Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0004124

Physical Location & Seq

Genomic Coordinates Forward (+)

26716517 .. 26721851

Gene Structure 5335 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG141300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGGGCCGTCAGTCTTCGCAATCGCTCGCTCCCGGGTTCCGATTCCACCCCACCGATGAAGAACTTGTCTGGTACTACCTGAAGCGCAAGGTCGCCGGAAAATCTTTCCGCTTCGACGCCATCTCCGTCGTCGATATCTACAAGATCGAGCCTTGGGACCTCCCTGGGAAGTCGAAGCTGAAAAGCAGGGACACGGAGTGGTACTTCTTCAGTCTTCTGGACAAGAAGTATGGAAATTCGTCGAGGACGAATCGGGCTACCGAAAAAGGGTACTGGAAGACTACTGGGAAGGATCGACCCGTTTGCCATAATTCCAGGGCGGTGGGGATGAAGAAGACCCTTGTTTTCCACAGTGGCCGGGCCCCCAAAGGTGCCAGGACCAATTGGGTTATGCATGAGTACCGCCTCGATAACCAGGAATTGGAGAAAGCTGGAATAATAGAGAAAGATGCGTATGTGCTCTGTAGGATATTCCAGAAGAGTGGTACTGGGCCCAAGAATGGGGAGCAGTATGGTGCTCCATTTATTGAGGAGGAATGGGATGAAGAAGATGAGGTTTATGGACCTGGTGAAGAGGCTATTGCTAATGAAGTAGCAGTCAGCGGTGGGCCGTATACTGAAGGAAATGAGCTCAGCGATGGGGGATATGTTGAGGCAATTGACCTTGATCAGATTGACACAGGTGTTCCTGAAAGTGGTCCTCGTCCATTGAACTTCTATCATGGGGAGACAAGCAACTATATTGAGCAATCTGGGGACTTAGTTGAAGATGCTGCAAAGACTGCAGTAGGCGCTGGGGAAACTCTGGAATATTGCGAAGAGCAGAAGTACTTTGACTTACCAGAGCAGTATGAGATGGAAGCAAAGCCTGTCAAAGTTGAATACTTAACTTCGGACTACCATGACAACCAGAATTTCTTCAACTTACCAGAGTATTATGAGACAGAAACAAAAGAGGTCAAAGATGAATATGTTGAACCAAGCCATAATATGAATCCTGTGGATGTTAGCTACTCACTCAATGATCCATATTTAAATGCTACTGAAAACCCGCCATTCGGTGACGGGCAATTCTTAGAAACTAATGATCTTTCAATTCCAGCCAATCCAGTTGAGCCAAATTCTGCAGGCTTTGATATGCTTGATGAGTACCTTACATACTTTGATGCGGATGATGACATCTCTCAGTACATTGATTTTGATTCTTGTGGAATGCTGGGGAATGAAAATACTGTTCCTAGTGAACCTCTGGTTGAGCAGTCTGTTATGGGTGAAACGCAGCCACTATCCACAGGAAGCCAACATCTTGTAGAGGCACATGATGTCAATGATGCATCTTCATCAAAACAAAAGCCGGACATGAAATTTGTATCAGGTATTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0007275 GO:0007568 GO:0008150 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009819 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0010035 GO:0010150 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

461

Amino Acids

51.99

Weight (kDa)

4.46

Isoelectric Point (pI)

