Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006287

Physical Location & Seq

Genomic Coordinates Reverse (-)

28166696 .. 28170619

Gene Structure 3924 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G316500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGGTAAAGGGAGGGAAGGTTAGTTCCAAGCGAAAATTTACGTCAAGAATTCAGTCAAAGTATAAGGATTCCGATGATTCGGATGAGGATTATGTCATTTCAGATGAAGAAAATGAAGTTTCTGACGATTTGGAGGAGGATTATTGTTCTTCTGTGAATGGAGATGCATCAGAAGAGAGCTTTGGGAGTTTTATTGAGGAGGAGGAAGATGAAGAGGAGGAGGAAGTGAAAAAGGTGAGAAAGATCAGTAGACCAAGAGCAAAAAAGGGTTCAGATGGTTTTATTGTGGATGAGGAGGAGGAAGAAGACGAAGAGGAAATGAATCATGTTAGGAAGGCAGACAGATCAAACGTTCAAAATGGTTTTTCTGGGCGGCAGAAAAATGGGGTTAAACCATCACGAAAGAGGAGAAAGGTTGCATATCAAGAAGCGGAGGATCAAGATTATGATGATGAAGATGATGATGACGATGAGGAGTTTACACCAGATGAAGATGATTTTTCAGAGGTGGAAGAAAAACTGGTGGTGAAAAAGAAGAAAACTAATGTGAAAGTGGGCAAGCGACGTTTGAAGAAAAAGGGTCCTCTAAGAGGTGAAAAAAGTAGAAAATCTGTGGCCTCAAAGAAGCCTTTGAGAAAGAGAGGTAGAAAAGGTCAGGCTGCGAGGAGGAAGGTGAGATGTGATGATGATATTGAAAATGATGGTGATTTTATGGACATTAACCTGCCTGTGAGAGAAAAGAATGAGAAGAAAAGGGTTAGGAAAAGGAGGAGATGTGTTGCACCATCAGATTCAGATGTTGTGTCTTCTGGATCATCTGATTATGACTACACCATCTCCGAGGAAGAGAGAGAGCAAGTGAGGGAAGCCAAGGAGTTGTGTGAAAGCTTGAAAACTAATTTTCGAAGTTCATCCGTGTCTACTAACATTCCGGAGGATAGGCTTGTACAGCAGCCAAGAAAGCCTCCTAGAAGGAAGGGCAAGGAGAAGATTGAGCAAGTGAAGGTGGAGGTGGGAAAGCAGGTCTGTGGAATTTGTCTCTCAGAGGAAGATAAAAGAAGAGTGAGGGGAACACTAGACTGTTGCACTCATTATTTTTGTTTTGTTTGCATCATGGAATGGGGAAAAGTGGAAAGTCGTTGCCCATTGTGCAAGCAGAGGTTTAAGACGATCAGTAAGCCTGCAAGATCTACAACAGGAATTGATTTGAGAGAAGTGGTGATACAGGTCCCTGAGCGTGATCAGGTCTATCAACCGACAGAAGAAGAACTCAGGAGTTATCTTGACCCTTATGAGAATGTGATATGTACGGAATGCCACGAAGGTGGGGAAGATGGCCTCATGTTACTGTGTGATGTATGCGATTCACCTGCTCACACCTATTGTGTTGGTCTTGGGCGGGAAGTACCCGAAGGTAATTGGTACTGTGAGGGTTGTAGACCTGTAGCTATGGGATCCTCAAGTTCACAGGCTCAGGGTCGGTTGTCTGATCAGAGAACTACAAACAACATTTTGTCTAATAGACAATCACCCGTTGTAAATTTTGATGAAGGCTTAGAGATAGATCTTAATTTGATTTCCTCACCTCGTTCACATTTTACTCAAGCATTTGGGAATCCATTATCCCCTAGAGTTCCTGTTGGAGGTTTTCTAGCAGCCTCCCCGGTATCGGGGGGTGGGGCACCAACTTTATCAGGGAGACGCCTAATACAGCGTCATATTCAACAACTCCTTTATGCTAATAGAACGAGTTACATGGCCAGAACTGAGAGGAACTCGTCTGATAATTTGAGTAATGATTTCTTAAATTCTCAAGCTGCTCAGGGGAGGGAAACAACAGTACAACATACAAGGACAGACGAAATGGAGGCATCTTACCATACGTTCTTTGAGGAGAGATTGCAAGAAAACCCTTTAGCACAAGTACAAGATAATGATTTCCTTTCATCAACATCAAGCCATCAGAGAAGGCAAGCAATCCAGGATCCAACTGCACCATCTGCTGGTAGATCTCTCAATGGAGCATTATGGCCTGAAGTTACAGGGATGAATTCAATATCGGGTTATGGGCAGTTCCATCACATCAACAGTATATCAAATATTAGATCTGATGGTGGCGTGCCCCCTACCCCTAATACAGCTATAGAACAGAGTGATTTTCACAGAGCAAAGGAACAGCTGAAAGTGATGGTCAAAGGCCACTTGGATAACTTGTCCCGAGATATTAATTTAGACAAAGGTACTTTTAAGGAAATTGCGAGGAGATCAACGCACACCATCTTAGCTGTATGTGGACGTGAGCACAGAAGCAATGAGGTAGTTGCTGTGTCTCCTCCATCAACCTGCTCCCACGTTGAATTAACGGTGGGCGGAAAGACAAGTCTGATAAGAGGTTGCTGTTCATCTTGTTTTGAATCTTTTGTAGGGGAAGTCGTAAAGAGGATCCTGGATACGAAACTACAGCAGTGGTTGAGATTAGGTCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008623 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016071 GO:0016590 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019899 GO:0019904 GO:0031010 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070063 GO:0070603 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD zf-RING_2

Protein Analysis

829

Amino Acids

93.52

Weight (kDa)

5.81

Isoelectric Point (pI)

63.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05670 AT3G05670 AT3G05670
fragaria_vesca	FvH4_6g07080
malus_domestica	MD04G1196300.v1.1 MD12G1209300.v1.1
prunus_persica	Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1 Prupe.6G316500_v2.0.a1
pyrus_communis	pycom04g17360 pycom12g19660
rosa_chinensis	RchiOBHm_Chr3g0456661
rosa_laevigata	RLG00000025286
rosa_multiflora	Rmu_co8126688.1_g000001 Rmu_sc0000133.1_g000031
rosa_roxburghii	Rroxscaffold_11G00450420 Rroxscaffold_6G00422560
rosa_rugosa	Rorug03G0014500 Rorug03G0014600 Rorug03G0014700 Rorug03G0014800.1
rosa_samantha	Rh3AG075300 Rh3BG077200 Rh3CG076900 Rh3DG078900
rosa_wichuraiana	Rw3G006450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1378
Acc36I	ACCTGC	4 cut(s)	732, 1012, 1378, 2351
AccB1I	GGYRCC	1 cut(s)	1681
AccB7I	CCANNNNNTGG	1 cut(s)	2003
AccI	GTMKAC	3 cut(s)	250, 920, 1438
AccIII	TCCGGA	1 cut(s)	931
AciI	CCGC	4 cut(s)	373, 431, 1399, 2370
AclI	AACGTT	1 cut(s)	351
AclWI	GGATC	8 cut(s)	444, 820, 1449, 1462, 1979, 1992, 2437, 2450
AcoI	YGGCCR	1 cut(s)	1758
AcsI	RAATTY	6 cut(s)	35, 48, 1032, 1540, 1807, 2050
AcuI	CTGAAG	1 cut(s)	2055
AcyI	GRCGYC	1 cut(s)	1702
