Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0004124

Physical Location & Seq

Genomic Coordinates Forward (+)

18783760 .. 18789018

Gene Structure 5259 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG108800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGAAGAAGACCCTTGTTTTCCACAGTGGCCGAGCCCCCAAAGGTGCCAGGACCAATTGGGTTATGCATGAGTACCGCCTCGATAACCAGGAATTGGAGAAAGCTGGAATAATAGAGAAAGATGCATATGTGCTCTGTAGGATATTCCAGAAGAGTGGTACCGGGCCCAAGAATGGGGAGCAGTATGGTGCTCCATTTCTCGAGGAGGAATGGGATGAAGAAGATGAGGTTTATGGACCTGGTGAAGAGGCTATTGCTAATGAAGTAGCAGTCAGCGGTGGGCCGTATACTGAAGCGAATGAGCTCAGCGATGGGGGATATGTTGAGGCAATTGACCTTGATCAGAATATTGACACAGGTGTTCCTGAAAGTGGTCCTCGTCCATTGAACTTCTATCATGGGGAGACAAGCAACTATATTGAGCAATCTGGGGATTTTGTTGAAGATGCTGCAAAGACTGCAGTAGGCGCTGGGGAAACTCTGGAATATTGCGAAGAGCAGAAGTACTTCGACTTACCAGAGCAGTATGAGATGGGTGCAAAGCCTGTCAAAGTTGAATACTTAACTTCGGAATACGATGACAACCAGAACTTCTTCAACTTACCAGAGTATTATGAGACAGAAACAAAAGCGGTCAAAGATGAATATGTTGAACCAAGCCATAATATGAATCCTGTGGATGTCAGCTACTCACTCAATGATCCATATTTAAATGCTACTGAAAACCCGCCATTTGGTGACGGGCAATTCTTAGAAACTAATGATCTTTCAATTCCAGCCAATCCAGTTGAGCCAAATTCTGCCGGCTTTGATATGCTTGATGAGTACCTTACATACTTTGATGCGGATGATGACATCTCTCAGTACATTGATTTTGATTCTTGTGGAATGCTGGGGAATGAAAATACTGTTCCTAGTGAACCTCTGGTTGAGCAGTCTGTTATGGGTGAAACTCAGCCACTATCCACTGGAAGCCAACATCTTGTAGAGGCACATGATGCCAATGATGCATCTTCATCAAAACAAAAGCCAGATGTGAAATTTGGATCAGATGGCAAGTTTCCATTCATCACAAAGGCGAGTCAGATGTTGGGCAGTATACCTGCTCCTCCTGCATTTGCTTCAGAGTTCCCTCCTAAAGATGCAATCCTTCGGTTGAATTCTGAAGTAGCATCCTCAAGTTCAGTTCATGCTGGCATGATCAGAATAAGAGACATAACTTCAAGCGACAACAGGGTGGAGTGGTCTATTGGTAAGGACGGGGTTGTCAACCTTGTGTTTTCTGTTCAGCTGCCGCATAGTGATGTCACTTCTTCCAACCTGGTACCAATGGGCGGCTCAGTCTCTGGCAAGACGGGATCTGTGGTCATGCGGGGCTGGTTTTTGTTCATGTTCTTCTGGGTCCTATTTATTTCCATTAGTTTCAAAATCGGGAGCTATATATATGCCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0007275 GO:0007568 GO:0008150 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009819 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0010035 GO:0010150 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

484

Amino Acids

53.49

Weight (kDa)

4.29

Isoelectric Point (pI)

