Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000011

Orthogroup ID

OG0006287

Physical Location & Seq

Genomic Coordinates Reverse (-)

25389 .. 29017

Gene Structure 3629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_11G00450420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGTAAAGGGAGGGAAAGTTAGTTCCAAGCGAAGAGTCAAGCCACGGATTCGGTCTGATTATAAGGGTTCAGATGATTCGGATGAAGATTATGTGATTTCAGATGAAGAAAAGCTAGTTTCTGAGGATTTGGAGGACGATTATTGCTCCTCTTTGGATGGGAATGCATCAGAAGAGAGCTTTGGTAGTTTTGCAGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGTGAGATGGGCGAGAAAGAACAGTAGATCAAGAGCGAAAAAGGGTGTTGGTAGATCAAGAGCAAAAAAGGGTATTGATAGATCTATTGTGGATGAAGAGGAGGAGGATGAGCTGGAGGAGCAGGAGCAGGAGCAGGAGGACGAGGAGGAAGATGATGAGGAAATGAAAAAGTTGAGAAAGTACGGTAGATCAAGAGCGAAAAAGGGTAAAGATATATTTATTGCCTACGAGGAGGAGGATGAGCAGGAGGAGGAAGAAGAAGAAGAGGAAGAGGTGAGGAAGGTGGCTAGATCAAAGTCCCAAAATGGTTTCTCTGGAAGGCAGAAAAATGGGGTTAAACCATCACAAAAGAGGAGAAGGGCTACATATGAAGAAATGGCAGATCAGGATTATGATGATGAAGAAGATGAGGACGACGACTATGATGAGGAATTTACACCCGATGAAGATGATTTTTCAGAATTGGAAGAAGAATCAAGGGTGAAAAAGAAGAAAACTAATGTGAAAGTGGGCAAGCAGCGTTTGAAGAAAAAAGTTCCTATAAGAAGAAAATCAAAGAAGCCTTTGAGAAAGAAACAAAAAAAGAATCGTACATTGAGGAGGAAAGCAAGATCTGATGATGATGATGGTGATTTTATGGACAGTAACCTGCCTGTTAGAGAGAAAAACAAGAACAAAAGGCCAAACAAAAGGAGGAGATTTGTTGCTCCATCCGATTCAGATTTTGTGTCTTCTGGATCATCTGACTGTGATTACACCATTTCTGAGGAAGAGAGAGAGCAAGTGAGGGAAGCCATGCAGTTGTGCGGAAGTTTGGAAAGCTCAATACTGCCTGACAAAATTCAGGAGAATGAGACTGTACAGCTGCCAAGAAAGCCTCCTGGTAGGAAAGGTAAAGAAAAGGTTGAGCAAGTGAAGGTCGAGGTGGTTAAGCAGGTCTGTGGAATTTGTCTCTCTGAGGAAGATAAGAGAAGAGTGAGGGGAACACTAGACTGCTGCACTCATTATTTTTGTTTTTCCTGCATCATGGAATGGGGCAAAGTGGAATCTCGCTGCCCATTATGCAAGCAGAGGTTTAAAGCAATTACTAAACCCACAAGAGCAGGAACTGATTTGAGAGATGTGGTGATAACAGTCCCTGAGCGTGATCAGACAATCACCGGCTGGGCACCAACTCTGTCAGGAAGACGTTTAATGCACCGTCATATTCAGCAATTGATTACTGCTAATAGAAGGAGTTATTTGGCCAGTAGAAATGAGAGGAATTCATCTGCTAATTTGAGTACTGATGTCTTAAATGGTCAAACTGCTCCGGGGAGGGAAACAGTAGTTCAGCATACAAGGACAGACGGAATGGACAGATCTTTTCACACATTCTTTGAGGAGAGATTACAAGAAAACCCCTCACTACAAGTGCAGGATAATGATATCTTTTTGTCAACATCAAGCCATCAGAGAAGGCAAGTAGTCCAGGATCCAACTACAACTTCTGCTGATAGACCTAGCAATGGAACATTATGGCCTGGACTTACAGAGAATACAATATCAGGTCGTCCCCCTCACTTCAGCAGTATATCCGATGGTGGTGTGCCCCCCAATACAGTTATGGGACCAAGTGATTTTCACAGAGCAAAGGAACAACTGCAATCATTGGTCATAAGCCACGTAAAAAACTTATCCCGAGATAGGGATTTAGGCCAAAGTAGTACTACTTTCCAGGAGATCGCAAGGAGTGCTATGCACACCGTCCTAGCTGCATGTGAACTGGAGCACACAGGCAGTGAGTTCGTTGAGGACGTGGTAAAGAGGGTCATGGAATACAAACTACCGCCGTGGTTGAGATTGGCTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008623 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016590 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019899 GO:0019904 GO:0031010 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070063 GO:0070603 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD zf-RING_2

