Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005798

Physical Location & Seq

Genomic Coordinates Forward (+)

10232242 .. 10235640

Gene Structure 3399 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G27640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGAGAGACCACACCGCCCAAAAAATCCAGTATCCCGCCGGATTCAGAGACTCTCCGATGGAATCCTCCAGATCTAGATCCGTCTTCGTCAACATCGGACTCAGAGAACTCAACGGATTTCGAGTACGGAAGAGACCGTTCTTCGCAGACTCCGAGCTGATTTGCAGAGAAATCGCCGGCGTAGCCGTGGAACACGACGGGATTTGGACTCCGCCGTTGGCTGTTTCGTTTTGTAAGACTAGCAGGAATTCGCAATTGTTCGCCGTCTCTGATGAAGACGGCCATGTGAGCTTGTTTAATTCTTCCAGTAAGAAGTTTGCTTCTTCTGCAACTCACCAAGAGAATACAGAGAAAGCTAGATTTCGTGACTGGATTGCTCATTATAATGCTATCTTTGACATTTCTTGGATCAAGGGAGATAGTTGTCTTCTGACTGCTTCTGGTGATCAAACTATTAAAGTATGGGATGTAGAGGAGAATAAGTGTACTGGAGTTCTTATTGGACATACAGGAACTGTAAAATCTATGTGTTCACATCCAACGAATTCTGATCTTCTTGTATCTGGTTCAAGAGATGGATGTTTTGCGTTGTGGGATTTAAGATGTAAAAGTAGCTCTCATAAAGAGGAATTTTGTATCAACTCTACTGGCATGGTTAAAGGAGCTCATCTATCTCCACTTTCAAAACGAATCAGACGTCGCAAGGCTGCTTCGTCAAGCATTACCTCTGTGCTTTATGTCAAGGACGAGATCACAATTGCTACTGCTGGAGCACCTGATAGTGCCTTGAAATTTTGGGATATAAGAAAGCTGAAAGCTCCTTTTGCTCAAGCCTCTCCACAATCAGACCCAACAAATACTAAGGAAAAGAGATCACATGGTATAGTTTCCTTGTCCCAGGACTCAAGTGGAACCTATCTCACAGCATCATGCAAGGACAATAGAATCTATCTATACAACACGCTGCGGCTTGACAAAGGACCTGTACAATCTTTCTCTGGCTGCCGGATAGATTCTTTCTTCGTAAGGACGATGATTAGTCCTGATGGTGAATATGTTTTGAGCGGTTCAAGCGATGGAAACGCTTACATATGGCAGGTCAATAAACCTCAAGTAGATCCTATAATCTTGAAAGGCCATGACTTTGAAGTTACTGCAGTAGATTGGTCTCCATCAGAGATTGGGAAAGTTGCAACAGCTTCAGATGATTTCACGGTACGACTATGGAACATAGAGAACAACATATGTACAAACGCAAACGCAACAGCGTCTGTGTCCAGAGTTAAACGCAGAGTAACCGCATTGTCAAACACTGAAGCCAAAGAAAGACTTGAGATGAACAGAGAAACTGAGAGTCCCCAAAAGCATTCATCATTATCATCAGATGATGATTATAATAATGATCAGTCAATGCCTATCATTAGAACTCCAGAGTCTCAGAAGAAGAAAACATCATCATCATCATCATTGTCATCATTATCATCAGAAGAAGATATAATATGCGAGAGAACACCAGAAACCACATTCAACAGTCCATCCTCTGTACTAAACCCTCCTTCCTCAGTCAAAAGGCGAACCATTAGAGATTATTTTCTCGTCACTCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000077 GO:0000151 GO:0000209 GO:0000731 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005813 GO:0005815 GO:0005856 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006464 GO:0006508 GO:0006511 GO:0006513 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010564 