positive regulation of transcription, DNA-templated
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10500 AT3G10500 AT5G04410 |
| fragaria_vesca | FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 |
| malus_domestica | MD02G1243200.v1.1 MD02G1243600.v1.1 MD02G1243800.v1.1 MD07G1073200.v1.1 |
| prunus_persica | Prupe.2G091500_v2.0.a1 |
| pyrus_communis | pycom02g20980 pycom07g05650 pycom07g05660 pycom07g05670 |
| rosa_chinensis | RchiOBHm_Chr1g0334901 |
| rosa_laevigata | RLG00000029411 |
| rosa_multiflora | Rmu_co8457141.1_g000001 Rmu_sc0000574.1_g000049 |
| rosa_roxburghii | Rroxscaffold_1G00037320 Rroxscaffold_4G00316370 |
| rosa_rugosa | Rorug01G0117800 |
| rosa_samantha | Rh1AG141300 Rh1BG108800 Rh1CG133200 Rh1DG145700 Rh5CG119700 Rh5DG106800 |
| rosa_wichuraiana | Rw1G011710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1427 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1330 |
| AccI | GTMKAC | 1 cut(s) | 138 |
| AccIII | TCCGGA | 1 cut(s) | 485 |
| AciI | CCGC | 3 cut(s) | 1349, 1434, 1536 |
| AclWI | GGATC | 6 cut(s) | 165, 247, 980, 993, 1100, 1498 |
| AcuI | CTGAAG | 1 cut(s) | 193 |
| AfaI | GTAC | 6 cut(s) | 203, 509, 564, 1022, 1048, 1301 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 497, 1330, 1378, 1513 |
| AflIII | ACRYGT | 2 cut(s) | 1213, 1326 |
| AgsI | TTSAA | 8 cut(s) | 315, 707, 845, 1073, 1163, 1203, 1254, 1621 |
| AjnI | CCWGG | 4 cut(s) | 31, 870, 1023, 1643 |
| AluBI | AGCT | 3 cut(s) | 362, 1156, 1388 |
| AluI | AGCT | 3 cut(s) | 362, 1156, 1388 |
| Alw21I | GWGCWC | 3 cut(s) | 364, 517, 1158 |
| Alw26I | GTCTC | 4 cut(s) | 183, 1166, 1190, 1642 |
| AlwI | GGATC | 6 cut(s) | 165, 247, 980, 993, 1100, 1498 |
| Aor13HI | TCCGGA | 1 cut(s) | 485 |
| ApeKI | GCWGC | 2 cut(s) | 1385, 1403 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 896, 928 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 66 |
| AspS9I | GGNCC | 3 cut(s) | 488, 868, 1522 |
| AsuHPI | GGTGA | 2 cut(s) | 431, 983 |
| AvaII | GGWCC | 3 cut(s) | 488, 868, 1522 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 546, 579 |
| BamHI | GGATCC | 1 cut(s) | 985 |
| BanII | GRGCYC | 2 cut(s) | 364, 1158 |
| BauI | CACGAG | 1 cut(s) | 366 |
| BbsI | GAAGAC | 2 cut(s) | 284, 341 |
| Bbv12I | GWGCWC | 3 cut(s) | 364, 517, 1158 |
| BbvI | GCAGC | 2 cut(s) | 1397, 1415 |
| BccI | CCATC | 5 cut(s) | 259, 827, 1007, 1052, 1114 |
| BceAI | ACGGC | 1 cut(s) | 1495 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 75, 109, 383, 417 |
| BciT130I | CCWGG | 4 cut(s) | 33, 872, 1025, 1645 |
| BclI | TGATCA | 3 cut(s) | 412, 622, 1443 |
| BcoDI | GTCTC | 4 cut(s) | 183, 1166, 1190, 1642 |