Protein Analysis

693

Amino Acids

79.88

Weight (kDa)

5.4

Isoelectric Point (pI)

75.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	389 - 432	6.6e-07	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05670 AT3G05670 AT3G05670
fragaria_vesca	FvH4_6g07080
malus_domestica	MD04G1196300.v1.1 MD12G1209300.v1.1
prunus_persica	Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1
pyrus_communis	pycom04g17360 pycom12g19660
rosa_chinensis	RchiOBHm_Chr3g0456661
rosa_laevigata	RLG00000025286
rosa_multiflora	Rmu_co8126688.1_g000001 Rmu_sc0000133.1_g000031
rosa_roxburghii	Rroxscaffold_11G00450420 Rroxscaffold_6G00422560
rosa_rugosa	Rorug03G0014500 Rorug03G0014600 Rorug03G0014700 Rorug03G0014800.1
rosa_samantha	Rh3AG075300 Rh3BG077200 Rh3CG076900 Rh3DG078900
rosa_wichuraiana	Rw3G006450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	63
Acc36I	ACCTGC	2 cut(s)	885, 1153
AccB1I	GGYRCC	1 cut(s)	1396
AciI	CCGC	2 cut(s)	1035, 2057
AclWI	GGATC	3 cut(s)	973, 1697, 1710
AcoI	YGGCCR	1 cut(s)	1473
AcsI	RAATTY	4 cut(s)	659, 1068, 1173, 1492
AcuI	CTGAAG	1 cut(s)	1777
AfaI	GTAC	5 cut(s)	410, 820, 1089, 1513, 1936
AfiI	CCNNNNNNNGG	3 cut(s)	1736, 1914, 1915
AgsI	TTSAA	1 cut(s)	754
AjiI	CACGTC	1 cut(s)	2026
AjnI	CCWGG	4 cut(s)	1108, 1698, 1750, 1944
AjuI	GAANNNNNNNTTGG	4 cut(s)	165, 197, 1699, 1731
AloI	GAACNNNNNNTCC	2 cut(s)	7, 39
AluBI	AGCT	6 cut(s)	115, 180, 340, 1050, 1093, 1982
AluI	AGCT	6 cut(s)	115, 180, 340, 1050, 1093, 1982
Alw21I	GWGCWC	1 cut(s)	2001
Alw26I	GTCTC	2 cut(s)	1076, 1184
AlwI	GGATC	3 cut(s)	973, 1697, 1710
AlwNI	CAGNNNCTG	2 cut(s)	1337, 1367
Ama87I	CYCGRG	1 cut(s)	1908
AoxI	GGCC	4 cut(s)	908, 1473, 1748, 1924
ApeKI	GCWGC	5 cut(s)	745, 1093, 1224, 1281, 1982
ApoI	RAATTY	4 cut(s)	659, 1068, 1173, 1492
AspS9I	GGNCC	1 cut(s)	1838
AsuC2I	CCSGG	1 cut(s)	1542
AsuHPI	GGTGA	5 cut(s)	514, 721, 869, 1366, 1378
AvaI	CYCGRG	1 cut(s)	1908
AvaII	GGWCC	1 cut(s)	1838
BaeGI	GKGCMC	2 cut(s)	1399, 1821
BalI	TGGCCA	1 cut(s)	1475
BamHI	GGATCC	1 cut(s)	1702
BanI	GGYRCC	1 cut(s)	1396
BbsI	GAAGAC	2 cut(s)	951, 1420
Bbv12I	GWGCWC	1 cut(s)	2001
BbvI	GCAGC	5 cut(s)	757, 1080, 1211, 1268, 1969
