Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006287

Physical Location & Seq

Genomic Coordinates Forward (+)

4270876 .. 4274980

Gene Structure 4105 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g07080.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGGTAAAGGGAGGGAAGGTTAGTTCCAAGCGAAGAGTCAAACCACGGATTCGGTCAGATTATAAGGGTTCCGATGATTCAGATGAAGATTATGTAGTTTCAGATGAAGAAAAGCTAGTTTCTGAGGACTTGGAAGAGGATTATTGCTCCTCTTTGGATGCATCAGATGATGAAGAGGAAGAGGAAGTGGAAGTGAGATGGGCGAGAAAGAACAGTAGATCAAGAGGGAAAAAAGGTGTTGATAGATTTATTGAGGAGGGGGAAGAGGAGGAAGATGAAGAGGAACTGGAAAAGGTGAGAAAGAATGGTAGATCAAGAGCCAAAAAGGGTACTGATAGATTTATTGCTGATGAAGAGGAGGAGGATGAGCTGGAGGAGCTTGAGGAGGAGGAGGATGAAGAGGAAATGAAAAAGGTGAAAAAGAATGGTAGGTCAAGAGCGAGAAAGGGTAAAGATAGATATATTGTGGACGAGGAGGAGGATGAGCTGGAGGAGTTGGAGAAGGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAGGAAGAGGCAATGAAAGAGGTGAGAAAGGTGGCTAGATCAAAGTCCCAAAATGGTTTATCTGGTAGGCAGAAAAATGGGGTTAAACCATCACAAAAAAGGAGGACTAAGTCTGAAGAAATGGCAGATCAGGATTATGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGATGATGAGTACGACGAGGAATTTACACCTGATGAAGATGATTATTCAGAATTGGAAGAAGCATCAAGGGTGAAAAAGAGGAAAACTAATTTGAAAGTGAGCAAGCGGCGTTTGAAGAAAAAAGGTCCTATAAGAAGGAAATCAAAGAAGCCTTCAAGAAAGAAACAAAAAAAGACTCGTACATTGAGGAGGAAAGTAAGATCTGATGACGATGATGGTGATTTTATGGACAGTAACCTTCCTGTTAGAGAAAAGAATGGGAAAAAAAGACCAAAGAAAAGGAGGAGATATGTTGCTCAATCAGATTCAGATTTTGTGTCTGCTGGATCATCCGACTGTGATTACACAATCTCTGAGGAAGAGAGAGAGCAAGTCAGGGAAGCCATGCAGTTGTGTGGAAGTATAGAACCTAATTTGAGAAGTTCATTACAGTCTGACAAAATTCAGGAGATTGAGATTGTACAGCCGCCAAGAAAGCCTCCTGGTAGGAAAGGTAAAGAAAAGATTGAGCAAGTGAAGGTCGAGGTGGTTAAGCAGGTCTGTGGAATTTGTCTCTCTGAGGAAGATAAGAGAAGAGTGAGGGGAACACTAGACTGCTGCACTCACTATTTTTGTTTCTCCTGCATCATGGAATGGGGCAAAGTGGAATCTCGCTGCCCATTATGCAAGCAGAGGTTCAAAACAATTAGTAAACCCACAAGAGCAGGAACTGATTTGAGAGACGTGTGTGTAACAGTCCCTGAGCGTGATCAGGTTTATCAGCCGACAGAAGAAGAACTGAGAAGTTATCTCGATCCTTATGAGAATGTGATTTGTACAGAATGTCATGAAGGTGGAGATGACGGGCTCATGCTACTGTGTGATCTGTGTGATTCACCTGCTCACACCTATTGTGTTGGTCTTGGGCAGGAAGTACCCGAAGGTAATTGGTACTGTGATGGTTGTAGACCTGTTGCTCTGGGATCCTCGAGTTCCCAGGTTCAAGGTTGGTTCACTGAGCAGAGAACAACAAACAACATCTTGCCTAATAGACACTCACCTGCTGTAAGTTTCGGTGAAGGTTTAGAGATAGACCTTAATTCACTGTCCTCTCCTCGTTCCTATATTACTCAAGGATATGGGACTTCTTCTTCCCCTTGGTATCATGTTGGAGGTTTTCAAGCAGCTTCCCCGGGATCTGGGGCAGGGGCACCAACACTGTCAGGAAGACGTTTAATGCACCGTCATATTCAACAATTGATTTCTGCTAATAGAATGAATTATCTGGCCAGTAGAAATGAGAGGAATTCACCTGCTAATTTGAGTACTGATACCTTGAATGCTCAAACTGCTCAGGGGAGGGAAACAATAGTTCAGCATGCAAGGGCAGACGGAACGGGCAGATCTTTTCACACATTCTTTGAGGAGAGATTACAAGAAAATCCCTCACTACAAGTGCAGGACAATGATGTATTTTCGTCAACATCAAGCCATCACAGAAGGCAAGTAGTCCAGGATCCAACTACAACTTCTGCTGATAGACCTAGCAATGGAGCATTATGGCCTGGACTTACAGAGAATACAATATCAGGTCATATCCAAACTCATCAATTCAGCAGTAGGCCAAATATTGGTTTCGATGGAGATTTGTCCCCCAATGCAGTTACGGGACCGAGTGATATTCACAGAGGAAAGGAACAACTGCAAACATTGGTCATAAGCTACATAAAAGACTTGTCCCGAGAGAAGGATTTAGGCCAAAGTACTACTGCTTTCCAGGAGATCGCAAGGAGTGCTATGCAGACCGTCCTAGCTGCATGCGAGCTGGAGCACCTCAGCAATGACGTAATCCCTGTGCAGCCTCCATCACCCTGTTCTCATATTGAATTGATGGCAGGAAAGACAAGTCTGATAAAAGGTTGCTGTTCATCATGTTTTGCACAATTTGTCAAGGACGTCGTAAAATTGGTCATGGAACATAAACAAGCATCATGGTTGACATTAGGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008623 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016590 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019899 GO:0019904 GO:0031010 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070063 GO:0070603 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD zf-RING_2

Protein Analysis

900

Amino Acids

102.08

Weight (kDa)

5.1

Isoelectric Point (pI)

72.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	416 - 459	9e-07	Ring finger domain
PHD	PF00628	508 - 551	9.5e-08	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05670 AT3G05670 AT3G05670
fragaria_vesca	FvH4_6g07080
malus_domestica	MD04G1196300.v1.1 MD12G1209300.v1.1
prunus_persica	Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1
pyrus_communis	pycom04g17360 pycom12g19660
rosa_chinensis	RchiOBHm_Chr3g0456661
rosa_laevigata	RLG00000025286
rosa_multiflora	Rmu_co8126688.1_g000001 Rmu_sc0000133.1_g000031
rosa_roxburghii	Rroxscaffold_11G00450420 Rroxscaffold_6G00422560
rosa_rugosa	Rorug03G0014500 Rorug03G0014600 Rorug03G0014700 Rorug03G0014800.1
rosa_samantha	Rh3AG075300 Rh3BG077200 Rh3CG076900 Rh3DG078900
rosa_wichuraiana	Rw3G006450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	63
AarI	CACCTGC	3 cut(s)	1594, 1756, 2008
AatII	GACGTC	1 cut(s)	2646
Acc36I	ACCTGC	4 cut(s)	1234, 1594, 1756, 2008
AccB1I	GGYRCC	1 cut(s)	1897
AccB7I	CCANNNNNTGG	1 cut(s)	2318