| BfaI | CTAG | 1 cut(s) | 1184 |
| BfmI | CTRYAG | 1 cut(s) | 282 |
| BfuAI | ACCTGC | 1 cut(s) | 1427 |
| BglII | AGATCT | 2 cut(s) | 90, 577 |
| BisI | GCNGC | 2 cut(s) | 1386, 1404 |
| BlsI | GCNGC | 2 cut(s) | 1387, 1405 |
| BmcAI | AGTACT | 1 cut(s) | 1048 |
| Bme1390I | CCNGG | 4 cut(s) | 33, 872, 1025, 1645 |
| Bme18I | GGWCC | 3 cut(s) | 488, 868, 1522 |
| BmgT120I | GGNCC | 3 cut(s) | 488, 868, 1522 |
| BmiI | GGNNCC | 3 cut(s) | 484, 869, 987 |
| BmrFI | CCNGG | 4 cut(s) | 33, 872, 1025, 1645 |
| BmsI | GCATC | 7 cut(s) | 106, 436, 643, 1253, 1255, 1261, 1372 |
| BpiI | GAAGAC | 2 cut(s) | 284, 341 |
| BpmI | CTGGAG | 1 cut(s) | 1025 |
| BsaI | GGTCTC | 1 cut(s) | 1642 |
| BsaJI | CCNNGG | 3 cut(s) | 32, 152, 1525 |
| BsaWI | WCCGGW | 2 cut(s) | 485, 1392 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 707, 737 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 497, 1330, 1378, 1513 |
| Bse1I | ACTGG | 2 cut(s) | 436, 947 |
| Bse3DI | GCAATG | 1 cut(s) | 1578 |
| BseAI | TCCGGA | 1 cut(s) | 485 |
| BseBI | CCWGG | 4 cut(s) | 33, 872, 1025, 1645 |
| BseDI | CCNNGG | 3 cut(s) | 32, 152, 1525 |
| BseGI | GGATG | 8 cut(s) | 46, 333, 553, 619, 819, 866, 1243, 1387 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 497, 1330, 1378, 1513 |
| BseMI | GCAATG | 1 cut(s) | 1578 |
| BseMII | CTCAG | 8 cut(s) | 27, 138, 252, 732, 1054, 1064, 1356, 1623 |
| BseNI | ACTGG | 2 cut(s) | 436, 947 |
| BseRI | GAGGAG | 6 cut(s) | 354, 542, 545, 554, 557, 1208 |
| BseXI | GCAGC | 2 cut(s) | 1397, 1415 |
| BsiHKAI | GWGCWC | 3 cut(s) | 364, 517, 1158 |
| BsiSI | CCGG | 2 cut(s) | 486, 1393 |
| BslFI | GGGAC | 1 cut(s) | 931 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 497, 1330, 1378, 1513 |
| BsmAI | GTCTC | 4 cut(s) | 183, 1166, 1190, 1642 |
| BsmFI | GGGAC | 1 cut(s) | 931 |
| Bso31I | GGTCTC | 1 cut(s) | 1642 |
| Bsp1286I | GDGCHC | 3 cut(s) | 364, 517, 1158 |
| Bsp13I | TCCGGA | 1 cut(s) | 485 |
| BspACI | CCGC | 3 cut(s) | 1349, 1434, 1536 |
| BspCNI | CTCAG | 8 cut(s) | 26, 139, 253, 731, 1053, 1063, 1357, 1622 |
| BspEI | TCCGGA | 1 cut(s) | 485 |
| BspLI | GGNNCC | 3 cut(s) | 484, 869, 987 |
| BspMI | ACCTGC | 1 cut(s) | 1427 |
| BspPI | GGATC | 6 cut(s) | 165, 247, 980, 993, 1100, 1498 |
| BspQI | GCTCTTC | 1 cut(s) | 1146 |
| BspTNI | GGTCTC | 1 cut(s) | 1642 |
| BsrDI | GCAATG | 1 cut(s) | 1578 |
| BsrI | ACTGG | 2 cut(s) | 436, 947 |
| BssECI | CCNNGG | 3 cut(s) | 32, 152, 1525 |
| BssNAI | GTATAC | 1 cut(s) | 139 |
| BssSI | CACGAG | 1 cut(s) | 366 |
| BssT1I | CCWWGG | 2 cut(s) | 152, 1525 |
| Bst1107I | GTATAC | 1 cut(s) | 139 |
