Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0004124

Physical Location & Seq

Genomic Coordinates Forward (+)

29219303 .. 29223661

Gene Structure 4359 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG133200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGGGCCGTCAGTCTTCGCAATCGCTCGCTCCCGGGTTCCGATTCCACCCCACCGATGAAGAACTTGTCTGGTACTACCTGAAGCGCAAGGTCGCCGGAAAATCTTTCCGCTTCGACGCCATCTCCGTCGTCGATATCTACAAGATCGAGCCTTGGGACCTCCCTGGGAAGTCGAAGCTGAAAAGCAGGGACACGGAGTGGTACTTCTTCAGTCTTCTGGACAAGAAGTATGGAAATTCGTCGAGGACGAATCGGGCTACCGAAAAAGGGTACTGGAAGACTACTGGGAAGGATCGACCCGTTTGCCATAATTCCAGGGCGGTGGGGATGAAGAAGACCCTTGTTTTCCACAGTGGCCGGGCCCCCAAAGGTGCCAGGACCAATTGGGTTATGCATGAGTACCGCCTCGATAACCAGGAATTGGAGAAAGCTGGAATAATAGAGAAAGATGCGTATGTGCTCTGTAGGATATTCCAGAAGAGTGGTACTGGGCCCAAGAATGGGGAGCAGTATGGTGCTCCATTTATTGAGGAGGAATGGGATGAAGAAGATGAGGTTTATGGACCTGGTGAAGAGGCTATTGCTAATGAAGTAGCAGTCAGCGGTGGGCCGTATACTGAAGGAAATGAGCTCAGCGATGGGGGATATGTTGAGGCAATTGACCTTGATCAGTCTGTTATGGGTGAAACGCAGCCACTATCCACAGGAAGCCAACATCTTGTAGAGGCACATGATGTCAATGATGCATCTTCATCAAAACAAAAGCCGGACATGAAATTTGTATCAGATGGCAAGTTTCCATTCATCACAAAGGCGAGTCACATGTTGGGCAGTATACCTGCTCCTCCTGCATTTGCTTCAGAGTTCCCTCCTAAAGATGCAATCCGTCGGTTGAATTCGGAAGTAGCATCCTCAAGTTCAGTTCATGCTGGCATGATCAGAATAAGAGACATAACTTCAAGCGACAACAGGGTGGAATGGTCTATTGGTAAGGATGGGGTTGTCAACCTTGTGTTTTCTGTTCAGCTGCCGCAAAGTGATGTCACTTCTTCCAACCTGGTACCAATGGGTGGCTCAGTCTCTGGCAAGACAGGATCTGTGGTCATGCGGGGCTGGTTTCTGTTCATGTTCTTCTGGGTCCTATTTATTTCCATCAGTTTCAAAATCGGGAGCTATATATATGCCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0007275 GO:0007568 GO:0008150 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009819 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0010035 GO:0010150 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

396

Amino Acids

44.13

Weight (kDa)

6.48

Isoelectric Point (pI)