AfaI	GTAC	7 cut(s)	948, 1309, 1407, 1424, 1842, 1926, 2242
AfiI	CCNNNNNNNGG	5 cut(s)	590, 1643, 1669, 1670, 2003
AgsI	TTSAA	8 cut(s)	356, 571, 695, 892, 1724, 2055, 2357, 2414
AjiI	CACGTC	1 cut(s)	2297
AjnI	CCWGG	2 cut(s)	1980, 2445
AjuI	GAANNNNNNNTTGG	2 cut(s)	165, 197
AleI	CACNNNNGTG	1 cut(s)	1323
AloI	GAACNNNNNNTCC	2 cut(s)	7, 39
AluBI	AGCT	7 cut(s)	180, 888, 1448, 1817, 2141, 2179, 2285
AluI	AGCT	7 cut(s)	180, 888, 1448, 1817, 2141, 2179, 2285
Alw21I	GWGCWC	1 cut(s)	2304
Alw26I	GTCTC	3 cut(s)	1043, 1693, 2334
AlwI	GGATC	8 cut(s)	444, 820, 1449, 1462, 1979, 1992, 2437, 2450
Ama87I	CYCGRG	1 cut(s)	2217
Aor13HI	TCCGGA	1 cut(s)	931
AoxI	GGCC	5 cut(s)	615, 1336, 1758, 2030, 2197
ApeKI	GCWGC	4 cut(s)	659, 952, 1655, 1817
ApoI	RAATTY	6 cut(s)	35, 48, 1032, 1540, 1807, 2050
AseI	ATTAAT	1 cut(s)	2226
AspS9I	GGNCC	2 cut(s)	581, 1228
AsuC2I	CCSGG	1 cut(s)	1664
AsuHPI	GGTGA	9 cut(s)	247, 538, 605, 685, 716, 1231, 1359, 1521, 1575
AsuII	TTCGAA	1 cut(s)	904
AvaI	CYCGRG	1 cut(s)	2217
AvaII	GGWCC	2 cut(s)	581, 1228
BaeGI	GKGCMC	2 cut(s)	1684, 2124
BalI	TGGCCA	1 cut(s)	1760
BamHI	GGATCC	3 cut(s)	1454, 1984, 2442
BanI	GGYRCC	1 cut(s)	1681
BarI	GAAGNNNNNNTAC	2 cut(s)	1206, 1238
BbsI	GAAGAC	2 cut(s)	312, 798
Bbv12I	GWGCWC	1 cut(s)	2304
BbvI	GCAGC	4 cut(s)	646, 964, 1667, 1804
BcgI	CGANNNNNNTGC	2 cut(s)	1352, 1386
BciT130I	CCWGG	2 cut(s)	1982, 2447
BciVI	GTATCC	1 cut(s)	2443
BclI	TGATCA	2 cut(s)	1240, 1489
BcnI	CCSGG	1 cut(s)	1664
BcoDI	GTCTC	3 cut(s)	1043, 1693, 2334
BfaI	CTAG	4 cut(s)	969, 1076, 1629, 1652
BfmI	CTRYAG	4 cut(s)	1443, 2142, 2459, 2483
BfuAI	ACCTGC	4 cut(s)	732, 1012, 1378, 2351
BfuI	GTATCC	1 cut(s)	2443
BglII	AGATCT	4 cut(s)	1187, 1564, 2009, 2105
BisI	GCNGC	5 cut(s)	374, 660, 953, 1656, 1818
BlsI	GCNGC	5 cut(s)	375, 661, 954, 1657, 1819
Bme1390I	CCNGG	3 cut(s)	1664, 1982, 2447
Bme18I	GGWCC	2 cut(s)	581, 1228
BmeT110I	CYCGRG	1 cut(s)	2217
BmgBI	CACGTC	1 cut(s)	2297
BmgT120I	GGNCC	2 cut(s)	581, 1228
BmiI	GGNNCC	6 cut(s)	582, 1230, 1456, 1683, 1986, 2444
BmrFI	CCNGG	3 cut(s)	1664, 1982, 2447
BmsI	GCATC	4 cut(s)	154, 176, 1119, 1880
BpiI	GAAGAC	2 cut(s)	312, 798
BplI	GAGNNNNNCTC	2 cut(s)	1760, 1792
Bpu10I	CCTNAGC	3 cut(s)	1233, 1473, 1821
Bpu14I	TTCGAA	1 cut(s)	904