37.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	11 - 136	9.1e-48	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10500 AT3G10500 AT5G04410
fragaria_vesca	FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501
malus_domestica	MD02G1243200.v1.1 MD02G1243600.v1.1 MD02G1243800.v1.1 MD07G1073200.v1.1
prunus_persica	Prupe.2G091500_v2.0.a1
pyrus_communis	pycom02g20980 pycom07g05650 pycom07g05660 pycom07g05670
rosa_chinensis	RchiOBHm_Chr1g0334901
rosa_laevigata	RLG00000029411
rosa_multiflora	Rmu_co8457141.1_g000001 Rmu_sc0000574.1_g000049
rosa_roxburghii	Rroxscaffold_1G00037320 Rroxscaffold_4G00316370
rosa_rugosa	Rorug01G0117800
rosa_samantha	Rh1AG141300 Rh1BG108800 Rh1CG133200 Rh1DG145700 Rh5CG119700 Rh5DG106800
rosa_wichuraiana	Rw1G011710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	371
AccB7I	CCANNNNNTGG	1 cut(s)	421
AccI	GTMKAC	1 cut(s)	614
AciI	CCGC	6 cut(s)	109, 320, 403, 603, 1052, 1169
AclWI	GGATC	2 cut(s)	300, 1019
AcoI	YGGCCR	1 cut(s)	355
AcsI	RAATTY	4 cut(s)	235, 913, 1120, 1364
AcuI	CTGAAG	3 cut(s)	101, 193, 639
AcyI	GRCGYC	1 cut(s)	117
AdeI	CACNNNGTG	1 cut(s)	198
AfaI	GTAC	8 cut(s)	74, 203, 272, 401, 487, 830, 1151, 1190
AfiI	CCNNNNNNNGG	6 cut(s)	267, 421, 500, 501, 695, 1058
AgsI	TTSAA	6 cut(s)	712, 767, 881, 922, 977, 1095
AjnI	CCWGG	5 cut(s)	163, 314, 374, 414, 565
AluBI	AGCT	4 cut(s)	178, 431, 631, 1011
AluI	AGCT	4 cut(s)	178, 431, 631, 1011
Alw21I	GWGCWC	3 cut(s)	462, 520, 633
Alw26I	GTCTC	2 cut(s)	722, 935
AlwI	GGATC	2 cut(s)	300, 1019
Ama87I	CYCGRG	1 cut(s)	32
AoxI	GGCC	5 cut(s)	4, 355, 360, 491, 608
ApaI	GGGCCC	2 cut(s)	364, 495
ApeKI	GCWGC	2 cut(s)	773, 1279
ApoI	RAATTY	4 cut(s)	235, 913, 1120, 1364
ArsI	GACNNNNNNTTYG	2 cut(s)	1349, 1381
Asp700I	GAANNNNTTC	1 cut(s)	917
AspLEI	GCGC	2 cut(s)	87, 794
AsuC2I	CCSGG	3 cut(s)	33, 34, 359
AsuHPI	GGTGA	3 cut(s)	581, 1073, 1283
AvaI	CYCGRG	1 cut(s)	32
AvaII	GGWCC	4 cut(s)	157, 378, 563, 698
BaeGI	GKGCMC	2 cut(s)	364, 495
BanI	GGYRCC	1 cut(s)	371
BanII	GRGCYC	3 cut(s)	364, 495, 633
BbsI	GAAGAC	4 cut(s)	6, 206, 284, 341
Bbv12I	GWGCWC	3 cut(s)	462, 520, 633
BbvI	GCAGC	2 cut(s)	760, 1291
BccI	CCATC	3 cut(s)	128, 632, 850
BceAI	ACGGC	1 cut(s)	595
BcgI	CGANNNNNNTGC	2 cut(s)	285, 319
BciT130I	CCWGG	5 cut(s)	165, 316, 376, 416, 567
BclI	TGATCA	1 cut(s)	667
