAATCTTTGGCTTCAAAGAAGCCTTTGAGAAAGAAAGGTAGAACAAGTCAGGCGTCGAGGAGGAAGGCAAGAAGTGACGATGATATTGAAAGTGATAGCGATTTCATGGATAGTATTGTGCCCGTGAGAGTAACGAATGAGAAAAAAACGGTTAGGAAAAGGAGGAGAATGTCTATACCGTCAGATTCAGATTTTGTGTCTTCTGGAGCATCTGATTATGACTACACCATCTCTGAGGAAGAGAGAGAGCAAGTACGAGAAGCCAAGGAGTTGTGTGAAAGATTGGAAACTAATTTGCGAAGTTCATTAGTGCCTACTAGCATTCAGGAGGATACACCTGTACAACAGCCAAGAAACCCTCCTAGAAGGAAGGGTAAAGAGAAGATTGAGCAAGTGAAGGTTGAGGTTGTAAAGCAGGTCTGTGGCATTTGTCTCTCCGAGGAAGATAAAAGAAGAGTGAGGGGAACACTAGACTGTTGCACTCATTATTTTTGTTTTGCCTGCATCATGGAATGGGGAAAAGTGGAATCTCGTTGCCCTTTGTGCAAGCAGAGATTTAAGACAATTAGTAAGCCTGCAAGATGTACGACAGGAATTGATTTGAGAGAAGTGGTGATACAGGTCTCTGAGCGTGATCAGGTCTATCAGCCGACAGAAGAAGAACTCAGGAGTTATCTTGACCCTTATGAGAATGTGATATGTACAGAATGCCACGAAGGAGGGGAAGATGGCCTCATGTTACTGTGTGATCTATGTGATTCACCTGCTCACACCTTTTGTGTTGGTCTTGGCCGAGAAGTACCTGAAGGTAATTGGTACTGTGAGGGTTGTAGACCTGTGGCTATGGGATCCTCAAGTTCACAGGCTCAGGGTCGGTTGTCTGATCAAAGAACTACAAACAACATTTTGTCTAATAGACCATCACCTACTGTACATTTTGACGAAGGAATAGACCTTAATGTGGTGTCCTCACCTCGTCCACAATTTACTCAAGGATTTCCCCCTAGATTTCCTGTTGGAGGTTTTCAAGCACCTTTCCCGGTATCTGGGGCAGGAGCACCAACTCTATCAGGGAGACGCTTAATACAGCGTCATATTCAACAACTCCTTAATTCTAATAGGACGAGTTATATGGCCAGTATAAATGAGAGGAACTCATCTGATAATTTGAGTAATGATTTCTCTCACCCTCAAGCTGCTCAGACGAGGGAAATGACAGTCCAACATACCAGGACAGATGAGATGGAGGCATCTTACCACACATTCTTTGAGGAGAGATTACAAAACAATCATTTAGCACTAGTGCCAGATAACTTGAGTACTGATTTCTTAAATACATCAGCATCAACCCCTCAGAGAAGGCAAGCAATCGGGGATCCGACTACAACATCTGCTGATAGATCTCAAAATGGAGCATTATGGCCTGTACTTACCGGAATGAATTCAGTACCAAATTCCGGACAATTCCATCACTTCAGCTGTAGACCAAATATTAGTGGATCTGATGCTGGTGTGTCCCCTAGTACTGCTACGGAACAGGATGTTTTTCACCTAGCAAAGGAACAACTGAAAGTGATGGTCAAAAAGCACTTGGATAATTTGTCCCGAGACGTTGATCGAGGAATACAAAGACACTTTCAAGGACATTGCGAGGAGATCTACGCACACTGTCTTGGCTGCGTGTGGACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008623 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016590 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019899 GO:0019904 GO:0031010 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070063 GO:0070603 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD zf-RING_2

Protein Analysis

772

Amino Acids

87.46

Weight (kDa)

5.45

Isoelectric Point (pI)