BccI	CCATC	7 cut(s)	152, 228, 577, 848, 946, 1686, 1802
BceAI	ACGGC	1 cut(s)	2044
BcgI	CGANNNNNNTGC	2 cut(s)	1996, 2030
BciT130I	CCWGG	4 cut(s)	1110, 1700, 1752, 1946
BclI	TGATCA	1 cut(s)	1375
BcnI	CCSGG	1 cut(s)	1542
BcoDI	GTCTC	2 cut(s)	1076, 1184
BfaI	CTAG	5 cut(s)	116, 516, 1217, 1731, 1979
BfuAI	ACCTGC	2 cut(s)	885, 1153
BglII	AGATCT	3 cut(s)	308, 839, 1589
BisI	GCNGC	5 cut(s)	746, 1094, 1225, 1282, 1983
BlsI	GCNGC	5 cut(s)	747, 1095, 1226, 1283, 1984
BmcAI	AGTACT	2 cut(s)	1513, 1936
Bme1390I	CCNGG	5 cut(s)	1110, 1542, 1700, 1752, 1946
Bme18I	GGWCC	1 cut(s)	1838
BmeT110I	CYCGRG	1 cut(s)	1908
BmgBI	CACGTC	1 cut(s)	2026
BmgT120I	GGNCC	1 cut(s)	1838
BmiI	GGNNCC	3 cut(s)	1398, 1704, 1839
BmrFI	CCNGG	5 cut(s)	1110, 1542, 1700, 1752, 1946
BmsI	GCATC	2 cut(s)	176, 1260
BpiI	GAAGAC	2 cut(s)	951, 1420
BplI	GAGNNNNNCTC	1 cut(s)	2059
BpmI	CTGGAG	2 cut(s)	362, 2015
Bpu10I	CCTNAGC	1 cut(s)	1368
BpuMI	CCSGG	1 cut(s)	1542
BsaAI	YACGTR	1 cut(s)	1894
BsaJI	CCNNGG	3 cut(s)	44, 1541, 2060
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	3 cut(s)	1736, 1914, 1915
Bse118I	RCCGGY	1 cut(s)	1388
Bse1I	ACTGG	2 cut(s)	1476, 1998
Bse3DI	GCAATG	1 cut(s)	1741
BseBI	CCWGG	4 cut(s)	1110, 1700, 1752, 1946
BseDI	CCNNGG	3 cut(s)	44, 1541, 2060
BseGI	GGATG	6 cut(s)	88, 163, 325, 340, 472, 938
BseLI	CCNNNNNNNGG	3 cut(s)	1736, 1914, 1915
BseMI	GCAATG	1 cut(s)	1741
BseMII	CTCAG	4 cut(s)	114, 984, 1176, 1359
BseNI	ACTGG	2 cut(s)	1476, 1998
BseSI	GKGCMC	2 cut(s)	1399, 1821
BseXI	GCAGC	5 cut(s)	757, 1080, 1211, 1268, 1969
BseYI	CCCAGC	1 cut(s)	1392
BsgI	GTGCAG	2 cut(s)	1210, 1664
BshFI	GGCC	4 cut(s)	910, 1475, 1750, 1926
BshNI	GGYRCC	1 cut(s)	1396
BsiHKAI	GWGCWC	1 cut(s)	2001
BsiHKCI	CYCGRG	1 cut(s)	1908
BsiSI	CCGG	2 cut(s)	1389, 1541
BslFI	GGGAC	4 cut(s)	511, 1349, 1767, 1851
BslI	CCNNNNNNNGG	3 cut(s)	1736, 1914, 1915
BsmAI	GTCTC	2 cut(s)	1076, 1184
BsmFI	GGGAC	4 cut(s)	511, 1349, 1767, 1851
BsmI	GAATGC	1 cut(s)	169
BsnI	GGCC	4 cut(s)	910, 1475, 1750, 1926
BsoBI	CYCGRG	1 cut(s)	1908
Bsp1286I	GDGCHC	3 cut(s)	1399, 1821, 2001
Bsp1407I	TGTACA	1 cut(s)	1087
BspACI	CCGC	2 cut(s)	1035, 2057