GO:0010948 GO:0015630 GO:0016567 GO:0018130 GO:0019438 GO:0019538 GO:0019941 GO:0019985 GO:0023052 GO:0030163 GO:0031461 GO:0031464 GO:0031465 GO:0031570 GO:0031572 GO:0032446 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0045786 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0051726 GO:0065007 GO:0070647 GO:0071704 GO:0071897 GO:0072395 GO:0072401 GO:0072422 GO:0072425 GO:0080008 GO:0090304 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901987 GO:1901988 GO:1902494 GO:1902749 GO:1902750 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

535

Amino Acids

59.4

Weight (kDa)

8.48

Isoelectric Point (pI)

56.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	74 - 203	2.2e-17	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	74 - 205	1.1e-15	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	74 - 207	2.3e-11	CAF1B/HIR1 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	75 - 201	7.3e-07	TEP-1 second beta-propeller
WD40_Prp19	PF24814	82 - 203	3e-14	Prp19 WD40 domain
WDR55	PF24796	84 - 207	1.3e-07	WDR55
Beta-prop_WDR3_2nd	PF25172	124 - 199	5.7e-07	WDR3 second beta-propeller domain
Beta-prop_Aladin	PF25460	127 - 314	7.8e-07	Aladin seven-bladed propeller
WD40_CDC20-Fz	PF24807	127 - 223	6.5e-10	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	127 - 207	1.3e-14	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	133 - 215	6.6e-09	WDHD1 first WD40 domain
WD40_Gbeta	PF25391	137 - 202	4.4e-09	G protein beta WD-40 repeat protein
WD40	PF00400	161 - 199	1.8e-06	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	230 - 410	9.1e-07	WDR3 second beta-propeller domain
WDR55	PF24796	233 - 369	1e-05	WDR55
WD40_CDC20-Fz	PF24807	235 - 424	2.6e-13	CDC20/Fizzy WD40 domain
WD40_WDHD1_1st	PF24817	237 - 392	1.2e-08	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	287 - 420	7.8e-12	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	345 - 418	7.2e-12	WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	346 - 428	3.1e-07	CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3	PF25174	347 - 422	1.8e-13	THOC3 beta-propeller domain
WD40_Prp19	PF24814	349 - 436	3.5e-09	Prp19 WD40 domain