| Bst2BI | CACGAG | 1 cut(s) | 366 |
| Bst2UI | CCWGG | 4 cut(s) | 33, 872, 1025, 1645 |
| Bst4CI | ACNGT | 3 cut(s) | 512, 830, 995 |
| Bst6I | CTCTTC | 3 cut(s) | 470, 1146, 1645 |
| BstC8I | GCNNGC | 3 cut(s) | 27, 1321, 1353 |
| BstDEI | CTNAG | 9 cut(s) | 13, 147, 261, 718, 1040, 1050, 1176, 1365, 1609 |
| BstF5I | GGATG | 8 cut(s) | 46, 333, 553, 619, 819, 866, 1243, 1387 |
| BstMAI | GTCTC | 4 cut(s) | 183, 1166, 1190, 1642 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1343, 1352, 1467 |
| BstNI | CCWGG | 4 cut(s) | 33, 872, 1025, 1645 |
| BstNSI | RCATGY | 2 cut(s) | 1217, 1330 |
| BstSCI | CCNGG | 4 cut(s) | 31, 870, 1023, 1643 |
| BstSFI | CTRYAG | 1 cut(s) | 282 |
| BstV1I | GCAGC | 2 cut(s) | 1397, 1415 |
| BstV2I | GAAGAC | 2 cut(s) | 284, 341 |
| BstX2I | RGATCY | 4 cut(s) | 90, 157, 577, 985 |
| BstYI | RGATCY | 4 cut(s) | 90, 157, 577, 985 |
| BstZ17I | GTATAC | 1 cut(s) | 139 |
| BtgZI | GCGATG | 1 cut(s) | 6 |
| BtsCI | GGATG | 8 cut(s) | 46, 333, 553, 619, 819, 866, 1243, 1387 |
| BveI | ACCTGC | 1 cut(s) | 1427 |
| Cac8I | GCNNGC | 3 cut(s) | 27, 1321, 1353 |
| Cfr13I | GGNCC | 3 cut(s) | 488, 868, 1522 |
| Csp6I | GTAC | 6 cut(s) | 202, 508, 563, 1021, 1047, 1300 |
| CviAII | CATG | 9 cut(s) | 395, 596, 930, 1214, 1327, 1427, 1465, 1566, 1585 |
| CviQI | GTAC | 6 cut(s) | 202, 508, 563, 1021, 1047, 1300 |
| DdeI | CTNAG | 9 cut(s) | 13, 147, 261, 718, 1040, 1050, 1176, 1365, 1609 |
| Eam1104I | CTCTTC | 3 cut(s) | 470, 1146, 1645 |
| EarI | CTCTTC | 3 cut(s) | 470, 1146, 1645 |
| Ecl136II | GAGCTC | 2 cut(s) | 362, 1156 |
| Eco130I | CCWWGG | 2 cut(s) | 152, 1525 |
| Eco24I | GRGCYC | 2 cut(s) | 364, 1158 |
| Eco31I | GGTCTC | 1 cut(s) | 1642 |
| Eco32I | GATATC | 1 cut(s) | 1452 |
| Eco47I | GGWCC | 3 cut(s) | 488, 868, 1522 |
| Eco53kI | GAGCTC | 2 cut(s) | 362, 1156 |
| Eco57I | CTGAAG | 1 cut(s) | 193 |
| EcoICRI | GAGCTC | 2 cut(s) | 362, 1156 |
| EcoRII | CCWGG | 4 cut(s) | 31, 870, 1023, 1643 |
| EcoRV | GATATC | 1 cut(s) | 1452 |
| EcoT14I | CCWWGG | 2 cut(s) | 152, 1525 |
| EcoT22I | ATGCAT | 1 cut(s) | 396 |
| EcoT38I | GRGCYC | 2 cut(s) | 364, 1158 |
| ErhI | CCWWGG | 2 cut(s) | 152, 1525 |
| FaeI | CATG | 9 cut(s) | 398, 599, 933, 1217, 1330, 1430, 1468, 1569, 1588 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 564, 596, 1065, 1097 |
| FaqI | GGGAC | 1 cut(s) | 931 |
| FatI | CATG | 9 cut(s) | 394, 595, 929, 1213, 1326, 1426, 1464, 1565, 1584 |
| FauNDI | CATATG | 1 cut(s) | 609 |
| FbaI | TGATCA | 3 cut(s) | 412, 622, 1443 |
| FblI | GTMKAC | 1 cut(s) | 138 |
| Fnu4HI | GCNGC | 2 cut(s) | 1386, 1404 |