36.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	11 - 136	6.8e-48	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10500 AT3G10500 AT5G04410
fragaria_vesca	FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501
malus_domestica	MD02G1243200.v1.1 MD02G1243600.v1.1 MD02G1243800.v1.1 MD07G1073200.v1.1
prunus_persica	Prupe.2G091500_v2.0.a1
pyrus_communis	pycom02g20980 pycom07g05650 pycom07g05660 pycom07g05670
rosa_chinensis	RchiOBHm_Chr1g0334901
rosa_laevigata	RLG00000029411
rosa_multiflora	Rmu_co8457141.1_g000001 Rmu_sc0000574.1_g000049
rosa_roxburghii	Rroxscaffold_1G00037320 Rroxscaffold_4G00316370
rosa_rugosa	Rorug01G0117800
rosa_samantha	Rh1AG141300 Rh1BG108800 Rh1CG133200 Rh1DG145700 Rh5CG119700 Rh5DG106800
rosa_wichuraiana	Rw1G011710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	847
Acc65I	GGTACC	1 cut(s)	1060
AccB1I	GGYRCC	2 cut(s)	371, 1060
AccB7I	CCANNNNNTGG	2 cut(s)	421, 1070
AccI	GTMKAC	2 cut(s)	614, 835
AciI	CCGC	6 cut(s)	109, 320, 403, 603, 1031, 1108
AclWI	GGATC	2 cut(s)	300, 1102
AcoI	YGGCCR	1 cut(s)	355
AcsI	RAATTY	3 cut(s)	235, 776, 895
AcuI	CTGAAG	4 cut(s)	101, 193, 639, 843
AcyI	GRCGYC	1 cut(s)	117
AdeI	CACNNNGTG	1 cut(s)	198
AfaI	GTAC	6 cut(s)	74, 203, 272, 401, 487, 1062
AfiI	CCNNNNNNNGG	5 cut(s)	267, 421, 500, 501, 1070
AflIII	ACRYGT	1 cut(s)	822
AgsI	TTSAA	3 cut(s)	895, 960, 1162
AjnI	CCWGG	6 cut(s)	163, 314, 374, 414, 565, 1056
AjuI	GAANNNNNNNTTGG	2 cut(s)	969, 1001
AluBI	AGCT	5 cut(s)	178, 431, 631, 1027, 1173
AluI	AGCT	5 cut(s)	178, 431, 631, 1027, 1173
Alw21I	GWGCWC	3 cut(s)	462, 520, 633
Alw26I	GTCTC	2 cut(s)	942, 1084
AlwI	GGATC	2 cut(s)	300, 1102
AlwNI	CAGNNNCTG	2 cut(s)	1082, 1097
Ama87I	CYCGRG	1 cut(s)	32
AoxI	GGCC	5 cut(s)	4, 355, 360, 491, 608
ApaI	GGGCCC	2 cut(s)	364, 495
ApeKI	GCWGC	2 cut(s)	691, 1027
ApoI	RAATTY	3 cut(s)	235, 776, 895
ArsI	GACNNNNNNTTYG	2 cut(s)	761, 793
Asp718I	GGTACC	1 cut(s)	1060
AspLEI	GCGC	1 cut(s)	87
AsuC2I	CCSGG	3 cut(s)	33, 34, 359
AsuHPI	GGTGA	2 cut(s)	581, 695
AvaI	CYCGRG	1 cut(s)	32
AvaII	GGWCC	4 cut(s)	157, 378, 563, 1138
BaeGI	GKGCMC	2 cut(s)	364, 495
BanI	GGYRCC	2 cut(s)	371, 1060
BanII	GRGCYC	3 cut(s)	364, 495, 633
BbsI	GAAGAC	4 cut(s)	6, 206, 284, 341
Bbv12I	GWGCWC	3 cut(s)	462, 520, 633
BbvI	GCAGC	2 cut(s)	703, 1014
BccI	CCATC	5 cut(s)	128, 632, 782, 989, 1160
BceAI	ACGGC	1 cut(s)	595