WD40	PF00400	376 - 410	9.2e-06	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27640 AT3G27640
fragaria_vesca	FvH4_6g51280 FvH4_6g51280 FvH4_6g51280 FvH4_6g51280
malus_domestica	MD09G1027800.v1.1 MD17G1027700.v1.1 MD17G1028200.v1.1
prunus_persica	Prupe.3G290400_v2.0.a1 Prupe.3G291000_v2.0.a1
pyrus_communis	pycom111g02180
rosa_chinensis	RchiOBHm_Chr2g0172901
rosa_laevigata	RLG00000022140
rosa_multiflora	Rmu_co8216202.1_g000001 Rmu_sc0002979.1_g000002 Rmu_sc0013380.1_g000001 Rmu_sc0015618.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079450
rosa_rugosa	Rorug02G0563200 Rorug02G0563400
rosa_samantha	Rh2AG640100 Rh2AG640200 Rh2BG653600 Rh2BG653700 Rh2CG619200 Rh2DG667200
rosa_wichuraiana	Rw2G052840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	384, 1395
AatII	GACGTC	1 cut(s)	700
Acc36I	ACCTGC	1 cut(s)	1087
AccBSI	CCGCTC	1 cut(s)	1065
AciI	CCGC	6 cut(s)	15, 36, 212, 967, 1065, 1299
AclWI	GGATC	3 cut(s)	72, 416, 1112
AcoI	YGGCCR	1 cut(s)	280
AcsI	RAATTY	4 cut(s)	247, 544, 629, 791
AcuI	CTGAAG	2 cut(s)	1185, 1335
AcyI	GRCGYC	1 cut(s)	697
AfaI	GTAC	6 cut(s)	126, 487, 987, 1218, 1249, 1545
AgsI	TTSAA	7 cut(s)	570, 684, 790, 1071, 1132, 1148, 1528
AjnI	CCWGG	1 cut(s)	897
AluBI	AGCT	8 cut(s)	157, 291, 356, 615, 665, 811, 818, 1199
AluI	AGCT	8 cut(s)	157, 291, 356, 615, 665, 811, 818, 1199
Alw21I	GWGCWC	2 cut(s)	667, 775
Alw26I	GTCTC	5 cut(s)	42, 127, 271, 1173, 1440
AlwI	GGATC	3 cut(s)	72, 416, 1112
AlwNI	CAGNNNCTG	2 cut(s)	515, 1271
AoxI	GGCC	2 cut(s)	280, 1135
ApeKI	GCWGC	3 cut(s)	707, 964, 1002
ApoI	RAATTY	4 cut(s)	247, 544, 629, 791
ArsI	GACNNNNNNTTYG	2 cut(s)	682, 714
AspS9I	GGNCC	1 cut(s)	980
AsuHPI	GGTGA	3 cut(s)	326, 455, 1061
AvaII	GGWCC	1 cut(s)	980
BanII	GRGCYC	1 cut(s)	667
BbsI	GAAGAC	3 cut(s)	76, 282, 419
Bbv12I	GWGCWC	2 cut(s)	667, 775
BbvI	GCAGC	3 cut(s)	694, 951, 989
BccI	CCATC	6 cut(s)	52, 569, 1040, 1070, 1180, 1543
BceAI	ACGGC	4 cut(s)	170, 199, 248, 295
BcgI	CGANNNNNNTGC	2 cut(s)	154, 188
BciT130I	CCWGG	1 cut(s)	899
BciVI	GTATCC	1 cut(s)	42
BclI	TGATCA	2 cut(s)	445, 1402
BcoDI	GTCTC	5 cut(s)	42, 127, 271, 1173, 1440
BfaI	CTAG	3 cut(s)	75, 240, 357
BfmI	CTRYAG	1 cut(s)	1155
BfuAI	ACCTGC	1 cut(s)	1087
BfuI	GTATCC	1 cut(s)	42
BglII	AGATCT	1 cut(s)	71