36.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	1 - 27	8.5e-06	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10500 AT3G10500 AT5G04410
fragaria_vesca	FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501
malus_domestica	MD02G1243200.v1.1 MD02G1243600.v1.1 MD02G1243800.v1.1 MD07G1073200.v1.1
prunus_persica	Prupe.2G091500_v2.0.a1
pyrus_communis	pycom02g20980 pycom07g05650 pycom07g05660 pycom07g05670
rosa_chinensis	RchiOBHm_Chr1g0334901
rosa_laevigata	RLG00000029411
rosa_multiflora	Rmu_co8457141.1_g000001 Rmu_sc0000574.1_g000049
rosa_roxburghii	Rroxscaffold_1G00037320 Rroxscaffold_4G00316370
rosa_rugosa	Rorug01G0117800
rosa_samantha	Rh1AG141300 Rh1BG108800 Rh1CG133200 Rh1DG145700 Rh5CG119700 Rh5DG106800
rosa_wichuraiana	Rw1G011710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1265
Acc36I	ACCTGC	1 cut(s)	1111
Acc65I	GGTACC	2 cut(s)	158, 1324
AccB1I	GGYRCC	3 cut(s)	44, 158, 1324
AccB7I	CCANNNNNTGG	1 cut(s)	94
AccI	GTMKAC	2 cut(s)	287, 1099
AciI	CCGC	8 cut(s)	76, 276, 632, 728, 845, 1295, 1335, 1372
AclWI	GGATC	3 cut(s)	695, 1054, 1366
AcoI	YGGCCR	1 cut(s)	28
AcsI	RAATTY	3 cut(s)	796, 1040, 1159
AcuI	CTGAAG	3 cut(s)	312, 1107, 1185
AfaI	GTAC	6 cut(s)	74, 160, 506, 827, 866, 1326
AfiI	CCNNNNNNNGG	6 cut(s)	94, 173, 174, 371, 734, 1334
AgsI	TTSAA	9 cut(s)	388, 443, 557, 598, 653, 771, 1159, 1224, 1426
AjnI	CCWGG	4 cut(s)	47, 87, 238, 1320
AluBI	AGCT	5 cut(s)	104, 304, 687, 1291, 1437
AluI	AGCT	5 cut(s)	104, 304, 687, 1291, 1437
Alw21I	GWGCWC	3 cut(s)	135, 193, 306
Alw26I	GTCTC	4 cut(s)	398, 611, 1206, 1348
AlwI	GGATC	3 cut(s)	695, 1054, 1366
AlwNI	CAGNNNCTG	1 cut(s)	1346
Ama87I	CYCGRG	1 cut(s)	200
AoxI	GGCC	3 cut(s)	28, 164, 281
ApaI	GGGCCC	1 cut(s)	168
ApeKI	GCWGC	2 cut(s)	449, 1291
ApoI	RAATTY	3 cut(s)	796, 1040, 1159
Asp700I	GAANNNNTTC	2 cut(s)	506, 593
Asp718I	GGTACC	2 cut(s)	158, 1324
AspLEI	GCGC	1 cut(s)	470
AspS9I	GGNCC	7 cut(s)	51, 164, 165, 236, 281, 374, 1402
AsuC2I	CCSGG	1 cut(s)	163
AsuHPI	GGTGA	3 cut(s)	254, 749, 959
AvaI	CYCGRG	1 cut(s)	200
AvaII	GGWCC	4 cut(s)	51, 236, 374, 1402
BaeGI	GKGCMC	1 cut(s)	168
BanI	GGYRCC	3 cut(s)	44, 158, 1324
BanII	GRGCYC	3 cut(s)	37, 168, 306
BbsI	GAAGAC	1 cut(s)	14
Bbv12I	GWGCWC	3 cut(s)	135, 193, 306
BbvI	GCAGC	2 cut(s)	436, 1278
BccI	CCATC	3 cut(s)	305, 526, 1046
BceAI	ACGGC	1 cut(s)	268
BciT130I	CCWGG	4 cut(s)	49, 89, 240, 1322
BclI	TGATCA	2 cut(s)	340, 1200
BcnI	CCSGG	1 cut(s)	163
BcoDI	GTCTC	4 cut(s)	398, 611, 1206, 1348
BfaI	CTAG	1 cut(s)	915