BcgI	CGANNNNNNTGC	2 cut(s)	285, 319
BciT130I	CCWGG	6 cut(s)	165, 316, 376, 416, 567, 1058
BclI	TGATCA	2 cut(s)	667, 936
BcnI	CCSGG	3 cut(s)	33, 34, 359
BcoDI	GTCTC	2 cut(s)	942, 1084
BfmI	CTRYAG	1 cut(s)	463
BfuAI	ACCTGC	1 cut(s)	847
BisI	GCNGC	3 cut(s)	692, 1028, 1031
BlpI	GCTNAGC	1 cut(s)	632
BlsI	GCNGC	3 cut(s)	693, 1029, 1032
Bme1390I	CCNGG	9 cut(s)	33, 34, 165, 316, 359, 376, 416, 567, 1058
Bme18I	GGWCC	4 cut(s)	157, 378, 563, 1138
BmeT110I	CYCGRG	1 cut(s)	32
BmiI	GGNNCC	8 cut(s)	38, 158, 362, 363, 373, 493, 1062, 1139
BmrFI	CCNGG	9 cut(s)	33, 34, 165, 316, 359, 376, 416, 567, 1058
BmrI	ACTGGG	2 cut(s)	294, 498
BmsI	GCATC	5 cut(s)	439, 733, 755, 868, 917
BmuI	ACTGGG	2 cut(s)	294, 498
BpiI	GAAGAC	4 cut(s)	6, 206, 284, 341
Bpu1102I	GCTNAGC	1 cut(s)	632
BpuEI	CTTGAG	1 cut(s)	898
BpuMI	CCSGG	3 cut(s)	33, 34, 359
BsaHI	GRCGYC	1 cut(s)	117
BsaJI	CCNNGG	5 cut(s)	32, 152, 163, 164, 315
BsaXI	ACNNNNNCTCC	2 cut(s)	107, 137
Bsc4I	CCNNNNNNNGG	5 cut(s)	267, 421, 500, 501, 1070
Bse1I	ACTGG	3 cut(s)	278, 289, 493
BseBI	CCWGG	6 cut(s)	165, 316, 376, 416, 567, 1058
BseDI	CCNNGG	5 cut(s)	32, 152, 163, 164, 315
BseGI	GGATG	4 cut(s)	333, 547, 908, 1000
BseLI	CCNNNNNNNGG	5 cut(s)	267, 421, 500, 501, 1070
BseMII	CTCAG	2 cut(s)	646, 1089
BseNI	ACTGG	3 cut(s)	278, 289, 493
BseRI	GAGGAG	2 cut(s)	545, 834
BseSI	GKGCMC	2 cut(s)	364, 495
BseXI	GCAGC	2 cut(s)	703, 1014
BshFI	GGCC	5 cut(s)	6, 357, 362, 493, 610
BshNI	GGYRCC	2 cut(s)	371, 1060
BsiHKAI	GWGCWC	3 cut(s)	462, 520, 633
BsiHKCI	CYCGRG	1 cut(s)	32
BsiSI	CCGG	4 cut(s)	33, 96, 358, 767
BslFI	GGGAC	2 cut(s)	170, 203
BslI	CCNNNNNNNGG	5 cut(s)	267, 421, 500, 501, 1070
BsmAI	GTCTC	2 cut(s)	942, 1084
BsmFI	GGGAC	2 cut(s)	170, 203
BsnI	GGCC	5 cut(s)	6, 357, 362, 493, 610
BsoBI	CYCGRG	1 cut(s)	32
Bsp120I	GGGCCC	2 cut(s)	360, 491
Bsp1286I	GDGCHC	5 cut(s)	364, 462, 495, 520, 633
Bsp143I	GATC	5 cut(s)	144, 292, 667, 936, 1094
Bsp1720I	GCTNAGC	1 cut(s)	632
BspACI	CCGC	6 cut(s)	109, 320, 403, 603, 1031, 1108
BspANI	GGCC	5 cut(s)	6, 357, 362, 493, 610
BspCNI	CTCAG	2 cut(s)	645, 1088
BspLI	GGNNCC	8 cut(s)	38, 158, 362, 363, 373, 493, 1062, 1139
BspMI	ACCTGC	1 cut(s)	847
BspPI	GGATC	2 cut(s)	300, 1102
BspT107I	GGYRCC	2 cut(s)	371, 1060
BsrI	ACTGG	3 cut(s)	278, 289, 493
BssECI	CCNNGG	5 cut(s)	32, 152, 163, 164, 315
BssMI	GATC	5 cut(s)	144, 292, 667, 936, 1094