| FokI | GGATG | 8 cut(s) | 33, 340, 560, 626, 806, 873, 1250, 1394 |
| FriOI | GRGCYC | 2 cut(s) | 364, 1158 |
| Fsp4HI | GCNGC | 2 cut(s) | 1386, 1404 |
| FspBI | CTAG | 1 cut(s) | 1184 |
| GluI | GCNGC | 2 cut(s) | 1386, 1404 |
| GsuI | CTGGAG | 1 cut(s) | 1025 |
| HapII | CCGG | 2 cut(s) | 486, 1393 |
| Hin1II | CATG | 9 cut(s) | 398, 599, 933, 1217, 1330, 1430, 1468, 1569, 1588 |
| HinfI | GANTC | 7 cut(s) | 250, 301, 337, 689, 722, 761, 791 |
| HpaII | CCGG | 2 cut(s) | 486, 1393 |
| HphI | GGTGA | 2 cut(s) | 431, 983 |
| Hpy166II | GTNNAC | 2 cut(s) | 139, 439 |
| Hpy188III | TCNNGA | 9 cut(s) | 296, 416, 486, 983, 1004, 1148, 1163, 1203, 1447 |
| Hpy8I | GTNNAC | 2 cut(s) | 139, 439 |
| HpyAV | CCTTC | 5 cut(s) | 845, 851, 1096, 1119, 1309 |
| HpyCH4III | ACNGT | 3 cut(s) | 512, 830, 995 |
| HpyCH4V | TGCA | 7 cut(s) | 96, 394, 895, 1268, 1274, 1355, 1385 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1343, 1352, 1467 |
| HpyF3I | CTNAG | 9 cut(s) | 13, 147, 261, 718, 1040, 1050, 1176, 1365, 1609 |
| Hsp92II | CATG | 9 cut(s) | 398, 599, 933, 1217, 1330, 1430, 1468, 1569, 1588 |
| Kpn2I | TCCGGA | 1 cut(s) | 485 |
| Ksp22I | TGATCA | 3 cut(s) | 412, 622, 1443 |
| LguI | GCTCTTC | 1 cut(s) | 1146 |
| LmnI | GCTCC | 5 cut(s) | 34, 367, 488, 520, 1351 |
| Lsp1109I | GCAGC | 2 cut(s) | 1397, 1415 |
| LweI | GCATC | 7 cut(s) | 106, 436, 643, 1253, 1255, 1261, 1372 |
| MaeI | CTAG | 1 cut(s) | 1184 |
| MaeIII | GTNAC | 7 cut(s) | 16, 71, 127, 824, 1305, 1395, 1429 |
| MfeI | CAATTG | 1 cut(s) | 382 |
| MflI | RGATCY | 4 cut(s) | 90, 157, 577, 985 |
| MhlI | GDGCHC | 3 cut(s) | 364, 517, 1158 |
| MluCI | AATT | 2 cut(s) | 382, 855 |
| MlyI | GAGTC | 4 cut(s) | 331, 698, 716, 755 |
| Mph1103I | ATGCAT | 1 cut(s) | 396 |
| MroI | TCCGGA | 1 cut(s) | 485 |
| MroXI | GAANNNNTTC | 1 cut(s) | 66 |
| MseI | TTAA | 4 cut(s) | 108, 306, 671, 1577 |
| MslI | CAYNNNNRTG | 3 cut(s) | 444, 600, 612 |
| MspI | CCGG | 2 cut(s) | 486, 1393 |
| MspR9I | CCNGG | 4 cut(s) | 33, 872, 1025, 1645 |
| MunI | CAATTG | 1 cut(s) | 382 |
| MvaI | CCWGG | 4 cut(s) | 33, 872, 1025, 1645 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1343, 1352, 1467 |
| NdeI | CATATG | 1 cut(s) | 609 |
| NlaIII | CATG | 9 cut(s) | 398, 599, 933, 1217, 1330, 1430, 1468, 1569, 1588 |
| NlaIV | GGNNCC | 3 cut(s) | 484, 869, 987 |
| NmuCI | GTSAC | 1 cut(s) | 824 |
| NsiI | ATGCAT | 1 cut(s) | 396 |
| NspI | RCATGY | 2 cut(s) | 1217, 1330 |
| PciI | ACATGT | 2 cut(s) | 1213, 1326 |
| PciSI | GCTCTTC | 1 cut(s) | 1146 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 63, 254, 364, 1485 |
| PdmI | GAANNNNTTC | 1 cut(s) | 66 |