BcnI	CCSGG	3 cut(s)	33, 34, 359
BcoDI	GTCTC	2 cut(s)	722, 935
BfaI	CTAG	1 cut(s)	1239
BfmI	CTRYAG	3 cut(s)	463, 783, 1125
BfoI	RGCGCY	1 cut(s)	795
BisI	GCNGC	2 cut(s)	774, 1280
BlpI	GCTNAGC	1 cut(s)	632
BlsI	GCNGC	2 cut(s)	775, 1281
BmcAI	AGTACT	1 cut(s)	830
Bme1390I	CCNGG	8 cut(s)	33, 34, 165, 316, 359, 376, 416, 567
Bme18I	GGWCC	4 cut(s)	157, 378, 563, 698
BmeT110I	CYCGRG	1 cut(s)	32
BmiI	GGNNCC	6 cut(s)	38, 158, 362, 363, 373, 493
BmrFI	CCNGG	8 cut(s)	33, 34, 165, 316, 359, 376, 416, 567
BmrI	ACTGGG	2 cut(s)	294, 498
BmsI	GCATC	5 cut(s)	439, 760, 1156, 1321, 1343
BmuI	ACTGGG	2 cut(s)	294, 498
BpiI	GAAGAC	4 cut(s)	6, 206, 284, 341
Bpu1102I	GCTNAGC	1 cut(s)	632
BpuMI	CCSGG	3 cut(s)	33, 34, 359
BsaHI	GRCGYC	1 cut(s)	117
BsaJI	CCNNGG	5 cut(s)	32, 152, 163, 164, 315
BsaXI	ACNNNNNCTCC	2 cut(s)	107, 137
Bsc4I	CCNNNNNNNGG	6 cut(s)	267, 421, 500, 501, 695, 1058
Bse1I	ACTGG	4 cut(s)	278, 289, 493, 1109
BseBI	CCWGG	5 cut(s)	165, 316, 376, 416, 567
BseDI	CCNNGG	5 cut(s)	32, 152, 163, 164, 315
BseGI	GGATG	4 cut(s)	333, 547, 1009, 1177
BseLI	CCNNNNNNNGG	6 cut(s)	267, 421, 500, 501, 695, 1058
BseMII	CTCAG	2 cut(s)	646, 1199
BseNI	ACTGG	4 cut(s)	278, 289, 493, 1109
BseRI	GAGGAG	1 cut(s)	545
BseSI	GKGCMC	2 cut(s)	364, 495
BseXI	GCAGC	2 cut(s)	760, 1291
BseYI	CCCAGC	2 cut(s)	794, 1216
BshFI	GGCC	5 cut(s)	6, 357, 362, 493, 610
BshNI	GGYRCC	1 cut(s)	371
BsiHKAI	GWGCWC	3 cut(s)	462, 520, 633
BsiHKCI	CYCGRG	1 cut(s)	32
BsiSI	CCGG	4 cut(s)	33, 96, 358, 1355
BslFI	GGGAC	3 cut(s)	170, 203, 770
BslI	CCNNNNNNNGG	6 cut(s)	267, 421, 500, 501, 695, 1058
BsmAI	GTCTC	2 cut(s)	722, 935
BsmFI	GGGAC	3 cut(s)	170, 203, 770
BsmI	GAATGC	1 cut(s)	1218
BsnI	GGCC	5 cut(s)	6, 357, 362, 493, 610
BsoBI	CYCGRG	1 cut(s)	32
Bsp120I	GGGCCC	2 cut(s)	360, 491
Bsp1286I	GDGCHC	5 cut(s)	364, 462, 495, 520, 633
Bsp143I	GATC	5 cut(s)	144, 292, 667, 1024, 1087
Bsp1720I	GCTNAGC	1 cut(s)	632
BspACI	CCGC	6 cut(s)	109, 320, 403, 603, 1052, 1169
BspANI	GGCC	5 cut(s)	6, 357, 362, 493, 610
BspCNI	CTCAG	2 cut(s)	645, 1198
BspLI	GGNNCC	6 cut(s)	38, 158, 362, 363, 373, 493
BspMAI	CTGCAG	2 cut(s)	787, 1129
BspPI	GGATC	2 cut(s)	300, 1019
BspQI	GCTCTTC	1 cut(s)	813
BspT107I	GGYRCC	1 cut(s)	371
BsrI	ACTGG	4 cut(s)	278, 289, 493, 1109
BssECI	CCNNGG	5 cut(s)	32, 152, 163, 164, 315