BssNAI	GTATAC	2 cut(s)	615, 836
BssNI	GRCGYC	1 cut(s)	117
BssT1I	CCWWGG	1 cut(s)	152
Bst1107I	GTATAC	2 cut(s)	615, 836
Bst2UI	CCWGG	6 cut(s)	165, 316, 376, 416, 567, 1058
Bst4CI	ACNGT	1 cut(s)	353
Bst6I	CTCTTC	2 cut(s)	473, 567
BstACI	GRCGYC	1 cut(s)	117
BstC8I	GCNNGC	2 cut(s)	27, 931
BstDEI	CTNAG	2 cut(s)	632, 1075
BstF5I	GGATG	4 cut(s)	333, 547, 908, 1000
BstHHI	GCGC	1 cut(s)	87
BstKTI	GATC	5 cut(s)	147, 295, 670, 939, 1097
BstMAI	GTCTC	2 cut(s)	942, 1084
BstMBI	GATC	5 cut(s)	144, 292, 667, 936, 1094
BstMWI	GCNNNNNNNGC	1 cut(s)	848
BstNI	CCWGG	6 cut(s)	165, 316, 376, 416, 567, 1058
BstNSI	RCATGY	1 cut(s)	826
BstSCI	CCNGG	9 cut(s)	31, 32, 163, 314, 357, 374, 414, 565, 1056
BstSFI	CTRYAG	1 cut(s)	463
BstSLI	GKGCMC	2 cut(s)	364, 495
BstV1I	GCAGC	2 cut(s)	703, 1014
BstV2I	GAAGAC	4 cut(s)	6, 206, 284, 341
BstX2I	RGATCY	1 cut(s)	1094
BstXI	CCANNNNNNTGG	2 cut(s)	322, 482
BstYI	RGATCY	1 cut(s)	1094
BstZ17I	GTATAC	2 cut(s)	615, 836
BsuRI	GGCC	5 cut(s)	6, 357, 362, 493, 610
BtgZI	GCGATG	1 cut(s)	651
BtsCI	GGATG	4 cut(s)	333, 547, 908, 1000
BtsIMutI	CAGTG	1 cut(s)	358
BveI	ACCTGC	1 cut(s)	847
Cac8I	GCNNGC	2 cut(s)	27, 931
CaiI	CAGNNNCTG	2 cut(s)	1082, 1097
CfoI	GCGC	1 cut(s)	87
Cfr9I	CCCGGG	1 cut(s)	32
CseI	GACGC	1 cut(s)	125
CsiI	ACCWGGT	2 cut(s)	565, 1056
Csp6I	GTAC	6 cut(s)	73, 202, 271, 400, 486, 1061
CviAII	CATG	8 cut(s)	395, 731, 772, 823, 926, 934, 1105, 1126
CviQI	GTAC	6 cut(s)	73, 202, 271, 400, 486, 1061
DdeI	CTNAG	2 cut(s)	632, 1075
DpnI	GATC	5 cut(s)	146, 294, 669, 938, 1096
DpnII	GATC	5 cut(s)	144, 292, 667, 936, 1094
DraIII	CACNNNGTG	1 cut(s)	198
EaeI	YGGCCR	1 cut(s)	355
Eam1104I	CTCTTC	2 cut(s)	473, 567
EarI	CTCTTC	2 cut(s)	473, 567
Ecl136II	GAGCTC	1 cut(s)	631
Eco130I	CCWWGG	1 cut(s)	152
Eco24I	GRGCYC	3 cut(s)	364, 495, 633
Eco32I	GATATC	1 cut(s)	136
Eco47I	GGWCC	4 cut(s)	157, 378, 563, 1138
Eco53kI	GAGCTC	1 cut(s)	631
Eco57I	CTGAAG	4 cut(s)	101, 193, 639, 843
Eco88I	CYCGRG	1 cut(s)	32
EcoICRI	GAGCTC	1 cut(s)	631
EcoO109I	RGGNCCY	3 cut(s)	157, 361, 1138
EcoRI	GAATTC	1 cut(s)	895
EcoRII	CCWGG	6 cut(s)	163, 314, 374, 414, 565, 1056
EcoRV	GATATC	1 cut(s)	136
EcoT14I	CCWWGG	1 cut(s)	152
EcoT22I	ATGCAT	2 cut(s)	396, 748
EcoT38I	GRGCYC	3 cut(s)	364, 495, 633
ErhI	CCWWGG	1 cut(s)	152
FaeI	CATG	8 cut(s)	398, 734, 775, 826, 929, 937, 1108, 1129