BpuEI	CTTGAG	3 cut(s)	1444, 1587, 1797
BpuMI	CCSGG	1 cut(s)	1664
BsaHI	GRCGYC	1 cut(s)	1702
BsaJI	CCNNGG	3 cut(s)	840, 870, 1662
BsaWI	WCCGGW	1 cut(s)	931
BsaXI	ACNNNNNCTCC	5 cut(s)	33, 760, 790, 821, 851
Bsc4I	CCNNNNNNNGG	5 cut(s)	590, 1643, 1669, 1670, 2003
Bse1I	ACTGG	1 cut(s)	525
Bse3DI	GCAATG	1 cut(s)	2317
BseAI	TCCGGA	1 cut(s)	931
BseBI	CCWGG	2 cut(s)	1982, 2447
BseDI	CCNNGG	3 cut(s)	840, 870, 1662
BseGI	GGATG	4 cut(s)	88, 295, 911, 2052
BseLI	CCNNNNNNNGG	5 cut(s)	590, 1643, 1669, 1670, 2003
BseMI	GCAATG	1 cut(s)	2317
BseMII	CTCAG	6 cut(s)	1056, 1224, 1285, 1487, 1758, 1835
BseNI	ACTGG	1 cut(s)	525
BseSI	GKGCMC	2 cut(s)	1684, 2124
BseXI	GCAGC	4 cut(s)	646, 964, 1667, 1804
BsgI	GTGCAG	1 cut(s)	1977
BshFI	GGCC	5 cut(s)	617, 1338, 1760, 2032, 2199
BshNI	GGYRCC	1 cut(s)	1681
BsiHKAI	GWGCWC	1 cut(s)	2304
BsiHKCI	CYCGRG	1 cut(s)	2217
BsiSI	CCGG	2 cut(s)	932, 1664
BslFI	GGGAC	2 cut(s)	1214, 2200
BslI	CCNNNNNNNGG	5 cut(s)	590, 1643, 1669, 1670, 2003
BsmAI	GTCTC	3 cut(s)	1043, 1693, 2334
BsmBI	CGTCTC	1 cut(s)	1693
BsmFI	GGGAC	2 cut(s)	1214, 2200
BsmI	GAATGC	1 cut(s)	1319
BsnI	GGCC	5 cut(s)	617, 1338, 1760, 2032, 2199
BsoBI	CYCGRG	1 cut(s)	2217
Bsp119I	TTCGAA	1 cut(s)	904
Bsp1286I	GDGCHC	3 cut(s)	1684, 2124, 2304
Bsp13I	TCCGGA	1 cut(s)	931
Bsp1407I	TGTACA	1 cut(s)	946
BspACI	CCGC	4 cut(s)	373, 431, 1399, 2370
BspANI	GGCC	5 cut(s)	617, 1338, 1760, 2032, 2199
BspCNI	CTCAG	6 cut(s)	1055, 1225, 1284, 1486, 1759, 1834
BspEI	TCCGGA	1 cut(s)	931
BspLI	GGNNCC	6 cut(s)	582, 1230, 1456, 1683, 1986, 2444
BspMI	ACCTGC	4 cut(s)	732, 1012, 1378, 2351
BspPI	GGATC	8 cut(s)	444, 820, 1449, 1462, 1979, 1992, 2437, 2450
BspT104I	TTCGAA	1 cut(s)	904
BspT107I	GGYRCC	1 cut(s)	1681
BsrDI	GCAATG	1 cut(s)	2317
BsrGI	TGTACA	1 cut(s)	946
BsrI	ACTGG	1 cut(s)	525
BssECI	CCNNGG	3 cut(s)	840, 870, 1662
BssNI	GRCGYC	1 cut(s)	1702
BssT1I	CCWWGG	1 cut(s)	870
Bst2UI	CCWGG	2 cut(s)	1982, 2447
Bst4CI	ACNGT	6 cut(s)	1082, 1350, 1427, 1840, 2090, 2365
Bst6I	CTCTTC	5 cut(s)	168, 207, 306, 840, 1054
BstACI	GRCGYC	1 cut(s)	1702
BstAPI	GCANNNNNTGC	1 cut(s)	2000
BstAUI	TGTACA	1 cut(s)	946
BstBI	TTCGAA	1 cut(s)	904
BstC8I	GCNNGC	5 cut(s)	560, 1154, 1182, 1974, 2120