BfmI	CTRYAG	2 cut(s)	136, 459
BfoI	RGCGCY	1 cut(s)	471
BfuAI	ACCTGC	1 cut(s)	1111
BisI	GCNGC	4 cut(s)	450, 1292, 1295, 1336
BlpI	GCTNAGC	1 cut(s)	305
BlsI	GCNGC	4 cut(s)	451, 1293, 1296, 1337
BmcAI	AGTACT	1 cut(s)	506
Bme1390I	CCNGG	5 cut(s)	49, 89, 163, 240, 1322
Bme18I	GGWCC	4 cut(s)	51, 236, 374, 1402
BmeT110I	CYCGRG	1 cut(s)	200
BmgT120I	GGNCC	7 cut(s)	51, 164, 165, 236, 281, 374, 1402
BmiI	GGNNCC	5 cut(s)	46, 160, 166, 1326, 1403
BmrFI	CCNGG	5 cut(s)	49, 89, 163, 240, 1322
BmsI	GCATC	8 cut(s)	112, 436, 832, 988, 997, 1019, 1132, 1181
BpiI	GAAGAC	1 cut(s)	14
Bpu1102I	GCTNAGC	1 cut(s)	305
BpuEI	CTTGAG	1 cut(s)	1162
BpuMI	CCSGG	1 cut(s)	163
Bsc4I	CCNNNNNNNGG	6 cut(s)	94, 173, 174, 371, 734, 1334
Bse118I	RCCGGY	1 cut(s)	803
Bse1I	ACTGG	2 cut(s)	785, 973
BseBI	CCWGG	4 cut(s)	49, 89, 240, 1322
BseGI	GGATG	4 cut(s)	220, 685, 853, 1172
BseLI	CCNNNNNNNGG	6 cut(s)	94, 173, 174, 371, 734, 1334
BseMII	CTCAG	4 cut(s)	319, 875, 968, 1353
BseNI	ACTGG	2 cut(s)	785, 973
BseRI	GAGGAG	2 cut(s)	218, 1098
BseSI	GKGCMC	1 cut(s)	168
BseXI	GCAGC	2 cut(s)	436, 1278
BseYI	CCCAGC	2 cut(s)	470, 892
BshFI	GGCC	3 cut(s)	30, 166, 283
BshNI	GGYRCC	3 cut(s)	44, 158, 1324
BsiHKAI	GWGCWC	3 cut(s)	135, 193, 306
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	2 cut(s)	162, 804
BslI	CCNNNNNNNGG	6 cut(s)	94, 173, 174, 371, 734, 1334
BsmAI	GTCTC	4 cut(s)	398, 611, 1206, 1348
BsmI	GAATGC	1 cut(s)	894
BsnI	GGCC	3 cut(s)	30, 166, 283
BsoBI	CYCGRG	1 cut(s)	200
Bsp120I	GGGCCC	1 cut(s)	164
Bsp1286I	GDGCHC	5 cut(s)	37, 135, 168, 193, 306
Bsp143I	GATC	6 cut(s)	340, 700, 763, 1046, 1200, 1358
Bsp1720I	GCTNAGC	1 cut(s)	305
BspACI	CCGC	8 cut(s)	76, 276, 632, 728, 845, 1295, 1335, 1372
BspANI	GGCC	3 cut(s)	30, 166, 283
BspCNI	CTCAG	4 cut(s)	318, 874, 967, 1352
BspLI	GGNNCC	5 cut(s)	46, 160, 166, 1326, 1403
BspMAI	CTGCAG	1 cut(s)	463
BspMI	ACCTGC	1 cut(s)	1111
BspPI	GGATC	3 cut(s)	695, 1054, 1366
BspQI	GCTCTTC	1 cut(s)	489
BspT107I	GGYRCC	3 cut(s)	44, 158, 1324
BsrFI	RCCGGY	1 cut(s)	803
BsrI	ACTGG	2 cut(s)	785, 973
BssAI	RCCGGY	1 cut(s)	803
BssMI	GATC	6 cut(s)	340, 700, 763, 1046, 1200, 1358
BssNAI	GTATAC	2 cut(s)	288, 1100
Bst1107I	GTATAC	2 cut(s)	288, 1100
Bst2UI	CCWGG	4 cut(s)	49, 89, 240, 1322
Bst4CI	ACNGT	2 cut(s)	26, 910
Bst6I	CTCTTC	3 cut(s)	146, 240, 489
BstAPI	GCANNNNNTGC	2 cut(s)	458, 998
BstC8I	GCNNGC	2 cut(s)	805, 1195
BstDEI	CTNAG	5 cut(s)	305, 751, 861, 954, 1339
BstF5I	GGATG	4 cut(s)	220, 685, 853, 1172