AccI	GTMKAC	1 cut(s)	1654
AciI	CCGC	2 cut(s)	814, 1175
AclWI	GGATC	7 cut(s)	1042, 1496, 1665, 1678, 1891, 2198, 2211
AcoI	YGGCCR	1 cut(s)	1974
AcsI	RAATTY	4 cut(s)	728, 1149, 1254, 1993
AcuI	CTGAAG	1 cut(s)	669
AcyI	GRCGYC	1 cut(s)	2643
AfaI	GTAC	9 cut(s)	331, 719, 889, 1170, 1525, 1623, 1640, 2014, 2452
AfiI	CCNNNNNNNGG	4 cut(s)	1886, 2237, 2318, 2434
AflIII	ACRYGT	1 cut(s)	1431
AgsI	TTSAA	9 cut(s)	802, 823, 864, 1387, 1691, 1868, 1940, 2026, 2573
AjiI	CACGTC	1 cut(s)	1432
AjnI	CCWGG	5 cut(s)	1189, 1683, 2199, 2251, 2463
AjuI	GAANNNNNNNTTGG	2 cut(s)	2200, 2232
AloI	GAACNNNNNNTCC	2 cut(s)	7, 39
AluBI	AGCT	8 cut(s)	115, 370, 379, 487, 1874, 2409, 2501, 2512
AluI	AGCT	8 cut(s)	115, 370, 379, 487, 1874, 2409, 2501, 2512
Alw21I	GWGCWC	1 cut(s)	2520
Alw26I	GTCTC	2 cut(s)	1265, 1422
AlwI	GGATC	7 cut(s)	1042, 1496, 1665, 1678, 1891, 2198, 2211
AlwNI	CAGNNNCTG	2 cut(s)	1418, 1448
Ama87I	CYCGRG	3 cut(s)	1675, 1879, 2427
AoxI	GGCC	4 cut(s)	1974, 2249, 2309, 2443
ApeKI	GCWGC	5 cut(s)	1305, 1362, 1871, 2501, 2545
ApoI	RAATTY	4 cut(s)	728, 1149, 1254, 1993
ArsI	GACNNNNNNTTYG	1 cut(s)	2677
AspS9I	GGNCC	2 cut(s)	833, 2357
AsuC2I	CCSGG	2 cut(s)	1880, 1881
AvaI	CYCGRG	3 cut(s)	1675, 1879, 2427
AvaII	GGWCC	2 cut(s)	833, 2357
BaeGI	GKGCMC	1 cut(s)	1900
BalI	TGGCCA	1 cut(s)	1976
BamHI	GGATCC	2 cut(s)	1670, 2203
BanI	GGYRCC	1 cut(s)	1897
BanII	GRGCYC	1 cut(s)	1557
BbsI	GAAGAC	1 cut(s)	1921
Bbv12I	GWGCWC	1 cut(s)	2520
BbvCI	CCTCAGC	1 cut(s)	2522
BbvI	GCAGC	5 cut(s)	1292, 1349, 1883, 2488, 2557
BccI	CCATC	8 cut(s)	192, 631, 917, 1640, 2187, 2321, 2560, 2572
BciT130I	CCWGG	5 cut(s)	1191, 1685, 2201, 2253, 2465
BclI	TGATCA	1 cut(s)	1456
BcnI	CCSGG	2 cut(s)	1880, 1881
BcoDI	GTCTC	2 cut(s)	1265, 1422
BfaI	CTAG	5 cut(s)	116, 570, 1298, 2232, 2498
BfuAI	ACCTGC	4 cut(s)	1234, 1594, 1756, 2008
BglII	AGATCT	2 cut(s)	908, 2090
BisI	GCNGC	7 cut(s)	815, 1175, 1306, 1363, 1872, 2502, 2546
BlsI	GCNGC	7 cut(s)	816, 1176, 1307, 1364, 1873, 2503, 2547
BmcAI	AGTACT	2 cut(s)	2014, 2452
Bme1390I	CCNGG	7 cut(s)	1191, 1685, 1880, 1881, 2201, 2253, 2465
Bme18I	GGWCC	2 cut(s)	833, 2357
BmeT110I	CYCGRG	3 cut(s)	1675, 1879, 2427
BmgBI	CACGTC	1 cut(s)	1432
BmgT120I	GGNCC	2 cut(s)	833, 2357
BmiI	GGNNCC	5 cut(s)	70, 1672, 1899, 2205, 2358