BstDEI	CTNAG	9 cut(s)	587, 1042, 1233, 1271, 1473, 1555, 1767, 1821, 2281
BstENI	CCTNNNNNAGG	2 cut(s)	588, 1641
BstF5I	GGATG	4 cut(s)	88, 295, 911, 2052
BstMAI	GTCTC	3 cut(s)	1043, 1693, 2334
BstMWI	GCNNNNNNNGC	4 cut(s)	949, 961, 1149, 2000
BstNI	CCWGG	2 cut(s)	1982, 2447
BstSCI	CCNGG	3 cut(s)	1662, 1980, 2445
BstSFI	CTRYAG	4 cut(s)	1443, 2142, 2459, 2483
BstSLI	GKGCMC	2 cut(s)	1684, 2124
BstV1I	GCAGC	4 cut(s)	646, 964, 1667, 1804
BstV2I	GAAGAC	2 cut(s)	312, 798
BstX2I	RGATCY	7 cut(s)	1187, 1454, 1564, 1984, 2009, 2105, 2442
BstXI	CCANNNNNNTGG	1 cut(s)	1325
BstYI	RGATCY	7 cut(s)	1187, 1454, 1564, 1984, 2009, 2105, 2442
BsuI	GTATCC	1 cut(s)	2443
BsuRI	GGCC	5 cut(s)	617, 1338, 1760, 2032, 2199
BtrI	CACGTC	1 cut(s)	2297
BtsCI	GGATG	4 cut(s)	88, 295, 911, 2052
BtsI	GCAGTG	1 cut(s)	2471
BtsIMutI	CAGTG	1 cut(s)	2471
BveI	ACCTGC	4 cut(s)	732, 1012, 1378, 2351
Cac8I	GCNNGC	5 cut(s)	560, 1154, 1182, 1974, 2120
Cfr13I	GGNCC	2 cut(s)	581, 1228
CseI	GACGC	2 cut(s)	1703, 1710
Csp6I	GTAC	7 cut(s)	947, 1308, 1406, 1423, 1841, 1925, 2241
CviAII	CATG	4 cut(s)	326, 1114, 1342, 1756
CviQI	GTAC	7 cut(s)	947, 1308, 1406, 1423, 1841, 1925, 2241
DdeI	CTNAG	9 cut(s)	587, 1042, 1233, 1271, 1473, 1555, 1767, 1821, 2281
EaeI	YGGCCR	1 cut(s)	1758
Eam1104I	CTCTTC	5 cut(s)	168, 207, 306, 840, 1054
EarI	CTCTTC	5 cut(s)	168, 207, 306, 840, 1054
EciI	GGCGGA	1 cut(s)	2385
Eco130I	CCWWGG	1 cut(s)	870
Eco47I	GGWCC	2 cut(s)	581, 1228
Eco57I	CTGAAG	1 cut(s)	2055
Eco88I	CYCGRG	1 cut(s)	2217
EcoNI	CCTNNNNNAGG	2 cut(s)	588, 1641
EcoO109I	RGGNCCY	2 cut(s)	581, 1228
EcoRI	GAATTC	2 cut(s)	48, 2050
EcoRII	CCWGG	2 cut(s)	1980, 2445
EcoT14I	CCWWGG	1 cut(s)	870
EcoT22I	ATGCAT	1 cut(s)	169
ErhI	CCWWGG	1 cut(s)	870
Esp3I	CGTCTC	1 cut(s)	1693
FaeI	CATG	4 cut(s)	329, 1117, 1345, 1759
FaqI	GGGAC	2 cut(s)	1214, 2200
FatI	CATG	4 cut(s)	325, 1113, 1341, 1755
FauI	CCCGC	1 cut(s)	1392
FbaI	TGATCA	2 cut(s)	1240, 1489
FblI	GTMKAC	3 cut(s)	250, 920, 1438
Fnu4HI	GCNGC	5 cut(s)	374, 660, 953, 1656, 1818
FokI	GGATG	4 cut(s)	95, 302, 898, 2059
Fsp4HI	GCNGC	5 cut(s)	374, 660, 953, 1656, 1818
FspBI	CTAG	4 cut(s)	969, 1076, 1629, 1652
GluI	GCNGC	5 cut(s)	374, 660, 953, 1656, 1818
HaeIII	GGCC	5 cut(s)	617, 1338, 1760, 2032, 2199