BstH2I	RGCGCY	1 cut(s)	471
BstHHI	GCGC	1 cut(s)	470
BstKTI	GATC	6 cut(s)	343, 703, 766, 1049, 1203, 1361
BstMAI	GTCTC	4 cut(s)	398, 611, 1206, 1348
BstMBI	GATC	6 cut(s)	340, 700, 763, 1046, 1200, 1358
BstMWI	GCNNNNNNNGC	5 cut(s)	458, 467, 998, 1007, 1112
BstNI	CCWGG	4 cut(s)	49, 89, 240, 1322
BstSCI	CCNGG	5 cut(s)	47, 87, 161, 238, 1320
BstSFI	CTRYAG	2 cut(s)	136, 459
BstSLI	GKGCMC	1 cut(s)	168
BstV1I	GCAGC	2 cut(s)	436, 1278
BstV2I	GAAGAC	1 cut(s)	14
BstX2I	RGATCY	1 cut(s)	1358
BstXI	CCANNNNNNTGG	1 cut(s)	155
BstYI	RGATCY	1 cut(s)	1358
BstZ17I	GTATAC	2 cut(s)	288, 1100
BsuRI	GGCC	3 cut(s)	30, 166, 283
BtgZI	GCGATG	1 cut(s)	324
BtsCI	GGATG	4 cut(s)	220, 685, 853, 1172
BtsIMutI	CAGTG	2 cut(s)	31, 966
BveI	ACCTGC	1 cut(s)	1111
Cac8I	GCNNGC	2 cut(s)	805, 1195
CaiI	CAGNNNCTG	1 cut(s)	1346
CfoI	GCGC	1 cut(s)	470
Cfr10I	RCCGGY	1 cut(s)	803
Cfr13I	GGNCC	7 cut(s)	51, 164, 165, 236, 281, 374, 1402
CsiI	ACCWGGT	2 cut(s)	238, 1320
Csp6I	GTAC	6 cut(s)	73, 159, 505, 826, 865, 1325
CviAII	CATG	7 cut(s)	68, 398, 995, 1190, 1198, 1369, 1390
CviQI	GTAC	6 cut(s)	73, 159, 505, 826, 865, 1325
DdeI	CTNAG	5 cut(s)	305, 751, 861, 954, 1339
DpnI	GATC	6 cut(s)	342, 702, 765, 1048, 1202, 1360
DpnII	GATC	6 cut(s)	340, 700, 763, 1046, 1200, 1358
DraI	TTTAAA	1 cut(s)	711
DrdI	GACNNNNNNGTC	1 cut(s)	1265
DseDI	GACNNNNNNGTC	1 cut(s)	1265
EaeI	YGGCCR	1 cut(s)	28
Eam1104I	CTCTTC	3 cut(s)	146, 240, 489
EarI	CTCTTC	3 cut(s)	146, 240, 489
Ecl136II	GAGCTC	1 cut(s)	304
Eco24I	GRGCYC	3 cut(s)	37, 168, 306
Eco47I	GGWCC	4 cut(s)	51, 236, 374, 1402
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	3 cut(s)	312, 1107, 1185
Eco88I	CYCGRG	1 cut(s)	200
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	1 cut(s)	1402
EcoRI	GAATTC	1 cut(s)	1159
EcoRII	CCWGG	4 cut(s)	47, 87, 238, 1320
EcoT22I	ATGCAT	3 cut(s)	69, 127, 1012
EcoT38I	GRGCYC	3 cut(s)	37, 168, 306
FaeI	CATG	7 cut(s)	71, 401, 998, 1193, 1201, 1372, 1393
FatI	CATG	7 cut(s)	67, 397, 994, 1189, 1197, 1368, 1389
FauI	CCCGC	2 cut(s)	735, 1365
FauNDI	CATATG	1 cut(s)	127
FbaI	TGATCA	2 cut(s)	340, 1200
FblI	GTMKAC	2 cut(s)	287, 1099
Fnu4HI	GCNGC	4 cut(s)	450, 1292, 1295, 1336
FokI	GGATG	4 cut(s)	227, 692, 860, 1159
FriOI	GRGCYC	3 cut(s)	37, 168, 306
Fsp4HI	GCNGC	4 cut(s)	450, 1292, 1295, 1336
FspBI	CTAG	1 cut(s)	915
GlaI	GCGC	1 cut(s)	469
GluI	GCNGC	4 cut(s)	450, 1292, 1295, 1336
GsaI	CCCAGC	2 cut(s)	474, 896
HaeII	RGCGCY	1 cut(s)	471
HaeIII	GGCC	3 cut(s)	30, 166, 283
HapII	CCGG	2 cut(s)	162, 804