BisI	GCNGC	4 cut(s)	708, 965, 968, 1003
BlsI	GCNGC	4 cut(s)	709, 966, 969, 1004
Bme1390I	CCNGG	1 cut(s)	899
Bme18I	GGWCC	1 cut(s)	980
BmgT120I	GGNCC	1 cut(s)	980
BmiI	GGNNCC	1 cut(s)	913
BmrFI	CCNGG	1 cut(s)	899
BmsI	GCATC	1 cut(s)	935
BpiI	GAAGAC	3 cut(s)	76, 282, 419
BpmI	CTGGAG	4 cut(s)	52, 510, 789, 1413
BpuEI	CTTGAG	4 cut(s)	813, 889, 1095, 1352
BsaBI	GATNNNNATC	1 cut(s)	76
BsaHI	GRCGYC	1 cut(s)	697
BsaI	GGTCTC	2 cut(s)	127, 1173
BsaJI	CCNNGG	2 cut(s)	186, 897
BsaXI	ACNNNNNCTCC	2 cut(s)	467, 497
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	5 cut(s)	28, 306, 374, 493, 652
Bse8I	GATNNNNATC	1 cut(s)	76
BseBI	CCWGG	1 cut(s)	899
BseDI	CCNNGG	2 cut(s)	186, 897
BseGI	GGATG	4 cut(s)	472, 535, 584, 1535
BseJI	GATNNNNATC	1 cut(s)	76
BseMII	CTCAG	4 cut(s)	115, 1341, 1451, 1575
BseNI	ACTGG	5 cut(s)	28, 306, 374, 493, 652
BseRI	GAGGAG	1 cut(s)	488
BseXI	GCAGC	3 cut(s)	694, 951, 989
BshFI	GGCC	2 cut(s)	282, 1137
BsiHKAI	GWGCWC	2 cut(s)	667, 775
BsiSI	CCGG	3 cut(s)	39, 177, 1006
BslFI	GGGAC	2 cut(s)	880, 1341
BsmAI	GTCTC	5 cut(s)	42, 127, 271, 1173, 1440
BsmBI	CGTCTC	1 cut(s)	271
BsmFI	GGGAC	2 cut(s)	880, 1341
BsmI	GAATGC	1 cut(s)	1366
BsnI	GGCC	2 cut(s)	282, 1137
Bso31I	GGTCTC	2 cut(s)	127, 1173
Bsp1286I	GDGCHC	2 cut(s)	667, 775
Bsp1407I	TGTACA	2 cut(s)	985, 1247
Bsp143I	GATC	9 cut(s)	71, 77, 408, 445, 550, 750, 872, 1117, 1402
BspACI	CCGC	6 cut(s)	15, 36, 212, 967, 1065, 1299
BspANI	GGCC	2 cut(s)	282, 1137
BspCNI	CTCAG	4 cut(s)	114, 1342, 1450, 1574
BspLI	GGNNCC	1 cut(s)	913
BspMAI	CTGCAG	1 cut(s)	1159
BspMI	ACCTGC	1 cut(s)	1087
BspPI	GGATC	3 cut(s)	72, 416, 1112
BspTNI	GGTCTC	2 cut(s)	127, 1173
BsrBI	CCGCTC	1 cut(s)	1065
BsrFI	RCCGGY	1 cut(s)	176
BsrGI	TGTACA	2 cut(s)	985, 1247
BsrI	ACTGG	5 cut(s)	28, 306, 374, 493, 652
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	2 cut(s)	186, 897
BssMI	GATC	9 cut(s)	71, 77, 408, 445, 550, 750, 872, 1117, 1402
BssNI	GRCGYC	1 cut(s)	697
Bst2UI	CCWGG	1 cut(s)	899
Bst4CI	ACNGT	4 cut(s)	138, 517, 1216, 1532
Bst6I	CTCTTC	1 cut(s)	125
BstACI	GRCGYC	1 cut(s)	697
BstAUI	TGTACA	2 cut(s)	985, 1247
BstC8I	GCNNGC	1 cut(s)	178
BstDEI	CTNAG	5 cut(s)	101, 861, 1350, 1437, 1561
BstDSI	CCRYGG	1 cut(s)	186