BspANI	GGCC	4 cut(s)	910, 1475, 1750, 1926
BspCNI	CTCAG	4 cut(s)	115, 985, 1177, 1360
BspLI	GGNNCC	3 cut(s)	1398, 1704, 1839
BspMI	ACCTGC	2 cut(s)	885, 1153
BspPI	GGATC	3 cut(s)	973, 1697, 1710
BspT107I	GGYRCC	1 cut(s)	1396
BsrDI	GCAATG	1 cut(s)	1741
BsrFI	RCCGGY	1 cut(s)	1388
BsrGI	TGTACA	1 cut(s)	1087
BsrI	ACTGG	2 cut(s)	1476, 1998
BssAI	RCCGGY	1 cut(s)	1388
BssECI	CCNNGG	3 cut(s)	44, 1541, 2060
Bst2UI	CCWGG	4 cut(s)	1110, 1700, 1752, 1946
BstAPI	GCANNNNNTGC	1 cut(s)	1961
BstAUI	TGTACA	1 cut(s)	1087
BstBAI	YACGTR	1 cut(s)	1894
BstC8I	GCNNGC	2 cut(s)	743, 1295
BstDEI	CTNAG	4 cut(s)	123, 993, 1185, 1368
BstDSI	CCRYGG	2 cut(s)	44, 2060
BstF5I	GGATG	6 cut(s)	88, 163, 325, 340, 472, 938
BstMAI	GTCTC	2 cut(s)	1076, 1184
BstMWI	GCNNNNNNNGC	4 cut(s)	346, 1102, 1290, 1961
BstNI	CCWGG	4 cut(s)	1110, 1700, 1752, 1946
BstNSI	RCATGY	1 cut(s)	1989
BstSCI	CCNGG	5 cut(s)	1108, 1540, 1698, 1750, 1944
BstSLI	GKGCMC	2 cut(s)	1399, 1821
BstV1I	GCAGC	5 cut(s)	757, 1080, 1211, 1268, 1969
BstV2I	GAAGAC	2 cut(s)	951, 1420
BstX2I	RGATCY	4 cut(s)	308, 839, 1589, 1702
BstYI	RGATCY	4 cut(s)	308, 839, 1589, 1702
BsuRI	GGCC	4 cut(s)	910, 1475, 1750, 1926
BtgI	CCRYGG	2 cut(s)	44, 2060
BtrI	CACGTC	1 cut(s)	2026
BtsCI	GGATG	6 cut(s)	88, 163, 325, 340, 472, 938
BtsI	GCAGTG	1 cut(s)	2014
BtsIMutI	CAGTG	1 cut(s)	2014
BveI	ACCTGC	2 cut(s)	885, 1153
Cac8I	GCNNGC	2 cut(s)	743, 1295
CaiI	CAGNNNCTG	2 cut(s)	1337, 1367
Cfr10I	RCCGGY	1 cut(s)	1388
Cfr13I	GGNCC	1 cut(s)	1838
Csp6I	GTAC	5 cut(s)	409, 819, 1088, 1512, 1935
CviAII	CATG	4 cut(s)	1024, 1255, 1986, 2041
CviQI	GTAC	5 cut(s)	409, 819, 1088, 1512, 1935
DdeI	CTNAG	4 cut(s)	123, 993, 1185, 1368
DraI	TTTAAA	1 cut(s)	1306
EaeI	YGGCCR	1 cut(s)	1473
Eco32I	GATATC	1 cut(s)	1657
Eco47I	GGWCC	1 cut(s)	1838
Eco57I	CTGAAG	1 cut(s)	1777
Eco88I	CYCGRG	1 cut(s)	1908
EcoRI	GAATTC	1 cut(s)	1492
EcoRII	CCWGG	4 cut(s)	1108, 1698, 1750, 1944
EcoRV	GATATC	1 cut(s)	1657
EcoT22I	ATGCAT	1 cut(s)	169
FaeI	CATG	4 cut(s)	1027, 1258, 1989, 2044
FaqI	GGGAC	4 cut(s)	511, 1349, 1767, 1851
FatI	CATG	4 cut(s)	1023, 1254, 1985, 2040
FauNDI	CATATG	1 cut(s)	595
FbaI	TGATCA	1 cut(s)	1375