65.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05670 AT3G05670 AT3G05670
fragaria_vesca	FvH4_6g07080
malus_domestica	MD04G1196300.v1.1 MD12G1209300.v1.1
prunus_persica	Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1
pyrus_communis	pycom04g17360 pycom12g19660
rosa_chinensis	RchiOBHm_Chr3g0456661
rosa_laevigata	RLG00000025286
rosa_multiflora	Rmu_co8126688.1_g000001 Rmu_sc0000133.1_g000031
rosa_roxburghii	Rroxscaffold_11G00450420 Rroxscaffold_6G00422560
rosa_rugosa	Rorug03G0014500 Rorug03G0014600 Rorug03G0014700 Rorug03G0014800.1
rosa_samantha	Rh3AG075300 Rh3BG077200 Rh3CG076900 Rh3DG078900
rosa_wichuraiana	Rw3G006450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	462
AarI	CACCTGC	1 cut(s)	1396
Acc36I	ACCTGC	2 cut(s)	1030, 1396
AccI	GTMKAC	2 cut(s)	1456, 2107
AccIII	TCCGGA	1 cut(s)	2081
AciI	CCGC	1 cut(s)	577
AclWI	GGATC	6 cut(s)	459, 1467, 1480, 1994, 2007, 2131
AcoI	YGGCCR	2 cut(s)	1414, 1758
AcsI	RAATTY	4 cut(s)	491, 512, 2065, 2077
AcuI	CTGAAG	2 cut(s)	1449, 2083
AcyI	GRCGYC	1 cut(s)	677
AfiI	CCNNNNNNNGG	6 cut(s)	608, 1585, 1643, 1670, 2081, 2182
AgsI	TTSAA	6 cut(s)	586, 639, 713, 1652, 1724, 2264
AhlI	ACTAGT	1 cut(s)	1924
AjiI	CACGTC	2 cut(s)	523, 2313
AjnI	CCWGG	1 cut(s)	1853
AloI	GAACNNNNNNTCC	2 cut(s)	7, 39
AluBI	AGCT	3 cut(s)	180, 1820, 2103
AluI	AGCT	3 cut(s)	180, 1820, 2103
Alw21I	GWGCWC	1 cut(s)	1684
Alw26I	GTCTC	4 cut(s)	1061, 1252, 1693, 2226
AlwI	GGATC	6 cut(s)	459, 1467, 1480, 1994, 2007, 2131
Ama87I	CYCGRG	1 cut(s)	2229
Aor13HI	TCCGGA	1 cut(s)	2081
AoxI	GGCC	4 cut(s)	1354, 1414, 1758, 2045
ApeKI	GCWGC	2 cut(s)	1820, 2301
ApoI	RAATTY	4 cut(s)	491, 512, 2065, 2077
Asp700I	GAANNNNTTC	1 cut(s)	2065
AspS9I	GGNCC	1 cut(s)	367
AsuC2I	CCSGG	1 cut(s)	1664
AsuHPI	GGTGA	9 cut(s)	116, 232, 553, 1249, 1377, 1539, 1587, 1802, 2165
AvaI	CYCGRG	1 cut(s)	2229
AvaII	GGWCC	1 cut(s)	367
BaeGI	GKGCMC	1 cut(s)	747
BaeI	ACNNNNGTAYC	2 cut(s)	948, 981
BalI	TGGCCA	1 cut(s)	1760
BamHI	GGATCC	2 cut(s)	1472, 1999
BarI	GAAGNNNNNNTAC	2 cut(s)	1224, 1256
BbsI	GAAGAC	1 cut(s)	816
Bbv12I	GWGCWC	1 cut(s)	1684
BbvI	GCAGC	2 cut(s)	1807, 2288
BccI	CCATC	7 cut(s)	554, 860, 1346, 1552, 1861, 2100, 2194
BciT130I	CCWGG	1 cut(s)	1855
BciVI	GTATCC	1 cut(s)	949