BstF5I	GGATG	4 cut(s)	472, 535, 584, 1535
BstKTI	GATC	9 cut(s)	74, 80, 411, 448, 553, 753, 875, 1120, 1405
BstMAI	GTCTC	5 cut(s)	42, 127, 271, 1173, 1440
BstMBI	GATC	9 cut(s)	71, 77, 408, 445, 550, 750, 872, 1117, 1402
BstMWI	GCNNNNNNNGC	5 cut(s)	182, 288, 326, 824, 1071
BstNI	CCWGG	1 cut(s)	899
BstSCI	CCNGG	1 cut(s)	897
BstSFI	CTRYAG	1 cut(s)	1155
BstV1I	GCAGC	3 cut(s)	694, 951, 989
BstV2I	GAAGAC	3 cut(s)	76, 282, 419
BstX2I	RGATCY	3 cut(s)	71, 77, 1117
BstYI	RGATCY	3 cut(s)	71, 77, 1117
BsuI	GTATCC	1 cut(s)	42
BsuRI	GGCC	2 cut(s)	282, 1137
BtgI	CCRYGG	1 cut(s)	186
BtgZI	GCGATG	1 cut(s)	1089
BtsCI	GGATG	4 cut(s)	472, 535, 584, 1535
BtsIMutI	CAGTG	1 cut(s)	1311
BveI	ACCTGC	1 cut(s)	1087
Cac8I	GCNNGC	1 cut(s)	178
CaiI	CAGNNNCTG	2 cut(s)	515, 1271
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	1 cut(s)	980
CseI	GACGC	1 cut(s)	1257
Csp6I	GTAC	6 cut(s)	125, 486, 986, 1217, 1248, 1544
CviAII	CATG	5 cut(s)	284, 652, 878, 930, 1139
CviQI	GTAC	6 cut(s)	125, 486, 986, 1217, 1248, 1544
DdeI	CTNAG	5 cut(s)	101, 861, 1350, 1437, 1561
DpnI	GATC	9 cut(s)	73, 79, 410, 447, 552, 752, 874, 1119, 1404
DpnII	GATC	9 cut(s)	71, 77, 408, 445, 550, 750, 872, 1117, 1402
EaeI	YGGCCR	1 cut(s)	280
Eam1104I	CTCTTC	1 cut(s)	125
EarI	CTCTTC	1 cut(s)	125
EciI	GGCGGA	1 cut(s)	201
Ecl136II	GAGCTC	1 cut(s)	665
Eco24I	GRGCYC	1 cut(s)	667
Eco31I	GGTCTC	2 cut(s)	127, 1173
Eco47I	GGWCC	1 cut(s)	980
Eco53kI	GAGCTC	1 cut(s)	665
Eco57I	CTGAAG	2 cut(s)	1185, 1335
EcoICRI	GAGCTC	1 cut(s)	665
EcoO109I	RGGNCCY	1 cut(s)	980
EcoRI	GAATTC	2 cut(s)	247, 544
EcoRII	CCWGG	1 cut(s)	897
EcoT38I	GRGCYC	1 cut(s)	667
Esp3I	CGTCTC	1 cut(s)	271
FaeI	CATG	5 cut(s)	287, 655, 881, 933, 1142
FalI	AAGNNNNNCTT	2 cut(s)	1314, 1346
FaqI	GGGAC	2 cut(s)	880, 1341
FatI	CATG	5 cut(s)	283, 651, 877, 929, 1138
FauI	CCCGC	1 cut(s)	43
FauNDI	CATATG	2 cut(s)	1091, 1244
FbaI	TGATCA	2 cut(s)	445, 1402
Fnu4HI	GCNGC	4 cut(s)	708, 965, 968, 1003
FokI	GGATG	4 cut(s)	479, 522, 591, 1522
FriOI	GRGCYC	1 cut(s)	667
Fsp4HI	GCNGC	4 cut(s)	708, 965, 968, 1003
FspBI	CTAG	3 cut(s)	75, 240, 357
GluI	GCNGC	4 cut(s)	708, 965, 968, 1003
GsuI	CTGGAG	4 cut(s)	52, 510, 789, 1413
HaeIII	GGCC	2 cut(s)	282, 1137
HapII	CCGG	3 cut(s)	39, 177, 1006