BssMI	GATC	5 cut(s)	144, 292, 667, 1024, 1087
BssNAI	GTATAC	1 cut(s)	615
BssNI	GRCGYC	1 cut(s)	117
BssT1I	CCWWGG	1 cut(s)	152
Bst1107I	GTATAC	1 cut(s)	615
Bst2UI	CCWGG	5 cut(s)	165, 316, 376, 416, 567
Bst4CI	ACNGT	2 cut(s)	353, 1234
Bst6I	CTCTTC	3 cut(s)	473, 567, 813
BstACI	GRCGYC	1 cut(s)	117
BstAPI	GCANNNNNTGC	1 cut(s)	782
BstC8I	GCNNGC	2 cut(s)	27, 1129
BstDEI	CTNAG	4 cut(s)	632, 760, 1075, 1185
BstF5I	GGATG	4 cut(s)	333, 547, 1009, 1177
BstH2I	RGCGCY	1 cut(s)	795
BstHHI	GCGC	2 cut(s)	87, 794
BstKTI	GATC	5 cut(s)	147, 295, 670, 1027, 1090
BstMAI	GTCTC	2 cut(s)	722, 935
BstMBI	GATC	5 cut(s)	144, 292, 667, 1024, 1087
BstMWI	GCNNNNNNNGC	2 cut(s)	782, 791
BstNI	CCWGG	5 cut(s)	165, 316, 376, 416, 567
BstSCI	CCNGG	8 cut(s)	31, 32, 163, 314, 357, 374, 414, 565
BstSFI	CTRYAG	3 cut(s)	463, 783, 1125
BstSLI	GKGCMC	2 cut(s)	364, 495
BstV1I	GCAGC	2 cut(s)	760, 1291
BstV2I	GAAGAC	4 cut(s)	6, 206, 284, 341
BstXI	CCANNNNNNTGG	2 cut(s)	322, 482
BstZ17I	GTATAC	1 cut(s)	615
BsuRI	GGCC	5 cut(s)	6, 357, 362, 493, 610
BtgZI	GCGATG	1 cut(s)	651
BtsCI	GGATG	4 cut(s)	333, 547, 1009, 1177
BtsIMutI	CAGTG	1 cut(s)	358
Cac8I	GCNNGC	2 cut(s)	27, 1129
CfoI	GCGC	2 cut(s)	87, 794
Cfr9I	CCCGGG	1 cut(s)	32
CseI	GACGC	1 cut(s)	125
CsiI	ACCWGGT	1 cut(s)	565
Csp6I	GTAC	8 cut(s)	73, 202, 271, 400, 486, 829, 1150, 1189
CviAII	CATG	5 cut(s)	395, 722, 902, 1319, 1360
CviQI	GTAC	8 cut(s)	73, 202, 271, 400, 486, 829, 1150, 1189
DdeI	CTNAG	4 cut(s)	632, 760, 1075, 1185
DpnI	GATC	5 cut(s)	146, 294, 669, 1026, 1089
DpnII	GATC	5 cut(s)	144, 292, 667, 1024, 1087
DraI	TTTAAA	1 cut(s)	1035
DraIII	CACNNNGTG	1 cut(s)	198
EaeI	YGGCCR	1 cut(s)	355
Eam1104I	CTCTTC	3 cut(s)	473, 567, 813
EarI	CTCTTC	3 cut(s)	473, 567, 813
Ecl136II	GAGCTC	1 cut(s)	631
Eco130I	CCWWGG	1 cut(s)	152
Eco24I	GRGCYC	3 cut(s)	364, 495, 633
Eco32I	GATATC	1 cut(s)	136
Eco47I	GGWCC	4 cut(s)	157, 378, 563, 698
Eco53kI	GAGCTC	1 cut(s)	631
Eco57I	CTGAAG	3 cut(s)	101, 193, 639
Eco88I	CYCGRG	1 cut(s)	32
EcoICRI	GAGCTC	1 cut(s)	631
EcoO109I	RGGNCCY	2 cut(s)	157, 361
EcoRII	CCWGG	5 cut(s)	163, 314, 374, 414, 565
EcoRV	GATATC	1 cut(s)	136
EcoT14I	CCWWGG	1 cut(s)	152
EcoT22I	ATGCAT	2 cut(s)	396, 1336
EcoT38I	GRGCYC	3 cut(s)	364, 495, 633
ErhI	CCWWGG	1 cut(s)	152
FaeI	CATG	5 cut(s)	398, 725, 905, 1322, 1363
FaqI	GGGAC	3 cut(s)	170, 203, 770