BclI	TGATCA	2 cut(s)	1258, 1507
BcnI	CCSGG	1 cut(s)	1664
BcoDI	GTCTC	4 cut(s)	1061, 1252, 1693, 2226
BcuI	ACTAGT	1 cut(s)	1924
BfaI	CTAG	8 cut(s)	384, 942, 987, 1094, 1629, 1925, 2145, 2177
BfmI	CTRYAG	1 cut(s)	2104
BfuAI	ACCTGC	2 cut(s)	1030, 1396
BfuI	GTATCC	1 cut(s)	949
BglII	AGATCT	2 cut(s)	2024, 2280
BisI	GCNGC	2 cut(s)	1821, 2302
BlsI	GCNGC	2 cut(s)	1822, 2303
BmcAI	AGTACT	2 cut(s)	1945, 2149
Bme1390I	CCNGG	2 cut(s)	1664, 1855
Bme18I	GGWCC	1 cut(s)	367
BmeT110I	CYCGRG	1 cut(s)	2229
BmgBI	CACGTC	2 cut(s)	523, 2313
BmgT120I	GGNCC	1 cut(s)	367
BmiI	GGNNCC	4 cut(s)	51, 70, 1474, 2001
BmrFI	CCNGG	2 cut(s)	1664, 1855
BmsI	GCATC	6 cut(s)	154, 842, 1137, 1883, 1976, 2119
BpiI	GAAGAC	1 cut(s)	816
BplI	GAGNNNNNCTC	2 cut(s)	1763, 1795
BpmI	CTGGAG	1 cut(s)	849
Bpu10I	CCTNAGC	1 cut(s)	1491
BpuEI	CTTGAG	4 cut(s)	1462, 1599, 1800, 1960
BpuMI	CCSGG	1 cut(s)	1664
BsaHI	GRCGYC	1 cut(s)	677
BsaI	GGTCTC	1 cut(s)	1252
BsaJI	CCNNGG	2 cut(s)	888, 1062
BsaWI	WCCGGW	2 cut(s)	2057, 2081
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	6 cut(s)	608, 1585, 1643, 1670, 2081, 2182
Bse118I	RCCGGY	1 cut(s)	387
Bse1I	ACTGG	3 cut(s)	341, 536, 1761
Bse3DI	GCAATG	1 cut(s)	2269
BseAI	TCCGGA	1 cut(s)	2081
BseBI	CCWGG	1 cut(s)	1855
BseDI	CCNNGG	2 cut(s)	888, 1062
BseGI	GGATG	6 cut(s)	88, 193, 211, 280, 295, 2170
BseLI	CCNNNNNNNGG	6 cut(s)	608, 1585, 1643, 1670, 2081, 2182
BseMI	GCAATG	1 cut(s)	2269
BseMII	CTCAG	7 cut(s)	114, 849, 1242, 1303, 1505, 1838, 1991
BseNI	ACTGG	3 cut(s)	341, 536, 1761
BseSI	GKGCMC	1 cut(s)	747
BseXI	GCAGC	2 cut(s)	1807, 2288
BshFI	GGCC	4 cut(s)	1356, 1416, 1760, 2047
BsiHKAI	GWGCWC	1 cut(s)	1684
BsiHKCI	CYCGRG	1 cut(s)	2229
BsiSI	CCGG	4 cut(s)	388, 1664, 2058, 2082
BslFI	GGGAC	2 cut(s)	2125, 2212
BslI	CCNNNNNNNGG	6 cut(s)	608, 1585, 1643, 1670, 2081, 2182
BsmAI	GTCTC	4 cut(s)	1061, 1252, 1693, 2226
BsmBI	CGTCTC	2 cut(s)	1693, 2226
BsmFI	GGGAC	2 cut(s)	2125, 2212
BsmI	GAATGC	2 cut(s)	945, 1337
BsnI	GGCC	4 cut(s)	1356, 1416, 1760, 2047
Bso31I	GGTCTC	1 cut(s)	1252
BsoBI	CYCGRG	1 cut(s)	2229
Bsp1286I	GDGCHC	2 cut(s)	747, 1684
Bsp13I	TCCGGA	1 cut(s)	2081
Bsp1407I	TGTACA	3 cut(s)	964, 1325, 1555
BspACI	CCGC	1 cut(s)	577