HgaI	GACGC	1 cut(s)	1257
Hin1I	GRCGYC	1 cut(s)	697
Hin1II	CATG	5 cut(s)	287, 655, 881, 933, 1142
HincII	GTYRAC	1 cut(s)	91
HindII	GTYRAC	1 cut(s)	91
HpaII	CCGG	3 cut(s)	39, 177, 1006
HphI	GGTGA	3 cut(s)	326, 455, 1061
Hpy166II	GTNNAC	3 cut(s)	91, 486, 533
Hpy188III	TCNNGA	8 cut(s)	69, 75, 365, 570, 1043, 1129, 1278, 1430
Hpy8I	GTNNAC	3 cut(s)	91, 486, 533
Hpy99I	CGWCG	2 cut(s)	200, 702
HpyAV	CCTTC	1 cut(s)	1566
HpyCH4III	ACNGT	4 cut(s)	138, 517, 1216, 1532
HpyCH4IV	ACGT	1 cut(s)	697
HpyCH4V	TGCA	5 cut(s)	165, 329, 933, 1157, 1193
HpyF10VI	GCNNNNNNNGC	5 cut(s)	182, 288, 326, 824, 1071
HpyF3I	CTNAG	5 cut(s)	101, 861, 1350, 1437, 1561
HpySE526I	ACGT	1 cut(s)	697
Hsp92I	GRCGYC	1 cut(s)	697
Hsp92II	CATG	5 cut(s)	287, 655, 881, 933, 1142
KroI	GCCGGC	1 cut(s)	176
KroNI	GCCGGC	1 cut(s)	178
Ksp22I	TGATCA	2 cut(s)	445, 1402
Kzo9I	GATC	9 cut(s)	71, 77, 408, 445, 550, 750, 872, 1117, 1402
LmnI	GCTCC	3 cut(s)	662, 770, 823
Lsp1109I	GCAGC	3 cut(s)	694, 951, 989
LweI	GCATC	1 cut(s)	935
MaeI	CTAG	3 cut(s)	75, 240, 357
MaeII	ACGT	1 cut(s)	697
MaeIII	GTNAC	4 cut(s)	365, 1150, 1294, 1597
MalI	GATC	9 cut(s)	73, 79, 410, 447, 552, 752, 874, 1119, 1404
MbiI	CCGCTC	1 cut(s)	1065
MboI	GATC	9 cut(s)	71, 77, 408, 445, 550, 750, 872, 1117, 1402
MfeI	CAATTG	2 cut(s)	254, 756
MflI	RGATCY	3 cut(s)	71, 77, 1117
MhlI	GDGCHC	2 cut(s)	667, 775
MluCI	AATT	7 cut(s)	247, 254, 298, 544, 629, 756, 791
MlyI	GAGTC	7 cut(s)	44, 93, 143, 202, 896, 1363, 1442
MmeI	TCCRAC	1 cut(s)	563
MnlI	CCTC	9 cut(s)	76, 466, 619, 736, 844, 1119, 1549, 1563, 1570
MreI	CGCCGGCG	1 cut(s)	176
MroNI	GCCGGC	1 cut(s)	176
MseI	TTAA	5 cut(s)	297, 456, 599, 657, 1284
MslI	CAYNNNNRTG	1 cut(s)	384
MspI	CCGG	3 cut(s)	39, 177, 1006
MspR9I	CCNGG	1 cut(s)	899
MunI	CAATTG	2 cut(s)	254, 756
Mva1269I	GAATGC	1 cut(s)	1366
MvaI	CCWGG	1 cut(s)	899
MwoI	GCNNNNNNNGC	5 cut(s)	182, 288, 326, 824, 1071
NaeI	GCCGGC	1 cut(s)	178
NdeI	CATATG	2 cut(s)	1091, 1244
NdeII	GATC	9 cut(s)	71, 77, 408, 445, 550, 750, 872, 1117, 1402
NgoMIV	GCCGGC	1 cut(s)	176
NlaIII	CATG	5 cut(s)	287, 655, 881, 933, 1142
NlaIV	GGNNCC	1 cut(s)	913
NmuCI	GTSAC	2 cut(s)	365, 1597
PcsI	WCGNNNNNNNCGW	2 cut(s)	150, 694
PctI	GAATGC	1 cut(s)	1366
PdiI	GCCGGC	1 cut(s)	178