HapII	CCGG	2 cut(s)	932, 1664
HgaI	GACGC	2 cut(s)	1703, 1710
Hin1I	GRCGYC	1 cut(s)	1702
Hin1II	CATG	4 cut(s)	329, 1117, 1345, 1759
HindIII	AAGCTT	1 cut(s)	886
HinfI	GANTC	7 cut(s)	68, 77, 322, 791, 1364, 1615, 2414
HpaII	CCGG	2 cut(s)	932, 1664
HphI	GGTGA	9 cut(s)	247, 538, 605, 685, 716, 1231, 1359, 1521, 1575
Hpy166II	GTNNAC	7 cut(s)	251, 480, 921, 1439, 1466, 1592, 2294
Hpy188III	TCNNGA	9 cut(s)	45, 399, 425, 440, 810, 932, 1273, 1283, 2217
Hpy8I	GTNNAC	7 cut(s)	251, 480, 921, 1439, 1466, 1592, 2294
Hpy99I	CGWCG	1 cut(s)	567
HpyCH4III	ACNGT	6 cut(s)	1082, 1350, 1427, 1840, 2090, 2365
HpyCH4IV	ACGT	6 cut(s)	41, 351, 565, 1883, 2296, 2352
HpyCH4V	TGCA	9 cut(s)	167, 419, 782, 1086, 1110, 1152, 1184, 1903, 1994
HpyF10VI	GCNNNNNNNGC	4 cut(s)	949, 961, 1149, 2000
HpyF3I	CTNAG	9 cut(s)	587, 1042, 1233, 1271, 1473, 1555, 1767, 1821, 2281
HpySE526I	ACGT	6 cut(s)	41, 351, 565, 1883, 2296, 2352
Hsp92I	GRCGYC	1 cut(s)	1702
Hsp92II	CATG	4 cut(s)	329, 1117, 1345, 1759
Kpn2I	TCCGGA	1 cut(s)	931
Ksp22I	TGATCA	2 cut(s)	1240, 1489
LmnI	GCTCC	2 cut(s)	2021, 2351
Lsp1109I	GCAGC	4 cut(s)	646, 964, 1667, 1804
LweI	GCATC	4 cut(s)	154, 176, 1119, 1880
MaeI	CTAG	4 cut(s)	969, 1076, 1629, 1652
MaeII	ACGT	6 cut(s)	41, 351, 565, 1883, 2296, 2352
MaeIII	GTNAC	3 cut(s)	1344, 1751, 2038
MflI	RGATCY	7 cut(s)	1187, 1454, 1564, 1984, 2009, 2105, 2442
MhlI	GDGCHC	3 cut(s)	1684, 2124, 2304
MlsI	TGGCCA	1 cut(s)	1760
MluNI	TGGCCA	1 cut(s)	1760
MmeI	TCCRAC	2 cut(s)	1621, 2012
Mox20I	TGGCCA	1 cut(s)	1760
Mph1103I	ATGCAT	1 cut(s)	169
MroI	TCCGGA	1 cut(s)	931
MscI	TGGCCA	1 cut(s)	1760
MseI	TTAA	8 cut(s)	390, 720, 1164, 1569, 1805, 2226, 2247, 2360
MslI	CAYNNNNRTG	1 cut(s)	1323
Msp20I	TGGCCA	1 cut(s)	1760
MspA1I	CMGCKG	1 cut(s)	2179
MspI	CCGG	2 cut(s)	932, 1664
MspR9I	CCNGG	3 cut(s)	1664, 1982, 2447
Mva1269I	GAATGC	1 cut(s)	1319
MvaI	CCWGG	2 cut(s)	1982, 2447
MwoI	GCNNNNNNNGC	4 cut(s)	949, 961, 1149, 2000
NciI	CCSGG	1 cut(s)	1664
NlaIII	CATG	4 cut(s)	329, 1117, 1345, 1759
NlaIV	GGNNCC	6 cut(s)	582, 1230, 1456, 1683, 1986, 2444
NsiI	ATGCAT	1 cut(s)	169
NspV	TTCGAA	1 cut(s)	904
OliI	CACNNNNGTG	1 cut(s)	1323
PaqCI	CACCTGC	1 cut(s)	1378
PctI	GAATGC	1 cut(s)	1319