BspANI	GGCC	4 cut(s)	1356, 1416, 1760, 2047
BspCNI	CTCAG	7 cut(s)	115, 850, 1243, 1302, 1504, 1837, 1990
BspEI	TCCGGA	1 cut(s)	2081
BspLI	GGNNCC	4 cut(s)	51, 70, 1474, 2001
BspMI	ACCTGC	2 cut(s)	1030, 1396
BspPI	GGATC	6 cut(s)	459, 1467, 1480, 1994, 2007, 2131
BspTNI	GGTCTC	1 cut(s)	1252
BsrDI	GCAATG	1 cut(s)	2269
BsrFI	RCCGGY	1 cut(s)	387
BsrGI	TGTACA	3 cut(s)	964, 1325, 1555
BsrI	ACTGG	3 cut(s)	341, 536, 1761
BssAI	RCCGGY	1 cut(s)	387
BssECI	CCNNGG	2 cut(s)	888, 1062
BssNI	GRCGYC	1 cut(s)	677
BssT1I	CCWWGG	1 cut(s)	888
Bst2UI	CCWGG	1 cut(s)	1855
Bst6I	CTCTTC	5 cut(s)	168, 192, 321, 858, 1072
BstACI	GRCGYC	1 cut(s)	677
BstAPI	GCANNNNNTGC	1 cut(s)	579
BstAUI	TGTACA	3 cut(s)	964, 1325, 1555
BstC8I	GCNNGC	6 cut(s)	389, 575, 1126, 1172, 1200, 1989
BstDEI	CTNAG	7 cut(s)	123, 858, 1251, 1289, 1491, 1824, 1977
BstENI	CCTNNNNNAGG	3 cut(s)	606, 1641, 2180
BstF5I	GGATG	6 cut(s)	88, 193, 211, 280, 295, 2170
BstMAI	GTCTC	4 cut(s)	1061, 1252, 1693, 2226
BstMWI	GCNNNNNNNGC	2 cut(s)	579, 1167
BstNI	CCWGG	1 cut(s)	1855
BstSCI	CCNGG	2 cut(s)	1662, 1853
BstSFI	CTRYAG	1 cut(s)	2104
BstSLI	GKGCMC	1 cut(s)	747
BstV1I	GCAGC	2 cut(s)	1807, 2288
BstV2I	GAAGAC	1 cut(s)	816
BstX2I	RGATCY	5 cut(s)	1472, 1999, 2024, 2123, 2280
BstYI	RGATCY	5 cut(s)	1472, 1999, 2024, 2123, 2280
BsuI	GTATCC	1 cut(s)	949
BsuRI	GGCC	4 cut(s)	1356, 1416, 1760, 2047
BtrI	CACGTC	2 cut(s)	523, 2313
BtsCI	GGATG	6 cut(s)	88, 193, 211, 280, 295, 2170
BtsIMutI	CAGTG	2 cut(s)	543, 2290
BveI	ACCTGC	2 cut(s)	1030, 1396
Cac8I	GCNNGC	6 cut(s)	389, 575, 1126, 1172, 1200, 1989
Cfr10I	RCCGGY	1 cut(s)	387
Cfr13I	GGNCC	1 cut(s)	367
CseI	GACGC	4 cut(s)	156, 666, 1703, 1710
CviAII	CATG	3 cut(s)	730, 1132, 1360
DdeI	CTNAG	7 cut(s)	123, 858, 1251, 1289, 1491, 1824, 1977
EaeI	YGGCCR	2 cut(s)	1414, 1758
Eam1104I	CTCTTC	5 cut(s)	168, 192, 321, 858, 1072
EarI	CTCTTC	5 cut(s)	168, 192, 321, 858, 1072
Eco130I	CCWWGG	1 cut(s)	888
Eco31I	GGTCTC	1 cut(s)	1252
Eco47I	GGWCC	1 cut(s)	367
Eco57I	CTGAAG	2 cut(s)	1449, 2083
Eco88I	CYCGRG	1 cut(s)	2229
EcoNI	CCTNNNNNAGG	3 cut(s)	606, 1641, 2180
EcoRI	GAATTC	2 cut(s)	491, 2065
EcoRII	CCWGG	1 cut(s)	1853
EcoT14I	CCWWGG	1 cut(s)	888