HhaI	GCGC	1 cut(s)	470
Hin1II	CATG	7 cut(s)	71, 401, 998, 1193, 1201, 1372, 1393
Hin6I	GCGC	1 cut(s)	468
HinP1I	GCGC	1 cut(s)	468
HincII	GTYRAC	1 cut(s)	1270
HindII	GTYRAC	1 cut(s)	1270
HinfI	GANTC	3 cut(s)	670, 878, 1081
HpaII	CCGG	2 cut(s)	162, 804
HphI	GGTGA	3 cut(s)	254, 749, 959
Hpy166II	GTNNAC	4 cut(s)	288, 920, 1100, 1270
Hpy188I	TCNGA	7 cut(s)	345, 571, 1051, 1086, 1126, 1165, 1205
Hpy188III	TCNNGA	5 cut(s)	148, 200, 365, 482, 1432
Hpy8I	GTNNAC	4 cut(s)	288, 920, 1100, 1270
HpyAV	CCTTC	1 cut(s)	1160
HpyCH4III	ACNGT	2 cut(s)	26, 910
HpyCH4V	TGCA	8 cut(s)	67, 125, 452, 461, 539, 1010, 1115, 1145
HpyF10VI	GCNNNNNNNGC	5 cut(s)	458, 467, 998, 1007, 1112
HpyF3I	CTNAG	5 cut(s)	305, 751, 861, 954, 1339
Hsp92II	CATG	7 cut(s)	71, 401, 998, 1193, 1201, 1372, 1393
HspAI	GCGC	1 cut(s)	468
KpnI	GGTACC	2 cut(s)	162, 1328
KroI	GCCGGC	1 cut(s)	803
KroNI	GCCGGC	1 cut(s)	805
Ksp22I	TGATCA	2 cut(s)	340, 1200
Kzo9I	GATC	6 cut(s)	340, 700, 763, 1046, 1200, 1358
LguI	GCTCTTC	1 cut(s)	489
LmnI	GCTCC	4 cut(s)	178, 196, 1111, 1434
Lsp1109I	GCAGC	2 cut(s)	436, 1278
LweI	GCATC	8 cut(s)	112, 436, 832, 988, 997, 1019, 1132, 1181
MabI	ACCWGGT	2 cut(s)	238, 1320
MaeI	CTAG	1 cut(s)	915
MaeIII	GTNAC	2 cut(s)	737, 1306
MalI	GATC	6 cut(s)	342, 702, 765, 1048, 1202, 1360
MboI	GATC	6 cut(s)	340, 700, 763, 1046, 1200, 1358
MfeI	CAATTG	2 cut(s)	55, 330
MflI	RGATCY	1 cut(s)	1358
MhlI	GDGCHC	5 cut(s)	37, 135, 168, 193, 306
MluCI	AATT	8 cut(s)	55, 92, 330, 746, 771, 796, 1040, 1159
MlyI	GAGTC	1 cut(s)	1090
MmeI	TCCRAC	1 cut(s)	1341
Mph1103I	ATGCAT	3 cut(s)	69, 127, 1012
MroNI	GCCGGC	1 cut(s)	803
MroXI	GAANNNNTTC	2 cut(s)	506, 593
MseI	TTAA	2 cut(s)	563, 710
MslI	CAYNNNNRTG	1 cut(s)	1302
MspA1I	CMGCKG	2 cut(s)	276, 1291
MspI	CCGG	2 cut(s)	162, 804
MspR9I	CCNGG	5 cut(s)	49, 89, 163, 240, 1322
MunI	CAATTG	2 cut(s)	55, 330
Mva1269I	GAATGC	1 cut(s)	894
MvaI	CCWGG	4 cut(s)	49, 89, 240, 1322
MwoI	GCNNNNNNNGC	5 cut(s)	458, 467, 998, 1007, 1112
NaeI	GCCGGC	1 cut(s)	805
NciI	CCSGG	1 cut(s)	163
NdeI	CATATG	1 cut(s)	127
NdeII	GATC	6 cut(s)	340, 700, 763, 1046, 1200, 1358
NgoMIV	GCCGGC	1 cut(s)	803
NlaIII	CATG	7 cut(s)	71, 401, 998, 1193, 1201, 1372, 1393
NlaIV	GGNNCC	5 cut(s)	46, 160, 166, 1326, 1403
NmeAIII	GCCGAG	1 cut(s)	56
NmuCI	GTSAC	2 cut(s)	737, 1306
NsiI	ATGCAT	3 cut(s)	69, 127, 1012
PaeR7I	CTCGAG	1 cut(s)	200
PciSI	GCTCTTC	1 cut(s)	489
PctI	GAATGC	1 cut(s)	894
PdiI	GCCGGC	1 cut(s)	805
PdmI	GAANNNNTTC	2 cut(s)	506, 593
PfeI	GAWTC	2 cut(s)	670, 878