BmrFI	CCNGG	7 cut(s)	1191, 1685, 1880, 1881, 2201, 2253, 2465
BmsI	GCATC	5 cut(s)	148, 170, 779, 1341, 2684
BpiI	GAAGAC	1 cut(s)	1921
BpmI	CTGGAG	3 cut(s)	392, 509, 2534
Bpu10I	CCTNAGC	3 cut(s)	1449, 2040, 2522
BpuEI	CTTGAG	2 cut(s)	401, 1803
BpuMI	CCSGG	2 cut(s)	1880, 1881
BsaHI	GRCGYC	1 cut(s)	2643
BsaJI	CCNNGG	5 cut(s)	44, 1683, 1844, 1878, 1879
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	4 cut(s)	1886, 2237, 2318, 2434
Bse1I	ACTGG	2 cut(s)	291, 1977
Bse3DI	GCAATG	3 cut(s)	552, 2242, 2533
BseBI	CCWGG	5 cut(s)	1191, 1685, 2201, 2253, 2465
BseDI	CCNNGG	5 cut(s)	44, 1683, 1844, 1878, 1879
BseGI	GGATG	5 cut(s)	163, 370, 400, 487, 1037
BseLI	CCNNNNNNNGG	4 cut(s)	1886, 2237, 2318, 2434
BseMI	GCAATG	3 cut(s)	552, 2242, 2533
BseMII	CTCAG	8 cut(s)	114, 1053, 1257, 1440, 1478, 1695, 2054, 2536
BseNI	ACTGG	2 cut(s)	291, 1977
BseSI	GKGCMC	1 cut(s)	1900
BseXI	GCAGC	5 cut(s)	1292, 1349, 1883, 2488, 2557
BsgI	GTGCAG	3 cut(s)	1291, 2165, 2564
BshFI	GGCC	4 cut(s)	1976, 2251, 2311, 2445
BshNI	GGYRCC	1 cut(s)	1897
BsiHKAI	GWGCWC	1 cut(s)	2520
BsiHKCI	CYCGRG	3 cut(s)	1675, 1879, 2427
BsiSI	CCGG	1 cut(s)	1880
BslFI	GGGAC	6 cut(s)	565, 1430, 1843, 2323, 2370, 2410
BslI	CCNNNNNNNGG	4 cut(s)	1886, 2237, 2318, 2434
BsmAI	GTCTC	2 cut(s)	1265, 1422
BsmBI	CGTCTC	1 cut(s)	1422
BsmFI	GGGAC	6 cut(s)	565, 1430, 1843, 2323, 2370, 2410
BsmI	GAATGC	1 cut(s)	2032
BsnI	GGCC	4 cut(s)	1976, 2251, 2311, 2445
BsoBI	CYCGRG	3 cut(s)	1675, 1879, 2427
Bsp1286I	GDGCHC	3 cut(s)	1557, 1900, 2520
Bsp1407I	TGTACA	2 cut(s)	1168, 1523
BspACI	CCGC	2 cut(s)	814, 1175
BspANI	GGCC	4 cut(s)	1976, 2251, 2311, 2445
BspCNI	CTCAG	8 cut(s)	115, 1054, 1258, 1441, 1479, 1696, 2053, 2535
BspHI	TCATGA	1 cut(s)	1534
BspLI	GGNNCC	5 cut(s)	70, 1672, 1899, 2205, 2358
BspMI	ACCTGC	4 cut(s)	1234, 1594, 1756, 2008
BspPI	GGATC	7 cut(s)	1042, 1496, 1665, 1678, 1891, 2198, 2211
BspT107I	GGYRCC	1 cut(s)	1897
BsrDI	GCAATG	3 cut(s)	552, 2242, 2533
BsrGI	TGTACA	2 cut(s)	1168, 1523
BsrI	ACTGG	2 cut(s)	291, 1977
BssECI	CCNNGG	5 cut(s)	44, 1683, 1844, 1878, 1879
BssNI	GRCGYC	1 cut(s)	2643
BssT1I	CCWWGG	1 cut(s)	1844
Bst2UI	CCWGG	5 cut(s)	1191, 1685, 2201, 2253, 2465
BstACI	GRCGYC	1 cut(s)	2643
BstAPI	GCANNNNNTGC	1 cut(s)	2480