FatI	CATG	5 cut(s)	394, 721, 901, 1318, 1359
FauI	CCCGC	1 cut(s)	1059
FbaI	TGATCA	1 cut(s)	667
FblI	GTMKAC	1 cut(s)	614
Fnu4HI	GCNGC	2 cut(s)	774, 1280
FokI	GGATG	4 cut(s)	340, 554, 1016, 1184
FriOI	GRGCYC	3 cut(s)	364, 495, 633
Fsp4HI	GCNGC	2 cut(s)	774, 1280
FspBI	CTAG	1 cut(s)	1239
GlaI	GCGC	2 cut(s)	86, 793
GluI	GCNGC	2 cut(s)	774, 1280
GsaI	CCCAGC	2 cut(s)	798, 1220
HaeII	RGCGCY	1 cut(s)	795
HaeIII	GGCC	5 cut(s)	6, 357, 362, 493, 610
HapII	CCGG	4 cut(s)	33, 96, 358, 1355
HgaI	GACGC	1 cut(s)	125
HhaI	GCGC	2 cut(s)	87, 794
Hin1I	GRCGYC	1 cut(s)	117
Hin1II	CATG	5 cut(s)	398, 725, 905, 1322, 1363
Hin6I	GCGC	2 cut(s)	85, 792
HinP1I	GCGC	2 cut(s)	85, 792
HinfI	GANTC	4 cut(s)	42, 250, 994, 1202
HpaII	CCGG	4 cut(s)	33, 96, 358, 1355
HphI	GGTGA	3 cut(s)	581, 1073, 1283
Hpy166II	GTNNAC	2 cut(s)	615, 1244
Hpy188I	TCNGA	3 cut(s)	41, 672, 895
Hpy188III	TCNNGA	4 cut(s)	218, 475, 689, 806
Hpy8I	GTNNAC	2 cut(s)	615, 1244
Hpy99I	CGWCG	4 cut(s)	119, 131, 134, 244
HpyAV	CCTTC	2 cut(s)	283, 614
HpyCH4III	ACNGT	2 cut(s)	353, 1234
HpyCH4V	TGCA	5 cut(s)	394, 776, 785, 1127, 1334
HpyF10VI	GCNNNNNNNGC	2 cut(s)	782, 791
HpyF3I	CTNAG	4 cut(s)	632, 760, 1075, 1185
Hsp92I	GRCGYC	1 cut(s)	117
Hsp92II	CATG	5 cut(s)	398, 725, 905, 1322, 1363
HspAI	GCGC	2 cut(s)	85, 792
Ksp22I	TGATCA	1 cut(s)	667
Kzo9I	GATC	5 cut(s)	144, 292, 667, 1024, 1087
LguI	GCTCTTC	1 cut(s)	813
LmnI	GCTCC	3 cut(s)	34, 505, 523
Lsp1109I	GCAGC	2 cut(s)	760, 1291
LweI	GCATC	5 cut(s)	439, 760, 1156, 1321, 1343
MabI	ACCWGGT	1 cut(s)	565
MaeI	CTAG	1 cut(s)	1239
MaeIII	GTNAC	1 cut(s)	1061
MalI	GATC	5 cut(s)	146, 294, 669, 1026, 1089
MboI	GATC	5 cut(s)	144, 292, 667, 1024, 1087
MfeI	CAATTG	2 cut(s)	382, 657
MhlI	GDGCHC	5 cut(s)	364, 462, 495, 520, 633
Mph1103I	ATGCAT	2 cut(s)	396, 1336
MroXI	GAANNNNTTC	1 cut(s)	917
MseI	TTAA	2 cut(s)	887, 1034
MspA1I	CMGCKG	1 cut(s)	603
MspI	CCGG	4 cut(s)	33, 96, 358, 1355
MspR9I	CCNGG	8 cut(s)	33, 34, 165, 316, 359, 376, 416, 567
MunI	CAATTG	2 cut(s)	382, 657
Mva1269I	GAATGC	1 cut(s)	1218
MvaI	CCWGG	5 cut(s)	165, 316, 376, 416, 567
MwoI	GCNNNNNNNGC	2 cut(s)	782, 791
NciI	CCSGG	3 cut(s)	33, 34, 359
NdeII	GATC	5 cut(s)	144, 292, 667, 1024, 1087
NlaIII	CATG	5 cut(s)	398, 725, 905, 1322, 1363
NlaIV	GGNNCC	6 cut(s)	38, 158, 362, 363, 373, 493
NmuCI	GTSAC	1 cut(s)	1061