Fnu4HI	GCNGC	5 cut(s)	746, 1094, 1225, 1282, 1983
FokI	GGATG	6 cut(s)	95, 170, 332, 347, 479, 925
Fsp4HI	GCNGC	5 cut(s)	746, 1094, 1225, 1282, 1983
FspBI	CTAG	5 cut(s)	116, 516, 1217, 1731, 1979
GluI	GCNGC	5 cut(s)	746, 1094, 1225, 1282, 1983
GsaI	CCCAGC	1 cut(s)	1396
GsuI	CTGGAG	2 cut(s)	362, 2015
HaeIII	GGCC	4 cut(s)	910, 1475, 1750, 1926
HapII	CCGG	2 cut(s)	1389, 1541
Hin1II	CATG	4 cut(s)	1027, 1258, 1989, 2044
HincII	GTYRAC	1 cut(s)	1668
HindII	GTYRAC	1 cut(s)	1668
HinfI	GANTC	7 cut(s)	36, 49, 77, 701, 814, 944, 1274
HpaII	CCGG	2 cut(s)	1389, 1541
HphI	GGTGA	5 cut(s)	514, 721, 869, 1366, 1378
Hpy166II	GTNNAC	2 cut(s)	1668, 1991
Hpy188III	TCNNGA	9 cut(s)	258, 285, 420, 543, 614, 963, 1073, 1410, 1908
Hpy8I	GTNNAC	2 cut(s)	1668, 1991
Hpy99I	CGWCG	1 cut(s)	647
HpyAV	CCTTC	6 cut(s)	502, 540, 579, 1138, 1455, 1680
HpyCH4IV	ACGT	3 cut(s)	1417, 1893, 2025
HpyF10VI	GCNNNNNNNGC	4 cut(s)	346, 1102, 1290, 1961
HpyF3I	CTNAG	4 cut(s)	123, 993, 1185, 1368
HpySE526I	ACGT	3 cut(s)	1417, 1893, 2025
Hsp92II	CATG	4 cut(s)	1027, 1258, 1989, 2044
Ksp22I	TGATCA	1 cut(s)	1375
LmnI	GCTCC	7 cut(s)	152, 346, 352, 358, 940, 1543, 1996
Lsp1109I	GCAGC	5 cut(s)	757, 1080, 1211, 1268, 1969
LweI	GCATC	2 cut(s)	176, 1260
MaeI	CTAG	5 cut(s)	116, 516, 1217, 1731, 1979
MaeII	ACGT	3 cut(s)	1417, 1893, 2025
MaeIII	GTNAC	1 cut(s)	872
MfeI	CAATTG	1 cut(s)	1442
MflI	RGATCY	4 cut(s)	308, 839, 1589, 1702
MhlI	GDGCHC	3 cut(s)	1399, 1821, 2001
MlsI	TGGCCA	1 cut(s)	1475
MluCI	AATT	8 cut(s)	659, 689, 1068, 1173, 1311, 1442, 1492, 1504
MluNI	TGGCCA	1 cut(s)	1475
MlyI	GAGTC	1 cut(s)	45
MmeI	TCCRAC	1 cut(s)	1730
Mox20I	TGGCCA	1 cut(s)	1475
Mph1103I	ATGCAT	1 cut(s)	169
MscI	TGGCCA	1 cut(s)	1475
MseI	TTAA	5 cut(s)	564, 1158, 1305, 1421, 1523
Msp20I	TGGCCA	1 cut(s)	1475
MspA1I	CMGCKG	1 cut(s)	1093
MspI	CCGG	2 cut(s)	1389, 1541
MspR9I	CCNGG	5 cut(s)	1110, 1542, 1700, 1752, 1946
MunI	CAATTG	1 cut(s)	1442
Mva1269I	GAATGC	1 cut(s)	169
MvaI	CCWGG	4 cut(s)	1110, 1700, 1752, 1946
MwoI	GCNNNNNNNGC	4 cut(s)	346, 1102, 1290, 1961
NciI	CCSGG	1 cut(s)	1542
NdeI	CATATG	1 cut(s)	595
NlaIII	CATG	4 cut(s)	1027, 1258, 1989, 2044