PfeI	GAWTC	7 cut(s)	68, 77, 322, 791, 1364, 1615, 2414
PflMI	CCANNNNNTGG	1 cut(s)	2003
PfoI	TCCNGGA	2 cut(s)	1980, 2445
PkrI	GCNGC	5 cut(s)	375, 661, 954, 1657, 1819
PpuMI	RGGWCCY	2 cut(s)	581, 1228
PshBI	ATTAAT	1 cut(s)	2226
Psp1406I	AACGTT	1 cut(s)	351
Psp5II	RGGWCCY	2 cut(s)	581, 1228
Psp6I	CCWGG	2 cut(s)	1980, 2445
PspGI	CCWGG	2 cut(s)	1980, 2445
PspN4I	GGNNCC	6 cut(s)	582, 1230, 1456, 1683, 1986, 2444
PspPI	GGNCC	2 cut(s)	581, 1228
PspPPI	RGGWCCY	2 cut(s)	581, 1228
PsuI	RGATCY	7 cut(s)	1187, 1454, 1564, 1984, 2009, 2105, 2442
PvuII	CAGCTG	1 cut(s)	2179
RsaI	GTAC	7 cut(s)	948, 1309, 1407, 1424, 1842, 1926, 2242
RsaNI	GTAC	7 cut(s)	947, 1308, 1406, 1423, 1841, 1925, 2241
RseI	CAYNNNNRTG	1 cut(s)	1323
SaqAI	TTAA	8 cut(s)	390, 720, 1164, 1569, 1805, 2226, 2247, 2360
SatI	GCNGC	5 cut(s)	374, 660, 953, 1656, 1818
Sau96I	GGNCC	2 cut(s)	581, 1228
ScrFI	CCNGG	3 cut(s)	1664, 1982, 2447
SduI	GDGCHC	3 cut(s)	1684, 2124, 2304
SfaNI	GCATC	4 cut(s)	154, 176, 1119, 1880
SfcI	CTRYAG	4 cut(s)	1443, 2142, 2459, 2483
SfuI	TTCGAA	1 cut(s)	904
SinI	GGWCC	2 cut(s)	581, 1228
SmiMI	CAYNNNNRTG	1 cut(s)	1323
SmlI	CTYRAG	3 cut(s)	1459, 1602, 1812
SmoI	CTYRAG	3 cut(s)	1459, 1602, 1812
SsiI	CCGC	4 cut(s)	373, 431, 1399, 2370
SspI	AATATT	1 cut(s)	2101
SspMI	CTAG	4 cut(s)	969, 1076, 1629, 1652
StyD4I	CCNGG	3 cut(s)	1662, 1980, 2445
StyI	CCWWGG	1 cut(s)	870
TaaI	ACNGT	6 cut(s)	1082, 1350, 1427, 1840, 2090, 2365
TaiI	ACGT	6 cut(s)	44, 354, 568, 1886, 2299, 2355
TaqI	TCGA	1 cut(s)	904
TatI	WGTACW	3 cut(s)	946, 1840, 1924
TauI	GCSGC	1 cut(s)	376
TfiI	GAWTC	7 cut(s)	68, 77, 322, 791, 1364, 1615, 2414
Tru1I	TTAA	8 cut(s)	390, 720, 1164, 1569, 1805, 2226, 2247, 2360
Tru9I	TTAA	8 cut(s)	390, 720, 1164, 1569, 1805, 2226, 2247, 2360
TscAI	CASTG	1 cut(s)	2471
TseI	GCWGC	4 cut(s)	659, 952, 1655, 1817
TspGWI	ACGGA	2 cut(s)	904, 1325
TspRI	CASTG	1 cut(s)	2471
Van91I	CCANNNNNTGG	1 cut(s)	2003
VpaK11BI	GGWCC	2 cut(s)	581, 1228
VspI	ATTAAT	1 cut(s)	2226
XagI	CCTNNNNNAGG	2 cut(s)	588, 1641
XapI	RAATTY	6 cut(s)	35, 48, 1032, 1540, 1807, 2050
XmiI	GTMKAC	3 cut(s)	250, 920, 1438
XspI	CTAG	4 cut(s)	969, 1076, 1629, 1652
Zsp2I	ATGCAT	1 cut(s)	169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.