PflMI	CCANNNNNTGG	1 cut(s)	94
PkrI	GCNGC	4 cut(s)	451, 1293, 1296, 1337
PleI	GAGTC	1 cut(s)	1089
PpsI	GAGTC	1 cut(s)	1089
PpuMI	RGGWCCY	1 cut(s)	1402
Psp124BI	GAGCTC	1 cut(s)	306
Psp5II	RGGWCCY	1 cut(s)	1402
Psp6I	CCWGG	4 cut(s)	47, 87, 238, 1320
PspFI	CCCAGC	2 cut(s)	470, 892
PspGI	CCWGG	4 cut(s)	47, 87, 238, 1320
PspN4I	GGNNCC	5 cut(s)	46, 160, 166, 1326, 1403
PspOMI	GGGCCC	1 cut(s)	164
PspPI	GGNCC	7 cut(s)	51, 164, 165, 236, 281, 374, 1402
PspPPI	RGGWCCY	1 cut(s)	1402
PstI	CTGCAG	1 cut(s)	463
PstNI	CAGNNNCTG	1 cut(s)	1346
PsuI	RGATCY	1 cut(s)	1358
PvuII	CAGCTG	1 cut(s)	1291
RsaI	GTAC	6 cut(s)	74, 160, 506, 827, 866, 1326
RsaNI	GTAC	6 cut(s)	73, 159, 505, 826, 865, 1325
RseI	CAYNNNNRTG	1 cut(s)	1302
SacI	GAGCTC	1 cut(s)	306
SapI	GCTCTTC	1 cut(s)	489
SaqAI	TTAA	2 cut(s)	563, 710
SatI	GCNGC	4 cut(s)	450, 1292, 1295, 1336
Sau3AI	GATC	6 cut(s)	340, 700, 763, 1046, 1200, 1358
Sau96I	GGNCC	7 cut(s)	51, 164, 165, 236, 281, 374, 1402
ScaI	AGTACT	1 cut(s)	506
SchI	GAGTC	1 cut(s)	1090
ScrFI	CCNGG	5 cut(s)	49, 89, 163, 240, 1322
SduI	GDGCHC	5 cut(s)	37, 135, 168, 193, 306
SexAI	ACCWGGT	2 cut(s)	238, 1320
SfaNI	GCATC	8 cut(s)	112, 436, 832, 988, 997, 1019, 1132, 1181
SfcI	CTRYAG	2 cut(s)	136, 459
Sfr274I	CTCGAG	1 cut(s)	200
SinI	GGWCC	4 cut(s)	51, 236, 374, 1402
SlaI	CTCGAG	1 cut(s)	200
SmiI	ATTTAAAT	1 cut(s)	711
SmiMI	CAYNNNNRTG	1 cut(s)	1302
SmlI	CTYRAG	2 cut(s)	200, 1177
SmoI	CTYRAG	2 cut(s)	200, 1177
Sse9I	AATT	8 cut(s)	55, 92, 330, 746, 771, 796, 1040, 1159
SsiI	CCGC	8 cut(s)	76, 276, 632, 728, 845, 1295, 1335, 1372
SspI	AATATT	2 cut(s)	349, 488
SspMI	CTAG	1 cut(s)	915
SstI	GAGCTC	1 cut(s)	306
StyD4I	CCNGG	5 cut(s)	47, 87, 161, 238, 1320
SwaI	ATTTAAAT	1 cut(s)	711
TaaI	ACNGT	2 cut(s)	26, 910
TaqI	TCGA	3 cut(s)	81, 201, 510
TasI	AATT	8 cut(s)	55, 92, 330, 746, 771, 796, 1040, 1159
TatI	WGTACW	2 cut(s)	504, 864
TauI	GCSGC	2 cut(s)	1297, 1338
TfiI	GAWTC	2 cut(s)	670, 878
Tru1I	TTAA	2 cut(s)	563, 710
Tru9I	TTAA	2 cut(s)	563, 710
TscAI	CASTG	2 cut(s)	31, 973
TseFI	GTSAC	2 cut(s)	737, 1306
TseI	GCWGC	2 cut(s)	449, 1291
Tsp45I	GTSAC	2 cut(s)	737, 1306
TspRI	CASTG	2 cut(s)	31, 973
Van91I	CCANNNNNTGG	1 cut(s)	94
VpaK11BI	GGWCC	4 cut(s)	51, 236, 374, 1402
XapI	RAATTY	3 cut(s)	796, 1040, 1159
XhoI	CTCGAG	1 cut(s)	200
XmiI	GTMKAC	2 cut(s)	287, 1099
XmnI	GAANNNNTTC	2 cut(s)	506, 593
XspI	CTAG	1 cut(s)	915
ZrmI	AGTACT	1 cut(s)	506
Zsp2I	ATGCAT	3 cut(s)	69, 127, 1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.