BstAUI	TGTACA	2 cut(s)	1168, 1523
BstC8I	GCNNGC	5 cut(s)	812, 1376, 2067, 2506, 2510
BstDEI	CTNAG	9 cut(s)	123, 642, 1062, 1266, 1449, 1487, 1704, 2040, 2522
BstDSI	CCRYGG	1 cut(s)	44
BstF5I	GGATG	5 cut(s)	163, 370, 400, 487, 1037
BstMAI	GTCTC	2 cut(s)	1265, 1422
BstMWI	GCNNNNNNNGC	5 cut(s)	376, 1183, 1371, 2036, 2480
BstNI	CCWGG	5 cut(s)	1191, 1685, 2201, 2253, 2465
BstNSI	RCATGY	2 cut(s)	2069, 2508
BstSCI	CCNGG	7 cut(s)	1189, 1683, 1878, 1879, 2199, 2251, 2463
BstSLI	GKGCMC	1 cut(s)	1900
BstV1I	GCAGC	5 cut(s)	1292, 1349, 1883, 2488, 2557
BstV2I	GAAGAC	1 cut(s)	1921
BstX2I	RGATCY	5 cut(s)	908, 1670, 1883, 2090, 2203
BstYI	RGATCY	5 cut(s)	908, 1670, 1883, 2090, 2203
BsuRI	GGCC	4 cut(s)	1976, 2251, 2311, 2445
BtgI	CCRYGG	1 cut(s)	44
BtrI	CACGTC	1 cut(s)	1432
BtsCI	GGATG	5 cut(s)	163, 370, 400, 487, 1037
BtsIMutI	CAGTG	3 cut(s)	1701, 1790, 1904
BveI	ACCTGC	4 cut(s)	1234, 1594, 1756, 2008
Cac8I	GCNNGC	5 cut(s)	812, 1376, 2067, 2506, 2510
CaiI	CAGNNNCTG	2 cut(s)	1418, 1448
CciI	TCATGA	1 cut(s)	1534
Cfr13I	GGNCC	2 cut(s)	833, 2357
Cfr9I	CCCGGG	1 cut(s)	1879
Csp6I	GTAC	9 cut(s)	330, 718, 888, 1169, 1524, 1622, 1639, 2013, 2451
CviQI	GTAC	9 cut(s)	330, 718, 888, 1169, 1524, 1622, 1639, 2013, 2451
DdeI	CTNAG	9 cut(s)	123, 642, 1062, 1266, 1449, 1487, 1704, 2040, 2522
EaeI	YGGCCR	1 cut(s)	1974
Eco130I	CCWWGG	1 cut(s)	1844
Eco24I	GRGCYC	1 cut(s)	1557
Eco47I	GGWCC	2 cut(s)	833, 2357
Eco57I	CTGAAG	1 cut(s)	669
Eco88I	CYCGRG	3 cut(s)	1675, 1879, 2427
EcoO109I	RGGNCCY	1 cut(s)	833
EcoRI	GAATTC	1 cut(s)	1993
EcoRII	CCWGG	5 cut(s)	1189, 1683, 2199, 2251, 2463
EcoT14I	CCWWGG	1 cut(s)	1844
EcoT22I	ATGCAT	1 cut(s)	163
EcoT38I	GRGCYC	1 cut(s)	1557
ErhI	CCWWGG	1 cut(s)	1844
Esp3I	CGTCTC	1 cut(s)	1422
FaqI	GGGAC	6 cut(s)	565, 1430, 1843, 2323, 2370, 2410
FbaI	TGATCA	1 cut(s)	1456
FblI	GTMKAC	1 cut(s)	1654
Fnu4HI	GCNGC	7 cut(s)	815, 1175, 1306, 1363, 1872, 2502, 2546
FokI	GGATG	5 cut(s)	170, 377, 407, 494, 1024
FriOI	GRGCYC	1 cut(s)	1557
Fsp4HI	GCNGC	7 cut(s)	815, 1175, 1306, 1363, 1872, 2502, 2546
FspBI	CTAG	5 cut(s)	116, 570, 1298, 2232, 2498
GluI	GCNGC	7 cut(s)	815, 1175, 1306, 1363, 1872, 2502, 2546
GsuI	CTGGAG	3 cut(s)	392, 509, 2534
HaeIII	GGCC	4 cut(s)	1976, 2251, 2311, 2445