ErhI	CCWWGG	1 cut(s)	888
Esp3I	CGTCTC	2 cut(s)	1693, 2226
FaeI	CATG	3 cut(s)	733, 1135, 1363
FalI	AAGNNNNNCTT	2 cut(s)	566, 598
FaqI	GGGAC	2 cut(s)	2125, 2212
FatI	CATG	3 cut(s)	729, 1131, 1359
FbaI	TGATCA	2 cut(s)	1258, 1507
FblI	GTMKAC	2 cut(s)	1456, 2107
Fnu4HI	GCNGC	2 cut(s)	1821, 2302
FokI	GGATG	6 cut(s)	95, 200, 218, 287, 302, 2177
Fsp4HI	GCNGC	2 cut(s)	1821, 2302
FspBI	CTAG	8 cut(s)	384, 942, 987, 1094, 1629, 1925, 2145, 2177
GluI	GCNGC	2 cut(s)	1821, 2302
GsuI	CTGGAG	1 cut(s)	849
HaeIII	GGCC	4 cut(s)	1356, 1416, 1760, 2047
HapII	CCGG	4 cut(s)	388, 1664, 2058, 2082
HgaI	GACGC	4 cut(s)	156, 666, 1703, 1710
Hin1I	GRCGYC	1 cut(s)	677
Hin1II	CATG	3 cut(s)	733, 1135, 1363
HinfI	GANTC	4 cut(s)	77, 809, 1151, 1382
HpaII	CCGG	4 cut(s)	388, 1664, 2058, 2082
HphI	GGTGA	9 cut(s)	116, 232, 553, 1249, 1377, 1539, 1587, 1802, 2165
Hpy166II	GTNNAC	5 cut(s)	1457, 1484, 1604, 2108, 2310
Hpy8I	GTNNAC	5 cut(s)	1457, 1484, 1604, 2108, 2310
Hpy99I	CGWCG	2 cut(s)	172, 682
HpyCH4IV	ACGT	3 cut(s)	522, 2235, 2312
HpyCH4V	TGCA	4 cut(s)	1104, 1128, 1170, 1202
HpyF10VI	GCNNNNNNNGC	2 cut(s)	579, 1167
HpyF3I	CTNAG	7 cut(s)	123, 858, 1251, 1289, 1491, 1824, 1977
HpySE526I	ACGT	3 cut(s)	522, 2235, 2312
Hsp92I	GRCGYC	1 cut(s)	677
Hsp92II	CATG	3 cut(s)	733, 1135, 1363
Kpn2I	TCCGGA	1 cut(s)	2081
KroI	GCCGGC	1 cut(s)	387
KroNI	GCCGGC	1 cut(s)	389
Ksp22I	TGATCA	2 cut(s)	1258, 1507
LmnI	GCTCC	3 cut(s)	830, 1679, 2036
Lsp1109I	GCAGC	2 cut(s)	1807, 2288
LweI	GCATC	6 cut(s)	154, 842, 1137, 1883, 1976, 2119
MaeI	CTAG	8 cut(s)	384, 942, 987, 1094, 1629, 1925, 2145, 2177
MaeII	ACGT	3 cut(s)	522, 2235, 2312
MaeIII	GTNAC	4 cut(s)	411, 698, 754, 1362
MflI	RGATCY	5 cut(s)	1472, 1999, 2024, 2123, 2280
MhlI	GDGCHC	2 cut(s)	747, 1684
MlsI	TGGCCA	1 cut(s)	1760
MluNI	TGGCCA	1 cut(s)	1760
MmeI	TCCRAC	4 cut(s)	150, 1621, 1870, 2027
Mox20I	TGGCCA	1 cut(s)	1760
MroI	TCCGGA	1 cut(s)	2081
MroNI	GCCGGC	1 cut(s)	387
MroXI	GAANNNNTTC	1 cut(s)	2065
MscI	TGGCCA	1 cut(s)	1760
MseI	TTAA	6 cut(s)	405, 1182, 1581, 1706, 1734, 1955
Msp20I	TGGCCA	1 cut(s)	1760
MspA1I	CMGCKG	1 cut(s)	2103
MspI	CCGG	4 cut(s)	388, 1664, 2058, 2082
MspR9I	CCNGG	2 cut(s)	1664, 1855