FaqI	GGGAC	2 cut(s)	170, 203
FatI	CATG	8 cut(s)	394, 730, 771, 822, 925, 933, 1104, 1125
FauI	CCCGC	1 cut(s)	1101
FbaI	TGATCA	2 cut(s)	667, 936
FblI	GTMKAC	2 cut(s)	614, 835
Fnu4HI	GCNGC	3 cut(s)	692, 1028, 1031
FokI	GGATG	4 cut(s)	340, 554, 895, 1007
FriOI	GRGCYC	3 cut(s)	364, 495, 633
Fsp4HI	GCNGC	3 cut(s)	692, 1028, 1031
GlaI	GCGC	1 cut(s)	86
GluI	GCNGC	3 cut(s)	692, 1028, 1031
HaeIII	GGCC	5 cut(s)	6, 357, 362, 493, 610
HapII	CCGG	4 cut(s)	33, 96, 358, 767
HgaI	GACGC	1 cut(s)	125
HhaI	GCGC	1 cut(s)	87
Hin1I	GRCGYC	1 cut(s)	117
Hin1II	CATG	8 cut(s)	398, 734, 775, 826, 929, 937, 1108, 1129
Hin6I	GCGC	1 cut(s)	85
HinP1I	GCGC	1 cut(s)	85
HincII	GTYRAC	1 cut(s)	1006
HindII	GTYRAC	1 cut(s)	1006
HinfI	GANTC	3 cut(s)	42, 250, 817
HpaII	CCGG	4 cut(s)	33, 96, 358, 767
HphI	GGTGA	2 cut(s)	581, 695
Hpy166II	GTNNAC	3 cut(s)	615, 836, 1006
Hpy188I	TCNGA	5 cut(s)	41, 787, 862, 901, 941
Hpy188III	TCNNGA	3 cut(s)	218, 475, 1168
Hpy8I	GTNNAC	3 cut(s)	615, 836, 1006
Hpy99I	CGWCG	5 cut(s)	119, 131, 134, 244, 891
HpyAV	CCTTC	2 cut(s)	283, 614
HpyCH4III	ACNGT	1 cut(s)	353
HpyCH4V	TGCA	4 cut(s)	394, 746, 851, 881
HpyF10VI	GCNNNNNNNGC	1 cut(s)	848
HpyF3I	CTNAG	2 cut(s)	632, 1075
Hsp92I	GRCGYC	1 cut(s)	117
Hsp92II	CATG	8 cut(s)	398, 734, 775, 826, 929, 937, 1108, 1129
HspAI	GCGC	1 cut(s)	85
KpnI	GGTACC	1 cut(s)	1064
Ksp22I	TGATCA	2 cut(s)	667, 936
Kzo9I	GATC	5 cut(s)	144, 292, 667, 936, 1094
LmnI	GCTCC	5 cut(s)	34, 505, 523, 847, 1170
Lsp1109I	GCAGC	2 cut(s)	703, 1014
LweI	GCATC	5 cut(s)	439, 733, 755, 868, 917
MabI	ACCWGGT	2 cut(s)	565, 1056
MaeIII	GTNAC	2 cut(s)	818, 1042
MalI	GATC	5 cut(s)	146, 294, 669, 938, 1096
MboI	GATC	5 cut(s)	144, 292, 667, 936, 1094
MfeI	CAATTG	2 cut(s)	382, 657
MflI	RGATCY	1 cut(s)	1094
MhlI	GDGCHC	5 cut(s)	364, 462, 495, 520, 633
MluCI	AATT	7 cut(s)	235, 310, 382, 419, 657, 776, 895
MlyI	GAGTC	1 cut(s)	826
MmeI	TCCRAC	1 cut(s)	1077
Mph1103I	ATGCAT	2 cut(s)	396, 748
MspA1I	CMGCKG	2 cut(s)	603, 1027
MspI	CCGG	4 cut(s)	33, 96, 358, 767
MspR9I	CCNGG	9 cut(s)	33, 34, 165, 316, 359, 376, 416, 567, 1058
MunI	CAATTG	2 cut(s)	382, 657
MvaI	CCWGG	6 cut(s)	165, 316, 376, 416, 567, 1058
MwoI	GCNNNNNNNGC	1 cut(s)	848
NciI	CCSGG	3 cut(s)	33, 34, 359
NdeII	GATC	5 cut(s)	144, 292, 667, 936, 1094
NlaIII	CATG	8 cut(s)	398, 734, 775, 826, 929, 937, 1108, 1129