HapII	CCGG	1 cut(s)	1880
Hin1I	GRCGYC	1 cut(s)	2643
HincII	GTYRAC	2 cut(s)	2169, 2685
HindII	GTYRAC	2 cut(s)	2169, 2685
HinfI	GANTC	7 cut(s)	36, 49, 77, 883, 1013, 1355, 1580
HpaII	CCGG	1 cut(s)	1880
Hpy166II	GTNNAC	6 cut(s)	469, 1400, 1655, 1701, 2169, 2685
Hpy8I	GTNNAC	6 cut(s)	469, 1400, 1655, 1701, 2169, 2685
Hpy99I	CGWCG	2 cut(s)	725, 2648
HpyCH4IV	ACGT	4 cut(s)	1431, 1918, 2532, 2643
HpyF10VI	GCNNNNNNNGC	5 cut(s)	376, 1183, 1371, 2036, 2480
HpyF3I	CTNAG	9 cut(s)	123, 642, 1062, 1266, 1449, 1487, 1704, 2040, 2522
HpySE526I	ACGT	4 cut(s)	1431, 1918, 2532, 2643
Hsp92I	GRCGYC	1 cut(s)	2643
Ksp22I	TGATCA	1 cut(s)	1456
LmnI	GCTCC	4 cut(s)	152, 376, 2240, 2515
Lsp1109I	GCAGC	5 cut(s)	1292, 1349, 1883, 2488, 2557
LweI	GCATC	5 cut(s)	148, 170, 779, 1341, 2684
MaeI	CTAG	5 cut(s)	116, 570, 1298, 2232, 2498
MaeII	ACGT	4 cut(s)	1431, 1918, 2532, 2643
MaeIII	GTNAC	3 cut(s)	941, 1438, 2350
MfeI	CAATTG	1 cut(s)	1943
MflI	RGATCY	5 cut(s)	908, 1670, 1883, 2090, 2203
MhlI	GDGCHC	3 cut(s)	1557, 1900, 2520
MlsI	TGGCCA	1 cut(s)	1976
MluNI	TGGCCA	1 cut(s)	1976
MlyI	GAGTC	2 cut(s)	45, 877
MmeI	TCCRAC	4 cut(s)	477, 1065, 1837, 2231
Mox20I	TGGCCA	1 cut(s)	1976
Mph1103I	ATGCAT	1 cut(s)	163
MscI	TGGCCA	1 cut(s)	1976
MseI	TTAA	4 cut(s)	618, 1239, 1785, 1922
MslI	CAYNNNNRTG	1 cut(s)	1539
Msp20I	TGGCCA	1 cut(s)	1976
MspI	CCGG	1 cut(s)	1880
MspR9I	CCNGG	7 cut(s)	1191, 1685, 1880, 1881, 2201, 2253, 2465
MunI	CAATTG	1 cut(s)	1943
Mva1269I	GAATGC	1 cut(s)	2032
MvaI	CCWGG	5 cut(s)	1191, 1685, 2201, 2253, 2465
MwoI	GCNNNNNNNGC	5 cut(s)	376, 1183, 1371, 2036, 2480
NciI	CCSGG	2 cut(s)	1880, 1881
NlaIV	GGNNCC	5 cut(s)	70, 1672, 1899, 2205, 2358
NsiI	ATGCAT	1 cut(s)	163
NspI	RCATGY	2 cut(s)	2069, 2508
PaeI	GCATGC	2 cut(s)	2069, 2508
PaeR7I	CTCGAG	1 cut(s)	1675
PagI	TCATGA	1 cut(s)	1534
PaqCI	CACCTGC	3 cut(s)	1594, 1756, 2008
PctI	GAATGC	1 cut(s)	2032
PfeI	GAWTC	5 cut(s)	49, 77, 1013, 1355, 1580
PflFI	GACNNNGTC	1 cut(s)	643
PflMI	CCANNNNNTGG	1 cut(s)	2318
PfoI	TCCNGGA	2 cut(s)	2199, 2463
PkrI	GCNGC	7 cut(s)	816, 1176, 1307, 1364, 1873, 2503, 2547
PleI	GAGTC	2 cut(s)	44, 877
PpsI	GAGTC	2 cut(s)	44, 877
PpuMI	RGGWCCY	1 cut(s)	833
PsiI	TTATAA	1 cut(s)	63
Psp5II	RGGWCCY	1 cut(s)	833
Psp6I	CCWGG	5 cut(s)	1189, 1683, 2199, 2251, 2463