| PfeI | GAWTC | 3 cut(s) | 250, 301, 791 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1330 |
| PfoI | TCCNGGA | 1 cut(s) | 870 |
| PkrI | GCNGC | 2 cut(s) | 1387, 1405 |
| PleI | GAGTC | 4 cut(s) | 331, 697, 716, 755 |
| PpsI | GAGTC | 4 cut(s) | 331, 697, 716, 755 |
| PscI | ACATGT | 2 cut(s) | 1213, 1326 |
| Psp124BI | GAGCTC | 2 cut(s) | 364, 1158 |
| Psp6I | CCWGG | 4 cut(s) | 31, 870, 1023, 1643 |
| PspGI | CCWGG | 4 cut(s) | 31, 870, 1023, 1643 |
| PspN4I | GGNNCC | 3 cut(s) | 484, 869, 987 |
| PspPI | GGNCC | 3 cut(s) | 488, 868, 1522 |
| PsuI | RGATCY | 4 cut(s) | 90, 157, 577, 985 |
| RsaI | GTAC | 6 cut(s) | 203, 509, 564, 1022, 1048, 1301 |
| RsaNI | GTAC | 6 cut(s) | 202, 508, 563, 1021, 1047, 1300 |
| RseI | CAYNNNNRTG | 3 cut(s) | 444, 600, 612 |
| SacI | GAGCTC | 2 cut(s) | 364, 1158 |
| SapI | GCTCTTC | 1 cut(s) | 1146 |
| SaqAI | TTAA | 4 cut(s) | 108, 306, 671, 1577 |
| SatI | GCNGC | 2 cut(s) | 1386, 1404 |
| Sau96I | GGNCC | 3 cut(s) | 488, 868, 1522 |
| ScaI | AGTACT | 1 cut(s) | 1048 |
| SchI | GAGTC | 4 cut(s) | 331, 698, 716, 755 |
| ScrFI | CCNGG | 4 cut(s) | 33, 872, 1025, 1645 |
| SduI | GDGCHC | 3 cut(s) | 364, 517, 1158 |
| SfaNI | GCATC | 7 cut(s) | 106, 436, 643, 1253, 1255, 1261, 1372 |
| SfcI | CTRYAG | 1 cut(s) | 282 |
| SinI | GGWCC | 3 cut(s) | 488, 868, 1522 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 444, 600, 612 |
| Sse9I | AATT | 2 cut(s) | 382, 855 |
| SsiI | CCGC | 3 cut(s) | 1349, 1434, 1536 |
| SspI | AATATT | 1 cut(s) | 1581 |
| SspMI | CTAG | 1 cut(s) | 1184 |
| SstI | GAGCTC | 2 cut(s) | 364, 1158 |
| StyD4I | CCNGG | 4 cut(s) | 31, 870, 1023, 1643 |
| StyI | CCWWGG | 2 cut(s) | 152, 1525 |
| TaaI | ACNGT | 3 cut(s) | 512, 830, 995 |
| TaqI | TCGA | 7 cut(s) | 114, 173, 295, 358, 692, 1065, 1143 |
| TasI | AATT | 2 cut(s) | 382, 855 |
| TatI | WGTACW | 1 cut(s) | 1046 |
| TfiI | GAWTC | 3 cut(s) | 250, 301, 791 |
| Tru1I | TTAA | 4 cut(s) | 108, 306, 671, 1577 |
| Tru9I | TTAA | 4 cut(s) | 108, 306, 671, 1577 |
| TseFI | GTSAC | 1 cut(s) | 824 |
| TseI | GCWGC | 2 cut(s) | 1385, 1403 |
| Tsp45I | GTSAC | 1 cut(s) | 824 |
| TspDTI | ATGAA | 8 cut(s) | 35, 344, 864, 1110, 1143, 1254, 1415, 1573 |
| TspGWI | ACGGA | 3 cut(s) | 507, 657, 812 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1330 |
| VpaK11BI | GGWCC | 3 cut(s) | 488, 868, 1522 |
| XceI | RCATGY | 2 cut(s) | 1217, 1330 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 578 |
| XmiI | GTMKAC | 1 cut(s) | 138 |
| XmnI | GAANNNNTTC | 1 cut(s) | 66 |
| XspI | CTAG | 1 cut(s) | 1184 |
| ZrmI | AGTACT | 1 cut(s) | 1048 |
| Zsp2I | ATGCAT | 1 cut(s) | 396 |