NlaIV	GGNNCC	3 cut(s)	1398, 1704, 1839
NsiI	ATGCAT	1 cut(s)	169
NspI	RCATGY	1 cut(s)	1989
PcsI	WCGNNNNNNNCGW	1 cut(s)	2022
PctI	GAATGC	1 cut(s)	169
PfeI	GAWTC	6 cut(s)	49, 77, 701, 814, 944, 1274
PfoI	TCCNGGA	2 cut(s)	1698, 1944
PkrI	GCNGC	5 cut(s)	747, 1095, 1226, 1283, 1984
PleI	GAGTC	1 cut(s)	44
PpsI	GAGTC	1 cut(s)	44
Ppu21I	YACGTR	1 cut(s)	1894
PsiI	TTATAA	1 cut(s)	63
Psp6I	CCWGG	4 cut(s)	1108, 1698, 1750, 1944
PspFI	CCCAGC	1 cut(s)	1392
PspGI	CCWGG	4 cut(s)	1108, 1698, 1750, 1944
PspN4I	GGNNCC	3 cut(s)	1398, 1704, 1839
PspPI	GGNCC	1 cut(s)	1838
PstNI	CAGNNNCTG	2 cut(s)	1337, 1367
PsuI	RGATCY	4 cut(s)	308, 839, 1589, 1702
PvuII	CAGCTG	1 cut(s)	1093
RsaI	GTAC	5 cut(s)	410, 820, 1089, 1513, 1936
RsaNI	GTAC	5 cut(s)	409, 819, 1088, 1512, 1935
SaqAI	TTAA	5 cut(s)	564, 1158, 1305, 1421, 1523
SatI	GCNGC	5 cut(s)	746, 1094, 1225, 1282, 1983
Sau96I	GGNCC	1 cut(s)	1838
ScaI	AGTACT	2 cut(s)	1513, 1936
SchI	GAGTC	1 cut(s)	45
ScrFI	CCNGG	5 cut(s)	1110, 1542, 1700, 1752, 1946
SduI	GDGCHC	3 cut(s)	1399, 1821, 2001
SfaNI	GCATC	2 cut(s)	176, 1260
SinI	GGWCC	1 cut(s)	1838
Sse9I	AATT	8 cut(s)	659, 689, 1068, 1173, 1311, 1442, 1492, 1504
SsiI	CCGC	2 cut(s)	1035, 2057
SspMI	CTAG	5 cut(s)	116, 516, 1217, 1731, 1979
StyD4I	CCNGG	5 cut(s)	1108, 1540, 1698, 1750, 1944
TaiI	ACGT	3 cut(s)	1420, 1896, 2028
TaqI	TCGA	1 cut(s)	1149
TaqII	GACCGA	1 cut(s)	42
TasI	AATT	8 cut(s)	659, 689, 1068, 1173, 1311, 1442, 1492, 1504
TatI	WGTACW	3 cut(s)	1087, 1511, 1934
TfiI	GAWTC	6 cut(s)	49, 77, 701, 814, 944, 1274
Tru1I	TTAA	5 cut(s)	564, 1158, 1305, 1421, 1523
Tru9I	TTAA	5 cut(s)	564, 1158, 1305, 1421, 1523
TscAI	CASTG	1 cut(s)	2014
TseI	GCWGC	5 cut(s)	745, 1093, 1224, 1281, 1982
TspDTI	ATGAA	8 cut(s)	99, 120, 336, 407, 612, 642, 687, 1485
TspGWI	ACGGA	2 cut(s)	61, 1593
TspRI	CASTG	1 cut(s)	2014
VpaK11BI	GGWCC	1 cut(s)	1838
XapI	RAATTY	4 cut(s)	659, 1068, 1173, 1492
XceI	RCATGY	1 cut(s)	1989
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1831
XspI	CTAG	5 cut(s)	116, 516, 1217, 1731, 1979
ZrmI	AGTACT	2 cut(s)	1513, 1936
Zsp2I	ATGCAT	1 cut(s)	169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.