PfeI	GAWTC	5 cut(s)	42, 62, 690, 945, 1013
PkrI	GCNGC	4 cut(s)	709, 966, 969, 1004
PleI	GAGTC	7 cut(s)	44, 93, 143, 202, 896, 1362, 1441
PpsI	GAGTC	7 cut(s)	44, 93, 143, 202, 896, 1362, 1441
PpuMI	RGGWCCY	1 cut(s)	980
PsiI	TTATAA	2 cut(s)	384, 1395
Psp124BI	GAGCTC	1 cut(s)	667
Psp5II	RGGWCCY	1 cut(s)	980
Psp6I	CCWGG	1 cut(s)	897
PspGI	CCWGG	1 cut(s)	897
PspN4I	GGNNCC	1 cut(s)	913
PspPI	GGNCC	1 cut(s)	980
PspPPI	RGGWCCY	1 cut(s)	980
PstI	CTGCAG	1 cut(s)	1159
PstNI	CAGNNNCTG	2 cut(s)	515, 1271
PsuI	RGATCY	3 cut(s)	71, 77, 1117
RsaI	GTAC	6 cut(s)	126, 487, 987, 1218, 1249, 1545
RsaNI	GTAC	6 cut(s)	125, 486, 986, 1217, 1248, 1544
RseI	CAYNNNNRTG	1 cut(s)	384
SacI	GAGCTC	1 cut(s)	667
SaqAI	TTAA	5 cut(s)	297, 456, 599, 657, 1284
SatI	GCNGC	4 cut(s)	708, 965, 968, 1003
Sau3AI	GATC	9 cut(s)	71, 77, 408, 445, 550, 750, 872, 1117, 1402
Sau96I	GGNCC	1 cut(s)	980
SchI	GAGTC	7 cut(s)	44, 93, 143, 202, 896, 1363, 1442
ScrFI	CCNGG	1 cut(s)	899
SduI	GDGCHC	2 cut(s)	667, 775
SfaNI	GCATC	1 cut(s)	935
SfcI	CTRYAG	1 cut(s)	1155
SgrAI	CRCCGGYG	1 cut(s)	176
SinI	GGWCC	1 cut(s)	980
SmiMI	CAYNNNNRTG	1 cut(s)	384
SmlI	CTYRAG	4 cut(s)	828, 904, 1110, 1331
SmoI	CTYRAG	4 cut(s)	828, 904, 1110, 1331
Sse9I	AATT	7 cut(s)	247, 254, 298, 544, 629, 756, 791
SsiI	CCGC	6 cut(s)	15, 36, 212, 967, 1065, 1299
SspMI	CTAG	3 cut(s)	75, 240, 357
SstI	GAGCTC	1 cut(s)	667
StyD4I	CCNGG	1 cut(s)	897
TaaI	ACNGT	4 cut(s)	138, 517, 1216, 1532
TaiI	ACGT	1 cut(s)	700
TaqI	TCGA	1 cut(s)	121
TasI	AATT	7 cut(s)	247, 254, 298, 544, 629, 756, 791
TatI	WGTACW	4 cut(s)	485, 985, 1247, 1543
TauI	GCSGC	1 cut(s)	970
TfiI	GAWTC	5 cut(s)	42, 62, 690, 945, 1013
Tru1I	TTAA	5 cut(s)	297, 456, 599, 657, 1284
Tru9I	TTAA	5 cut(s)	297, 456, 599, 657, 1284
TscAI	CASTG	1 cut(s)	1318
TseFI	GTSAC	2 cut(s)	365, 1597
TseI	GCWGC	3 cut(s)	707, 964, 1002
Tsp45I	GTSAC	2 cut(s)	365, 1597
TspDTI	ATGAA	3 cut(s)	288, 1352, 1359
TspGWI	ACGGA	3 cut(s)	70, 129, 142
TspRI	CASTG	1 cut(s)	1318
VpaK11BI	GGWCC	1 cut(s)	980
XapI	RAATTY	4 cut(s)	247, 544, 629, 791
XbaI	TCTAGA	1 cut(s)	74
XcmI	CCANNNNNNNNNTGG	1 cut(s)	905
XspI	CTAG	3 cut(s)	75, 240, 357
ZraI	GACGTC	1 cut(s)	698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.