NsiI	ATGCAT	2 cut(s)	396, 1336
PasI	CCCWGGG	1 cut(s)	164
PciSI	GCTCTTC	1 cut(s)	813
PcsI	WCGNNNNNNNCGW	2 cut(s)	123, 245
PctI	GAATGC	1 cut(s)	1218
PdmI	GAANNNNTTC	1 cut(s)	917
PfeI	GAWTC	4 cut(s)	42, 250, 994, 1202
PflMI	CCANNNNNTGG	1 cut(s)	421
PkrI	GCNGC	2 cut(s)	775, 1281
PpuMI	RGGWCCY	1 cut(s)	157
Psp124BI	GAGCTC	1 cut(s)	633
Psp5II	RGGWCCY	1 cut(s)	157
Psp6I	CCWGG	5 cut(s)	163, 314, 374, 414, 565
PspFI	CCCAGC	2 cut(s)	794, 1216
PspGI	CCWGG	5 cut(s)	163, 314, 374, 414, 565
PspN4I	GGNNCC	6 cut(s)	38, 158, 362, 363, 373, 493
PspOMI	GGGCCC	2 cut(s)	360, 491
PspPPI	RGGWCCY	1 cut(s)	157
PstI	CTGCAG	2 cut(s)	787, 1129
RsaI	GTAC	8 cut(s)	74, 203, 272, 401, 487, 830, 1151, 1190
RsaNI	GTAC	8 cut(s)	73, 202, 271, 400, 486, 829, 1150, 1189
SacI	GAGCTC	1 cut(s)	633
SapI	GCTCTTC	1 cut(s)	813
SaqAI	TTAA	2 cut(s)	887, 1034
SatI	GCNGC	2 cut(s)	774, 1280
Sau3AI	GATC	5 cut(s)	144, 292, 667, 1024, 1087
ScaI	AGTACT	1 cut(s)	830
ScrFI	CCNGG	8 cut(s)	33, 34, 165, 316, 359, 376, 416, 567
SduI	GDGCHC	5 cut(s)	364, 462, 495, 520, 633
SexAI	ACCWGGT	1 cut(s)	565
SfaNI	GCATC	5 cut(s)	439, 760, 1156, 1321, 1343
SfcI	CTRYAG	3 cut(s)	463, 783, 1125
SinI	GGWCC	4 cut(s)	157, 378, 563, 698
SmaI	CCCGGG	1 cut(s)	34
SmiI	ATTTAAAT	1 cut(s)	1035
SsiI	CCGC	6 cut(s)	109, 320, 403, 603, 1052, 1169
SspI	AATATT	1 cut(s)	812
SspMI	CTAG	1 cut(s)	1239
SstI	GAGCTC	1 cut(s)	633
StyD4I	CCNGG	8 cut(s)	31, 32, 163, 314, 357, 374, 414, 565
StyI	CCWWGG	1 cut(s)	152
SwaI	ATTTAAAT	1 cut(s)	1035
TaaI	ACNGT	2 cut(s)	353, 1234
TaqI	TCGA	7 cut(s)	114, 132, 147, 173, 242, 295, 408
TatI	WGTACW	2 cut(s)	828, 1188
TfiI	GAWTC	4 cut(s)	42, 250, 994, 1202
Tru1I	TTAA	2 cut(s)	887, 1034
Tru9I	TTAA	2 cut(s)	887, 1034
TscAI	CASTG	1 cut(s)	358
TseFI	GTSAC	1 cut(s)	1061
TseI	GCWGC	2 cut(s)	773, 1279
Tsp45I	GTSAC	1 cut(s)	1061
TspDTI	ATGAA	9 cut(s)	72, 344, 558, 603, 981, 1007, 1239, 1329, 1376
TspGWI	ACGGA	2 cut(s)	115, 209
TspMI	CCCGGG	1 cut(s)	32
TspRI	CASTG	1 cut(s)	358
Van91I	CCANNNNNTGG	1 cut(s)	421
VpaK11BI	GGWCC	4 cut(s)	157, 378, 563, 698
XapI	RAATTY	4 cut(s)	235, 913, 1120, 1364
XmaI	CCCGGG	1 cut(s)	32
XmiI	GTMKAC	1 cut(s)	614
XmnI	GAANNNNTTC	1 cut(s)	917
XspI	CTAG	1 cut(s)	1239
ZrmI	AGTACT	1 cut(s)	830
Zsp2I	ATGCAT	2 cut(s)	396, 1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.