PspGI	CCWGG	5 cut(s)	1189, 1683, 2199, 2251, 2463
PspN4I	GGNNCC	5 cut(s)	70, 1672, 1899, 2205, 2358
PspPI	GGNCC	2 cut(s)	833, 2357
PspPPI	RGGWCCY	1 cut(s)	833
PspXI	VCTCGAGB	1 cut(s)	1675
PstNI	CAGNNNCTG	2 cut(s)	1418, 1448
PsuI	RGATCY	5 cut(s)	908, 1670, 1883, 2090, 2203
PsyI	GACNNNGTC	1 cut(s)	643
RsaI	GTAC	9 cut(s)	331, 719, 889, 1170, 1525, 1623, 1640, 2014, 2452
RsaNI	GTAC	9 cut(s)	330, 718, 888, 1169, 1524, 1622, 1639, 2013, 2451
RseI	CAYNNNNRTG	1 cut(s)	1539
SaqAI	TTAA	4 cut(s)	618, 1239, 1785, 1922
SatI	GCNGC	7 cut(s)	815, 1175, 1306, 1363, 1872, 2502, 2546
Sau96I	GGNCC	2 cut(s)	833, 2357
ScaI	AGTACT	2 cut(s)	2014, 2452
SchI	GAGTC	2 cut(s)	45, 877
ScrFI	CCNGG	7 cut(s)	1191, 1685, 1880, 1881, 2201, 2253, 2465
SduI	GDGCHC	3 cut(s)	1557, 1900, 2520
SfaNI	GCATC	5 cut(s)	148, 170, 779, 1341, 2684
Sfr274I	CTCGAG	1 cut(s)	1675
SinI	GGWCC	2 cut(s)	833, 2357
SlaI	CTCGAG	1 cut(s)	1675
SmaI	CCCGGG	1 cut(s)	1881
SmiMI	CAYNNNNRTG	1 cut(s)	1539
SmlI	CTYRAG	3 cut(s)	380, 1675, 1818
SmoI	CTYRAG	3 cut(s)	380, 1675, 1818
SphI	GCATGC	2 cut(s)	2069, 2508
SsiI	CCGC	2 cut(s)	814, 1175
SspI	AATATT	1 cut(s)	2317
SspMI	CTAG	5 cut(s)	116, 570, 1298, 2232, 2498
StyD4I	CCNGG	7 cut(s)	1189, 1683, 1878, 1879, 2199, 2251, 2463
StyI	CCWWGG	1 cut(s)	1844
TaiI	ACGT	4 cut(s)	1434, 1921, 2535, 2646
TaqI	TCGA	4 cut(s)	1230, 1500, 1676, 2325
TaqII	GACCGA	2 cut(s)	42, 2374
TatI	WGTACW	4 cut(s)	1168, 1523, 2012, 2450
TauI	GCSGC	2 cut(s)	817, 1177
TfiI	GAWTC	5 cut(s)	49, 77, 1013, 1355, 1580
Tru1I	TTAA	4 cut(s)	618, 1239, 1785, 1922
Tru9I	TTAA	4 cut(s)	618, 1239, 1785, 1922
TscAI	CASTG	3 cut(s)	1708, 1797, 1911
TseI	GCWGC	5 cut(s)	1305, 1362, 1871, 2501, 2545
TspGWI	ACGGA	2 cut(s)	61, 2094
TspMI	CCCGGG	1 cut(s)	1879
TspRI	CASTG	3 cut(s)	1708, 1797, 1911
Tth111I	GACNNNGTC	1 cut(s)	643
Van91I	CCANNNNNTGG	1 cut(s)	2318
VpaK11BI	GGWCC	2 cut(s)	833, 2357
XapI	RAATTY	4 cut(s)	728, 1149, 1254, 1993
XceI	RCATGY	2 cut(s)	2069, 2508
XhoI	CTCGAG	1 cut(s)	1675
XmaI	CCCGGG	1 cut(s)	1879
XmiI	GTMKAC	1 cut(s)	1654
XspI	CTAG	5 cut(s)	116, 570, 1298, 2232, 2498
ZraI	GACGTC	1 cut(s)	2644
ZrmI	AGTACT	2 cut(s)	2014, 2452
Zsp2I	ATGCAT	1 cut(s)	163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.