Mva1269I	GAATGC	2 cut(s)	945, 1337
MvaI	CCWGG	1 cut(s)	1855
MwoI	GCNNNNNNNGC	2 cut(s)	579, 1167
NaeI	GCCGGC	1 cut(s)	389
NciI	CCSGG	1 cut(s)	1664
NgoMIV	GCCGGC	1 cut(s)	387
NlaIII	CATG	3 cut(s)	733, 1135, 1363
NlaIV	GGNNCC	4 cut(s)	51, 70, 1474, 2001
NmeAIII	GCCGAG	1 cut(s)	1442
NmuCI	GTSAC	2 cut(s)	411, 698
PaqCI	CACCTGC	1 cut(s)	1396
PctI	GAATGC	2 cut(s)	945, 1337
PdiI	GCCGGC	1 cut(s)	389
PdmI	GAANNNNTTC	1 cut(s)	2065
PfeI	GAWTC	4 cut(s)	77, 809, 1151, 1382
PkrI	GCNGC	2 cut(s)	1822, 2303
PsiI	TTATAA	1 cut(s)	462
Psp6I	CCWGG	1 cut(s)	1853
PspGI	CCWGG	1 cut(s)	1853
PspN4I	GGNNCC	4 cut(s)	51, 70, 1474, 2001
PspPI	GGNCC	1 cut(s)	367
PsuI	RGATCY	5 cut(s)	1472, 1999, 2024, 2123, 2280
PvuII	CAGCTG	1 cut(s)	2103
SaqAI	TTAA	6 cut(s)	405, 1182, 1581, 1706, 1734, 1955
SatI	GCNGC	2 cut(s)	1821, 2302
Sau96I	GGNCC	1 cut(s)	367
ScaI	AGTACT	2 cut(s)	1945, 2149
ScrFI	CCNGG	2 cut(s)	1664, 1855
SduI	GDGCHC	2 cut(s)	747, 1684
SfaNI	GCATC	6 cut(s)	154, 842, 1137, 1883, 1976, 2119
SfcI	CTRYAG	1 cut(s)	2104
SinI	GGWCC	1 cut(s)	367
SmlI	CTYRAG	4 cut(s)	1477, 1614, 1815, 1939
SmoI	CTYRAG	4 cut(s)	1477, 1614, 1815, 1939
SpeI	ACTAGT	1 cut(s)	1924
SsiI	CCGC	1 cut(s)	577
SspI	AATATT	1 cut(s)	2116
SspMI	CTAG	8 cut(s)	384, 942, 987, 1094, 1629, 1925, 2145, 2177
StyD4I	CCNGG	2 cut(s)	1662, 1853
StyI	CCWWGG	1 cut(s)	888
TaiI	ACGT	3 cut(s)	525, 2238, 2315
TaqI	TCGA	3 cut(s)	235, 680, 2242
TatI	WGTACW	6 cut(s)	964, 1325, 1555, 1943, 2050, 2147
TfiI	GAWTC	4 cut(s)	77, 809, 1151, 1382
Tru1I	TTAA	6 cut(s)	405, 1182, 1581, 1706, 1734, 1955
Tru9I	TTAA	6 cut(s)	405, 1182, 1581, 1706, 1734, 1955
TscAI	CASTG	2 cut(s)	543, 2297
TseFI	GTSAC	2 cut(s)	411, 698
TseI	GCWGC	2 cut(s)	1820, 2301
Tsp45I	GTSAC	2 cut(s)	411, 698
TspDTI	ATGAA	9 cut(s)	129, 222, 339, 483, 519, 525, 718, 918, 2078
TspGWI	ACGGA	3 cut(s)	42, 174, 2171
TspRI	CASTG	2 cut(s)	543, 2297
VpaK11BI	GGWCC	1 cut(s)	367
XagI	CCTNNNNNAGG	3 cut(s)	606, 1641, 2180
XapI	RAATTY	4 cut(s)	491, 512, 2065, 2077
XmiI	GTMKAC	2 cut(s)	1456, 2107
XmnI	GAANNNNTTC	1 cut(s)	2065
XspI	CTAG	8 cut(s)	384, 942, 987, 1094, 1629, 1925, 2145, 2177
ZrmI	AGTACT	2 cut(s)	1945, 2149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.