NlaIV	GGNNCC	8 cut(s)	38, 158, 362, 363, 373, 493, 1062, 1139
NmuCI	GTSAC	2 cut(s)	818, 1042
NsiI	ATGCAT	2 cut(s)	396, 748
NspI	RCATGY	1 cut(s)	826
PasI	CCCWGGG	1 cut(s)	164
PciI	ACATGT	1 cut(s)	822
PcsI	WCGNNNNNNNCGW	2 cut(s)	123, 245
PfeI	GAWTC	2 cut(s)	42, 250
PflMI	CCANNNNNTGG	2 cut(s)	421, 1070
PkrI	GCNGC	3 cut(s)	693, 1029, 1032
PleI	GAGTC	1 cut(s)	825
PpsI	GAGTC	1 cut(s)	825
PpuMI	RGGWCCY	2 cut(s)	157, 1138
PscI	ACATGT	1 cut(s)	822
Psp124BI	GAGCTC	1 cut(s)	633
Psp5II	RGGWCCY	2 cut(s)	157, 1138
Psp6I	CCWGG	6 cut(s)	163, 314, 374, 414, 565, 1056
PspGI	CCWGG	6 cut(s)	163, 314, 374, 414, 565, 1056
PspN4I	GGNNCC	8 cut(s)	38, 158, 362, 363, 373, 493, 1062, 1139
PspOMI	GGGCCC	2 cut(s)	360, 491
PspPPI	RGGWCCY	2 cut(s)	157, 1138
PstNI	CAGNNNCTG	2 cut(s)	1082, 1097
PsuI	RGATCY	1 cut(s)	1094
PvuII	CAGCTG	1 cut(s)	1027
RsaI	GTAC	6 cut(s)	74, 203, 272, 401, 487, 1062
RsaNI	GTAC	6 cut(s)	73, 202, 271, 400, 486, 1061
SacI	GAGCTC	1 cut(s)	633
SatI	GCNGC	3 cut(s)	692, 1028, 1031
Sau3AI	GATC	5 cut(s)	144, 292, 667, 936, 1094
SchI	GAGTC	1 cut(s)	826
ScrFI	CCNGG	9 cut(s)	33, 34, 165, 316, 359, 376, 416, 567, 1058
SduI	GDGCHC	5 cut(s)	364, 462, 495, 520, 633
SexAI	ACCWGGT	2 cut(s)	565, 1056
SfaNI	GCATC	5 cut(s)	439, 733, 755, 868, 917
SfcI	CTRYAG	1 cut(s)	463
SinI	GGWCC	4 cut(s)	157, 378, 563, 1138
SmaI	CCCGGG	1 cut(s)	34
SmlI	CTYRAG	1 cut(s)	913
SmoI	CTYRAG	1 cut(s)	913
Sse9I	AATT	7 cut(s)	235, 310, 382, 419, 657, 776, 895
SsiI	CCGC	6 cut(s)	109, 320, 403, 603, 1031, 1108
SstI	GAGCTC	1 cut(s)	633
StyD4I	CCNGG	9 cut(s)	31, 32, 163, 314, 357, 374, 414, 565, 1056
StyI	CCWWGG	1 cut(s)	152
TaaI	ACNGT	1 cut(s)	353
TaqI	TCGA	7 cut(s)	114, 132, 147, 173, 242, 295, 408
TasI	AATT	7 cut(s)	235, 310, 382, 419, 657, 776, 895
TauI	GCSGC	1 cut(s)	1033
TfiI	GAWTC	2 cut(s)	42, 250
TscAI	CASTG	1 cut(s)	358
TseFI	GTSAC	2 cut(s)	818, 1042
TseI	GCWGC	2 cut(s)	691, 1027
Tsp45I	GTSAC	2 cut(s)	818, 1042
TspDTI	ATGAA	9 cut(s)	72, 344, 558, 603, 741, 788, 793, 914, 1114
TspGWI	ACGGA	3 cut(s)	115, 209, 875
TspMI	CCCGGG	1 cut(s)	32
TspRI	CASTG	1 cut(s)	358
Van91I	CCANNNNNTGG	2 cut(s)	421, 1070
VpaK11BI	GGWCC	4 cut(s)	157, 378, 563, 1138
XapI	RAATTY	3 cut(s)	235, 776, 895
XceI	RCATGY	1 cut(s)	826
XmaI	CCCGGG	1 cut(s)	32
XmiI	GTMKAC	2 cut(s)	614, 835
Zsp2I	ATGCAT	2 cut(s)	396, 748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.